CmoCh01G001260 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G001260
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionAuxin-responsive protein
LocationCmo_Chr01: 547621 .. 548429 (+)
RNA-Seq ExpressionCmoCh01G001260
SyntenyCmoCh01G001260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACTGAGGGATTAGGCCTCGAAATCACCGAGCTCCGTCTAGGACCGATTCCGGCGAGCAAAAACAATGAGAAGAAAAGGGTTTTCTCGGAGGTGGAAGTGGAAGACAAGAGTGACGGCGGAGGGCGGAAGCAGGTGGTGGGGTGGCCGCCGGTGTGCTCGTACCGGCGGAGGAACAGCTTGAGGGAGAAGGAAGAAAGTGAAGGAGTAATGGGGGGGAGGAAAAAGATGTACGTGAAAGTGAGGGTTGAAGGAGAGGCATTTGTGAGGAAAGTTGATTTGGGAATGGTGAAGGGATATGGGGAACTTGTTGATGCAGTGGAGAAGCTTTTTGGGACCCCAATTGGGTGTTCTCATTGTACTATCACTTACGAAGATAGAGATGGAGATTGGATGCTCGTTGGTGATGTGCCTTGGAAGTATGTCAAACCCTAAACCCTAAACTCTTTTGTATTTGATTATATTTGTTGTAATCATGATTTAGGATCTAATGAATGTGCAGGATGTTCATTGAATCATGCAAGAGATTGAGGATAATCAAGAAATCTAGTTCATAAGCCAATAGAGAGGTTGTTGAAGGGAGCTGAATAACCAAGTATCAAGGGATCAGGAGCTCATCGATCACCAACATTTCTTTAGATCCAATCTTCCCTTTTATCTTGTTCTTGTTTAAATATGATTTTATTTTGGTACAAATATTTCAGATATTTGAGTTGCTATAACATATTAGTAAAGTTGATGAATATTGTAATGAAATAGGATTGGGAAGTTTTTCTTTTTCAAGTCATTCCAACCATCATTTGTTG

mRNA sequence

ATGGCAACTGAGGGATTAGGCCTCGAAATCACCGAGCTCCGTCTAGGACCGATTCCGGCGAGCAAAAACAATGAGAAGAAAAGGGTTTTCTCGGAGGTGGAAGTGGAAGACAAGAGTGACGGCGGAGGGCGGAAGCAGGTGGTGGGGTGGCCGCCGGTGTGCTCGTACCGGCGGAGGAACAGCTTGAGGGAGAAGGAAGAAAGTGAAGGAGTAATGGGGGGGAGGAAAAAGATGTACGTGAAAGTGAGGGTTGAAGGAGAGGCATTTGTGAGGAAAGTTGATTTGGGAATGGTGAAGGGATATGGGGAACTTGTTGATGCAGTGGAGAAGCTTTTTGGGACCCCAATTGGGTGTTCTCATTGTACTATCACTTACGAAGATAGAGATGGAGATTGGATGCTCGTTGGTGATGTGCCTTGGAAGATGTTCATTGAATCATGCAAGAGATTGAGGATAATCAAGAAATCTAGTTCATAAGCCAATAGAGAGGTTGTTGAAGGGAGCTGAATAACCAAGTATCAAGGGATCAGGAGCTCATCGATCACCAACATTTCTTTAGATCCAATCTTCCCTTTTATCTTGTTCTTGTTTAAATATGATTTTATTTTGGTACAAATATTTCAGATATTTGAGTTGCTATAACATATTAGTAAAGTTGATGAATATTGTAATGAAATAGGATTGGGAAGTTTTTCTTTTTCAAGTCATTCCAACCATCATTTGTTG

Coding sequence (CDS)

ATGGCAACTGAGGGATTAGGCCTCGAAATCACCGAGCTCCGTCTAGGACCGATTCCGGCGAGCAAAAACAATGAGAAGAAAAGGGTTTTCTCGGAGGTGGAAGTGGAAGACAAGAGTGACGGCGGAGGGCGGAAGCAGGTGGTGGGGTGGCCGCCGGTGTGCTCGTACCGGCGGAGGAACAGCTTGAGGGAGAAGGAAGAAAGTGAAGGAGTAATGGGGGGGAGGAAAAAGATGTACGTGAAAGTGAGGGTTGAAGGAGAGGCATTTGTGAGGAAAGTTGATTTGGGAATGGTGAAGGGATATGGGGAACTTGTTGATGCAGTGGAGAAGCTTTTTGGGACCCCAATTGGGTGTTCTCATTGTACTATCACTTACGAAGATAGAGATGGAGATTGGATGCTCGTTGGTGATGTGCCTTGGAAGATGTTCATTGAATCATGCAAGAGATTGAGGATAATCAAGAAATCTAGTTCATAA

