CmoCh00G001250 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh00G001250
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	LOW QUALITY PROTEIN: uncharacterized protein At1g10890-like
Location	Cmo_Chr00: 23104587 .. 23105183 (-)
RNA-Seq Expression	CmoCh00G001250
Synteny	CmoCh00G001250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACAAAGATGTCTTTGAATCGAATGTTCGTATTGCATGCTATATCTCAGCTTGTAGCAGCCACTCAAACTCAATTGAAACTTATGGGGAGAAGTGGTTCAAGGTCTCTGTCATAAACTCACCGCTCCAATTCTTATCGCCATAGTCAGAGAAGCAGAAGGGACCCAAGTCCTTCCCCCTATCATTCCACTACCCATTCCAGGAGAAGCAGCCGTTCAAGTTCCCTCAGCCGCCAACGCAGAAGTAGGTCTTCCTCGTTATCTCCTTTCCCCAAATCCTTCAGTTCTAGTCCTAGTTGTGCATCCACTGATCGGAATCATTCCATAGAGAAGCTTAAGAAAGAGGAAGAAGAGAAGAAAAGGCGTGAAGCAGAGTTGAAGAAGTTAGAAGAAGATGCAGCTAGGAGGATGGAAGAACTAATTAATTCAGAAGAAGTTGAAGAAAGGCTTGAGAAAGAGAAAGAAGCCGCTCTTACTGCTACAAGACAAAAAGAAAAACAAGCACGAAAAGAGAGAGAAGAGCTAGATAAAATGCTGGAAGAGAATAGAAGAAGGGTAGAAAAAGCACAGCGACGATTAGTTCTGGAGCTGTAG

mRNA sequence

ATGGAGACAAAGATGTCTTTGAATCGAATGTTCGTATTGCATGCTATATCTCAGCTTGTAGCAGCCACTCAAACTCAATTGAAACTTATGGGGAGAAGTGGTTCAAGGAGAAGCAGCCGTTCAAGTTCCCTCAGCCGCCAACGCAGAAGTAGGTCTTCCTCGTTATCTCCTTTCCCCAAATCCTTCAGTTCTAGTCCTAGTTGTGCATCCACTGATCGGAATCATTCCATAGAGAAGCTTAAGAAAGAGGAAGAAGAGAAGAAAAGGCGTGAAGCAGAGTTGAAGAAGTTAGAAGAAGATGCAGCTAGGAGGATGGAAGAACTAATTAATTCAGAAGAAGTTGAAGAAAGGCTTGAGAAAGAGAAAGAAGCCGCTCTTACTGCTACAAGACAAAAAGAAAAACAAGCACGAAAAGAGAGAGAAGAGCTAGATAAAATGCTGGAAGAGAATAGAAGAAGGGTAGAAAAAGCACAGCGACGATTAGTTCTGGAGCTGTAG

Coding sequence (CDS)

ATGGAGACAAAGATGTCTTTGAATCGAATGTTCGTATTGCATGCTATATCTCAGCTTGTAGCAGCCACTCAAACTCAATTGAAACTTATGGGGAGAAGTGGTTCAAGGAGAAGCAGCCGTTCAAGTTCCCTCAGCCGCCAACGCAGAAGTAGGTCTTCCTCGTTATCTCCTTTCCCCAAATCCTTCAGTTCTAGTCCTAGTTGTGCATCCACTGATCGGAATCATTCCATAGAGAAGCTTAAGAAAGAGGAAGAAGAGAAGAAAAGGCGTGAAGCAGAGTTGAAGAAGTTAGAAGAAGATGCAGCTAGGAGGATGGAAGAACTAATTAATTCAGAAGAAGTTGAAGAAAGGCTTGAGAAAGAGAAAGAAGCCGCTCTTACTGCTACAAGACAAAAAGAAAAACAAGCACGAAAAGAGAGAGAAGAGCTAGATAAAATGCTGGAAGAGAATAGAAGAAGGGTAGAAAAAGCACAGCGACGATTAGTTCTGGAGCTGTAG

Protein sequence

METKMSLNRMFVLHAISQLVAATQTQLKLMGRSGSRRSSRSSSLSRQRRSRSSSLSPFPKSFSSSPSCASTDRNHSIEKLKKEEEEKKRREAELKKLEEDAARRMEELINSEEVEERLEKEKEAALTATRQKEKQARKEREELDKMLEENRRRVEKAQRRLVLEL

Homology

[Close]

BLAST of CmoCh00G001250 vs. ExPASy Swiss-Prot
Match: P0CB26 (Uncharacterized protein At1g10890 OS=Arabidopsis thaliana OX=3702 GN=At1g10890 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-06
Identity = 65/170 (38.24%), Postives = 97/170 (57.06%), Query Frame = 0


Query: 32  RSGSRRSSRSSSLSRQRRSRSSSLSPFPKSFSSSPSCA--------STDRNHSIEKLKKE 91
           RS S R  RS S++ +RRS +       KS SS+PS A         + +N + EKLK+E
Sbjct: 54  RSISPRRHRSRSVTPKRRSPTPKRYKRQKSRSSTPSPAKRSPAATLESAKNRNGEKLKRE 113

Query: 92  EEEKKR--REAELKKLEEDAARRMEELIN---------------------------SEEV 151
           EEE+KR  REAELK +EE+  +R+EE I                            +EEV
Sbjct: 114 EEERKRRQREAELKLIEEETVKRVEEAIRKKVEESLQSEKIKMEILTLLEEGRKRLNEEV 173

Query: 152 EERLEKEKEAALTATRQKEKQARKEREELDKMLEENRRRVEKAQRRLVLE 165
             +LE+EKEA+L   ++KE++ ++E+EE +++ EEN +RVE+AQR+  +E
Sbjct: 174 AAQLEEEKEASLIEAKEKEEREQQEKEERERIAEENLKRVEEAQRKEAME 223

[Close]

BLAST of CmoCh00G001250 vs. ExPASy TrEMBL
Match: A0A6J1F379 (LOW QUALITY PROTEIN: uncharacterized protein At1g10890-like OS=Cucurbita moschata OX=3662 GN=LOC111439348 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 5.4e-39
Identity = 120/158 (75.95%), Postives = 129/158 (81.65%), Query Frame = 0


Query: 35  SRRSSRSSSLSRQRRSRSSSLSPFPKSFSSSPSCASTDRNHSIEKLKKEEEEKKRREAEL 94
           SRRSSRSSSLSRQRRSRSSSLSPFPKSFS SPSCASTDRNHSIEKLKKEEEEKKRREA+L
Sbjct: 39  SRRSSRSSSLSRQRRSRSSSLSPFPKSFSFSPSCASTDRNHSIEKLKKEEEEKKRREAKL 98

Query: 95  KKLEEDAARRMEELI--------NSEE-------------------VEERLEKEKEAALT 154
           KK+EEDAARR+EELI        NSEE                   V+ +LEKEKEAALT
Sbjct: 99  KKIEEDAARRVEELIQKKMQERLNSEETKLXIXRIIEEGRTKSFVDVDVQLEKEKEAALT 158

Query: 155 ATRQKEKQARKEREELDKMLEENRRRVEKAQRRLVLEL 166
           ATRQKE+QARKEREELDKMLE++RRRVEKAQRRLVLE+
Sbjct: 159 ATRQKEEQARKEREELDKMLEKHRRRVEKAQRRLVLEV 196

[Close]

BLAST of CmoCh00G001250 vs. ExPASy TrEMBL
Match: A0A6J1F117 (uncharacterized protein At1g10890-like OS=Cucurbita moschata OX=3662 GN=LOC111438536 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.7e-37
Identity = 114/155 (73.55%), Postives = 123/155 (79.35%), Query Frame = 0


Query: 36  RRSSRSSSLSRQRRSRSSSLSPFPKSFSSSPSCASTDRNHSIEKLKKEEEEKKRREAELK 95
           RRSSRSS LSRQR+SRSSSLSPFPKSFS SPSCAST+RNHS EKLKKEEEEKKRREAELK
Sbjct: 4   RRSSRSSFLSRQRKSRSSSLSPFPKSFSFSPSCASTNRNHSKEKLKKEEEEKKRREAELK 63

Query: 96  KLEEDAARRMEELINS-------------------------EEVEERLEKEKEAALTATR 155
           KLEED ARRMEELI                           ++V+ +L+KEKEAALTATR
Sbjct: 64  KLEEDVARRMEELIQKKMKLYSEETKLEIQRRIEEGRTKLFDDVDVQLDKEKEAALTATR 123

Query: 156 QKEKQARKEREELDKMLEENRRRVEKAQRRLVLEL 166
           QKE+QARKEREELDKMLEENRRR+EKAQRRLVLEL
Sbjct: 124 QKEEQARKEREELDKMLEENRRRIEKAQRRLVLEL 158

[Close]

BLAST of CmoCh00G001250 vs. ExPASy TrEMBL
Match: A0A6J1EYS1 (uncharacterized protein At1g10890-like OS=Cucurbita moschata OX=3662 GN=LOC111439814 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 8.6e-37
Identity = 119/160 (74.38%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 35  SRRSSRSSSLSRQRRSRSSSLSPFPKSFSSSPSCASTDRNHSIEKLKKEEEEKKRREAEL 94
           SRRSSRSSSLSRQRRSRSSSLSPFP SFSSSPSCASTDRNHSIEKLKKEEEEKKRRE EL
Sbjct: 69  SRRSSRSSSLSRQRRSRSSSLSPFPISFSSSPSCASTDRNHSIEKLKKEEEEKKRREVEL 128

Query: 95  KKL--EEDAARRMEELI--------NSE-------------------EVEERLEKEKEAA 154
           KK   EEDAARRME+LI        NSE                   +++ +L+KEKEAA
Sbjct: 129 KKTNSEEDAARRMEKLIQKKVEERLNSEATKLEIQRRIEEGRTKLFDDIDVQLDKEKEAA 188

Query: 155 LTATRQKEKQARKEREELDKMLEENRRRVEKAQRRLVLEL 166
           LTATRQKE+QARKEREELDKMLEENRR VEKAQRRLVLEL
Sbjct: 189 LTATRQKEEQARKEREELDKMLEENRRMVEKAQRRLVLEL 228

[Close]

BLAST of CmoCh00G001250 vs. ExPASy TrEMBL
Match: A0A6J1IAR5 (uncharacterized protein At1g10890-like OS=Cucurbita maxima OX=3661 GN=LOC111471698 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 4.1e-31
Identity = 110/157 (70.06%), Postives = 116/157 (73.89%), Query Frame = 0


Query: 36  RRSSRSSSLSRQRRSRSSSLSPFPKSFSSSPSCASTDRNHSIEKLKKEEEEKKRREAELK 95
           RRS   +   R+RRSRSSSLSP PKS SSSPS ASTDR HSIEKLKKEEEEKKRREAELK
Sbjct: 61  RRSRSPTRRHRRRRSRSSSLSPSPKSSSSSPSRASTDRKHSIEKLKKEEEEKKRREAELK 120

Query: 96  KLEEDAARRMEELI--------NSEE-------------------VEERLEKEKEAALTA 155
           KLEEDAARRMEELI        NSEE                   V+ +LEKEKEAALTA
Sbjct: 121 KLEEDAARRMEELIQKNVEERLNSEETKLEIQRRIEEGRKKLFDDVDVQLEKEKEAALTA 180

Query: 156 TRQKEKQARKEREELDKMLEENRRRVEKAQRRLVLEL 166
            RQKE+QARKEREELDKMLEENRRRVE+AQRR  LEL
Sbjct: 181 ARQKEEQARKEREELDKMLEENRRRVEEAQRREALEL 217

[Close]

BLAST of CmoCh00G001250 vs. ExPASy TrEMBL
Match: A0A6J1EVY9 (uncharacterized protein At1g10890-like OS=Cucurbita moschata OX=3662 GN=LOC111438654 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.0e-30
Identity = 108/157 (68.79%), Postives = 115/157 (73.25%), Query Frame = 0


Query: 36  RRSSRSSSLSRQRRSRSSSLSPFPKSFSSSPSCASTDRNHSIEKLKKEEEEKKRREAELK 95
           RRS   +   R+RRSRSSSLSP PKS SSSPS ASTDR HS+EKLKKEEEEKKR EAELK
Sbjct: 61  RRSRSPTRRRRRRRSRSSSLSPSPKSSSSSPSRASTDRKHSVEKLKKEEEEKKRHEAELK 120

Query: 96  KLEEDAARRMEELI--------NSEE-------------------VEERLEKEKEAALTA 155
           KLEEDAARRMEELI        NSEE                   V+ +LEKEKEAALTA
Sbjct: 121 KLEEDAARRMEELIQKNVEERLNSEETKLEIQRRIEEGRKKLFDDVDVQLEKEKEAALTA 180

Query: 156 TRQKEKQARKEREELDKMLEENRRRVEKAQRRLVLEL 166
            RQKE+QARKEREELDKMLEENRRRVE+AQRR  LEL
Sbjct: 181 ARQKEEQARKEREELDKMLEENRRRVEEAQRREALEL 217

[Close]

BLAST of CmoCh00G001250 vs. NCBI nr
Match: XP_023552919.1 (uncharacterized protein At1g10890-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.1 bits (523), Expect = 2.4e-49
Identity = 153/225 (68.00%), Postives = 158/225 (70.22%), Query Frame = 0


Query: 1   METKMSLNRMFVLHAISQLVAATQTQLKLMGRSG-------------------------- 60
           METKMSLNRMFVLHAISQ VAA QTQLKLMG+SG                          
Sbjct: 1   METKMSLNRMFVLHAISQPVAAVQTQLKLMGKSGSRSLSYTYRSNSYRHSQRSRRDPSSS 60

Query: 61  -------SRRSSRSSSLSRQRRSRSSSLSPFPKSFSSSPSCASTDRNHSIEKLKKEEEEK 120
                  SRRSSRSSSLSRQRRSRSSSLSPFPKS SSSPS ASTDRNHSIEKLKKEEEEK
Sbjct: 61  PYHSTTNSRRSSRSSSLSRQRRSRSSSLSPFPKSSSSSPSRASTDRNHSIEKLKKEEEEK 120

Query: 121 KRREAELKKLEEDAARRMEELI--------NSEE-------------------VEERLEK 166
           KRRE ELKKLEEDA RRMEELI        NSEE                   V+ +LEK
Sbjct: 121 KRRETELKKLEEDATRRMEELIQKNVEERLNSEETKLEIQRRIEEGRTKLFDDVDVQLEK 180

[Close]

BLAST of CmoCh00G001250 vs. NCBI nr
Match: XP_023520785.1 (uncharacterized protein At1g10890-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 205.7 bits (522), Expect = 3.1e-49
Identity = 153/225 (68.00%), Postives = 158/225 (70.22%), Query Frame = 0


Query: 1   METKMSLNRMFVLHAISQLVAATQTQLKLMGRSG-------------------------- 60
           METKMSLNRMFVLHAISQ VAA QTQLKLMG+SG                          
Sbjct: 1   METKMSLNRMFVLHAISQPVAAVQTQLKLMGKSGSRSLSYTHRSNSYRHSQRSIRDPSSS 60

Query: 61  -------SRRSSRSSSLSRQRRSRSSSLSPFPKSFSSSPSCASTDRNHSIEKLKKEEEEK 120
                  SRRSSRSSSLSRQRRSRSSSLSPFPKS SSSPS ASTDRNHSIEKLKKEEEEK
Sbjct: 61  PYHSTTNSRRSSRSSSLSRQRRSRSSSLSPFPKSSSSSPSRASTDRNHSIEKLKKEEEEK 120

Query: 121 KRREAELKKLEEDAARRMEELI--------NSEE-------------------VEERLEK 166
           KRRE ELKKLEEDA RRMEELI        NS+E                   V+ +LEK
Sbjct: 121 KRRETELKKLEEDATRRMEELIQKNVEERLNSKETKLEIQRRIEEGRTKLFDDVDVQLEK 180

[Close]

BLAST of CmoCh00G001250 vs. NCBI nr
Match: XP_022932840.1 (LOW QUALITY PROTEIN: uncharacterized protein At1g10890-like, partial [Cucurbita moschata])

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-38
Identity = 120/158 (75.95%), Postives = 129/158 (81.65%), Query Frame = 0


Query: 35  SRRSSRSSSLSRQRRSRSSSLSPFPKSFSSSPSCASTDRNHSIEKLKKEEEEKKRREAEL 94
           SRRSSRSSSLSRQRRSRSSSLSPFPKSFS SPSCASTDRNHSIEKLKKEEEEKKRREA+L
Sbjct: 39  SRRSSRSSSLSRQRRSRSSSLSPFPKSFSFSPSCASTDRNHSIEKLKKEEEEKKRREAKL 98

Query: 95  KKLEEDAARRMEELI--------NSEE-------------------VEERLEKEKEAALT 154
           KK+EEDAARR+EELI        NSEE                   V+ +LEKEKEAALT
Sbjct: 99  KKIEEDAARRVEELIQKKMQERLNSEETKLXIXRIIEEGRTKSFVDVDVQLEKEKEAALT 158

Query: 155 ATRQKEKQARKEREELDKMLEENRRRVEKAQRRLVLEL 166
           ATRQKE+QARKEREELDKMLE++RRRVEKAQRRLVLE+
Sbjct: 159 ATRQKEEQARKEREELDKMLEKHRRRVEKAQRRLVLEV 196

[Close]

BLAST of CmoCh00G001250 vs. NCBI nr
Match: XP_023552136.1 (uncharacterized protein At1g10890-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.9 bits (429), Expect = 1.9e-38
Identity = 123/158 (77.85%), Postives = 126/158 (79.75%), Query Frame = 0


Query: 35  SRRSSRSSSLSRQRRSRSSSLSPFPKSFSSSPSCASTDRNHSIEKLKKEEEEKKRREAEL 94
           SRRSSRSSSLSRQRRSRSSSLSPFPKS SSSPS ASTDRNHSIEKLKKEEEE KRRE EL
Sbjct: 39  SRRSSRSSSLSRQRRSRSSSLSPFPKSSSSSPSHASTDRNHSIEKLKKEEEEMKRRETEL 98

Query: 95  KKLEEDAARRMEELI--------NSEE-------------------VEERLEKEKEAALT 154
           KKLEEDAARRMEELI        NSEE                   V+ +LEKEKEAALT
Sbjct: 99  KKLEEDAARRMEELIQKNVEERLNSEETKLEIQRRIEEGRTKLFDDVDVQLEKEKEAALT 158

Query: 155 ATRQKEKQARKEREELDKMLEENRRRVEKAQRRLVLEL 166
           ATRQKE+QARKEREELDKMLEENRRRVEKAQRRLVLEL
Sbjct: 159 ATRQKEEQARKEREELDKMLEENRRRVEKAQRRLVLEL 196

[Close]

BLAST of CmoCh00G001250 vs. NCBI nr
Match: XP_022932213.1 (uncharacterized protein At1g10890-like, partial [Cucurbita moschata])

HSP 1 Score: 165.6 bits (418), Expect = 3.6e-37
Identity = 114/155 (73.55%), Postives = 123/155 (79.35%), Query Frame = 0


Query: 36  RRSSRSSSLSRQRRSRSSSLSPFPKSFSSSPSCASTDRNHSIEKLKKEEEEKKRREAELK 95
           RRSSRSS LSRQR+SRSSSLSPFPKSFS SPSCAST+RNHS EKLKKEEEEKKRREAELK
Sbjct: 4   RRSSRSSFLSRQRKSRSSSLSPFPKSFSFSPSCASTNRNHSKEKLKKEEEEKKRREAELK 63

Query: 96  KLEEDAARRMEELINS-------------------------EEVEERLEKEKEAALTATR 155
           KLEED ARRMEELI                           ++V+ +L+KEKEAALTATR
Sbjct: 64  KLEEDVARRMEELIQKKMKLYSEETKLEIQRRIEEGRTKLFDDVDVQLDKEKEAALTATR 123

Query: 156 QKEKQARKEREELDKMLEENRRRVEKAQRRLVLEL 166
           QKE+QARKEREELDKMLEENRRR+EKAQRRLVLEL
Sbjct: 124 QKEEQARKEREELDKMLEENRRRIEKAQRRLVLEL 158

[Close]

BLAST of CmoCh00G001250 vs. TAIR 10
Match: AT5G13340.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 5.5e-12
Identity = 75/170 (44.12%), Postives = 98/170 (57.65%), Query Frame = 0


Query: 33  SGSRRSSRSSSLSRQRRSRSSSLSPFPKSFSSSPSCASTDRNHSIE--------KLKKEE 92
           S S  + RSS  +R+ RSRS   S   KS S +P     DR+ S+         ++KKE+
Sbjct: 18  SRSPVTHRSSRRTRRDRSRSPYTSRHKKSRSPAPRQHQRDRSSSLSPSEHRIAIEVKKEQ 77

Query: 93  EEKKR--REAELKKLEEDAARRMEELIN------------SEEVEER------------- 152
           E+K R   EAELK+LEE+ A+R+EE +              EE+E R             
Sbjct: 78  EDKARLQHEAELKRLEEETAQRIEEAVRKNVEERMKTEEVKEEIERRTKEAYEKMFLDVE 137

Query: 153 --LEKEKEAALTATRQKEKQARKEREELDKMLEENRRRVEKAQRRLVLEL 166
             L+KEKEAAL   R+KE+QAR+EREELDKMLEEN RRVE++QRR  +EL
Sbjct: 138 IQLKKEKEAALNEARRKEEQARREREELDKMLEENSRRVEESQRREAMEL 187

[Close]

BLAST of CmoCh00G001250 vs. TAIR 10
Match: AT1G10890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: petal, flower, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13340.1); Has 11769 Blast hits to 8435 proteins in 698 species: Archae - 22; Bacteria - 971; Metazoa - 5937; Fungi - 1065; Plants - 592; Viruses - 101; Other Eukaryotes - 3081 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05
Identity = 65/178 (36.52%), Postives = 97/178 (54.49%), Query Frame = 0


Query: 32  RSGSRRSSRSSSLSRQRRSRSSSLSPFPKSFSSSPSCA--------STDRNHSIEKLKKE 91
           RS S R  RS S++ +RRS +       KS SS+PS A         + +N + EKLK+E
Sbjct: 54  RSISPRRHRSRSVTPKRRSPTPKRYKRQKSRSSTPSPAKRSPAATLESAKNRNGEKLKRE 113

Query: 92  EEEKKR--REAELKKLEEDAARRMEELIN---------------------------SEEV 151
           EEE+KR  REAELK +EE+  +R+EE I                            +EEV
Sbjct: 114 EEERKRRQREAELKLIEEETVKRVEEAIRKKVEESLQSEKIKMEILTLLEEGRKRLNEEV 173

Query: 152 EERLEKEKEAALTATRQKE--------KQARKEREELDKMLEENRRRVEKAQRRLVLE 165
             +LE+EKEA+L   ++KE        ++ ++E+EE +++ EEN +RVE+AQR+  +E
Sbjct: 174 AAQLEEEKEASLIEAKEKEGVMRCLSQEREQQEKEERERIAEENLKRVEEAQRKEAME 231

The following BLAST results are available for this feature:

BLAST of CmoCh00G001250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CB26	1.5e-06	38.24	Uncharacterized protein At1g10890 OS=Arabidopsis thaliana OX=3702 GN=At1g10890 P...	[more]

BLAST of CmoCh00G001250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F379	5.4e-39	75.95	LOW QUALITY PROTEIN: uncharacterized protein At1g10890-like OS=Cucurbita moschat...	[more]
A0A6J1F117	1.7e-37	73.55	uncharacterized protein At1g10890-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1EYS1	8.6e-37	74.38	uncharacterized protein At1g10890-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1IAR5	4.1e-31	70.06	uncharacterized protein At1g10890-like OS=Cucurbita maxima OX=3661 GN=LOC1114716...	[more]
A0A6J1EVY9	2.0e-30	68.79	uncharacterized protein At1g10890-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of CmoCh00G001250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552919.1	2.4e-49	68.00	uncharacterized protein At1g10890-like [Cucurbita pepo subsp. pepo]	[more]
XP_023520785.1	3.1e-49	68.00	uncharacterized protein At1g10890-like [Cucurbita pepo subsp. pepo]	[more]
XP_022932840.1	1.1e-38	75.95	LOW QUALITY PROTEIN: uncharacterized protein At1g10890-like, partial [Cucurbita ...	[more]
XP_023552136.1	1.9e-38	77.85	uncharacterized protein At1g10890-like [Cucurbita pepo subsp. pepo]	[more]
XP_022932213.1	3.6e-37	73.55	uncharacterized protein At1g10890-like, partial [Cucurbita moschata]	[more]

BLAST of CmoCh00G001250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13340.1	5.5e-12	44.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G10890.1	1.7e-05	36.52	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 73..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..88
None	No IPR available	PANTHER	PTHR31711:SF2	ARGININE/GLUTAMATE-RICH 1 PROTEIN	coord: 112..165 coord: 32..119
IPR033371	Arginine and glutamate-rich protein 1	PANTHER	PTHR31711	ARGININE AND GLUTAMATE-RICH PROTEIN 1	coord: 112..165 coord: 32..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh00G001250.1	CmoCh00G001250.1	mRNA