CmoCh01G001180 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G001180
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr01: 512552 .. 514728 (+)
RNA-Seq Expression	CmoCh01G001180
Synteny	CmoCh01G001180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATGGCGACCAAGACCGATGTCAGAGCGGAGCGAAGGAGAAGAATTTCAAGCCGAGAAGGGGATCGAATGGCTCTCATCACCGGCCGCTTGCGAAATCTGCCTCCCTCGCCACCGCCTTCTCCCTCTTCGCCGCCATTTTTTCATCATTATACACATCAACGCGGCCATTCGCACACTGGAATCAACCCGTCCTTCTTCGCAAAGGACACCCACAAGAATCCTGATTCCGGTCCTCTCCCTCAAAACCACGGTATTCTTCTTTTTCTCTTCTCTTCATTCATGTCCTGTTTTTCTTCATCTCAATCGCATCCAGACGTTTCACATTTTGAGATTCCACTGTTTGATTTTTCTTTCTCCGTTCCTTCTTCTTTTAGATGTCCTGATTTATATCTTCCTCGAAATTTTGATCTAGAACCCAAATTTATTAACTAATTCGTACTTTTTCTTTGGCGATGAAGCATCGCTTAGTTTTGCATGGAACATCCATAGACGTATTGGAGATCAATCGTTTTTGTCTACGTTGCAGGAAATGTTAGGATTTTGATATGCACACACTCGAACTTTCTTGTTATAGCCGTTAGATAAATAATCGATTTAGCACATGCATTCCGCATGTTGATTCAAGTTTTATGTGTAACTATTGAGGCATTGAGTGATTTCATCTGATAAGCCTCATATTTGCAAATCATGATGATTGCTCAAATATCAGGTTGAAATTTACATTTCCTCTTTCAATTATTCATCACATGAAAAAGATAATCATCCTGATACCCCAACAATGTGATAGATTCAACTCAACTAGATAACATTGCTATAATATAACCATGAAAAAGATAATCATCCTGTACAAATTTCTTTATCTATAATGAATATATCGCTTTTATATTTCATGTTGAATGAACTAACTTCGAATGAAATAGCCATAACGGAAAGTATTCTATCTCAATGCAGTTAGAAAGACATTAAAAGTGCACTTATATTGATCAGATTTTGGTTTGTCAATGATCGTATATTTGGGCATTTATGAAGTTGGGAAGAAGAATAAGAGAAATCTTTTGATAGTTATGAAATTTTATTGGCAAGTATTAAACATGATACGTTAGTTTCTTTTCTATTCAATGCATAATGATAAAGCAAAAAAGAAATCGATACCAATATCATAGATCTATTTTGGTTGTTTGTTGTTCCTGTTTGAAACTTCGCTAGCAATTGTCATTTGATTTTTCTTGCTGTTGTAATGGGAATTTGAAATCATGATTTTATGTGGGTTAATTTTTTGGATGAGAAAATCTCATTCGACAACAAGTGGTATCAAAACTACAACCATAATTATGGCTTGATGCATGAGAGATGATTGGATTAGCTCACATTGATTTGAATGTTAGTATATAAATGAGAATTAGAATTTCTATCACTTGAACTAACTTATTTGAAGTGAAGAGTCTTGTTTGATCGAAACAGACAATTATATGGAAACCAAAATCACTCTGAATTGTACTTTTAAGTCCGTTTGTTTTGCAGATGTTTCCAAGCCTAAGGATGAAAAGGCTCCCCCTCTACTGAAGCATATTTCAATCAATGAAGTTCATAATAATGCTGCCATAGAATACCAATTCAATCCTAAAAAACTAGACCCCATAGGAGAAGGAAGCACTGAACTAATCTTAAGTCCGTCTTCCGTAACAATGGTTCAGAAGGCCTGCATTGATAACGAACCACTGCCAAAAACAAAGCCCTCAAAACCTAGACTCATCACTTCAAAACGACTAAATGCCAGCATTTTAGCTTCTCAAACCACACGAGTTTTCTGTTCGCTGATCATTGCATCGTTGGCCATTCTATCGCAAGTCGATATCCCACTTACTATAATTAGAAACATAGTGAGGTCAGAGACTGTGATGGCCTCAAAACCTCTCTACATTCTACTGCTCACCAACGCAACGATTGTGGTGGCGAGAATGTTGGCTGAAAAACAGAAAGACAGGGGGGAGGCAGAGGAAGAATGTGAGAAAATGAAGGAAGATGCACAGAACTGGGACTCAGCTGTGAAAGTTTTGGAGAGAGGTTTGGTGTTTTACCAAGCTTTTCGTGCATTTTTCATTGATTTTAGTGTTTATGCAGTGGTTGTTATCTGTGGCCTCTCTGTGCTGTATGTGTTCGGTTTGATCTAG

