CmoCh00G001070 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh00G001070
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ATP synthase subunit alpha, chloroplastic
Location	Cmo_Chr00: 19022434 .. 19023027 (+)
RNA-Seq Expression	CmoCh00G001070
Synteny	CmoCh00G001070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGATGGTTTGCTGATACAAGAGGGAAGTTCTGTAAAAGTAACGGGAAGAATTGCTCAGATACCAGTAAGCGAGGCTTATTTAGGTCGTGTTATAAACGCCCTGGCTAAACCTATTGATGGCCGAGGTGAAATTTCAGCTTCTGACTCTCGGTTAATTGAATCCCCCGCTCCTGGTATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAACAGGACTTATTGCTATTGATGCGATGATTCCTATCGGACGTGGTCAACAAGAATTAATTATTGGGGACAGGCAGACCGGTAAAACTGCAGTAGCCACGGATACCATTTTGAATCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTATTAGACAAAAAGCCTCTTCTGTGGCTCAAGTAGTTACTACTTTACACGAAAGGGAGGCAATGGAATACACTATTATAGTAGCCGAAATGGTAGATTCTCGGGCTACATTACAATACCTTGCCCCTTATACAGGAGCAGCTTTGGCTGAATATTTTATGTACAGAAAACAACACACTTTAATCATTTATGATGATCCCTCCAAACAAGCACAAGAAAAATATTTTTAA

mRNA sequence

ATGTGTGATGGTTTGCTGATACAAGAGGGAAGTTCTGTAAAAGTAACGGGAAGAATTGCTCAGATACCAGTAAGCGAGGCTTATTTAGGTCGTGTTATAAACGCCCTGGCTAAACCTATTGATGGCCGAGGTGAAATTTCAGCTTCTGACTCTCGGTTAATTGAATCCCCCGCTCCTGGTATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAACAGGACTTATTGCTATTGATGCGATGATTCCTATCGGACGTGGTCAACAAGAATTAATTATTGGGGACAGGCAGACCGGTAAAACTGCAGTAGCCACGGATACCATTTTGAATCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTATTAGACAAAAAGCCTCTTCTGTGGCTCAAGTAGTTACTACTTTACACGAAAGGGAGGCAATGGAATACACTATTATAGTAGCCGAAATGGTAGATTCTCGGGCTACATTACAATACCTTGCCCCTTATACAGGAGCAGCTTTGGCTGAATATTTTATGTACAGAAAACAACACACTTTAATCATTTATGATGATCCCTCCAAACAAGCACAAGAAAAATATTTTTAA

Coding sequence (CDS)

ATGTGTGATGGTTTGCTGATACAAGAGGGAAGTTCTGTAAAAGTAACGGGAAGAATTGCTCAGATACCAGTAAGCGAGGCTTATTTAGGTCGTGTTATAAACGCCCTGGCTAAACCTATTGATGGCCGAGGTGAAATTTCAGCTTCTGACTCTCGGTTAATTGAATCCCCCGCTCCTGGTATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAACAGGACTTATTGCTATTGATGCGATGATTCCTATCGGACGTGGTCAACAAGAATTAATTATTGGGGACAGGCAGACCGGTAAAACTGCAGTAGCCACGGATACCATTTTGAATCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTATTAGACAAAAAGCCTCTTCTGTGGCTCAAGTAGTTACTACTTTACACGAAAGGGAGGCAATGGAATACACTATTATAGTAGCCGAAATGGTAGATTCTCGGGCTACATTACAATACCTTGCCCCTTATACAGGAGCAGCTTTGGCTGAATATTTTATGTACAGAAAACAACACACTTTAATCATTTATGATGATCCCTCCAAACAAGCACAAGAAAAATATTTTTAA

Protein sequence

MCDGLLIQEGSSVKVTGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPGIISRRSVYEPLQTGLIAIDAMIPIGRGQQELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIRQKASSVAQVVTTLHEREAMEYTIIVAEMVDSRATLQYLAPYTGAALAEYFMYRKQHTLIIYDDPSKQAQEKYF

Homology

[Close]

BLAST of CmoCh00G001070 vs. ExPASy Swiss-Prot
Match: Q0ZJ35 (ATP synthase subunit alpha, chloroplastic OS=Vitis vinifera OX=29760 GN=atpA PE=3 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.3e-92
Identity = 178/193 (92.23%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MCDGLLIQEGSSVKVTGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 60
           M DGL+IQEGSSVK TGRIAQIPVSEAYLGRVINALAKPIDGRGEISAS+SRLIESPAPG
Sbjct: 77  MGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPG 136

Query: 61  IISRRSVYEPLQTGLIAIDAMIPIGRGQQELIIGDRQTGKTAVATDTILNQQGQNVICVY 120
           IISRRSVYEPLQTGLIAID+MIPIGRGQ+ELIIGDRQTGKTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIRQKASSVAQVVTTLHEREAMEYTIIVAEMVDSRATLQYLAPYTGAALAEYFMYRKQH 180
           VAI QKASSVAQVVTT  ER AMEYTI+VAE  DS ATLQYLAPYTGAALAEYFMYRK+H
Sbjct: 197 VAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRKRH 256

Query: 181 TLIIYDDPSKQAQ 194
           TLIIYDDPSKQAQ
Sbjct: 257 TLIIYDDPSKQAQ 269

[Close]

BLAST of CmoCh00G001070 vs. ExPASy Swiss-Prot
Match: Q2QDA3 (ATP synthase subunit alpha, chloroplastic OS=Cucumis sativus OX=3659 GN=atpA PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 3.7e-92
Identity = 179/193 (92.75%), Postives = 183/193 (94.82%), Query Frame = 0


Query: 1   MCDGLLIQEGSSVKVTGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 60
           M DGLLIQEGSSVK TGRIAQIPVSEAYLGRVINALAKPIDGRGEIS+SDSRLIESPAPG
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSDSRLIESPAPG 136

Query: 61  IISRRSVYEPLQTGLIAIDAMIPIGRGQQELIIGDRQTGKTAVATDTILNQQGQNVICVY 120
           II RRSVYEPLQTGLIAID+MIPIGRGQ+ELIIGDRQTGKTAVATDTILNQQGQNVICVY
Sbjct: 137 IILRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIRQKASSVAQVVTTLHEREAMEYTIIVAEMVDSRATLQYLAPYTGAALAEYFMYRKQH 180
           VAI QKASSVAQVV+TL ER AMEYTIIVAE  DS ATLQYLAPYTGAALAEYFMYRKQH
Sbjct: 197 VAIGQKASSVAQVVSTLQERGAMEYTIIVAETADSPATLQYLAPYTGAALAEYFMYRKQH 256

Query: 181 TLIIYDDPSKQAQ 194
           T IIYDDPSKQAQ
Sbjct: 257 TSIIYDDPSKQAQ 269

[Close]

BLAST of CmoCh00G001070 vs. ExPASy Swiss-Prot
Match: A6MMS9 (ATP synthase subunit alpha, chloroplastic OS=Illicium oligandrum OX=145286 GN=atpA PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.1e-91
Identity = 176/193 (91.19%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MCDGLLIQEGSSVKVTGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 60
           M DGL+IQEGSSVK TGRIAQIPVSEAYLGRVINALAKPIDGRGEISAS+SRLIESPAPG
Sbjct: 77  MGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPG 136

Query: 61  IISRRSVYEPLQTGLIAIDAMIPIGRGQQELIIGDRQTGKTAVATDTILNQQGQNVICVY 120
           IISRRSVYEPLQTGLIAID+MIPIGRGQ+ELIIGDRQTGKTAVATDTILNQ+GQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQNVICVY 196

Query: 121 VAIRQKASSVAQVVTTLHEREAMEYTIIVAEMVDSRATLQYLAPYTGAALAEYFMYRKQH 180
           VAI QKASSVAQVVTT  ER AMEYTI+VAE  DS ATLQYLAPYTGAALAEYFMYR++H
Sbjct: 197 VAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERH 256

Query: 181 TLIIYDDPSKQAQ 194
           TLIIYDDPSKQAQ
Sbjct: 257 TLIIYDDPSKQAQ 269

[Close]

BLAST of CmoCh00G001070 vs. ExPASy Swiss-Prot
Match: B1A920 (ATP synthase subunit alpha, chloroplastic OS=Carica papaya OX=3649 GN=atpA PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.4e-91
Identity = 176/193 (91.19%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MCDGLLIQEGSSVKVTGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 60
           M DGL+IQEGSSVK TG+IAQIPVSEAYLGRVINALAKPIDGRGEISAS+SRLIESPAPG
Sbjct: 77  MGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPG 136

Query: 61  IISRRSVYEPLQTGLIAIDAMIPIGRGQQELIIGDRQTGKTAVATDTILNQQGQNVICVY 120
           IISRRSVYEPLQTGLIAID+MIPIGRGQ+ELIIGDRQTGKTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIRQKASSVAQVVTTLHEREAMEYTIIVAEMVDSRATLQYLAPYTGAALAEYFMYRKQH 180
           VAI QKASSVAQVVTTL ER AM+YTI+VAE  DS ATLQYLAPYTGAALAE+FMY KQH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMDYTIVVAETADSPATLQYLAPYTGAALAEFFMYLKQH 256

Query: 181 TLIIYDDPSKQAQ 194
           TLIIYDDPSKQAQ
Sbjct: 257 TLIIYDDPSKQAQ 269

[Close]

BLAST of CmoCh00G001070 vs. ExPASy Swiss-Prot
Match: Q06RE6 (ATP synthase subunit alpha, chloroplastic OS=Jasminum nudiflorum OX=126431 GN=atpA PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.4e-91
Identity = 176/193 (91.19%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MCDGLLIQEGSSVKVTGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 60
           M DGL+I+EGSSVK TGRIAQIPVSEAYLGRV+NALAKPIDGRGEISAS+SRLIESPAPG
Sbjct: 77  MGDGLMIEEGSSVKATGRIAQIPVSEAYLGRVLNALAKPIDGRGEISASESRLIESPAPG 136

Query: 61  IISRRSVYEPLQTGLIAIDAMIPIGRGQQELIIGDRQTGKTAVATDTILNQQGQNVICVY 120
           IISRRSVYEPLQTGL+AID+MIPIGRGQ+ELIIGDRQTGKTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLVAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIRQKASSVAQVVTTLHEREAMEYTIIVAEMVDSRATLQYLAPYTGAALAEYFMYRKQH 180
           VAI QKASSVAQVVTTL E  AMEYTI+VAEM DS ATLQYLAPYTGAALAEYFMYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQEGGAMEYTIVVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

Query: 181 TLIIYDDPSKQAQ 194
           TLIIYDD SKQAQ
Sbjct: 257 TLIIYDDLSKQAQ 269

[Close]

BLAST of CmoCh00G001070 vs. ExPASy TrEMBL
Match: A0A0S2IG79 (ATP synthase subunit alpha OS=Cucurbita moschata OX=3662 GN=atpA PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 7.7e-93
Identity = 185/193 (95.85%), Postives = 186/193 (96.37%), Query Frame = 0


Query: 1   MCDGLLIQEGSSVKVTGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 60
           M DGLLIQEGSSVK TGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 136

Query: 61  IISRRSVYEPLQTGLIAIDAMIPIGRGQQELIIGDRQTGKTAVATDTILNQQGQNVICVY 120
           IISRRSVYEPLQTGLIAIDAMIPIGRGQ+ELIIGDRQTGKTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIRQKASSVAQVVTTLHEREAMEYTIIVAEMVDSRATLQYLAPYTGAALAEYFMYRKQH 180
           VAI QKASSVAQVVTTL ER AMEYTIIVAEM DS ATLQYLAPYTGAALAEYFMYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIIVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

Query: 181 TLIIYDDPSKQAQ 194
           TLIIYDDPSKQAQ
Sbjct: 257 TLIIYDDPSKQAQ 269

[Close]

BLAST of CmoCh00G001070 vs. ExPASy TrEMBL
Match: A0A0S2IE22 (ATP synthase subunit alpha OS=Cucurbita argyrosperma OX=34294 GN=atpA PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 7.7e-93
Identity = 185/193 (95.85%), Postives = 186/193 (96.37%), Query Frame = 0


Query: 1   MCDGLLIQEGSSVKVTGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 60
           M DGLLIQEGSSVK TGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 136

Query: 61  IISRRSVYEPLQTGLIAIDAMIPIGRGQQELIIGDRQTGKTAVATDTILNQQGQNVICVY 120
           IISRRSVYEPLQTGLIAIDAMIPIGRGQ+ELIIGDRQTGKTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIRQKASSVAQVVTTLHEREAMEYTIIVAEMVDSRATLQYLAPYTGAALAEYFMYRKQH 180
           VAI QKASSVAQVVTTL ER AMEYTIIVAEM DS ATLQYLAPYTGAALAEYFMYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIIVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

Query: 181 TLIIYDDPSKQAQ 194
           TLIIYDDPSKQAQ
Sbjct: 257 TLIIYDDPSKQAQ 269

[Close]

BLAST of CmoCh00G001070 vs. ExPASy TrEMBL
Match: A0A2H4T1V9 (ATP synthase subunit alpha, chloroplastic OS=Cucurbita maxima OX=3661 GN=atpA PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 7.7e-93
Identity = 185/193 (95.85%), Postives = 186/193 (96.37%), Query Frame = 0


Query: 1   MCDGLLIQEGSSVKVTGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 60
           M DGLLIQEGSSVK TGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 136

Query: 61  IISRRSVYEPLQTGLIAIDAMIPIGRGQQELIIGDRQTGKTAVATDTILNQQGQNVICVY 120
           IISRRSVYEPLQTGLIAIDAMIPIGRGQ+ELIIGDRQTGKTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIRQKASSVAQVVTTLHEREAMEYTIIVAEMVDSRATLQYLAPYTGAALAEYFMYRKQH 180
           VAI QKASSVAQVVTTL ER AMEYTIIVAEM DS ATLQYLAPYTGAALAEYFMYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIIVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

Query: 181 TLIIYDDPSKQAQ 194
           TLIIYDDPSKQAQ
Sbjct: 257 TLIIYDDPSKQAQ 269

[Close]

BLAST of CmoCh00G001070 vs. ExPASy TrEMBL
Match: A0A0S2IHI4 (ATP synthase subunit alpha OS=Cucurbita pepo var. texana OX=37651 GN=atpA PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 7.7e-93
Identity = 185/193 (95.85%), Postives = 186/193 (96.37%), Query Frame = 0


Query: 1   MCDGLLIQEGSSVKVTGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 60
           M DGLLIQEGSSVK TGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 136

Query: 61  IISRRSVYEPLQTGLIAIDAMIPIGRGQQELIIGDRQTGKTAVATDTILNQQGQNVICVY 120
           IISRRSVYEPLQTGLIAIDAMIPIGRGQ+ELIIGDRQTGKTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIRQKASSVAQVVTTLHEREAMEYTIIVAEMVDSRATLQYLAPYTGAALAEYFMYRKQH 180
           VAI QKASSVAQVVTTL ER AMEYTIIVAEM DS ATLQYLAPYTGAALAEYFMYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIIVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

Query: 181 TLIIYDDPSKQAQ 194
           TLIIYDDPSKQAQ
Sbjct: 257 TLIIYDDPSKQAQ 269

[Close]

BLAST of CmoCh00G001070 vs. ExPASy TrEMBL
Match: A0A0S2IH79 (ATP synthase subunit alpha OS=Cucurbita pepo subsp. fraterna OX=37649 GN=atpA PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 7.7e-93
Identity = 185/193 (95.85%), Postives = 186/193 (96.37%), Query Frame = 0


Query: 1   MCDGLLIQEGSSVKVTGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 60
           M DGLLIQEGSSVK TGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG
Sbjct: 77  MGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 136

Query: 61  IISRRSVYEPLQTGLIAIDAMIPIGRGQQELIIGDRQTGKTAVATDTILNQQGQNVICVY 120
           IISRRSVYEPLQTGLIAIDAMIPIGRGQ+ELIIGDRQTGKTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIRQKASSVAQVVTTLHEREAMEYTIIVAEMVDSRATLQYLAPYTGAALAEYFMYRKQH 180
           VAI QKASSVAQVVTTL ER AMEYTIIVAEM DS ATLQYLAPYTGAALAEYFMYRKQH
Sbjct: 197 VAIGQKASSVAQVVTTLQERGAMEYTIIVAEMADSPATLQYLAPYTGAALAEYFMYRKQH 256

Query: 181 TLIIYDDPSKQAQ 194
           TLIIYDDPSKQAQ
Sbjct: 257 TLIIYDDPSKQAQ 269

[Close]

BLAST of CmoCh00G001070 vs. TAIR 10
Match: ATCG00120.1 (ATP synthase subunit alpha )

HSP 1 Score: 332.0 bits (850), Expect = 3.2e-91
Identity = 174/193 (90.16%), Postives = 183/193 (94.82%), Query Frame = 0


Query: 1   MCDGLLIQEGSSVKVTGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPG 60
           M DGL+IQEGSSVK TG+IAQIPVSEAYLGRVINALA PIDGRG+ISAS+SRLIESPAPG
Sbjct: 77  MGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESRLIESPAPG 136

Query: 61  IISRRSVYEPLQTGLIAIDAMIPIGRGQQELIIGDRQTGKTAVATDTILNQQGQNVICVY 120
           IISRRSVYEPLQTGLIAID+MIPIGRGQ+ELIIGDRQTGKTAVATDTILNQQGQNVICVY
Sbjct: 137 IISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVY 196

Query: 121 VAIRQKASSVAQVVTTLHEREAMEYTIIVAEMVDSRATLQYLAPYTGAALAEYFMYRKQH 180
           VAI QKASSVAQVVT+L ER AMEYTI+VAE  DS ATLQYLAPYTGAALAEYFMYR+QH
Sbjct: 197 VAIGQKASSVAQVVTSLQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYREQH 256

Query: 181 TLIIYDDPSKQAQ 194
           TLIIYDD SKQAQ
Sbjct: 257 TLIIYDDLSKQAQ 269

[Close]

BLAST of CmoCh00G001070 vs. TAIR 10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein )

HSP 1 Score: 207.6 bits (527), Expect = 9.1e-54
Identity = 105/195 (53.85%), Postives = 138/195 (70.77%), Query Frame = 0


Query: 7   IQEGSSVKVTGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPGIISRRS 66
           I+EG  VK TG I  +P  +A LGRV++A+  PIDG+G +S  + R +E  APGI+ R+S
Sbjct: 354 IKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKGALSDHEQRRVEVKAPGILERKS 413

Query: 67  VYEPLQTGLIAIDAMIPIGRGQQELIIGDRQTGKTAVATDTILNQ---------QGQNVI 126
           V+EP+QTGL A+D+++PIGRGQ+EL+IGDRQTGKT +A DTILNQ         + + + 
Sbjct: 414 VHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGKTTIAIDTILNQKQINSRATSESETMY 473

Query: 127 CVYVAIRQKASSVAQVVTTLHEREAMEYTIIVAEMVDSRATLQYLAPYTGAALAEYFMYR 186
           CVYVAI QK S+V Q++ TL E  A+EY+I+VA      A LQ+LAPY+G A+ EYF   
Sbjct: 474 CVYVAIGQKRSTVGQLIQTLEEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDN 533

Query: 187 KQHTLIIYDDPSKQA 193
             H LIIYDD SKQA
Sbjct: 534 GMHALIIYDDLSKQA 548

[Close]

BLAST of CmoCh00G001070 vs. TAIR 10
Match: ATMG01190.1 (ATP synthase subunit 1 )

HSP 1 Score: 204.9 bits (520), Expect = 5.9e-53
Identity = 104/195 (53.33%), Postives = 137/195 (70.26%), Query Frame = 0


Query: 7   IQEGSSVKVTGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPGIISRRS 66
           I+EG  VK TG I  +P  +A LGRV++A+  PIDG+G +S  + R +E  APGI+ R+S
Sbjct: 84  IKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKGALSDHEQRRVEVKAPGILERKS 143

Query: 67  VYEPLQTGLIAIDAMIPIGRGQQELIIGDRQTGKTAVATDTILNQ---------QGQNVI 126
           V+EP+QTGL A+D+++PIGRGQ+EL+IG RQTGKT +A DTILNQ         + + + 
Sbjct: 144 VHEPMQTGLKAVDSLVPIGRGQRELLIGGRQTGKTTIAIDTILNQKQINSRATSESETMY 203

Query: 127 CVYVAIRQKASSVAQVVTTLHEREAMEYTIIVAEMVDSRATLQYLAPYTGAALAEYFMYR 186
           CVYVAI QK S+V Q++ TL E  A+EY+I+VA      A LQ+LAPY+G A+ EYF   
Sbjct: 204 CVYVAIGQKRSTVGQLIQTLEEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDN 263

Query: 187 KQHTLIIYDDPSKQA 193
             H LIIYDD SKQA
Sbjct: 264 GMHALIIYDDLSKQA 278

[Close]

BLAST of CmoCh00G001070 vs. TAIR 10
Match: AT5G08670.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-10
Identity = 48/187 (25.67%), Postives = 81/187 (43.32%), Query Frame = 0


Query: 10  GSSVKVTGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPGIISRRSVYE 69
           G  V  TG    +PV  A LGR++N L +PID RGEI       I   AP ++   +  E
Sbjct: 147 GRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQE 206

Query: 70  PLQTGLIAIDAMIPIGRGQQELIIGDRQTGKTAVATDTILN-QQGQNVICVYVAIRQKA- 129
            L TG+  +D + P  RG +  + G    GKT +  + I N  +      V+  + ++  
Sbjct: 207 ILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTR 266

Query: 130 -------SSVAQVVTTLHEREAMEYTIIVAEMVDSRATLQYLAPYTGAALAEYFMYRKQH 188
                    +   V  L E+++     +V   ++     +     TG  +AEYF   +  
Sbjct: 267 EGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQ 326

[Close]

BLAST of CmoCh00G001070 vs. TAIR 10
Match: AT5G08680.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-10
Identity = 48/187 (25.67%), Postives = 81/187 (43.32%), Query Frame = 0


Query: 10  GSSVKVTGRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPGIISRRSVYE 69
           G  V  TG    +PV  A LGR++N L +PID RGEI       I   AP ++   +  E
Sbjct: 150 GRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQE 209

Query: 70  PLQTGLIAIDAMIPIGRGQQELIIGDRQTGKTAVATDTILN-QQGQNVICVYVAIRQKA- 129
            L TG+  +D + P  RG +  + G    GKT +  + I N  +      V+  + ++  
Sbjct: 210 ILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTR 269

Query: 130 -------SSVAQVVTTLHEREAMEYTIIVAEMVDSRATLQYLAPYTGAALAEYFMYRKQH 188
                    +   V  L E+++     +V   ++     +     TG  +AEYF   +  
Sbjct: 270 EGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQ 329

The following BLAST results are available for this feature:

BLAST of CmoCh00G001070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0ZJ35	1.3e-92	92.23	ATP synthase subunit alpha, chloroplastic OS=Vitis vinifera OX=29760 GN=atpA PE=...	[more]
Q2QDA3	3.7e-92	92.75	ATP synthase subunit alpha, chloroplastic OS=Cucumis sativus OX=3659 GN=atpA PE=...	[more]
A6MMS9	1.1e-91	91.19	ATP synthase subunit alpha, chloroplastic OS=Illicium oligandrum OX=145286 GN=at...	[more]
B1A920	1.4e-91	91.19	ATP synthase subunit alpha, chloroplastic OS=Carica papaya OX=3649 GN=atpA PE=3 ...	[more]
Q06RE6	1.4e-91	91.19	ATP synthase subunit alpha, chloroplastic OS=Jasminum nudiflorum OX=126431 GN=at...	[more]

BLAST of CmoCh00G001070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0S2IG79	7.7e-93	95.85	ATP synthase subunit alpha OS=Cucurbita moschata OX=3662 GN=atpA PE=3 SV=1	[more]
A0A0S2IE22	7.7e-93	95.85	ATP synthase subunit alpha OS=Cucurbita argyrosperma OX=34294 GN=atpA PE=3 SV=1	[more]
A0A2H4T1V9	7.7e-93	95.85	ATP synthase subunit alpha, chloroplastic OS=Cucurbita maxima OX=3661 GN=atpA PE...	[more]
A0A0S2IHI4	7.7e-93	95.85	ATP synthase subunit alpha OS=Cucurbita pepo var. texana OX=37651 GN=atpA PE=3 S...	[more]
A0A0S2IH79	7.7e-93	95.85	ATP synthase subunit alpha OS=Cucurbita pepo subsp. fraterna OX=37649 GN=atpA PE...	[more]

BLAST of CmoCh00G001070 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00120.1	3.2e-91	90.16	ATP synthase subunit alpha	[more]
AT2G07698.1	9.1e-54	53.85	ATPase, F1 complex, alpha subunit protein	[more]
ATMG01190.1	5.9e-53	53.33	ATP synthase subunit 1	[more]
AT5G08670.1	1.2e-10	25.67	ATP synthase alpha/beta family protein	[more]
AT5G08680.1	1.2e-10	25.67	ATP synthase alpha/beta family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.12240		coord: 3..195 e-value: 3.3E-72 score: 245.5
None	No IPR available	PANTHER	PTHR48082	ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL	coord: 1..194
None	No IPR available	PANTHER	PTHR48082:SF6	ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC	coord: 1..194
IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	PFAM	PF00006	ATP-synt_ab	coord: 74..193 e-value: 7.3E-31 score: 107.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 21..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh00G001070.1	CmoCh00G001070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism