Cmc12g0336961 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0336961
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr12: 25263789 .. 25266757 (-)
RNA-Seq ExpressionCmc12g0336961
SyntenyCmc12g0336961
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATAAAAAGCTATGATATGATACAAAACGATACTATTCGTGGGTGCAACCATAGCGTTTGTTTTCATTTGTTTATAAAAAAATTATCCCATTCGGCCATCAGCAGAGAGGAAGATCATCCGGAGGAGGAAGCAGAGATTTAGAATTCCCTTCTCCATTTCGTACTATGAGACCCATTGCAAGTCCCCATGAAGTATGTTCTTCAAGATGACAATGTATAAACCAAACTCCAGGATTATCCGCCTTAATTCTGATCGCTGCCCACCCTCCCCTCGGCACCGCCACCGTGTTTCTTTCCGGTGGATCAACCAGATTGTACTTCGCCGGATCCCTACCCGCGTTGAAATTCCCAAATCCCCTGCCTACAACGAAGAAATTGTGCCCATGAACATGGATCGGATGATTCTCCACACTAAGAAAATTCGTGCCCTGAAACACGATTTCCAGATTTGTTCCATATGGAACCGCCAAAAGCTTTGTCCCAAATTCTGTGTTCATGTTTTTGGTTAATGGGTTTACGCCAGTATAATCAAAAACCGTGCTGGGTTTTTCTGGAAAATCAGTGGAGTACGAATTGGTAGCGATTTTTCTATAATGGGATTCCAATATGGACGAATCCGGTCGAACGAAGGATTGATTGTTCATAGAAGCGAAAAATCTCTTTCCGTTCAAACCCTTGCAGGTTTTCCTAGATGGGCAGTTCTGGAGATTGAGGCTTATGGTAACGAACACTCTTTTGTGAACTGTTTTAGGAACATTACAAGGGTACAGGGGAGAATTAAGGCTACGGAGTTTGTTGGAAAATGCAGTGGCAAAGGCTGTATCCTTCATATCGGGGAGGTTTTCAGGTATTTGATTAGATGGGAATTTTGTTTTTCGTTTAAGTTTATTCATTTTCCTGCTCTTGTATCTTAAGAAGCCAATGGAGGTGGAGTTGTTGAAGGGGAAACTTGAAGTTACATAGGGTGTGATTGCCATTGGGAAGAGGATTCCAGAGGAGTGGTCTGGAATTTGAATTTGATCTGTATTGAGTAGAAGAGTGGTGGTTTGGCCGGGAGCTATCATAATGGCTGTGGTATTGAAGGGTTTTGTGTATGCAGCATCAATCTCCACCACTGTCAATGTATGGTTGGCTATGGCAAAGAAAAGTTCATCGTTGAGTGCTCCATTAATTACTCTCAGCAGGTAAGTTTTCCCCCTTTCTACTGTTGAAATGAATGTATCTGGCATTGAACATTGTGGTGATTGAAAATTATATTTCCTGTGTGTTTGATTTTGATATAACAAAATGAAAGTTTAGAAAGTGGAGTGTGTAGTACTTACCTCTGCTAGAGCAAGGATAAAGAGGTCCCGGCAAGCCATTAATGGTATAGGCATCAGAATTGTTAGGTCCACCTCCAGATTTTAGCATCTCATTTTCAACTTCTTCCACATCCCCATTCCACCATTCACCTGCATGTGGGGTCATGTTAAAATAACTGTTCATCACAAATCATAAATTTGCATGTGAAAAGTTACATCTTTTGATTATATCATAAAGAATGAAAGTTATTTAAAAATTTTCAAAATCACTTTTGATTATATCCAACCAATACACAATCAAAATTCGAAAGTGTTCTTATACATTAAAAGTGACATTTTACCCTTTCAAAAGTCATCATAAACTCACTTGGGATGAACTAGGGACTTACCAAAAATAAGAGGAATCCCAGCTTCAATTGGAAAAGTGGAGAATGGGTAAGGCATGCGAGGGTAAATGATGAAGGCACCATGCACAGAAGCACGTTGCCATGAGTAATGTGCGTGCCACCACAGTGTCCCTCTTTGGTCAATCACTGAGAATTTGTATGTGTATGATTCTCCTGATCTTATAGGACACTGTGTTATGTAAGCCGGACCATCTGCCCATCCTGTTCTTAATTGCTTGACCCCATGCCTGCAGATCATCAAATTTGTTAGAGATCTTATGGGGTTACGTTTTGTTTTACTTACTATTTTCAAAAAAATGCTCGTAGATTATATTTTACTAGCTATAACATGTTAGAAACTTACCAATGAATAGTTGTGTTTTCATTTATGCAATTATTGACCTTGATTTCGACTGTATCACCTTCATGAACTGCAATGGTTGGCCCTGGATACTGTCCATTCACAGTTAGAAGTTGCTTTGTATGGCACAATCTTGTCACCTTCTTCCACTCCACCTTTATTGGAAAAAAAACGATACTTTTCAGTTATAAATGACAATAATCACACAGAAACATCCATATATGTTAAGAATAAAATATATAGCTGAAAATATGCAACCAAATAGGTTTTCCAGGCTCGTATTATTTCATTTTTTTTTCTTGTTGCTTTTATCAAAAAAAGAAAAAAGAAACTTTCTTGTTTAAGCTTACATTAAACTGAAATCGTCGAATGACAGGAGAAGCAAAGCTGAATGGCACAAAACCAGCAAGGAGGATGCTTATGAATATGACAAGCAACATCATCCGACACTGCTGGCTGAGGCTCTTCATTGTCATAAAAAATTTTAACTCTTCAAAACAAGTTAGCTAACAATTTATATATATTCTACAAGAAGTAGTTGCACTCTTTTTATAGTTTTTTGCTCTCTTCGAACTCACATTCTGCAGTCATTGGCACAGTCTGTGAATCCTTTTGATATTGTGGTGAGTGGTGCTTTGTTGTGGGGGTTGGTGCGTAAGTGGGGTTAATTGCTGATATCAGTATGTGGTTAATGTCAATTGGTCGTTTTTTAAACTAACGCTAAGCAGATTAGGTGTTTGGCTGCTGTATATACACACATTATACAACCACTGATGAAATATTATTGATTCCCTTTTGTCATTTCAAGCAGAGAATTCGATTGTTGGTGTGAAAGAATCAAGGCCCAAAATTGTAGTGGGTTGGTTTGAGTTTATCTTCTTTCTTGAAGTATTGATGTTAGGGTTATCTAAGAAATAATG

mRNA sequence

TGATAAAAAGCTATGATATGATACAAAACGATACTATTCGTGGGTGCAACCATAGCGTTTGTTTTCATTTGTTTATAAAAAAATTATCCCATTCGGCCATCAGCAGAGAGGAAGATCATCCGGAGGAGGAAGCAGAGATTTAGAATTCCCTTCTCCATTTCGTACTATGAGACCCATTGCAAGTCCCCATGAAGTATGTTCTTCAAGATGACAATGTATAAACCAAACTCCAGGATTATCCGCCTTAATTCTGATCGCTGCCCACCCTCCCCTCGGCACCGCCACCGTGTTTCTTTCCGGTGGATCAACCAGATTGTACTTCGCCGGATCCCTACCCGCGTTGAAATTCCCAAATCCCCTGCCTACAACGAAGAAATTGTGCCCATGAACATGGATCGGATGATTCTCCACACTAAGAAAATTCGTGCCCTGAAACACGATTTCCAGATTTGTTCCATATGGAACCGCCAAAAGCTTTGTCCCAAATTCTGTGTTCATGTTTTTGGTTAATGGGTTTACGCCAGTATAATCAAAAACCGTGCTGGGTTTTTCTGGAAAATCAGTGGAGTACGAATTGGTAGCGATTTTTCTATAATGGGATTCCAATATGGACGAATCCGGTCGAACGAAGGATTGATTGTTCATAGAAGCGAAAAATCTCTTTCCGTTCAAACCCTTGCAGGTTTTCCTAGATGGGCAGTTCTGGAGATTGAGGCTTATGGTAACGAACACTCTTTTGTGAACTGTTTTAGGAACATTACAAGGGTACAGGGGAGAATTAAGGCTACGGAGTTTGTTGGAAAATGCAGTGGCAAAGGCTGTATCCTTCATATCGGGGAGGTTTTCAGGTATTTGATTAGATGGGAATTTTGTTTTTCGTTTAAGTTTATTCATTTTCCTGCTCTTGTATCTTAAGAAGCCAATGGAGGTGGAGTTGTTGAAGGGGAAACTTGAAGTTACATAGGGTGTGATTGCCATTGGGAAGAGGATTCCAGAGGAGTGGTCTGGAATTTGAATTTGATCTGTATTGAGTAGAAGAGTGGTGGTTTGGCCGGGAGCTATCATAATGGCTGTGGTATTGAAGGGTTTTGTGTATGCAGCATCAATCTCCACCACTGTCAATGTATGGTTGGCTATGGCAAAGAAAAGTTCATCGTTGAGTGCTCCATTAATTACTCTCAGCAGGAGAAGCAAAGCTGAATGGCACAAAACCAGCAAGGAGGATGCTTATGAATATGACAAGCAACATCATCCGACACTGCTGGCTGAGGCTCTTCATTGTCATAAAAAATTTTAACTCTTCAAAACAAGTTAGCTAACAATTTATATATATTCTACAAGAAGTAGTTGCACTCTTTTTATAGTTTTTTGCTCTCTTCGAACTCACATTCTGCAGTCATTGGCACAGTCTGTGAATCCTTTTGATATTGTGGTGAGTGGTGCTTTGTTGTGGGGGTTGGTGCGTAAGTGGGGTTAATTGCTGATATCAGTATGTGGTTAATGTCAATTGGTCGTTTTTTAAACTAACGCTAAGCAGATTAGGTGTTTGGCTGCTGTATATACACACATTATACAACCACTGATGAAATATTATTGATTCCCTTTTGTCATTTCAAGCAGAGAATTCGATTGTTGGTGTGAAAGAATCAAGGCCCAAAATTGTAGTGGGTTGGTTTGAGTTTATCTTCTTTCTTGAAGTATTGATGTTAGGGTTATCTAAGAAATAATG

Coding sequence (CDS)

ATGGCTGTGGTATTGAAGGGTTTTGTGTATGCAGCATCAATCTCCACCACTGTCAATGTATGGTTGGCTATGGCAAAGAAAAGTTCATCGTTGAGTGCTCCATTAATTACTCTCAGCAGGAGAAGCAAAGCTGAATGGCACAAAACCAGCAAGGAGGATGCTTATGAATATGACAAGCAACATCATCCGACACTGCTGGCTGAGGCTCTTCATTGTCATAAAAAATTTTAA

Protein sequence

MAVVLKGFVYAASISTTVNVWLAMAKKSSSLSAPLITLSRRSKAEWHKTSKEDAYEYDKQHHPTLLAEALHCHKKF
Homology
BLAST of Cmc12g0336961 vs. ExPASy TrEMBL
Match: A0A0A0LT31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042715 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.2e-31
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 1   MAVVLKGFVYAASISTTVNVWLAMAKKSSSLSAPLITLSRRSKAEWHKTSKEDAYEYDKQ 60
           MAVVLKGFVYAASISTTVNVWLAMAKKSSSLSAPLITLSRRSKAEWHKTSKEDAYEYDKQ
Sbjct: 96  MAVVLKGFVYAASISTTVNVWLAMAKKSSSLSAPLITLSRRSKAEWHKTSKEDAYEYDKQ 155

Query: 61  HHPTLLAEALHCHKK 76
           HHPTLLAEALH HKK
Sbjct: 156 HHPTLLAEALHYHKK 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LT317.2e-3198.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042715 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0336961.1Cmc12g0336961.1mRNA