mRNA sequence

ATGGAAATGGCGACCAAGACCGATGTCAGAGCGGAGCGAAGGAGAAGAATTTCAAGCCGAGAAGGGGATCGAATGGCTCTCATCACCGGCCGCTTGCGAAATCTGCCTCCCTCGCCACCGCCTTCTCCCTCTTCGCCGCCATTTTTTCATCATTATACACATCAACGCGGCCATTCGCACACTGGAATCAACCCGTCCTTCTTCGCAAAGGACACCCACAAGAATCCTGATTCCGGTCCTCTCCCTCAAAACCACGATGTTTCCAAGCCTAAGGATGAAAAGGCTCCCCCTCTACTGAAGCATATTTCAATCAATGAAGTTCATAATAATGCTGCCATAGAATACCAATTCAATCCTAAAAAACTAGACCCCATAGGAGAAGGAAGCACTGAACTAATCTTAAGTCCGTCTTCCGTAACAATGGTTCAGAAGGCCTGCATTGATAACGAACCACTGCCAAAAACAAAGCCCTCAAAACCTAGACTCATCACTTCAAAACGACTAAATGCCAGCATTTTAGCTTCTCAAACCACACGAGTTTTCTGTTCGCTGATCATTGCATCGTTGGCCATTCTATCGCAAGTCGATATCCCACTTACTATAATTAGAAACATAGTGAGGTCAGAGACTGTGATGGCCTCAAAACCTCTCTACATTCTACTGCTCACCAACGCAACGATTGTGGTGGCGAGAATGTTGGCTGAAAAACAGAAAGACAGGGGGGAGGCAGAGGAAGAATGTGAGAAAATGAAGGAAGATGCACAGAACTGGGACTCAGCTGTGAAAGTTTTGGAGAGAGGTTTGGTGTTTTACCAAGCTTTTCGTGCATTTTTCATTGATTTTAGTGTTTATGCAGTGGTTGTTATCTGTGGCCTCTCTGTGCTGTATGTGTTCGGTTTGATCTAG

Coding sequence (CDS)

ATGGAAATGGCGACCAAGACCGATGTCAGAGCGGAGCGAAGGAGAAGAATTTCAAGCCGAGAAGGGGATCGAATGGCTCTCATCACCGGCCGCTTGCGAAATCTGCCTCCCTCGCCACCGCCTTCTCCCTCTTCGCCGCCATTTTTTCATCATTATACACATCAACGCGGCCATTCGCACACTGGAATCAACCCGTCCTTCTTCGCAAAGGACACCCACAAGAATCCTGATTCCGGTCCTCTCCCTCAAAACCACGATGTTTCCAAGCCTAAGGATGAAAAGGCTCCCCCTCTACTGAAGCATATTTCAATCAATGAAGTTCATAATAATGCTGCCATAGAATACCAATTCAATCCTAAAAAACTAGACCCCATAGGAGAAGGAAGCACTGAACTAATCTTAAGTCCGTCTTCCGTAACAATGGTTCAGAAGGCCTGCATTGATAACGAACCACTGCCAAAAACAAAGCCCTCAAAACCTAGACTCATCACTTCAAAACGACTAAATGCCAGCATTTTAGCTTCTCAAACCACACGAGTTTTCTGTTCGCTGATCATTGCATCGTTGGCCATTCTATCGCAAGTCGATATCCCACTTACTATAATTAGAAACATAGTGAGGTCAGAGACTGTGATGGCCTCAAAACCTCTCTACATTCTACTGCTCACCAACGCAACGATTGTGGTGGCGAGAATGTTGGCTGAAAAACAGAAAGACAGGGGGGAGGCAGAGGAAGAATGTGAGAAAATGAAGGAAGATGCACAGAACTGGGACTCAGCTGTGAAAGTTTTGGAGAGAGGTTTGGTGTTTTACCAAGCTTTTCGTGCATTTTTCATTGATTTTAGTGTTTATGCAGTGGTTGTTATCTGTGGCCTCTCTGTGCTGTATGTGTTCGGTTTGATCTAG

Protein sequence

MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSHTGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPKKLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRVFCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDRGEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSVLYVFGLI

Homology

[Close]

BLAST of CmoCh01G001180 vs. ExPASy TrEMBL
Match: A0A6J1GB34 (uncharacterized protein LOC111452396 OS=Cucurbita moschata OX=3662 GN=LOC111452396 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 2.5e-159
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH 60
           MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH
Sbjct: 1   MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH 60

Query: 61  TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK 120
           TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK
Sbjct: 61  TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK 120

Query: 121 KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV 180
           KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV
Sbjct: 121 KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV 180

Query: 181 FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR 240
           FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR
Sbjct: 181 FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR 240

Query: 241 GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSVLYVFGL 300
           GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSVLYVFGL
Sbjct: 241 GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSVLYVFGL 300

Query: 301 I 302
           I
Sbjct: 301 I 301

[Close]

BLAST of CmoCh01G001180 vs. ExPASy TrEMBL
Match: A0A6J1KF67 (uncharacterized protein LOC111493320 OS=Cucurbita maxima OX=3661 GN=LOC111493320 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 6.3e-155
Identity = 293/295 (99.32%), Postives = 293/295 (99.32%), Query Frame = 0


Query: 1   MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH 60
           MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH
Sbjct: 1   MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH 60

Query: 61  TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK 120
           TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK
Sbjct: 61  TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK 120

Query: 121 KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV 180
           KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV
Sbjct: 121 KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV 180

Query: 181 FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR 240
           FCSLIIASLAILSQVDIPLTIIRN VRSETVMASKPLYILLLTNATIVVARMLAEKQKDR
Sbjct: 181 FCSLIIASLAILSQVDIPLTIIRNTVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR 240

Query: 241 GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSVL 296
           GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRA FIDFSVYAVVVICGLSVL
Sbjct: 241 GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAVFIDFSVYAVVVICGLSVL 295

[Close]

BLAST of CmoCh01G001180 vs. ExPASy TrEMBL
Match: A0A0A0L815 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G481250 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 3.0e-104
Identity = 221/299 (73.91%), Postives = 245/299 (81.94%), Query Frame = 0


Query: 1   MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSP-PFFHHYTHQRGHS 60
           MEMATK + R +RRRRI SRE DRMALITGRLRNLPPSPPPSPSSP PF +H THQRGHS
Sbjct: 1   MEMATKIENRTDRRRRIMSREIDRMALITGRLRNLPPSPPPSPSSPSPFLYHQTHQRGHS 60

Query: 61  HTGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNN--AAIEYQF 120
           HTGI+PSFF+KD H NPDS PLP    V KPKD KA PLLK +S++E      AAI +Q 
Sbjct: 61  HTGISPSFFSKDIHANPDSPPLPNAQGVPKPKDAKATPLLKRLSMSEAREEKIAAIGFQI 120

Query: 121 NPKKLDPIGEGSTELILSPSSVTMVQK-ACIDNEPLPKTKPSKPRLITSKRLNASILASQ 180
           N KKLDPIGE  TE + +PS+ +MVQK    DNE L K  PSKP+L TSKRLNASILASQ
Sbjct: 121 NHKKLDPIGEIHTETVSTPSASSMVQKVTSTDNEILLKAHPSKPKLFTSKRLNASILASQ 180

Query: 181 TTRVFCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEK 240
           TTRVFCSLIIASLA+LS V+ PL++I  +VRSE V+ASKPLYILLLT+ATIVVARMLA +
Sbjct: 181 TTRVFCSLIIASLAVLSHVNHPLSMIWKMVRSERVVASKPLYILLLTDATIVVARMLAAR 240

Query: 241 QKDRGEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSVL 296
           QKD  EAEEE EKMKED  NWDSAVKVLERGLVFYQAFRA FIDFSVYAVVVICG+S+L
Sbjct: 241 QKDSREAEEESEKMKEDGHNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICGISLL 299

[Close]

BLAST of CmoCh01G001180 vs. ExPASy TrEMBL
Match: A0A6J1J0I6 (uncharacterized protein LOC111480128 OS=Cucurbita maxima OX=3661 GN=LOC111480128 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.5e-103
Identity = 221/298 (74.16%), Postives = 242/298 (81.21%), Query Frame = 0


Query: 1   MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSP-PFFHHYTHQRGHS 60
           MEMATKTD RAERR++I S+E DRMALITGRLR LPPSPPPSPSSP PF  +  HQRGHS
Sbjct: 1   MEMATKTDSRAERRQKIRSKETDRMALITGRLRTLPPSPPPSPSSPSPFLQYQIHQRGHS 60

Query: 61  HTGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNN--AAIEYQF 120
           HTGI+PSF +K+  KNPDS PL   H + K KD  A PL KH+ INEV      A  +Q 
Sbjct: 61  HTGISPSFLSKELQKNPDSLPLRPVHAIPKLKDGTAVPLPKHMPINEVQEEKITATGFQI 120

Query: 121 NPKKLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQT 180
           N KK+DPIGE   E+I SPS++ MVQKA I NEPL K +PSKPR+ TSKRLN SILASQT
Sbjct: 121 NDKKIDPIGEVCKEMI-SPSALPMVQKATIVNEPLSKPQPSKPRIFTSKRLNVSILASQT 180

Query: 181 TRVFCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQ 240
            RVFCSLIIASLAILS VD PL  IRNIV SE+VMASKPLYILLLTN TIVVARMLA++Q
Sbjct: 181 KRVFCSLIIASLAILSHVDHPLFTIRNIVSSESVMASKPLYILLLTNVTIVVARMLADRQ 240

Query: 241 KDRGEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSVL 296
           K  GEAEEECEKMKED QNW+SAVKVLERGLVFYQAFRA FIDFSVYAVVVICGLS+L
Sbjct: 241 KHGGEAEEECEKMKEDGQNWESAVKVLERGLVFYQAFRAIFIDFSVYAVVVICGLSLL 297

[Close]

BLAST of CmoCh01G001180 vs. ExPASy TrEMBL
Match: A0A1S3BH05 (uncharacterized protein LOC103489936 OS=Cucumis melo OX=3656 GN=LOC103489936 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.9e-103
Identity = 220/301 (73.09%), Postives = 248/301 (82.39%), Query Frame = 0


Query: 1   MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSP-PFFHHYTHQRGHS 60
           MEM TKTD R ERRRRI SRE DRMALITGRL NLPPSPPPSPSSP PF  H THQRGHS
Sbjct: 1   MEMPTKTDNRTERRRRIISREMDRMALITGRLPNLPPSPPPSPSSPSPFLFHQTHQRGHS 60

Query: 61  HTGINPSFFAKD--THKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNN--AAIEY 120
           HTGI+PSFF+KD   H NPDS P P    + KPKD KA PLLK +S++E      AAI +
Sbjct: 61  HTGISPSFFSKDLHNHNNPDSLPFPNAQGIPKPKDAKATPLLKRLSMSEAREEKIAAIGF 120

Query: 121 QFNPKKLDPIGEGSTELILSPSSVTMVQK-ACIDNEPLPKTKPSKPRLITSKRLNASILA 180
           QFN KKLDPIGE  TE + +PS+ +MVQK   ID++ L KT PSKP+L TSKR+NASILA
Sbjct: 121 QFNHKKLDPIGEVHTETVSTPSASSMVQKITSIDDKILLKTHPSKPKLFTSKRINASILA 180

Query: 181 SQTTRVFCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLA 240
           SQTTRVFCSLIIASL++LS V+ PL+II N+VRSE+V+ASKPLYILLLT+ATIV+ARMLA
Sbjct: 181 SQTTRVFCSLIIASLSVLSHVNHPLSIIWNMVRSESVVASKPLYILLLTDATIVLARMLA 240

Query: 241 EKQKDRGEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSV 296
           E+QKD G AEEE EKMKED +NWDSAVKVLERGLVFYQAFRA FIDFSVYAVVVICG+ +
Sbjct: 241 ERQKDGGVAEEEIEKMKEDGRNWDSAVKVLERGLVFYQAFRAIFIDFSVYAVVVICGICL 300

[Close]

BLAST of CmoCh01G001180 vs. NCBI nr
Match: XP_022948865.1 (uncharacterized protein LOC111452396 [Cucurbita moschata])

HSP 1 Score: 571.2 bits (1471), Expect = 5.1e-159
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH 60
           MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH
Sbjct: 1   MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH 60

Query: 61  TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK 120
           TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK
Sbjct: 61  TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK 120

Query: 121 KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV 180
           KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV
Sbjct: 121 KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV 180

Query: 181 FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR 240
           FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR
Sbjct: 181 FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR 240

Query: 241 GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSVLYVFGL 300
           GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSVLYVFGL
Sbjct: 241 GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSVLYVFGL 300

Query: 301 I 302
           I
Sbjct: 301 I 301

[Close]

BLAST of CmoCh01G001180 vs. NCBI nr
Match: KAG7036481.1 (hypothetical protein SDJN02_00098, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 569.3 bits (1466), Expect = 2.0e-158
Identity = 300/301 (99.67%), Postives = 300/301 (99.67%), Query Frame = 0


Query: 1   MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH 60
           MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH
Sbjct: 1   MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH 60

Query: 61  TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK 120
           TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK
Sbjct: 61  TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK 120

Query: 121 KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV 180
           KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV
Sbjct: 121 KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV 180

Query: 181 FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR 240
           FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR
Sbjct: 181 FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR 240

Query: 241 GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSVLYVFGL 300
           GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVV CGLSVLYVFGL
Sbjct: 241 GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVTCGLSVLYVFGL 300

Query: 301 I 302
           I
Sbjct: 301 I 301

[Close]

BLAST of CmoCh01G001180 vs. NCBI nr
Match: XP_023523624.1 (uncharacterized protein LOC111787802 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 563.1 bits (1450), Expect = 1.4e-156
Identity = 297/301 (98.67%), Postives = 298/301 (99.00%), Query Frame = 0


Query: 1   MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH 60
           MEMATKTDVRA+RRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHY HQRGHSH
Sbjct: 1   MEMATKTDVRADRRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYAHQRGHSH 60

Query: 61  TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK 120
           TGINPSFFAKDTHKNPDSGPL QNHDVSKPKDEKAPPLLKHISINEVHNNAAIEY FNPK
Sbjct: 61  TGINPSFFAKDTHKNPDSGPLSQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYHFNPK 120

Query: 121 KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV 180
           KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV
Sbjct: 121 KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV 180

Query: 181 FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR 240
           FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR
Sbjct: 181 FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR 240

Query: 241 GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSVLYVFGL 300
           GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSVLYVFGL
Sbjct: 241 GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSVLYVFGL 300

Query: 301 I 302
           I
Sbjct: 301 I 301

[Close]

BLAST of CmoCh01G001180 vs. NCBI nr
Match: XP_022998749.1 (uncharacterized protein LOC111493320 [Cucurbita maxima])

HSP 1 Score: 556.6 bits (1433), Expect = 1.3e-154
Identity = 293/295 (99.32%), Postives = 293/295 (99.32%), Query Frame = 0


Query: 1   MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH 60
           MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH
Sbjct: 1   MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH 60

Query: 61  TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK 120
           TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK
Sbjct: 61  TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK 120

Query: 121 KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV 180
           KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV
Sbjct: 121 KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV 180

Query: 181 FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR 240
           FCSLIIASLAILSQVDIPLTIIRN VRSETVMASKPLYILLLTNATIVVARMLAEKQKDR
Sbjct: 181 FCSLIIASLAILSQVDIPLTIIRNTVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR 240

Query: 241 GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSVL 296
           GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRA FIDFSVYAVVVICGLSVL
Sbjct: 241 GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAVFIDFSVYAVVVICGLSVL 295

[Close]

BLAST of CmoCh01G001180 vs. NCBI nr
Match: KAG6606768.1 (hypothetical protein SDJN03_00110, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 548.9 bits (1413), Expect = 2.7e-152
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0


Query: 1   MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH 60
           MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH
Sbjct: 1   MEMATKTDVRAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSH 60

Query: 61  TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK 120
           TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK
Sbjct: 61  TGINPSFFAKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPK 120

Query: 121 KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV 180
           KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV
Sbjct: 121 KLDPIGEGSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRV 180

Query: 181 FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR 240
           FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR
Sbjct: 181 FCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDR 240

Query: 241 GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVV 289
           GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVV
Sbjct: 241 GEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVV 288

[Close]

BLAST of CmoCh01G001180 vs. TAIR 10
Match: AT1G52343.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 89.0 bits (219), Expect = 7.2e-18
Identity = 94/285 (32.98%), Postives = 134/285 (47.02%), Query Frame = 0


Query: 10  RAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSHTGINPSFF- 69
           R ERRRRI  R  DR+ALITG+L NL PS P S SS    H+ T+         + SF  
Sbjct: 5   REERRRRIMERGSDRLALITGQLHNLDPSSPSSSSSSSASHNRTY---------SESFMP 64

Query: 70  -AKDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPKKLDPIGE 129
             K  H      P  +     + K     P L  +    +H          P K++P  +
Sbjct: 65  QTKSDHHQILESPSLKYQFKEEVKARSEEPKLSTV----LH---------KPLKIEPTKQ 124

Query: 130 GSTELILSPSSVTMVQKACIDNEPLPKTKPSKPRLITSKRLNASILASQTTRVFCSLIIA 189
                       T  QK+  +  P+           +SK+LNASI++S+ TR   SL IA
Sbjct: 125 ---------EEATRSQKS-QNQRPI--------CFFSSKKLNASIISSERTRSLSSLTIA 184

Query: 190 SLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKDRGEAEEEC 249
           +  +L    +P     NI  S T++A +PL++L+LT+  IV++ +  E        E E 
Sbjct: 185 AFVVL----LPRL---NITSSNTILALRPLWLLILTDCAIVMSHLTTEASGGGLSHEMEE 242

Query: 250 EKMKED---AQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVI 290
           +    D    +NW  A ++LERG+V YQA R  FID S+Y VVV+
Sbjct: 245 DGKGRDGNNGENWSDAERLLERGVVVYQALRGMFIDCSLYMVVVV 242

[Close]

BLAST of CmoCh01G001180 vs. TAIR 10
Match: AT4G32680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52343.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 3.0e-08
Identity = 83/295 (28.14%), Postives = 134/295 (45.42%), Query Frame = 0


Query: 10  RAERRRRISSREGDRMALITGRLRNLPPSPPPSPSSPPFFHHYTHQRGHSHTGINPSFFA 69
           R  RRR+I  R  DR+A ITG++  + PSPPPS S+             S + +      
Sbjct: 6   REARRRKILDRGSDRLAFITGQINGV-PSPPPSDSTSSL----------SQSDLQTDQSL 65

Query: 70  KDTHKNPDSGPLPQNHDVSKPKDEKAPPLLKHISINEVHNNAAIEYQFNPKK-LDPIGEG 129
            DT    D     Q    +  +D  +   +     + +H +   E    P++  + + E 
Sbjct: 66  PDTIPPRDQILKAQEIAFTSHQDNISDAAMLENVDHIIHQSR--EEPLQPQRHAETLAEA 125

Query: 130 S------TELILSPSSVTMVQK-ACIDNEPLPKTKP--SKPRLITSKRLNASILASQTTR 189
           S      T  I  P + + VQ  + +D        P  S    IT K + A+I AS+  R
Sbjct: 126 SASDPRDTTTIQPPPTTSSVQNPSVVDLGASQAFIPVVSFVNAITPKHIGAAIDASEYAR 185

Query: 190 VFCSLIIASLAILSQVDIPLTIIRNIVRSETVMASKPLYILLLTNATIVVARMLAEKQKD 249
           +F +L IA + ILS   +  + + NIV      + +P+++L+LT+ATIV+ R+L      
Sbjct: 186 MFTALAIALVVILSH--LGFSSLGNIV------SFRPVFLLVLTDATIVLGRVLL---SH 245

Query: 250 RGEAEEECEKMKEDAQNWDSAVKVLERGLVFYQAFRAFFIDFSVYAVVVICGLSV 295
           RG++      +       D     LE  ++  +   A  +DFS+YAV++ICGL V
Sbjct: 246 RGDSSSASGTVMSGQGIVDQVGNALETVMMVKKIMDALLMDFSLYAVILICGLLV 276

The following BLAST results are available for this feature:

BLAST of CmoCh01G001180 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G001180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GB34	2.5e-159	100.00	uncharacterized protein LOC111452396 OS=Cucurbita moschata OX=3662 GN=LOC1114523...	[more]
A0A6J1KF67	6.3e-155	99.32	uncharacterized protein LOC111493320 OS=Cucurbita maxima OX=3661 GN=LOC111493320...	[more]
A0A0A0L815	3.0e-104	73.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G481250 PE=4 SV=1	[more]
A0A6J1J0I6	1.5e-103	74.16	uncharacterized protein LOC111480128 OS=Cucurbita maxima OX=3661 GN=LOC111480128...	[more]
A0A1S3BH05	1.9e-103	73.09	uncharacterized protein LOC103489936 OS=Cucumis melo OX=3656 GN=LOC103489936 PE=...	[more]

BLAST of CmoCh01G001180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948865.1	5.1e-159	100.00	uncharacterized protein LOC111452396 [Cucurbita moschata]	[more]
KAG7036481.1	2.0e-158	99.67	hypothetical protein SDJN02_00098, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023523624.1	1.4e-156	98.67	uncharacterized protein LOC111787802 [Cucurbita pepo subsp. pepo]	[more]
XP_022998749.1	1.3e-154	99.32	uncharacterized protein LOC111493320 [Cucurbita maxima]	[more]
KAG6606768.1	2.7e-152	100.00	hypothetical protein SDJN03_00110, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmoCh01G001180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52343.1	7.2e-18	32.98	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G32680.1	3.0e-08	28.14	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 233..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..94
None	No IPR available	PANTHER	PTHR35469:SF5	TRANSMEMBRANE PROTEIN	coord: 3..295
None	No IPR available	PANTHER	PTHR35469	TRANSMEMBRANE PROTEIN	coord: 3..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G001180.1	CmoCh01G001180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane