CmoCh01G000930 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G000930
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Oxidative stress 3, putative isoform 2
Location	Cmo_Chr01: 423584 .. 424723 (+)
RNA-Seq Expression	CmoCh01G000930
Synteny	CmoCh01G000930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGGTGTTTGGTGGTTTGGGAATTCTATGCCTTTTCATGTGAGGCCATCAATCCCCCCGTCTTTTATTTATTTATTAATTTAAAATAAAAAATAAGCAAGAACTTGGAATTTTCTCTTGCTGCCTATAAATGTTCCACAAGAAATGTCATAGACTCGAAGGCTGTTTGTGTTGAAAGGGTTATCTTATATATAATATAAATACATCAAAAGCTTATCCCATCAAAGCATCCTTTATCAATTTCTGGATTTTTCTCTGTTTCTCTCTGTTTGTGTTGCTGCTGTTCTTCATCTTCTTCTTGAATATGGGTGGATTGCTTCATCAACCTTGTTCTGTTGCTCTGTGCAAAGGGTTCCATGAAGATGATTGGGGCAAGGGCGGTGAGTATGACTACAACCTTGCCTCTTCCACATCTTCCTTCGAAGATTCAAGCAATTCGTCGGATGATGCGTGTTCATCCACTTCAAATTCTTCATCTCCATCCAATGGAGCGTTGGAGGATTTTACAGAGCTTTTTGCCCAACTCCCAATCAAGTAAGTGTTGTTGTGTTGATGCGATGCTTCCAATTCCCTTTCCTTCCATAAAAGAATTCAAATTTGTAACAGAAACTAGCGTTTGTTTGTGTAGGAGAGGACTGTCCATGTTCTATGAAGGGAAATCCCAGTCGTTTACATCGCTATCAAGTGTAAGAAGCATAGAAGACCTTCCGAAGAAGAGAAGCCCTTACAGCAGTAGATTAAGCGGATGTAAGAGCTATGCAGGAGGGTTGGACACCCACAAATCTGCTTATACTCTTCCCAAGGCTCCCACTTTTAAGAAGGCATCATCATCATCATCCAAAAAGATCTCTGTCTCTTGTCCCGGTTACGAGAGGCAGTGATTTGGTTGGTTGGTTGGTTGGTTGTGATAGCCTTCCATTTCTGTGTGTACATGATGTCTGAGTAGTAGGTTTACAACGTTAAATTGGCCCATCTATGTTGGGAGTTTTGGTTGTACAATAGGGGAATCATTGATATTGATCTAAACTATTATTGAGTTCAGATGTTTGGTGTGAAAGGAGGTATGAATGTTAATAACAACACTGAACTCAAGTGTTCAACAGAAACTGGATCCATCTTAACCAATCACTTCTAATACAG

mRNA sequence

TTGGGTGTTTGGTGGTTTGGGAATTCTATGCCTTTTCATGTGAGGCCATCAATCCCCCCGTCTTTTATTTATTTATTAATTTAAAATAAAAAATAAGCAAGAACTTGGAATTTTCTCTTGCTGCCTATAAATGTTCCACAAGAAATGTCATAGACTCGAAGGCTGTTTGTGTTGAAAGGGTTATCTTATATATAATATAAATACATCAAAAGCTTATCCCATCAAAGCATCCTTTATCAATTTCTGGATTTTTCTCTGTTTCTCTCTGTTTGTGTTGCTGCTGTTCTTCATCTTCTTCTTGAATATGGGTGGATTGCTTCATCAACCTTGTTCTGTTGCTCTGTGCAAAGGGTTCCATGAAGATGATTGGGGCAAGGGCGGTGAGTATGACTACAACCTTGCCTCTTCCACATCTTCCTTCGAAGATTCAAGCAATTCGTCGGATGATGCGTGTTCATCCACTTCAAATTCTTCATCTCCATCCAATGGAGCGTTGGAGGATTTTACAGAGCTTTTTGCCCAACTCCCAATCAAGAGAGGACTGTCCATGTTCTATGAAGGGAAATCCCAGTCGTTTACATCGCTATCAAGTGTAAGAAGCATAGAAGACCTTCCGAAGAAGAGAAGCCCTTACAGCAGTAGATTAAGCGGATGTAAGAGCTATGCAGGAGGGTTGGACACCCACAAATCTGCTTATACTCTTCCCAAGGCTCCCACTTTTAAGAAGGCATCATCATCATCATCCAAAAAGATCTCTGTCTCTTGTCCCGGTTACGAGAGGCAGTGATTTGGTTGGTTGGTTGGTTGGTTGTGATAGCCTTCCATTTCTGTGTGTACATGATGTCTGAGTAGTAGGTTTACAACGTTAAATTGGCCCATCTATGTTGGGAGTTTTGGTTGTACAATAGGGGAATCATTGATATTGATCTAAACTATTATTGAGTTCAGATGTTTGGTGTGAAAGGAGGTATGAATGTTAATAACAACACTGAACTCAAGTGTTCAACAGAAACTGGATCCATCTTAACCAATCACTTCTAATACAG

