CmoCh00G000750 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh00G000750
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Location	Cmo_Chr00: 15924731 .. 15925088 (+)
RNA-Seq Expression	CmoCh00G000750
Synteny	CmoCh00G000750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGATAAAAAGGATTTTGGTTATAGTTTTCCTTGGTCCGGGACGAGGTGGTACTTGTTATATTTCGGCTTGGGACGCCTTTGGCCGTTTTCTGGATGTGAAATAACATTGGTTACTTTAGATTGGCACTGGAAGCACATCACATTATGGCAGGGTAACGTTTCACTGTTTCATTCATCTTCCACTTATTTGCTGGGATGGTTAAGAGATTCTCTATGGTTAAACTCTTCACAACTTCTCAATGGTATGAATAGTTTATCAGTCTAGGGACGCGGATGTTCTTATTTGGACATCTTGTTTGGGCTACTGGATTTATGTTCTGAATTTCCTGTCGGGGGGATGGATACTGGCATGA

mRNA sequence

ATGCTGGATAAAAAGGATTTTGGTTATAGTTTTCCTTGGTCCGGGACGAGGTGGTACTTGTTATATTTCGGCTTGGGACGCCTTTGGCCGTTTTCTGGATGTGAAATAACATTGGTTACTTTAGATTGGCACTGGAAGCACATCACATTATGGCAGGGTAACGTTTCACTGTTTCATTCATCTTCCACTTATTTGCTGGGATGGTTAAGAGATTCTCTATGGTTAAACTCTTCACAACTTCTCAATGTTTATCAGTCTAGGGACGCGGATGTTCTTATTTGGACATCTTGTTTGGGCTACTGGATTTATGTTCTGAATTTCCTGTCGGGGGGATGGATACTGGCATGA

Coding sequence (CDS)

ATGCTGGATAAAAAGGATTTTGGTTATAGTTTTCCTTGGTCCGGGACGAGGTGGTACTTGTTATATTTCGGCTTGGGACGCCTTTGGCCGTTTTCTGGATGTGAAATAACATTGGTTACTTTAGATTGGCACTGGAAGCACATCACATTATGGCAGGGTAACGTTTCACTGTTTCATTCATCTTCCACTTATTTGCTGGGATGGTTAAGAGATTCTCTATGGTTAAACTCTTCACAACTTCTCAATGTTTATCAGTCTAGGGACGCGGATGTTCTTATTTGGACATCTTGTTTGGGCTACTGGATTTATGTTCTGAATTTCCTGTCGGGGGGATGGATACTGGCATGA

Protein sequence

MLDKKDFGYSFPWSGTRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLWQGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQSRDADVLIWTSCLGYWIYVLNFLSGGWILA

Homology

[Close]

BLAST of CmoCh00G000750 vs. ExPASy Swiss-Prot
Match: A0A334 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Coffea arabica OX=13443 GN=psaB PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.8e-22
Identity = 58/120 (48.33%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 1   MLDKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW 60
           M DKKDFGYSFP  G         + W   Y  L   W  +   I  VT  WHWKHITLW
Sbjct: 547 MPDKKDFGYSFPCDGPGRGGTCDISAWDAFY--LAVFWMLN--TIGWVTFYWHWKHITLW 606

Query: 61  QGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQ---SRDADVLIWTSCLGYWIYVLNFL 109
           QGNVS F+ SSTYL+GWLRD LWLNSSQL+N Y         V  W    G+ ++ + F+
Sbjct: 607 QGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWAIGFM 662

[Close]

BLAST of CmoCh00G000750 vs. ExPASy Swiss-Prot
Match: Q7YJX3 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Calycanthus floridus var. glaucus OX=212734 GN=psaB PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-22
Identity = 58/120 (48.33%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 1   MLDKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW 60
           M DKKDFGYSFP  G         + W   Y  L   W  +   I  VT  WHWKHITLW
Sbjct: 547 MPDKKDFGYSFPCDGPGRGGTCDISAWDAFY--LAVFWMLN--TIGWVTFYWHWKHITLW 606