Protein sequence

MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRNSLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSHCTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS
Homology
[Close]
BLAST of CmoCh01G001260 vs. ExPASy Swiss-Prot
Match: P13088 (Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.7e-42
Identity = 98/185 (52.97%), Postives = 119/185 (64.32%), Query Frame = 0 

Query: 1   MATEGLGLEITELRLGPIPA-------SKNNEKKRVFSEVE----VEDKSDGGG------ 60
           MA EGLGLEITELRLG   A       +K NEKKR FSE++     E+ S GGG      
Sbjct: 1   MAKEGLGLEITELRLGLPDAEHQVSVVNKKNEKKRAFSEIDDGVGDENSSSGGGDRKMET 60

Query: 61  -RKQVVGWPPVCSYRRRNSLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYG 120
            + QVVGWPPVCSYR++NS+ E         G  KMYVKV ++G  F+RK+DLG+ KGY 
Sbjct: 61  NKSQVVGWPPVCSYRKKNSMNE---------GASKMYVKVSMDGAPFLRKIDLGLHKGYS 120

Query: 121 ELVDAVEKLFG---------TPIGCSHCTITYEDRDGDWMLVGDVPWKMFIESCKRLRII 159
           +L  A++KLFG               H  I YED+DGDWMLVGDVPW+MF+ESCKRLRI+
Sbjct: 121 DLALALDKLFGCYGMVEALKNADNSEHVPI-YEDKDGDWMLVGDVPWEMFMESCKRLRIM 175

[Close]
BLAST of CmoCh01G001260 vs. ExPASy Swiss-Prot
Match: P32293 (Auxin-induced protein 22A OS=Vigna radiata var. radiata OX=3916 GN=AUX22A PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.4e-40
Identity = 99/186 (53.23%), Postives = 121/186 (65.05%), Query Frame = 0 

Query: 1   MATEGLGLEITELRLGPIP-------ASKNNEK--KRVFSEVE---VEDKSDGGG----- 60
           MA EGLGLEITELRLG +P       A+KN EK  KRVFSE++    E+ S GGG     
Sbjct: 1   MAKEGLGLEITELRLG-LPDAEHVAVANKNGEKKNKRVFSEIDDVGDENSSSGGGGDRKM 60

Query: 61  --RKQVVGWPPVCSYRRRNSLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGY 120
             + QVVGWPPVCSYR++NS+ E            KMYVKV ++G  F+RK+DLGM KGY
Sbjct: 61  ENKNQVVGWPPVCSYRKKNSVNE----------ASKMYVKVSMDGAPFLRKMDLGMHKGY 120

Query: 121 GELVDAVEKLFG---------TPIGCSHCTITYEDRDGDWMLVGDVPWKMFIESCKRLRI 159
            +L  A+EKLFG               H  I YED+DGDWMLVGDVPW+MF+ESCKRLRI
Sbjct: 121 SDLAFALEKLFGCYGMVEALKNVENGEHVPI-YEDKDGDWMLVGDVPWEMFMESCKRLRI 174

[Close]
BLAST of CmoCh01G001260 vs. ExPASy Swiss-Prot
Match: P49680 (Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.2e-39
Identity = 94/176 (53.41%), Postives = 113/176 (64.20%), Query Frame = 0 

Query: 1   MATEGLGLEITELRLG-PIPASKNNEKKRVFSEVE--VEDKSDGGGRK------QVVGWP 60
           MA EGLGLEITELRLG      K NEKKR+FSE++  VE+    G RK      QVVGWP
Sbjct: 1   MAREGLGLEITELRLGLSCGEPKKNEKKRMFSEIDGGVEENGGSGDRKSVDKKNQVVGWP 60

Query: 61  PVCSYRRRNSLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKL 120
           PVCSYR++N           M    KMY+KV ++G  ++RK+DL + KGY EL  A+EKL
Sbjct: 61  PVCSYRKKN-----------MNEGSKMYMKVSMDGAPYLRKIDLCLHKGYLELALALEKL 120