Coding sequence (CDS)

ATGGGTGGATTGCTTCATCAACCTTGTTCTGTTGCTCTGTGCAAAGGGTTCCATGAAGATGATTGGGGCAAGGGCGGTGAGTATGACTACAACCTTGCCTCTTCCACATCTTCCTTCGAAGATTCAAGCAATTCGTCGGATGATGCGTGTTCATCCACTTCAAATTCTTCATCTCCATCCAATGGAGCGTTGGAGGATTTTACAGAGCTTTTTGCCCAACTCCCAATCAAGAGAGGACTGTCCATGTTCTATGAAGGGAAATCCCAGTCGTTTACATCGCTATCAAGTGTAAGAAGCATAGAAGACCTTCCGAAGAAGAGAAGCCCTTACAGCAGTAGATTAAGCGGATGTAAGAGCTATGCAGGAGGGTTGGACACCCACAAATCTGCTTATACTCTTCCCAAGGCTCCCACTTTTAAGAAGGCATCATCATCATCATCCAAAAAGATCTCTGTCTCTTGTCCCGGTTACGAGAGGCAGTGA

Protein sequence

MGGLLHQPCSVALCKGFHEDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSSSPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGCKSYAGGLDTHKSAYTLPKAPTFKKASSSSSKKISVSCPGYERQ

Homology

[Close]

BLAST of CmoCh01G000930 vs. ExPASy TrEMBL
Match: A0A6J1GAT2 (uncharacterized protein LOC111452482 OS=Cucurbita moschata OX=3662 GN=LOC111452482 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MGGLLHQPCSVALCKGFHEDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSSSPS 60
           MGGLLHQPCSVALCKGFHEDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSSSPS
Sbjct: 1   MGGLLHQPCSVALCKGFHEDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSSSPS 60

Query: 61  NGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGCKSY 120
           NGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGCKSY
Sbjct: 61  NGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGCKSY 120

Query: 121 AGGLDTHKSAYTLPKAPTFKKASSSSSKKISVSCPGYERQ 161
           AGGLDTHKSAYTLPKAPTFKKASSSSSKKISVSCPGYERQ
Sbjct: 121 AGGLDTHKSAYTLPKAPTFKKASSSSSKKISVSCPGYERQ 160

[Close]

BLAST of CmoCh01G000930 vs. ExPASy TrEMBL
Match: A0A6J1KCR8 (uncharacterized protein LOC111492699 OS=Cucurbita maxima OX=3661 GN=LOC111492699 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.6e-72
Identity = 152/164 (92.68%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 1   MGGLLHQPCSVALCKGFH---EDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSS 60
           MGG LHQPCSVALC+GFH   ED WGKGGEY YNLASSTSSFEDSSNSSDDACSSTSNSS
Sbjct: 1   MGGFLHQPCSVALCQGFHEESEDQWGKGGEYHYNLASSTSSFEDSSNSSDDACSSTSNSS 60

Query: 61  SPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC 120
           SPS GALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC
Sbjct: 61  SPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC 120

Query: 121 KSYAGGLDTHK-SAYTLPKAPTFKKASSSSSKKISVSCPGYERQ 161
           KSYAGGLDTHK +AYTLPKAP+FKKA SSSSKKISVSCPGYERQ
Sbjct: 121 KSYAGGLDTHKCAAYTLPKAPSFKKA-SSSSKKISVSCPGYERQ 163

[Close]

BLAST of CmoCh01G000930 vs. ExPASy TrEMBL
Match: A0A5D3CBD2 (Oxidative stress 3, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00260 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.6e-48
Identity = 116/163 (71.17%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 4   LLHQPCSVALCKGFH---EDDW--GKGGEYDYNLASSTSSFEDSSNSS---------DDA 63
           +LHQPCS  L + FH   ED W   KGG+  YN+ASSTSSFEDS+ SS         DDA
Sbjct: 8   MLHQPCSATLHQDFHEDLEDHWRITKGGD-QYNVASSTSSFEDSTISSESLSSSDLADDA 67

Query: 64  CSSTSNSSSPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSP 123
           CSSTSNSSS SNG LEDFT+LFAQLPIKRGLSMFY+GKS+SFTSLSSV+SIED+PKK +P
Sbjct: 68  CSSTSNSSSQSNGPLEDFTDLFAQLPIKRGLSMFYQGKSRSFTSLSSVKSIEDIPKKPNP 127

Query: 124 YSSRLSGCKSYAGGLDTHKSAYTLPKAPTFKKASSSSSKKISV 153
           YS RL+ CKSYAGGLDTHKS+YTLPKAPTFKKAS SS   + V
Sbjct: 128 YSRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVHV 169

[Close]

BLAST of CmoCh01G000930 vs. ExPASy TrEMBL
Match: A0A1S3BH50 (uncharacterized protein LOC103489976 OS=Cucumis melo OX=3656 GN=LOC103489976 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.6e-48
Identity = 116/163 (71.17%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 4   LLHQPCSVALCKGFH---EDDW--GKGGEYDYNLASSTSSFEDSSNSS---------DDA 63
           +LHQPCS  L + FH   ED W   KGG+  YN+ASSTSSFEDS+ SS         DDA
Sbjct: 8   MLHQPCSATLHQDFHEDLEDHWRITKGGD-QYNVASSTSSFEDSTISSESLSSSDLADDA 67

Query: 64  CSSTSNSSSPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSP 123
           CSSTSNSSS SNG LEDFT+LFAQLPIKRGLSMFY+GKS+SFTSLSSV+SIED+PKK +P
Sbjct: 68  CSSTSNSSSQSNGPLEDFTDLFAQLPIKRGLSMFYQGKSRSFTSLSSVKSIEDIPKKPNP 127

Query: 124 YSSRLSGCKSYAGGLDTHKSAYTLPKAPTFKKASSSSSKKISV 153
           YS RL+ CKSYAGGLDTHKS+YTLPKAPTFKKAS SS   + V
Sbjct: 128 YSRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVHV 169

[Close]

BLAST of CmoCh01G000930 vs. ExPASy TrEMBL
Match: A0A6J1DLD1 (uncharacterized protein LOC111021114 OS=Momordica charantia OX=3673 GN=LOC111021114 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.7e-45
Identity = 113/165 (68.48%), Postives = 128/165 (77.58%), Query Frame = 0


Query: 1   MGGL----LHQPCSVALCKGFH---EDDWGKGGEYDYNLASSTSSFEDSSNSS------D 60
           MGG+    L +  SVA+C+ FH   E+ W       YN+ASSTSSFEDSS SS      +
Sbjct: 1   MGGIQRQTLRESRSVAVCQEFHENLEEHWVSKRSDHYNVASSTSSFEDSSVSSGSLSSIE 60

Query: 61  DACSSTSNSSSPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKR 120
           DACSSTSN+SS S+G LEDFTEL AQLPIKRGLSMFY+GKSQSFTSLSSV+SIEDLPKK 
Sbjct: 61  DACSSTSNTSSESSGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDLPKKE 120

Query: 121 SPYSSRLSGCKSYAGGLDTHKSAYTLPKAPTFKKASSSSSKKISV 153
           +PYS RL+G KSYAGGLDTHKS+YTLPKAPTFKKAS SS   + V
Sbjct: 121 NPYSRRLNGYKSYAGGLDTHKSSYTLPKAPTFKKASRSSVSFVQV 165

[Close]

BLAST of CmoCh01G000930 vs. NCBI nr
Match: XP_022949011.1 (uncharacterized protein LOC111452482 [Cucurbita moschata])

HSP 1 Score: 312.4 bits (799), Expect = 2.3e-81
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MGGLLHQPCSVALCKGFHEDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSSSPS 60
           MGGLLHQPCSVALCKGFHEDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSSSPS
Sbjct: 1   MGGLLHQPCSVALCKGFHEDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSSSPS 60

Query: 61  NGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGCKSY 120
           NGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGCKSY
Sbjct: 61  NGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGCKSY 120

Query: 121 AGGLDTHKSAYTLPKAPTFKKASSSSSKKISVSCPGYERQ 161
           AGGLDTHKSAYTLPKAPTFKKASSSSSKKISVSCPGYERQ
Sbjct: 121 AGGLDTHKSAYTLPKAPTFKKASSSSSKKISVSCPGYERQ 160

[Close]

BLAST of CmoCh01G000930 vs. NCBI nr
Match: KAG7036459.1 (hypothetical protein SDJN02_00076 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77
Identity = 158/163 (96.93%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 1   MGGLLHQPCSVALCKGFHEDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSSSPS 60
           MGGLLHQPCSVALCKGFHEDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSSSPS
Sbjct: 1   MGGLLHQPCSVALCKGFHEDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSSSPS 60

Query: 61  NGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGCKSY 120
           NGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGCKSY
Sbjct: 61  NGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGCKSY 120

Query: 121 AGGLDTHK-SAYTLPKAPTFKKA--SSSSSKKISVSCPGYERQ 161
           AGGLDTHK +AYTLPKAP+FKKA  SSSSSKKISVSCPGYERQ
Sbjct: 121 AGGLDTHKCAAYTLPKAPSFKKASSSSSSSKKISVSCPGYERQ 163

[Close]

BLAST of CmoCh01G000930 vs. NCBI nr
Match: KAG6606744.1 (hypothetical protein SDJN03_00086, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 299.7 bits (766), Expect = 1.5e-77
Identity = 158/162 (97.53%), Postives = 159/162 (98.15%), Query Frame = 0


Query: 1   MGGLLHQPCSVALCKGFHEDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSSSPS 60
           MGGLLHQPCSVALCKGFHEDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSSSPS
Sbjct: 1   MGGLLHQPCSVALCKGFHEDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSSSPS 60

Query: 61  NGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGCKSY 120
           NGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGCKSY
Sbjct: 61  NGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGCKSY 120

Query: 121 AGGLDTHKSA-YTLPKAPTFKKA-SSSSSKKISVSCPGYERQ 161
           AGGLDTHK A YTLPKAP+FKKA SSSSSKKISVSCPGYERQ
Sbjct: 121 AGGLDTHKCASYTLPKAPSFKKASSSSSSKKISVSCPGYERQ 162

[Close]

BLAST of CmoCh01G000930 vs. NCBI nr
Match: XP_023524906.1 (uncharacterized protein LOC111788696 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.0 bits (733), Expect = 1.0e-73
Identity = 157/168 (93.45%), Postives = 159/168 (94.64%), Query Frame = 0


Query: 1   MGGLLHQPCSVALCKGFH---EDDWGKGGEY-DYNLASSTSSFEDSSNSSDDACSSTSNS 60
           MGGLLHQPCSVALCKGFH   EDDWGKGGEY  YNLASSTSSFEDSSNSSDDACSSTSNS
Sbjct: 1   MGGLLHQPCSVALCKGFHEELEDDWGKGGEYHHYNLASSTSSFEDSSNSSDDACSSTSNS 60

Query: 61  SSPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSG 120
           SSPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSG
Sbjct: 61  SSPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSG 120

Query: 121 CKSYAGGLDTHK-SAYTLPKAPTFKKA---SSSSSKKISVSCPGYERQ 161
           CKSYAGGLDTHK +AYTLPKAP+FKKA   SSSSSKKISVSCPGYERQ
Sbjct: 121 CKSYAGGLDTHKCAAYTLPKAPSFKKASSSSSSSSKKISVSCPGYERQ 168

[Close]

BLAST of CmoCh01G000930 vs. NCBI nr
Match: XP_022997869.1 (uncharacterized protein LOC111492699 [Cucurbita maxima])

HSP 1 Score: 282.0 bits (720), Expect = 3.3e-72
Identity = 152/164 (92.68%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 1   MGGLLHQPCSVALCKGFH---EDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSS 60
           MGG LHQPCSVALC+GFH   ED WGKGGEY YNLASSTSSFEDSSNSSDDACSSTSNSS
Sbjct: 1   MGGFLHQPCSVALCQGFHEESEDQWGKGGEYHYNLASSTSSFEDSSNSSDDACSSTSNSS 60

Query: 61  SPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC 120
           SPS GALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC
Sbjct: 61  SPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC 120

Query: 121 KSYAGGLDTHK-SAYTLPKAPTFKKASSSSSKKISVSCPGYERQ 161
           KSYAGGLDTHK +AYTLPKAP+FKKA SSSSKKISVSCPGYERQ
Sbjct: 121 KSYAGGLDTHKCAAYTLPKAPSFKKA-SSSSKKISVSCPGYERQ 163

[Close]

BLAST of CmoCh01G000930 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 )

HSP 1 Score: 73.2 bits (178), Expect = 2.2e-13
Identity = 57/128 (44.53%), Postives = 73/128 (57.03%), Query Frame = 0


Query: 27  EYDYNLASSTSSFEDSSNSSDDACSSTSNSSSPSNGALEDFTELFAQLPIKRGLSMFYEG 86
           E D + + S SS   S  + DD     S+SS  SNG LED ++L + LPIKRGLS FYEG
Sbjct: 40  EEDNSSSCSLSSSMCSDFTEDDDDDDVSSSS--SNGPLEDLSDLMSHLPIKRGLSKFYEG 99

Query: 87  KSQSFTSLSSVRSIEDLPK---KRSPYSSRLSGCKSYAGGLDTHKSAYTLPKAPTFKKAS 146
           KSQSFTSL +V+S+EDL K   K   Y ++    +S  G LD        PKA   KK +
Sbjct: 100 KSQSFTSLGNVKSLEDLMKRGFKSRNYGAKRKSSRSTGGILDQSYKRVFSPKATISKKPN 159

Query: 147 SSSSKKIS 152
            + S  +S
Sbjct: 160 RTPSSVLS 165

[Close]

BLAST of CmoCh01G000930 vs. TAIR 10
Match: AT4G26288.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-11
Identity = 52/121 (42.98%), Postives = 75/121 (61.98%), Query Frame = 0


Query: 32  LASSTSSFEDSSNSSDDACSSTSNSSSPSNGALEDFTELFAQLPI----KRGLSMFYEGK 91
           ++SS+S    SS+ ++DA SS+S+SSS SNG  +D ++L +QLPI    K GLS +Y+GK
Sbjct: 28  VSSSSSISMCSSDLTEDASSSSSSSSSSSNGPFDDLSDLISQLPIIQVKKGGLSKYYKGK 87

Query: 92  SQSFTSLSSVRSIEDLPKKRSPYSSRLSGCKSYAGGLDTHKSAYTLPKAPTFKKASSSSS 149
           SQSFTSL++V S++DL K+     SR   C          +  +  PKA    KA+ +SS
Sbjct: 88  SQSFTSLANVTSLQDLVKR----GSRTKSC--------CKRDYFYGPKATISMKATRTSS 136

[Close]

BLAST of CmoCh01G000930 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05
Identity = 48/122 (39.34%), Postives = 62/122 (50.82%), Query Frame = 0


Query: 32  LASSTSSFEDSSNSSDDACSSTSNSSSPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSF 91
           L+SSTSS     NS DD        SS  NG L+    L   LPIKR +S FY+GKS+SF
Sbjct: 21  LSSSTSSDSIGENSDDDEGGENEIESS-YNGPLDMMESLEEALPIKRAISKFYKGKSKSF 80

Query: 92  TSLSSVRS--IEDLPKKRSPYSSRLSGCKSY----AGGLDTHKSAYTLPKAPTFKKASSS 148
            SLS   S  ++DL K  + YS R     S+     GG+   K  +    A + ++  SS
Sbjct: 81  MSLSETSSLPVKDLTKPENLYSRRRRNLLSHRICSRGGIS--KKPFKSVLAMSQREGDSS 139

The following BLAST results are available for this feature:

BLAST of CmoCh01G000930 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G000930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAT2	1.1e-81	100.00	uncharacterized protein LOC111452482 OS=Cucurbita moschata OX=3662 GN=LOC1114524...	[more]
A0A6J1KCR8	1.6e-72	92.68	uncharacterized protein LOC111492699 OS=Cucurbita maxima OX=3661 GN=LOC111492699...	[more]
A0A5D3CBD2	3.6e-48	71.17	Oxidative stress 3, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BH50	3.6e-48	71.17	uncharacterized protein LOC103489976 OS=Cucumis melo OX=3656 GN=LOC103489976 PE=...	[more]
A0A6J1DLD1	1.7e-45	68.48	uncharacterized protein LOC111021114 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]

BLAST of CmoCh01G000930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949011.1	2.3e-81	100.00	uncharacterized protein LOC111452482 [Cucurbita moschata]	[more]
KAG7036459.1	1.2e-77	96.93	hypothetical protein SDJN02_00076 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6606744.1	1.5e-77	97.53	hypothetical protein SDJN03_00086, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023524906.1	1.0e-73	93.45	uncharacterized protein LOC111788696 [Cucurbita pepo subsp. pepo]	[more]
XP_022997869.1	3.3e-72	92.68	uncharacterized protein LOC111492699 [Cucurbita maxima]	[more]

BLAST of CmoCh01G000930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56550.1	2.2e-13	44.53	oxidative stress 3	[more]
AT4G26288.1	3.5e-11	42.98	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G43850.1	1.7e-05	39.34	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..62
None	No IPR available	PANTHER	PTHR33172	OS08G0516900 PROTEIN	coord: 34..151
None	No IPR available	PANTHER	PTHR33172:SF45	EMB\|CAB83157.1	coord: 34..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G000930.1	CmoCh01G000930.1	mRNA