Query: 61  QGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQ---SRDADVLIWTSCLGYWIYVLNFL 109
           QGNVS F+ SSTYL+GWLRD LWLNSSQL+N Y    +    V  W    G+ ++   F+
Sbjct: 607 QGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGTNSLSVWAWMFLFGHLVWATGFM 662

[Close]

BLAST of CmoCh00G000750 vs. ExPASy Swiss-Prot
Match: A6MMC1 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Chloranthus spicatus OX=13006 GN=psaB PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-22
Identity = 58/120 (48.33%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 1   MLDKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW 60
           M DKKDFGYSFP  G         + W   Y  L   W  +   I  VT  WHWKHITLW
Sbjct: 547 MPDKKDFGYSFPCDGPGRGGTCDISAWDAFY--LAVFWMLN--TIGWVTFYWHWKHITLW 606

Query: 61  QGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQ---SRDADVLIWTSCLGYWIYVLNFL 109
           QGNVS F+ SSTYL+GWLRD LWLNSSQL+N Y    +    V  W    G+ ++   F+
Sbjct: 607 QGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGTNSLSVWAWMFLFGHLVWATGFM 662

[Close]

BLAST of CmoCh00G000750 vs. ExPASy Swiss-Prot
Match: A6MMU3 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Illicium oligandrum OX=145286 GN=psaB PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-22
Identity = 58/120 (48.33%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 1   MLDKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW 60
           M DKKDFGYSFP  G         + W   Y  L   W  +   I  VT  WHWKHITLW
Sbjct: 547 MPDKKDFGYSFPCDGPGRGGTCDISAWDAFY--LAVFWMLN--TIGWVTFYWHWKHITLW 606

Query: 61  QGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQ---SRDADVLIWTSCLGYWIYVLNFL 109
           QGNVS F+ SSTYL+GWLRD LWLNSSQL+N Y    +    V  W    G+ ++   F+
Sbjct: 607 QGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGTNSLSVWAWMFLFGHLVWATGFM 662

[Close]

BLAST of CmoCh00G000750 vs. ExPASy Swiss-Prot
Match: Q0G9M0 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Liriodendron tulipifera OX=3415 GN=psaB PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-22
Identity = 58/120 (48.33%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 1   MLDKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW 60
           M DKKDFGYSFP  G         + W   Y  L   W  +   I  VT  WHWKHITLW
Sbjct: 547 MPDKKDFGYSFPCDGPGRGGTCDISAWDAFY--LAVFWMLN--TIGWVTFYWHWKHITLW 606

Query: 61  QGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQ---SRDADVLIWTSCLGYWIYVLNFL 109
           QGNVS F+ SSTYL+GWLRD LWLNSSQL+N Y    +    V  W    G+ ++   F+
Sbjct: 607 QGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGTNSLSVWAWMFLFGHLVWATGFM 662

[Close]

BLAST of CmoCh00G000750 vs. ExPASy TrEMBL
Match: A0A6M8TQU6 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Allium neriniflorum OX=105307 GN=psaB PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.9e-22
Identity = 66/128 (51.56%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 1   MLDKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW 60
           M DKKDFGYSFP  G         + W   Y  L   W  +   I  VT  WHWKHITLW
Sbjct: 547 MPDKKDFGYSFPCDGPGRGGTCDISAWDAFY--LAVFWMLN--TIGWVTFYWHWKHITLW 606

Query: 61  QGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQSRDADVL-IWT-----SCLGYWIYVL 114
           QGNVS F+ SSTYL+GWLRD LWLNSSQL+N Y     + L +W        LGYWIYVL
Sbjct: 607 QGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLGYWIYVL 666

[Close]

BLAST of CmoCh00G000750 vs. ExPASy TrEMBL
Match: A0A6M8AZG9 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Garcinia pedunculata OX=1220708 GN=psaB PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.3e-20
Identity = 59/120 (49.17%), Postives = 69/120 (57.50%), Query Frame = 0


Query: 1   MLDKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW 60
           M DKKDFGYSFP  G         + W   Y  L   W  +   I  VT  WHWKHITLW
Sbjct: 547 MPDKKDFGYSFPCDGPGRGGTCDISAWDAFY--LAVFWMLN--TIGWVTFYWHWKHITLW 606

Query: 61  QGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQ---SRDADVLIWTSCLGYWIYVLNFL 109
           QGNVS F+ SSTYL+GWLRD LWLNSSQL+N Y         V  W   LG+ ++ + F+
Sbjct: 607 QGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLLGHLVWAIGFM 662

[Close]

BLAST of CmoCh00G000750 vs. ExPASy TrEMBL
Match: A0A446PLS8 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_3Bv1G076350 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.3e-20
Identity = 59/120 (49.17%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 1   MLDKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW 60
           MLDKKDFGYSFP  G         + W   Y  L   W  +   I  VT  WHWKHITLW
Sbjct: 547 MLDKKDFGYSFPCDGPGRGGTYDISAWDAFY--LAVFWMLN--TIGWVTFYWHWKHITLW 606

Query: 61  QGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQ---SRDADVLIWTSCLGYWIYVLNFL 109
           QGNVS F+ SSTYL+GWLRD LWLNSSQL+N Y         V  W    G+ ++   F+
Sbjct: 607 QGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFM 662

[Close]

BLAST of CmoCh00G000750 vs. ExPASy TrEMBL
Match: A0A446PLT2 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_3Bv1G076350 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.3e-20
Identity = 59/120 (49.17%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 1    MLDKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW 60
            MLDKKDFGYSFP  G         + W   Y  L   W  +   I  VT  WHWKHITLW
Sbjct: 1251 MLDKKDFGYSFPCDGPGRGGTYDISAWDAFY--LAVFWMLN--TIGWVTFYWHWKHITLW 1310

Query: 61   QGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQ---SRDADVLIWTSCLGYWIYVLNFL 109
            QGNVS F+ SSTYL+GWLRD LWLNSSQL+N Y         V  W    G+ ++   F+
Sbjct: 1311 QGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFM 1366

[Close]

BLAST of CmoCh00G000750 vs. ExPASy TrEMBL
Match: A0A346QPB1 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Sarcandra glabra OX=92927 GN=psaB PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.9e-20
Identity = 58/120 (48.33%), Postives = 69/120 (57.50%), Query Frame = 0


Query: 1   MLDKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW 60
           M DKKDFGYSFP  G         + W   Y  L   W  +   I  VT  WHWKHITLW
Sbjct: 547 MPDKKDFGYSFPCDGPGRGGTCDISAWDAFY--LAVFWMLN--TIGWVTFYWHWKHITLW 606

Query: 61  QGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQ---SRDADVLIWTSCLGYWIYVLNFL 109
           QGNVS F+ SSTYL+GWLRD LWLNSSQL+N Y    +    V  W    G+ ++ + F+
Sbjct: 607 QGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGTNSLSVWAWMFLFGHLVWAIGFM 662

[Close]

BLAST of CmoCh00G000750 vs. NCBI nr
Match: YP_009869277.1 (photosystem I P700 apoprotein A2 [Allium neriniflorum] >QKJ80866.1 photosystem I P700 apoprotein A2 [Allium neriniflorum])

HSP 1 Score: 115.2 bits (287), Expect = 3.9e-22
Identity = 66/128 (51.56%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 1   MLDKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW 60
           M DKKDFGYSFP  G         + W   Y  L   W  +   I  VT  WHWKHITLW
Sbjct: 547 MPDKKDFGYSFPCDGPGRGGTCDISAWDAFY--LAVFWMLN--TIGWVTFYWHWKHITLW 606

Query: 61  QGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQSRDADVL-IWT-----SCLGYWIYVL 114
           QGNVS F+ SSTYL+GWLRD LWLNSSQL+N Y     + L +W        LGYWIYVL
Sbjct: 607 QGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLGYWIYVL 666

[Close]

BLAST of CmoCh00G000750 vs. NCBI nr
Match: KAF9606950.1 (hypothetical protein IFM89_030248 [Coptis chinensis])

HSP 1 Score: 108.2 bits (269), Expect = 4.7e-20
Identity = 59/120 (49.17%), Postives = 69/120 (57.50%), Query Frame = 0


Query: 1   MLDKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW 60
           M DKKDFGYSFP  G         + W + Y  L   W  +   I  VTL WHWKHITLW
Sbjct: 556 MADKKDFGYSFPCDGPGRGGTCDISAWDVFY--LAVFWMLN--TIGWVTLYWHWKHITLW 615

Query: 61  QGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQ---SRDADVLIWTSCLGYWIYVLNFL 109
           QGNVS F+ SSTYL+GWLRD LWLNSSQL+N Y         V  W    G+ ++   F+
Sbjct: 616 QGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLPVWAWMFLFGHLVWATGFM 671

[Close]

BLAST of CmoCh00G000750 vs. NCBI nr
Match: VAH75295.1 (unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 108.2 bits (269), Expect = 4.7e-20
Identity = 59/120 (49.17%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 1   MLDKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW 60
           MLDKKDFGYSFP  G         + W   Y  L   W  +   I  VT  WHWKHITLW
Sbjct: 547 MLDKKDFGYSFPCDGPGRGGTYDISAWDAFY--LAVFWMLN--TIGWVTFYWHWKHITLW 606

Query: 61  QGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQ---SRDADVLIWTSCLGYWIYVLNFL 109
           QGNVS F+ SSTYL+GWLRD LWLNSSQL+N Y         V  W    G+ ++   F+
Sbjct: 607 QGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFM 662

[Close]

BLAST of CmoCh00G000750 vs. NCBI nr
Match: VAH75293.1 (unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 108.2 bits (269), Expect = 4.7e-20
Identity = 59/120 (49.17%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 1    MLDKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW 60
            MLDKKDFGYSFP  G         + W   Y  L   W  +   I  VT  WHWKHITLW
Sbjct: 1251 MLDKKDFGYSFPCDGPGRGGTYDISAWDAFY--LAVFWMLN--TIGWVTFYWHWKHITLW 1310

Query: 61   QGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQ---SRDADVLIWTSCLGYWIYVLNFL 109
            QGNVS F+ SSTYL+GWLRD LWLNSSQL+N Y         V  W    G+ ++   F+
Sbjct: 1311 QGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFM 1366

[Close]

BLAST of CmoCh00G000750 vs. NCBI nr
Match: YP_009861891.1 (photosystem I P700 apoprotein A2 [Garcinia pedunculata] >QKD75908.1 photosystem I P700 apoprotein A2 [Garcinia pedunculata])

HSP 1 Score: 108.2 bits (269), Expect = 4.7e-20
Identity = 59/120 (49.17%), Postives = 69/120 (57.50%), Query Frame = 0


Query: 1   MLDKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW 60
           M DKKDFGYSFP  G         + W   Y  L   W  +   I  VT  WHWKHITLW
Sbjct: 547 MPDKKDFGYSFPCDGPGRGGTCDISAWDAFY--LAVFWMLN--TIGWVTFYWHWKHITLW 606

Query: 61  QGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQ---SRDADVLIWTSCLGYWIYVLNFL 109
           QGNVS F+ SSTYL+GWLRD LWLNSSQL+N Y         V  W   LG+ ++ + F+
Sbjct: 607 QGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLLGHLVWAIGFM 662

[Close]

BLAST of CmoCh00G000750 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 105.5 bits (262), Expect = 2.8e-23
Identity = 58/120 (48.33%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 1   MLDKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW 60
           M DKKDFGYSFP  G         + W   Y  L   W  +   I  VT  WHWKHITLW
Sbjct: 547 MPDKKDFGYSFPCDGPGRGGTCDISAWDAFY--LAVFWMLN--TIGWVTFYWHWKHITLW 606

Query: 61  QGNVSLFHSSSTYLLGWLRDSLWLNSSQLLNVYQ---SRDADVLIWTSCLGYWIYVLNFL 109
           QGNVS F+ SSTYL+GWLRD LWLNSSQL+N Y         V  W    G+ ++   F+
Sbjct: 607 QGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFM 662

[Close]

BLAST of CmoCh00G000750 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 43.5 bits (101), Expect = 1.3e-04
Identity = 36/129 (27.91%), Postives = 54/129 (41.86%), Query Frame = 0


Query: 3   DKKDFGYSFPWSG---------TRWYLLYFGLGRLWPFSGCEITLVTLDWHWKHITLW-- 62
           DK + G+ FP  G         + W  ++ GL   W ++   + +    W  +   +W  
Sbjct: 563 DKANLGFRFPCDGPGRGGTCQVSAWDHVFLGL--FWMYNAISVVIFHFSWKMQS-DVWGS 622

Query: 63  ---QGNVS-----LFHSSSTYLLGWLRDSLWLNSSQLLNVY-QSRDADVLIWTSCLGYWI 112
              QG V+      F  SS  + GWLRD LW  +SQ++  Y  S  A  L +      W 
Sbjct: 623 ISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWA 682

The following BLAST results are available for this feature:

BLAST of CmoCh00G000750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A334	1.8e-22	48.33	Photosystem I P700 chlorophyll a apoprotein A2 OS=Coffea arabica OX=13443 GN=psa...	[more]
Q7YJX3	2.3e-22	48.33	Photosystem I P700 chlorophyll a apoprotein A2 OS=Calycanthus floridus var. glau...	[more]
A6MMC1	2.3e-22	48.33	Photosystem I P700 chlorophyll a apoprotein A2 OS=Chloranthus spicatus OX=13006 ...	[more]
A6MMU3	2.3e-22	48.33	Photosystem I P700 chlorophyll a apoprotein A2 OS=Illicium oligandrum OX=145286 ...	[more]
Q0G9M0	2.3e-22	48.33	Photosystem I P700 chlorophyll a apoprotein A2 OS=Liriodendron tulipifera OX=341...	[more]

BLAST of CmoCh00G000750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6M8TQU6	1.9e-22	51.56	Photosystem I P700 chlorophyll a apoprotein A2 OS=Allium neriniflorum OX=105307 ...	[more]
A0A6M8AZG9	2.3e-20	49.17	Photosystem I P700 chlorophyll a apoprotein A2 OS=Garcinia pedunculata OX=122070...	[more]
A0A446PLS8	2.3e-20	49.17	Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_3Bv1G...	[more]
A0A446PLT2	2.3e-20	49.17	Photosystem I P700 chlorophyll a apoprotein A1 OS=Triticum turgidum subsp. durum...	[more]
A0A346QPB1	3.9e-20	48.33	Photosystem I P700 chlorophyll a apoprotein A2 OS=Sarcandra glabra OX=92927 GN=p...	[more]

BLAST of CmoCh00G000750 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009869277.1	3.9e-22	51.56	photosystem I P700 apoprotein A2 [Allium neriniflorum] >QKJ80866.1 photosystem I...	[more]
KAF9606950.1	4.7e-20	49.17	hypothetical protein IFM89_030248 [Coptis chinensis]	[more]
VAH75295.1	4.7e-20	49.17	unnamed protein product [Triticum turgidum subsp. durum]	[more]
VAH75293.1	4.7e-20	49.17	unnamed protein product [Triticum turgidum subsp. durum]	[more]
YP_009861891.1	4.7e-20	49.17	photosystem I P700 apoprotein A2 [Garcinia pedunculata] >QKD75908.1 photosystem ...	[more]

BLAST of CmoCh00G000750 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00340.1	2.8e-23	48.33	Photosystem I, PsaA/PsaB protein	[more]
ATCG00350.1	1.3e-04	27.91	Photosystem I, PsaA/PsaB protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036408	Photosystem I PsaA/PsaB superfamily	GENE3D	1.20.1130.10	Photosystem I PsaA/PsaB	coord: 1..110 e-value: 2.1E-15 score: 57.8
IPR036408	Photosystem I PsaA/PsaB superfamily	SUPERFAMILY	81558	Photosystem I subunits PsaA/PsaB	coord: 3..101
IPR001280	Photosystem I PsaA/PsaB	PFAM	PF00223	PsaA_PsaB	coord: 1..107 e-value: 1.5E-12 score: 46.6
None	No IPR available	PANTHER	PTHR33078:SF57	PHOTOSYSTEM II REACTION CENTER PROTEIN H	coord: 35..96
None	No IPR available	PANTHER	PTHR33078	PROTEIN YCF2-RELATED	coord: 35..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh00G000750.1	CmoCh00G000750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0043229	intracellular organelle
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0005488	binding