Query: 121 FG---------TPIGCSHCTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 159
           F              C H  I YED+DGDWMLVGDVPW+MFIESCKRLRI+K+S +
Sbjct: 121 FDCCGIEEALKDAENCEHVPI-YEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDA 164

[Close]
BLAST of CmoCh01G001260 vs. ExPASy Swiss-Prot
Match: O24541 (Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.5e-37
Identity = 91/181 (50.28%), Postives = 115/181 (63.54%), Query Frame = 0 

Query: 1   MATEGLGLEITELRLGPIPAS---------KNNEKKRVFSEVEVED-KSDGGGRK----Q 60
           M  E LGLEITELRLG +P +         KN  KKRVFS++E E+  S+  G+K    Q
Sbjct: 1   MEKEDLGLEITELRLG-LPGAGGENNTDKDKNKNKKRVFSDIEGENSSSEEDGKKETKNQ 60

Query: 61  VVGWPPVCSYRRRNSLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVD 120
           VVGWPPVCSYR++N++ E            K+YVKV ++G  F+RK+DL M KGY +L  
Sbjct: 61  VVGWPPVCSYRKKNTVNE-----------PKLYVKVSMDGAPFLRKIDLAMHKGYSDLAF 120

Query: 121 AVEKLFGTPIGC---------SHCTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSS 159
           A++K FG    C          H  I YED+DGDWMLVGDVPW+MF ESCKRLRI+K+S 
Sbjct: 121 ALDKFFGCYGICEALKDAENAEHVPI-YEDKDGDWMLVGDVPWEMFRESCKRLRIMKRSD 168

[Close]
BLAST of CmoCh01G001260 vs. ExPASy Swiss-Prot
Match: P33078 (Auxin-responsive protein IAA5 OS=Arabidopsis thaliana OX=3702 GN=IAA5 PE=1 SV=3)

HSP 1 Score: 153.3 bits (386), Expect = 2.3e-36
Identity = 83/165 (50.30%), Postives = 103/165 (62.42%), Query Frame = 0 

Query: 3   TEGLGLEITELRLG-----PIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYR 62
           +  LGLEITELRLG      +     + KKR   EVE++ K +   + QVVGWPPVCSYR
Sbjct: 5   SNNLGLEITELRLGLPGDIVVSGESISGKKRASPEVEIDLKCEPAKKSQVVGWPPVCSYR 64

Query: 63  RRNSLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIG 122
           R+NSL   + S          YVKV V+G AF+RK+DL M K Y +L  A++ LFG  I 
Sbjct: 65  RKNSLERTKSS----------YVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYIN 124

Query: 123 C------SHCTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKS 157
                  S C   YED+DGDWML GDVPW+MF+ SCKRLRI+K+S
Sbjct: 125 FDDTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRS 159

[Close]
BLAST of CmoCh01G001260 vs. ExPASy TrEMBL
Match: A0A6J1GBF3 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111452634 PE=3 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.2e-85
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 

Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60

Query: 61  SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH 120
           SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH
Sbjct: 61  SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH 120

Query: 121 CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 159
           CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS
Sbjct: 121 CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 158

[Close]
BLAST of CmoCh01G001260 vs. ExPASy TrEMBL
Match: A0A6J1KF83 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492708 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.6e-83
Identity = 154/158 (97.47%), Postives = 156/158 (98.73%), Query Frame = 0 

Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60

Query: 61  SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH 120
           SLREKEESEG+M GRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDA+EKLFGTPIGCS 
Sbjct: 61  SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE 120

Query: 121 CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 159
           CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS
Sbjct: 121 CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 158

[Close]
BLAST of CmoCh01G001260 vs. ExPASy TrEMBL
Match: A0A6J1GBF6 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111452634 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.0e-76
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60

Query: 61  SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH 120
           SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH
Sbjct: 61  SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH 120

Query: 121 CTITYEDRDGDWMLVGDVPWKM 143
           CTITYEDRDGDWMLVGDVPWK+
Sbjct: 121 CTITYEDRDGDWMLVGDVPWKI 142

[Close]
BLAST of CmoCh01G001260 vs. ExPASy TrEMBL
Match: A0A6J1KCT2 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492708 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 8.4e-74
Identity = 137/142 (96.48%), Postives = 140/142 (98.59%), Query Frame = 0 

Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60

Query: 61  SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH 120
           SLREKEESEG+M GRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDA+EKLFGTPIGCS 
Sbjct: 61  SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE 120

Query: 121 CTITYEDRDGDWMLVGDVPWKM 143
           CTITYEDRDGDWMLVGDVPWK+
Sbjct: 121 CTITYEDRDGDWMLVGDVPWKI 142

[Close]
BLAST of CmoCh01G001260 vs. ExPASy TrEMBL
Match: A0A5D3DA37 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00040 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 123/172 (71.51%), Postives = 137/172 (79.65%), Query Frame = 0 

Query: 1   MATEGLGLEITELRLG-------PIPASKNNEKKRVFSEVEVEDKS-----DGGGRKQVV 60
           MA +GL LEITELRLG        I  SKNNEKKRVFSEVEVEDKS     D G RKQVV
Sbjct: 4   MAAKGLDLEITELRLGLPGDCGSLISTSKNNEKKRVFSEVEVEDKSRAKGEDEGRRKQVV 63

Query: 61  GWPPVCSYRRRNSLREKE--ESEGV--MGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGEL 120
           GWPPVCSYR+R+S + K   ESEG+  MG +K+MYVKV  EG  F+RKVDLGMVKGYG+L
Sbjct: 64  GWPPVCSYRQRSSFKGKGECESEGIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKGYGDL 123

Query: 121 VDAVEKLFGTPIGCSHCTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKS 157
           V A+EKLFG+PIGC   T+TYEDRDGDWMLVGDVPWKMFIESCKRLRI+KK+
Sbjct: 124 VGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIESCKRLRIMKKT 175

[Close]
BLAST of CmoCh01G001260 vs. NCBI nr
Match: XP_022949217.1 (auxin-induced protein AUX22-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 325.5 bits (833), Expect = 2.6e-85
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 

Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60

Query: 61  SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH 120
           SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH
Sbjct: 61  SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH 120

Query: 121 CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 159
           CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS
Sbjct: 121 CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 158

[Close]
BLAST of CmoCh01G001260 vs. NCBI nr
Match: KAG7036487.1 (Auxin-induced protein 22A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.9 bits (829), Expect = 7.5e-85
Identity = 156/158 (98.73%), Postives = 158/158 (100.00%), Query Frame = 0 

Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 177 MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 236

Query: 61  SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH 120
           SLREKEESEG+MGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDA+EKLFGTPIGCSH
Sbjct: 237 SLREKEESEGIMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSH 296

Query: 121 CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 159
           CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS
Sbjct: 297 CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 334

[Close]
BLAST of CmoCh01G001260 vs. NCBI nr
Match: KAG6606774.1 (Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323.9 bits (829), Expect = 7.5e-85
Identity = 156/158 (98.73%), Postives = 158/158 (100.00%), Query Frame = 0 

Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60

Query: 61  SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH 120
           SLREKEESEG+MGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDA+EKLFGTPIGCSH
Sbjct: 61  SLREKEESEGIMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSH 120

Query: 121 CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 159
           CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS
Sbjct: 121 CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 158

[Close]
BLAST of CmoCh01G001260 vs. NCBI nr
Match: XP_022997883.1 (auxin-induced protein AUX22-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 317.8 bits (813), Expect = 5.4e-83
Identity = 154/158 (97.47%), Postives = 156/158 (98.73%), Query Frame = 0 

Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60

Query: 61  SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH 120
           SLREKEESEG+M GRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDA+EKLFGTPIGCS 
Sbjct: 61  SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE 120

Query: 121 CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 159
           CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS
Sbjct: 121 CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 158

[Close]
BLAST of CmoCh01G001260 vs. NCBI nr
Match: XP_023525675.1 (auxin-induced protein AUX22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317.4 bits (812), Expect = 7.0e-83
Identity = 153/158 (96.84%), Postives = 155/158 (98.10%), Query Frame = 0 

Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60

Query: 61  SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH 120
           S REKEE EG+MGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDA+EKLFGTPIGCS 
Sbjct: 61  SFREKEECEGIMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSQ 120

Query: 121 CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 159
           CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS
Sbjct: 121 CTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKSSS 158

[Close]
BLAST of CmoCh01G001260 vs. TAIR 10
Match: AT1G15580.1 (indole-3-acetic acid inducible 5 )

