CmoCh01G001050 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G001050
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionAvr9/Cf-9 rapidly elicited protein
LocationCmo_Chr01: 467629 .. 468177 (+)
RNA-Seq ExpressionCmoCh01G001050
SyntenyCmoCh01G001050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCGTATAGCTTATTACATGCTGAGGAAAGGAATTTGTAAGAGCAAGCTTATGGCCGACCTCACAAATCTCATGTCCAAACGCCGCAAAATCACCGGCAAAGCCATCGCGAATCTCATGTTCCACCACCAAGATGGTGCCGCCTCTGCCTTCTCCCTCGCCCCTTTTCGCCGTAACCACCACCCCGATGGCACCGCCAGTCACTACGAATTTAGCTGCCGCAACAGCCCTGCTTTTCCCAGCTTCCATTACTTTAACAAACGCCGTCGTTTCTTCACGTGTACTCAGACACCCAACACGCTGGACGATGACGTGGCCGCGATGAATGCTTTCAAGACTGTTTTGGAAGTTCTGAACAATGACATGGCGTCCCCTGCGCTACCCGAGTTTGGGCGAAGCCCGATGGTGGTGAGGCAGCTGAGAGTTACTGACTCGCCGTGTCCGGTTGCGGGAGCTGCCGTGGAGGACAGCCACGTGGATAAAGCGGCGGAGGAATTTATAAACCGGTTTTATAAGAAGCTTCGGTTACAGAAGATGGGGGAGTAA

mRNA sequence

ATGGTCCGTATAGCTTATTACATGCTGAGGAAAGGAATTTGTAAGAGCAAGCTTATGGCCGACCTCACAAATCTCATGTCCAAACGCCGCAAAATCACCGGCAAAGCCATCGCGAATCTCATGTTCCACCACCAAGATGGTGCCGCCTCTGCCTTCTCCCTCGCCCCTTTTCGCCGTAACCACCACCCCGATGGCACCGCCAGTCACTACGAATTTAGCTGCCGCAACAGCCCTGCTTTTCCCAGCTTCCATTACTTTAACAAACGCCGTCGTTTCTTCACGTGTACTCAGACACCCAACACGCTGGACGATGACGTGGCCGCGATGAATGCTTTCAAGACTGTTTTGGAAGTTCTGAACAATGACATGGCGTCCCCTGCGCTACCCGAGTTTGGGCGAAGCCCGATGGTGGTGAGGCAGCTGAGAGTTACTGACTCGCCGTGTCCGGTTGCGGGAGCTGCCGTGGAGGACAGCCACGTGGATAAAGCGGCGGAGGAATTTATAAACCGGTTTTATAAGAAGCTTCGGTTACAGAAGATGGGGGAGTAA

Coding sequence (CDS)

ATGGTCCGTATAGCTTATTACATGCTGAGGAAAGGAATTTGTAAGAGCAAGCTTATGGCCGACCTCACAAATCTCATGTCCAAACGCCGCAAAATCACCGGCAAAGCCATCGCGAATCTCATGTTCCACCACCAAGATGGTGCCGCCTCTGCCTTCTCCCTCGCCCCTTTTCGCCGTAACCACCACCCCGATGGCACCGCCAGTCACTACGAATTTAGCTGCCGCAACAGCCCTGCTTTTCCCAGCTTCCATTACTTTAACAAACGCCGTCGTTTCTTCACGTGTACTCAGACACCCAACACGCTGGACGATGACGTGGCCGCGATGAATGCTTTCAAGACTGTTTTGGAAGTTCTGAACAATGACATGGCGTCCCCTGCGCTACCCGAGTTTGGGCGAAGCCCGATGGTGGTGAGGCAGCTGAGAGTTACTGACTCGCCGTGTCCGGTTGCGGGAGCTGCCGTGGAGGACAGCCACGTGGATAAAGCGGCGGAGGAATTTATAAACCGGTTTTATAAGAAGCTTCGGTTACAGAAGATGGGGGAGTAA

Protein sequence

MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRNHHPDGTASHYEFSCRNSPAFPSFHYFNKRRRFFTCTQTPNTLDDDVAAMNAFKTVLEVLNNDMASPALPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQKMGE
Homology
BLAST of CmoCh01G001050 vs. ExPASy TrEMBL
Match: A0A6J1GBG7 (uncharacterized protein LOC111452647 OS=Cucurbita moschata OX=3662 GN=LOC111452647 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.5e-98
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0

Query: 1   MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRN 60
           MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRN
Sbjct: 15  MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRN 74

Query: 61  HHPDGTASHYEFSCRNSPAFPSFHYFNKRRRFFTCTQTPNTLDDDVAAMNAFKTVLEVLN 120
           HHPDGTASHYEFSCRNSPAFPSFHYFNKRRRFFTCTQTPNTLDDDVAAMNAFKTVLEVLN
Sbjct: 75  HHPDGTASHYEFSCRNSPAFPSFHYFNKRRRFFTCTQTPNTLDDDVAAMNAFKTVLEVLN 134

Query: 121 NDMASPALPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQKM 180
           NDMASPALPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQKM
Sbjct: 135 NDMASPALPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQKM 194

Query: 181 GE 183
           GE
Sbjct: 195 GE 196

BLAST of CmoCh01G001050 vs. ExPASy TrEMBL
Match: A0A6J1KB27 (uncharacterized protein LOC111492696 OS=Cucurbita maxima OX=3661 GN=LOC111492696 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.8e-91
Identity = 172/183 (93.99%), Postives = 174/183 (95.08%), Query Frame = 0

Query: 1   MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMF-HHQDGAASAFSLAPFRR 60
           MVRIAYYMLRKGICKSKLMADLTNLMS+RRKITGKAIANLM  HH DGAASAFSLAPFRR
Sbjct: 15  MVRIAYYMLRKGICKSKLMADLTNLMSRRRKITGKAIANLMLHHHHDGAASAFSLAPFRR 74

Query: 61  NHHPDGTASHYEFSCRNSPAFPSFHYFNKRRRFFTCTQTPNTLDDDVAAMNAFKTVLEVL 120
           NHHPDGTA HYEFSCRNSPAFPSFHYFNKRR FFTCTQTP+TLDDDV AMNAFKTVLEVL
Sbjct: 75  NHHPDGTADHYEFSCRNSPAFPSFHYFNKRRHFFTCTQTPDTLDDDVGAMNAFKTVLEVL 134

Query: 121 NNDMASPALPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQK 180
           NNDM SPALPEFGRSPMVVRQLRVTD PCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQK
Sbjct: 135 NNDMGSPALPEFGRSPMVVRQLRVTDPPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQK 194

Query: 181 MGE 183
            GE
Sbjct: 195 TGE 197

BLAST of CmoCh01G001050 vs. ExPASy TrEMBL
Match: A0A0A0LBN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G462680 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 7.7e-71
Identity = 147/192 (76.56%), Postives = 156/192 (81.25%), Query Frame = 0

Query: 1   MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQDGAAS-AFSLAPFRR 60
           MVRIAYYMLRKGI KSKLM DLTNL+SKRRK+TGKA+ NLMFHH DG +  AFSLAPFRR
Sbjct: 15  MVRIAYYMLRKGIFKSKLMVDLTNLISKRRKLTGKALKNLMFHHHDGVSGLAFSLAPFRR 74

Query: 61  NHHPD--GTASHYEFSCRNSPAFPSFHY-FNKRRRFFTCTQTPNTLDDDVAAMNAFKTVL 120
           NH+ D    ASHYEFSC N+PAFPSFHY FNKRR FF C   PNTLDDDVAAMNAFK V 
Sbjct: 75  NHNLDLAAAASHYEFSCTNTPAFPSFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVW 134

Query: 121 EVLNN------DMASPALPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINR 180
           E LNN      ++ASPALP FGRSPMVVRQLRVTDSP PVAG   ED HVDKAAEEFINR
Sbjct: 135 EALNNNNDVAAEVASPALPGFGRSPMVVRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINR 194

Query: 181 FYKKLRLQKMGE 183
           FYK+LRLQK  E
Sbjct: 195 FYKELRLQKTAE 206

BLAST of CmoCh01G001050 vs. ExPASy TrEMBL
Match: A0A5A7U4P4 (Avr9/Cf-9 rapidly elicited protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00700 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.8e-70
Identity = 146/194 (75.26%), Postives = 154/194 (79.38%), Query Frame = 0

Query: 1   MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQDGAAS-AFSLAPFRR 60
           MVRIAYYMLRKGI KSKLM DLTNL+SKRRK+TGKA+ NLMFHH DG +  AFSLAPFRR
Sbjct: 15  MVRIAYYMLRKGISKSKLMVDLTNLISKRRKLTGKALKNLMFHHHDGVSGLAFSLAPFRR 74

Query: 61  NHHP---DGTASHYEFSCRNSPAFPSFHY-FNKRRRFFTCTQTPNTLDDDVAAMNAFKTV 120
           NHH       A HYEFSC N+PAFPSFHY FNKRR FF C   PNTLDDDVAAMNAFK V
Sbjct: 75  NHHGLDLAAAAGHYEFSCTNTPAFPSFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAV 134

Query: 121 LEVLNN-------DMASPALPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFI 180
            E LNN       ++ASPALP FGRSPM VRQLRVTDSP PVAG A ED HVDKAAEEFI
Sbjct: 135 WEALNNNNNDMAAEVASPALPGFGRSPMFVRQLRVTDSPFPVAGGADEDCHVDKAAEEFI 194

Query: 181 NRFYKKLRLQKMGE 183
           NRFYK+LRLQK  E
Sbjct: 195 NRFYKELRLQKTAE 208

BLAST of CmoCh01G001050 vs. ExPASy TrEMBL
Match: A0A1S4DWM0 (uncharacterized protein LOC103490087 OS=Cucumis melo OX=3656 GN=LOC103490087 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.8e-70
Identity = 146/194 (75.26%), Postives = 154/194 (79.38%), Query Frame = 0

Query: 1   MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQDGAAS-AFSLAPFRR 60
           MVRIAYYMLRKGI KSKLM DLTNL+SKRRK+TGKA+ NLMFHH DG +  AFSLAPFRR
Sbjct: 15  MVRIAYYMLRKGISKSKLMVDLTNLISKRRKLTGKALKNLMFHHHDGVSGLAFSLAPFRR 74

Query: 61  NHHP---DGTASHYEFSCRNSPAFPSFHY-FNKRRRFFTCTQTPNTLDDDVAAMNAFKTV 120
           NHH       A HYEFSC N+PAFPSFHY FNKRR FF C   PNTLDDDVAAMNAFK V
Sbjct: 75  NHHGLDLAAAAGHYEFSCTNTPAFPSFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAV 134

Query: 121 LEVLNN-------DMASPALPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFI 180
            E LNN       ++ASPALP FGRSPM VRQLRVTDSP PVAG A ED HVDKAAEEFI
Sbjct: 135 WEALNNNNNDMAAEVASPALPGFGRSPMFVRQLRVTDSPFPVAGGADEDCHVDKAAEEFI 194

Query: 181 NRFYKKLRLQKMGE 183
           NRFYK+LRLQK  E
Sbjct: 195 NRFYKELRLQKTAE 208

BLAST of CmoCh01G001050 vs. NCBI nr
Match: XP_022949233.1 (uncharacterized protein LOC111452647 [Cucurbita moschata])

HSP 1 Score: 367.9 bits (943), Expect = 5.2e-98
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0

Query: 1   MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRN 60
           MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRN
Sbjct: 15  MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRN 74

Query: 61  HHPDGTASHYEFSCRNSPAFPSFHYFNKRRRFFTCTQTPNTLDDDVAAMNAFKTVLEVLN 120
           HHPDGTASHYEFSCRNSPAFPSFHYFNKRRRFFTCTQTPNTLDDDVAAMNAFKTVLEVLN
Sbjct: 75  HHPDGTASHYEFSCRNSPAFPSFHYFNKRRRFFTCTQTPNTLDDDVAAMNAFKTVLEVLN 134

Query: 121 NDMASPALPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQKM 180
           NDMASPALPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQKM
Sbjct: 135 NDMASPALPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQKM 194

Query: 181 GE 183
           GE
Sbjct: 195 GE 196

BLAST of CmoCh01G001050 vs. NCBI nr
Match: KAG7036469.1 (hypothetical protein SDJN02_00086, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 364.0 bits (933), Expect = 7.5e-97
Identity = 179/182 (98.35%), Postives = 180/182 (98.90%), Query Frame = 0

Query: 1   MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRN 60
           M+RIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRN
Sbjct: 1   MIRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRN 60

Query: 61  HHPDGTASHYEFSCRNSPAFPSFHYFNKRRRFFTCTQTPNTLDDDVAAMNAFKTVLEVLN 120
           HHPDGTA HYEFSCRNSPAFPSFHYFNKRR FFTCTQTPNTLDDDVAAMNAFKTVLEVLN
Sbjct: 61  HHPDGTAGHYEFSCRNSPAFPSFHYFNKRRHFFTCTQTPNTLDDDVAAMNAFKTVLEVLN 120

Query: 121 NDMASPALPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQKM 180
           NDMASPALPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQKM
Sbjct: 121 NDMASPALPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQKM 180

Query: 181 GE 183
           GE
Sbjct: 181 GE 182

BLAST of CmoCh01G001050 vs. NCBI nr
Match: XP_023524876.1 (uncharacterized protein LOC111788674 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.7 bits (927), Expect = 3.7e-96
Identity = 178/182 (97.80%), Postives = 179/182 (98.35%), Query Frame = 0

Query: 1   MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRN 60
           MVRIAYYMLRKGICKSKLM DLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRN
Sbjct: 1   MVRIAYYMLRKGICKSKLMGDLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRN 60

Query: 61  HHPDGTASHYEFSCRNSPAFPSFHYFNKRRRFFTCTQTPNTLDDDVAAMNAFKTVLEVLN 120
           HHPDGTA HYEFSCRNSPAFPSFHYFNKRR FFTCTQTPNTLDDDVAAMNAFKTVLEVLN
Sbjct: 61  HHPDGTAGHYEFSCRNSPAFPSFHYFNKRRHFFTCTQTPNTLDDDVAAMNAFKTVLEVLN 120

Query: 121 NDMASPALPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQKM 180
           NDMASPA+PEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQKM
Sbjct: 121 NDMASPAVPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQKM 180

Query: 181 GE 183
           GE
Sbjct: 181 GE 182

BLAST of CmoCh01G001050 vs. NCBI nr
Match: XP_022997865.1 (uncharacterized protein LOC111492696 [Cucurbita maxima])

HSP 1 Score: 345.1 bits (884), Expect = 3.6e-91
Identity = 172/183 (93.99%), Postives = 174/183 (95.08%), Query Frame = 0

Query: 1   MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMF-HHQDGAASAFSLAPFRR 60
           MVRIAYYMLRKGICKSKLMADLTNLMS+RRKITGKAIANLM  HH DGAASAFSLAPFRR
Sbjct: 15  MVRIAYYMLRKGICKSKLMADLTNLMSRRRKITGKAIANLMLHHHHDGAASAFSLAPFRR 74

Query: 61  NHHPDGTASHYEFSCRNSPAFPSFHYFNKRRRFFTCTQTPNTLDDDVAAMNAFKTVLEVL 120
           NHHPDGTA HYEFSCRNSPAFPSFHYFNKRR FFTCTQTP+TLDDDV AMNAFKTVLEVL
Sbjct: 75  NHHPDGTADHYEFSCRNSPAFPSFHYFNKRRHFFTCTQTPDTLDDDVGAMNAFKTVLEVL 134

Query: 121 NNDMASPALPEFGRSPMVVRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQK 180
           NNDM SPALPEFGRSPMVVRQLRVTD PCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQK
Sbjct: 135 NNDMGSPALPEFGRSPMVVRQLRVTDPPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQK 194

Query: 181 MGE 183
            GE
Sbjct: 195 TGE 197

BLAST of CmoCh01G001050 vs. NCBI nr
Match: KAG6606756.1 (hypothetical protein SDJN03_00098, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 330.5 bits (846), Expect = 9.2e-87
Identity = 162/164 (98.78%), Postives = 162/164 (98.78%), Query Frame = 0

Query: 19  MADLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRNHHPDGTASHYEFSCRNSP 78
           MADLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRNHHPDGTA HYEFSCRNSP
Sbjct: 1   MADLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRNHHPDGTAGHYEFSCRNSP 60

Query: 79  AFPSFHYFNKRRRFFTCTQTPNTLDDDVAAMNAFKTVLEVLNNDMASPALPEFGRSPMVV 138
           AFPSFHYFNKRR FFTCTQTPNTLDDDVAAMNAFKTVLEVLNNDMASPALPEFGRSPMVV
Sbjct: 61  AFPSFHYFNKRRHFFTCTQTPNTLDDDVAAMNAFKTVLEVLNNDMASPALPEFGRSPMVV 120

Query: 139 RQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQKMGE 183
           RQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQKMGE
Sbjct: 121 RQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKKLRLQKMGE 164

BLAST of CmoCh01G001050 vs. TAIR 10
Match: AT1G52140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 111.7 bits (278), Expect = 6.3e-25
Identity = 85/201 (42.29%), Postives = 107/201 (53.23%), Query Frame = 0

Query: 1   MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQDGA-ASAFSLAPFRR 60
           +VR   YM+RKG+ K+KL+AD  N   KR K       NLMFH +    A + + A    
Sbjct: 14  IVRFLLYMIRKGVSKNKLIADF-NATLKRGK-------NLMFHQRRRVHAGSTASAALNA 73

Query: 61  NHHPDGTASHYEFSCRNSP--AFP----SFHYFNKRRRFFTCTQTPNTLDDDVAAMNAFK 120
                 +   YEFSC N+P  +FP    +F         FTC QTP TLDDDVAA  A  
Sbjct: 74  TSATASSRQEYEFSCSNTPNYSFPFSNMAFMRKKSHNNLFTCGQTPQTLDDDVAAARA-- 133

Query: 121 TVLEVLNN----------DMA---SPALPEFGRSPMVVRQLRVTDSPCPVA--GAAVEDS 180
            VLE+LN           D+    SP  P FG++P+ VR LRVTDSP P+      V + 
Sbjct: 134 -VLELLNGVGEKGNVTPADLTVALSPYFPGFGQTPL-VRPLRVTDSPFPLTPENGDVANG 193

BLAST of CmoCh01G001050 vs. TAIR 10
Match: AT3G16330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 5.0e-22
Identity = 85/207 (41.06%), Postives = 103/207 (49.76%), Query Frame = 0

Query: 1   MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQ---DGAASAFSLAPF 60
           +VR   YML KGI K KL+AD  N   KR K       NLMFH++    G+A A      
Sbjct: 14  IVRFVLYMLHKGISKQKLLADF-NATLKRGK-------NLMFHNRRRVPGSAVA------ 73

Query: 61  RRNHHPDGTASHYEFSCRNSP--AFP----SFHYFNKRRRFFTCTQTPNTLDDDVAAMNA 120
               HP    + YEFSC ++P   FP    +F   +     F+C Q P TLDDD +   A
Sbjct: 74  ---SHPQ---NEYEFSCSDTPNYTFPFNMAAFKKKSHHNSLFSCGQAPPTLDDDTSVSRA 133

Query: 121 FKTVLEVLNN------------------DMASPALPEFGRSPMVVRQLRVTDSPCPVAGA 180
              VLE+LN+                     SP LP FGRS   VR LRVTDSP P+   
Sbjct: 134 ---VLELLNSGGDHDQGSNTPAFSIEALTALSPYLPGFGRSTSSVRPLRVTDSPFPLREE 193

BLAST of CmoCh01G001050 vs. TAIR 10
Match: AT4G29110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to chitin; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.8 bits (190), Expect = 1.0e-14
Identity = 69/185 (37.30%), Postives = 89/185 (48.11%), Query Frame = 0

Query: 1   MVRIAYYMLRKGICKSKLMADLTNLMSKRRKITGKAIANLMFHHQDGAASAFSLAPFRRN 60
           +VRI + +L+ G  K+KLM DL NLM KR     KAI NL                    
Sbjct: 28  VVRIVFCVLKTGTVKNKLMLDL-NLMLKR---GNKAITNL-------------------R 87

Query: 61  HHPDGTASHYEFSCRNSPAFPSFHYFNKRRRFFTCTQTPNTLDDDVAAMN-AFKTVLEVL 120
                T SH   S      +  F + +KR+R     +     D++  A+  A K V E+L
Sbjct: 88  RRSSSTGSHDVSSSSRVRDYDPFAFISKRKR-----RVHGGYDNEEDAVEAAVKKVFELL 147

Query: 121 -NNDMASPALPEFGRSPMV----VRQLRVTDSPCPVAGAAVEDSHVDKAAEEFINRFYKK 180
             ND  + A      SP++    VRQLRVTDSP P+      D  VDKAAEEFI +FYK 
Sbjct: 148 GENDKKTVATESARESPLIMSPAVRQLRVTDSPFPLDDGGDHDHVVDKAAEEFIKKFYKN 184

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GBG72.5e-98100.00uncharacterized protein LOC111452647 OS=Cucurbita moschata OX=3662 GN=LOC1114526... [more]
A0A6J1KB271.8e-9193.99uncharacterized protein LOC111492696 OS=Cucurbita maxima OX=3661 GN=LOC111492696... [more]
A0A0A0LBN47.7e-7176.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G462680 PE=4 SV=1[more]
A0A5A7U4P43.8e-7075.26Avr9/Cf-9 rapidly elicited protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S4DWM03.8e-7075.26uncharacterized protein LOC103490087 OS=Cucumis melo OX=3656 GN=LOC103490087 PE=... [more]
Match NameE-valueIdentityDescription
XP_022949233.15.2e-98100.00uncharacterized protein LOC111452647 [Cucurbita moschata][more]
KAG7036469.17.5e-9798.35hypothetical protein SDJN02_00086, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023524876.13.7e-9697.80uncharacterized protein LOC111788674 [Cucurbita pepo subsp. pepo][more]
XP_022997865.13.6e-9193.99uncharacterized protein LOC111492696 [Cucurbita maxima][more]
KAG6606756.19.2e-8798.78hypothetical protein SDJN03_00098, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
AT1G52140.16.3e-2542.29unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G16330.15.0e-2241.06unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G29110.11.0e-1437.30unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 158..180
e-value: 3.2E-9
score: 36.2
NoneNo IPR availablePANTHERPTHR33265:SF26AVR9/CF-9 RAPIDLY ELICITED PROTEINcoord: 1..180
NoneNo IPR availablePANTHERPTHR33265AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATEDcoord: 1..180

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G001050.1CmoCh01G001050.1mRNA