HSP 1 Score: 153.3 bits (386), Expect = 1.6e-37
Identity = 83/165 (50.30%), Postives = 103/165 (62.42%), Query Frame = 0 

Query: 3   TEGLGLEITELRLG-----PIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYR 62
           +  LGLEITELRLG      +     + KKR   EVE++ K +   + QVVGWPPVCSYR
Sbjct: 5   SNNLGLEITELRLGLPGDIVVSGESISGKKRASPEVEIDLKCEPAKKSQVVGWPPVCSYR 64

Query: 63  RRNSLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIG 122
           R+NSL   + S          YVKV V+G AF+RK+DL M K Y +L  A++ LFG  I 
Sbjct: 65  RKNSLERTKSS----------YVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYIN 124

Query: 123 C------SHCTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKS 157
                  S C   YED+DGDWML GDVPW+MF+ SCKRLRI+K+S
Sbjct: 125 FDDTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRS 159

[Close]
BLAST of CmoCh01G001260 vs. TAIR 10
Match: AT3G15540.1 (indole-3-acetic acid inducible 19 )

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-35
Identity = 88/192 (45.83%), Postives = 116/192 (60.42%), Query Frame = 0 

Query: 1   MATEGLGLEITELRLGPIP---ASKNNEKKRVFSEVEVEDK------------SDGG--- 60
           M  EGLGLEITELRLG +P    ++   KKR F+E+ +               S GG   
Sbjct: 1   MEKEGLGLEITELRLG-LPGRDVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDAE 60

Query: 61  -------GRKQVVGWPPVCSYRRRNSLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDL 120
                   + QVVGWPPVCSYR++NS +E   ++  +G     YVKV ++G  ++RK+DL
Sbjct: 61  KVNDSPAAKSQVVGWPPVCSYRKKNSCKEASTTKVGLG-----YVKVSMDGVPYLRKMDL 120

Query: 121 GMVKGYGELVDAVEKLFG-TPIG--------CSHCTITYEDRDGDWMLVGDVPWKMFIES 159
           G  +GY +L  A++KLFG   IG        C + TI YED+DGDWML GDVPW MF+ES
Sbjct: 121 GSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTI-YEDKDGDWMLAGDVPWGMFLES 180

[Close]
BLAST of CmoCh01G001260 vs. TAIR 10
Match: AT1G52830.1 (indole-3-acetic acid 6 )

HSP 1 Score: 136.0 bits (341), Expect = 2.7e-32
Identity = 86/190 (45.26%), Postives = 108/190 (56.84%), Query Frame = 0 

Query: 1   MATEGLGLEITELRLGPIPASKNNE---------KKRVFSEV----------------EV 60
           MA EGL LEITELRLG +P    +E         KKRV S++                 V
Sbjct: 1   MAKEGLALEITELRLG-LPGDNYSEISVCGSSKKKKRVLSDMMTSSALDTENENSVVSSV 60

Query: 61  EDKSDGGGRKQVVGWPPVCSYRRRNSLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDL 120
           ED+S    + Q VGWPPVCSYRR+   +  EE+   +G     YVKV ++G  ++RK+DL
Sbjct: 61  EDESLPVVKSQAVGWPPVCSYRRK---KNNEEASKAIG-----YVKVSMDGVPYMRKIDL 120

Query: 121 GMVKGYGELVDAVEKLFG-TPIGCS------HCTITYEDRDGDWMLVGDVPWKMFIESCK 159
           G    Y  LV  +E LFG   IG +         I YED+D DWMLVGDVPW+MF ESCK
Sbjct: 121 GSSNSYINLVTVLENLFGCLGIGVAKEGKKCEYIIIYEDKDRDWMLVGDVPWQMFKESCK 180

[Close]
BLAST of CmoCh01G001260 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 128.3 bits (321), Expect = 5.6e-30
Identity = 80/184 (43.48%), Postives = 105/184 (57.07%), Query Frame = 0 

Query: 4   EGLGLEITELRLGPIPASK------------NNEKKRVFS---EVEVEDKS-----DGGG 63
           E + L+ TELRLG +P +             NN  KRV S   E E+E  S         
Sbjct: 3   EFVNLKETELRLG-LPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPR 62

Query: 64  RKQVVGWPPVCSYRRRNSLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGE 123
           + Q+VGWPPV SYR+ N   +K ESE    G   +YVKV ++G  ++RK+DL   KGY E
Sbjct: 63  KAQIVGWPPVRSYRKNNIQSKKNESEHEGQG---IYVKVSMDGAPYLRKIDLSCYKGYSE 122

Query: 124 LVDAVEKLFGTPIG---------CSHCTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIK 159
           L+ A+E +F   +G          S    TYED+DGDWML+GDVPW+MFI +CKRLRI+K
Sbjct: 123 LLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMK 182

[Close]
BLAST of CmoCh01G001260 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-29
Identity = 74/173 (42.77%), Postives = 103/173 (59.54%), Query Frame = 0 

Query: 4   EGLGLEITELRLG------PIPASKNNEK---KRVFSEVEVEDKSDGGG--RKQVVGWPP 63
           E + L+ TELRLG       +   K+N++   +    E+E   K++     + Q+VGWPP
Sbjct: 9   ELVNLKATELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPKAQIVGWPP 68

Query: 64  VCSYRRRNSLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLF 123
           V SYR+ N   +K ESEG     +  YVKV ++G  ++RK+DL M K Y EL+ ++E +F
Sbjct: 69  VRSYRKNNVQTKKSESEG-----QGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMF 128

Query: 124 GTPIG---------CSHCTITYEDRDGDWMLVGDVPWKMFIESCKRLRIIKKS 157
              +G          S    TYED+DGDWMLVGDVPW+MF+ SCKRLRI+K S
Sbjct: 129 KFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGS 176

The following BLAST results are available for this feature:
BLAST of CmoCh01G001260 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P130883.7e-4252.97Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1[more]
P322933.4e-4053.23Auxin-induced protein 22A OS=Vigna radiata var. radiata OX=3916 GN=AUX22A PE=2 S... [more]
P496802.2e-3953.41Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1[more]
O245413.5e-3750.28Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 S... [more]
P330782.3e-3650.30Auxin-responsive protein IAA5 OS=Arabidopsis thaliana OX=3702 GN=IAA5 PE=1 SV=3[more]
BLAST of CmoCh01G001260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GBF31.2e-85100.00Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111452634 PE=3 SV=1[more]
A0A6J1KF832.6e-8397.47Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492708 PE=3 SV=1[more]
A0A6J1GBF64.0e-7699.30Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111452634 PE=3 SV=1[more]
A0A6J1KCT28.4e-7496.48Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492708 PE=3 SV=1[more]
A0A5D3DA371.9e-5771.51Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
BLAST of CmoCh01G001260 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022949217.12.6e-85100.00auxin-induced protein AUX22-like isoform X1 [Cucurbita moschata][more]
KAG7036487.17.5e-8598.73Auxin-induced protein 22A, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6606774.17.5e-8598.73Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022997883.15.4e-8397.47auxin-induced protein AUX22-like isoform X1 [Cucurbita maxima][more]
XP_023525675.17.0e-8396.84auxin-induced protein AUX22-like [Cucurbita pepo subsp. pepo][more]
BLAST of CmoCh01G001260 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G15580.11.6e-3750.30indole-3-acetic acid inducible 5 [more]
AT3G15540.11.5e-3545.83indole-3-acetic acid inducible 19 [more]
AT1G52830.12.7e-3245.26indole-3-acetic acid 6 [more]
AT1G04240.15.6e-3043.48AUX/IAA transcriptional regulator family protein [more]
AT5G43700.11.3e-2942.77AUX/IAA transcriptional regulator family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 72..158
e-value: 1.7E-30
score: 107.0
NoneNo IPR availablePANTHERPTHR31734:SF87AUXIN-RESPONSIVE PROTEIN IAA6coord: 4..156
NoneNo IPR availableSUPERFAMILY54277CAD & PB1 domainscoord: 76..152
IPR033389AUX/IAA domainPFAMPF02309AUX_IAAcoord: 120..157
e-value: 1.3E-20
score: 74.3
coord: 29..115
e-value: 1.0E-18
score: 68.1
IPR003311AUX/IAA proteinPANTHERPTHR31734AUXIN-RESPONSIVE PROTEIN IAA17coord: 4..156
IPR000270PB1 domainPROSITEPS51745PB1coord: 77..157
score: 22.572489

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G001260.1CmoCh01G001260.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding