Cmc12g0336411 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0336411
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	DNA-binding protein RHL1 isoform X2
Location	CMiso1.1chr12: 24959007 .. 24966930 (-)
RNA-Seq Expression	Cmc12g0336411
Synteny	Cmc12g0336411

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAGGAATGAAAGAGGAAACAAGAGGCAGGGATCCCGGAGACTAAACTGCAGTTGGTAGCTCACTACAAGCAACAGAAATGGCGCGAGGATCATCGTCTTCAAAGAAGGACGAAGCAAAAGGAGAAATCAACCCAGAGATTGGGGAGCGAAAGCGGCTCAAGAAGCTCGCATTCTCCAATAACATACTTTCAGAAACCCAATCAAAGCCCCAGGCTTATCTGAGCCCTTCAGCGACGGTTCTGAAGCACCATGGCAAAGACATTGTCAAGAAATCACAGCGAAAAAACAGGTTCCTCTTCTCCTTTTCAGGCTTGCTTGCTCCCGTTAGTGGTGGCAAGATTGGCGAGCTCAAGGATTTAGCAACCAAGAATCCCGTTCTCTATCTCGATTTTCCTCAGGTTCGTCTGTTCTTCCTTTCTCTCAACGCCTTTCTGTTTTTCTCTCCTTTGAACTTCTTCAGTTTTGTATCCGGGTTCGTCTCTTCTCCTCTAGAATGAATTTTGTCGCCTGTGCATTAAGCAATTGTTTGTCATCTTCAACCAGTCTTAAATATTTGATAGATAAGCTCATATCACACTTCAGGTGTTTTCTATGTTTCTTATATACATACTTCTTGCCTTCTGGATTCTACAAGATAGACCGAGGATAGTAGTTATTTTTTTTTTTGGTGGGTAATACAACTTGGAAGGATAGATCTCAAAAAAGACTAGGACAGTATTGGATGAGAAAACTAGAGCTGGGTCGATGAGATAACAGCAACCCAATGGCTGTTCTTTTAAGGGTAAACCAATATATTTGTTGGGGTGTGCTTCCCGGGCTTTTTAGTGGGAGATTTCGCTGGAAAAGAACTGTAGAAACTTCGTAGAGGAATCTGCAAATTTTGTTTCCACTTGGTGGTGCCTTAGCAACACCATTCTTTGTAATTGTTTAGGGTTTAGGGTTTTTGAGTTATTTTTGATTAGTCAACTGTGCAAAATTTGGACTCTGTGAATTTTGTTTTTTAATAGACAAGGTATTATCAATATTTGAGTTTTTTGGTTGATTTCGAGTCCATGGAGTTGCTATCAACATCATAAATCATTGTATCATCATTCCATAGTTATTAGAAGTTCATGAAATTGATGTACTATCTAATTAATAATTATTGTTTCTACTAAACTCATATTTCCAATGATATTTTTTCTCATTAAATGAGATACTTTTCTTAGTATTTGAGTGCATAGCATTAAAGTGAGTTAAATATGTGGCGATTGTTATTGTTATTGCCTTATTATTTGTTTATACCTGGAAAATGGATGCGGAAGCATATTTTTGGTATGCGCAAGCTAACCTGGAAACCCACAAATTATTTTTTCTCCCCGAATGCCAATATTGATTTTATGTGGTCATGAAGCATCTAGTGGTGGAATTGTTCTGATTGCTATTTTGTTTGCTTTCCAGGGGCGTATGAAGTTGTTTGGAACTATCATGTATCCGAAGAACAGATATTTAACTTTGCAGTTTTCTAAAGGTGGAAAGAATGTGACTTGTGAAGATTGTTTCGATAATATGGTTAGTCCTTTTGCTTTTTTGTTTCATTCCTTCTTTTTTGGGGACTTTATTTTTGTTCATTTTCATTTAGTGTTTCATAAACCCGTTGCACAATAAATGATACTTGTAGCTGGTTTCAATTCTTAGTATGATCTGAATGCTTCTTTATGTACTGCTTCCGAAATTCATCTTTGCCGGTTGATTCATTTTTTGTGATTTTTCTTTCAAAGATAAAGCAAAAATTCTATGGTGCAATACAAATTGAGGTTTCCTAGGCCTATTGTCGGAGACCCATATTTGGTCCGATCCAAAATGATTCTATCATTTCTGTATCTGCAATTCAATATATATGAGTATAGATAGATATATGTATTTACCCTTCTTTCTATTATTTTTTTAGTAAAAGTTTTAATACTTAAACGGTCGATTCTTTTATTCGTGTTATCTTCCACCTTTCAGAATGAAAACAGAGAAATGCTTCATTATCATCTCATTTGCATTTTGAGCAAACAAGTCAAGCATTGGCCACAGCTTGTGAACATCTAGCAAGGTCTTGTCTTAAATGATATGTTTGCCCAATAAAAGTGTGGCAAGGACAATCATCCACCAACAGGAAAAGGATAAAAAAAATCTGTTTAAGTTATCCTGATGTGTTTGTTAATTGTGGTTCATGAAGATAGATACTAGATGGTGTCATTTTCTGTTCCCTGCCAATATTTATCATCTTGAAACTTAAGAGCATTTGTTCAGATTCACTATGTCGAATGATGTTCTTAATTTAACCACTGTACTGTTCTTATCACTTCTTTCTTGTTACTTAAGAAATATGACCTCTAAGCATGTACATTATGAACCAACTATTCTTTTCTCTGACTGCAGATTGTCTTTTCTGATGCATGGTGGATTGGAACAAAAGATGAAAATCCAGAAGAGGCGTGTCTTGATTTTCCTAAAGAATTGACCTTGGTGAGTTTCTTGATAAATTTTGGCCCTTAAAATGTATATATTTTTTCTCAAGTACCCCTACATTTCTATGTATAATTTCTGCGAGCATCTCTTTTCTCAAGATCATTCATGAGGCAGAATAATGGAAATGCATCCCTCTAGTCATTGTCTAATTTATGTTGTTAGAGAGATAGAGAGAGAGAATTTGCTAACTCCTAGTCGTTGCATGTCAGGGACAATGTGGAGAATATGACTTTAATGGTGGTGCTGGTGTTACCAGTACAAGTAAGCAGAGTGTTCAAAAGAAGGGAATCAATCCTGCTACAGAAAATTCATTTAAAGGAGAACATGGAGATGATTTAGTGGGCCTTGAAGCCAGCGTGACAAACTCTGTAAAGACTATGCCAGTTAGACATTCTGAAAGATCTGCCAGAAAAGTATTCAAGTATTACCCTCTGCATATATTGTTACCATGTAGTTCATATCTTATTATCAACAAGGCAGAAAACTATAGAGTTTCTAGTCAAATAGTATTTTGCATCAATTGTCTTATTTATCAACAATCCGTACCATGATTGGAAGAAAATTATGCTGCATGATCATGATTATAGATACATATTTGACACTTGATTTATGATTTTAAAAGTTTTAACTTTAAAATCTGTTTTTCAAAGAGTCCACACGTGTTTAGCTTGTCTTGGATTTTCATAGCCATAGGTGGCCTCTGTTTCAGAGAGAGCGTTCTGTGAGTTTGTGTTGCCATTTATTAGTATAACATTACTAATTTTCCTAACAGCTTATTTGTTAAATATTTTTTCAATTTTTATTTTCTATGATCTTAGCTTAGCTAGTTGGGGAGCCTATTGTAACTTTGACTTGTAGGAGGCCATCAGTATAAATACCATCTCCAATGATGGCATTGCCCCTCTCAAGTAATAACAAATAACAATATATATATATTGTTAATAGTAACATTTTGAAATAATGAAACCAGCACCAACTTTGTCCTAGAAGTTTTTTTAGCTCAACTGCCTAAAGGCCATCCAGAATTCCAGATTTCTTTCACTTGATCAGCTTGGCCGTGGTAGTTTCTATACAGTACATTGGCTTTCATTTATAATTCTAACAACCTGTACAAACATGAAACAAACAACGGAACATTGAGTCCATCTTTTGTCATGTTGGTAGACAAATAGTCTCTCAACAAATTCAGATCAAATGTGAGTTAATTGCAGCTTCTTTATTCTCATATATTCCCATTCATGTTTAGGCTTATGTCAGTTGACTTTATTTTGGTCTGTCTAGAAAAAATAATTTTCTTATTTAATTTATTTTCTATTTTTGTTAAGTTTTGCAGAGGCTTCTTCTGAGGATGAGTCTACTGGCACGGACACTGATTTGTCTGAAGGAGAAGAAAAGAATATTGTCATACATGAGCCTTCAATTGGAGATCATGCTAGTGAAAATATCCCTTCTTTGATTTTTGAGTAGTTTGTTTTAATTCATCCTCTGCAATTTTTTATTATTGTTGATTCAGTTTTAAAATTTGTCTGCTGCTGTATGTTCGATCCCTTAATTGATTACTACAGACAGAAGATATCTCAGTTGAATCTATAGATGAAGATGCCGTGGAAATTAAACCTTCTTTTCTTGAAGGAAATCAGACATCAATTTCTAAAGAAAAGAAAAATTCTCGGGCTAAGGGAAGTGCTCAGAGTGATACTCGTGGACTTGTCCAGCCTACTCTACTTAGTTTGTTCAAGAAAGTGGAGGAGAAGGTAACATCTGAATATCTGTACTTAATATCTGAAAATAGGTTGCTGGCTTGGAATCCATTTACTGCTACATTTAGGGGTTTATTAAAACCAGTAGTTATTTTTCTTGATGCAAAAGGAAACGATCGTTTAAAAACCAATGAAAGAACAAGCAAGAGCTGTTACAACCTAGCTATCAAGGAACCAAAACAAAAATACTCCCCCTCAAACTATAGAACACTTGGCGAAGCAAAGGAAAGACGTTTACCTCACCCTTGATTGTTAACGATGGTAATGATGTTTTACGAAAGTCAGCACAAAAGGTATCGTAATTCTAGAGAAAAGTATTAAAGTGTGTTGGTTACTTAGCTTTTTCAGAGAATGTGAGACAACATGCTCTTAGAGGAGACAAAAAACATAGTAAAGAGCGCTATTAAAAAGAAAAGACCATCCAAGATTTTTGGAAACACGATTGTTTCTTTCCATCTAAATGACCCAACAAATTACTGAAACTGCAAATTCCAAAAAGCTCTCAATCTTATACTAGCTAGTAACTCCTCCAAAATTGTCTTATCCAAACAATGAACTTCAATCTTTAAGGCTCACATATATTTGAAATGAATGCTTACTGTTTTCAGAGGACACCAAGAAGTTCAAAGAGGTCTTCAGCTCCCAAAGGTTCTAATATTTTTCATTGATTTTATCACGACATCGAGAATACTACAGTAACATCAAATCTGCAAAATTGGTTGCTTACAGTTTCTACCCAAAAGATGCAGCTGTCTAGTTCAAAGCAAAAGATTGACCAGGTGATGACAAATCTTCATTTTTCAGTCACGCCTTTTCTCCTCAAAATGACTAACAGATTATCATGTACTTTCAGGATGAAGGATCAAAGAAAAGGAGGGCTGTCCGGGGACAAGGTGATGCAATCTTTCATGATCTCTCCATATACTTACTGCTTGTTGAAATCTCTAACAGCTTAGATATGACAATATTGGCTTGCTGAATTTGTCATCTCTTTTGTATGCTGGGTTCTCATGGAAATTATAACAGGATTGCTCAAGAAATCATACAACTTCTGTAGTAGATCTAATAAAATATTGACTCTCATTTTGCAAGATACACGTGCATAAGTATTTGGACTAATTTTCTGTGCTCTATATTTCTAGTCGGTTTATACAATTTTAGGTTCTGGATTACCTGGTGTAGCTTTGTAATCACGTTCAGTTGACTGTGTTTATATGGTATGTTTACATGGTTGGTTGATGCATATTGATATTAGTTTGAATATGCAGGAGGAAAAGCCCAGCGGAAGGATACAGAATATGAGGTACTAGTGCCATTTTTACAAATTGTCCTTTTAAAATATTTGCTGCTTTATTAGCTTCAGGGTTTCTTATGTGCATCATTTCAACTTGGAGTGGACATGCTTCCCAAAGTTATTATATAACTGGACAAATTGCCATTACTTCTAGCTCCAACAGCCAGAAGTACCTTAAAAAGTAATCAACTTGGGTATGTTCGGTATACCAAGTGCAAAGTGCTTACAAATGTTTTTTTTTCTTAACATTATAAGCACTTGAAAGTCATTCCAAAAATTCTTAGCTGCTCATGAAAATGTTTCATCACAAATAATACTTTTTGCTTCCTAAGTCTCAAAGTCTTACGATTCTTTTTAAAAACAATATTTTGTTATTTATTTTTTCAATGAAATCTTATGTGTTAACACATGATATTTCTAAAATGGTCTTCGTTAGTTTTTGCTTGGTGACACTAACAAAAAGCCTTAAAGAATTTTATGTTGTTAAGTATAAAAAGGCCCTTGGCATCCTTCAAAGTTGAAAGAATTTCAACCAGCCATTCTTTCTCATGTATTATTGCCTCATCATCTTACAAGTGAGACCTTTTAGAATTTAGTTTAAAAGGTTGTTTGCTTCTGTGTTTTAGGTCTCATCCAAATTTAGTTCATGACTTTCAAATGTTTTAATAAACCATAAAATTAATTCTTAGTTTCAGGCTGATATGTATTCAATTTGGTTCAATGATAATGTGAATATGTTTCCAAAATTTAGAGAGGAAAGACTAATTAAGGTTTTTTTTCCTTTTTTTTTGCCCCCTTCGGAAGTAACAATAAACTAACTGTAGGCTAATTTTAAGATTTATTGGACATTTCTGACTGGCGAGATTAAAATAAAACGAGGACCAAAATATTGCGATGAACTAGTATTATAACCTAAAATTTTATATGCTCTGAATTGCCAGTACATGTAGTTTGTTTCTATTTACTACTCCCAAATCACGATTAATTACGGGATGAAATGGTTGACAGTAGATGTCACTGTATACTTTATCTACATCTTGTAGGTTGAAGATGAGATTGAAGAGTTGTCCAGCTCTCAAGAGGTGAGTGTTCACTGCCTATTTTATAACCTACATACTTCCATGATTTTTTAGGATACTGGACTGGAAGTTAGTGGGCCCTAGGTTTGTAGTCATTTTGGAGTCTAATGGAAGTATTGACTGAACTACTCCAAAATACATATAATCGATGTCTCACTTTCCTTCTTTGACTATAAATTGTTTGGCTTAGTCCCTACCCTTTGTAAACTTCTCACCCTTGTGCCCTACACCATGGTGGTCGGAAAGTTGTCATTTACTGTAATTTTTTATTTCATGTAATATTAAAAATAAAACAGGTTCTCTGTTTTTTTAGAAACAACAGCTTTTATAAAGAAAGAACGAAAGAGTACACCAGCATATGAAAAAAGAAAGAACTCAGCCCATAAAAAAAGCACAAGGAGCTCTAACTATGCAAGATAACACTTATAAAATAGCTGCAAAAGGTCTTCGAAACCGAAGTGTACGAGAAAACATGGAAGCAAACAAAGGAACAAAGCACTATGTTCCTTTTCCACCCTTCTAAAGATCCTGCCTTTCTGCTCTGCCCATAAAACCCACAAGACCCGGCACACCCCAATTAACCTCAAAAAGTGACCTTTCTCCCTCACATGGCGAATTGAGGAGGAACTCCTCAATCATAGCACTAATGTCCCTCTAGCAAACAAAAGAACAACTAAACATAGTTCTTGATATGCCTAAATGTAGTTCTTGATCCTCATCACCAATAAGCATTTACATTGTCATAAACTTTTCAAATGCCGGTGATTAAATTAAAACGTTTGAATAATTCAGCAATTTAACTTTAAATGGGAGTCAAAAGATGAAATCAAAGTGAACTTATCATTTAGGGACCAGATGGATAGTTTAACTAAAACACGTTCGTTTTAGCTTTCATAAATATTGGTTATGATCCTCCACATTTTTGCTCACGAGTTCGTTTGTCATTTAGGACACTGATGAAGATTGGACAAGTTGAGGTTGTTACCATTCTAACATTGGTAAGCCACACCAGCAGGAGCTCGAATTGCATTGCAGGGGATTATATTCAGAATTCAGAATGCTCGAATTGCTCTACCAGGTTCTTTGATGCAGCTGGCTAATTGAAATTAAAGAAATTTAACCATAAGATGATATTGAAAAGTTTTTATCATAAAGTTAGGCAATGTAAAATTATGTTTTCGATATACTTGTGAGATCAACTGTTACACTTCCTAGAAACCAGACCAAGTTTAAGGTTAAAAATATTCACATGCAGATTGTTGTGCCTTTGGATAATATGATCCAATTTT

mRNA sequence

AAGAAGGAATGAAAGAGGAAACAAGAGGCAGGGATCCCGGAGACTAAACTGCAGTTGGTAGCTCACTACAAGCAACAGAAATGGCGCGAGGATCATCGTCTTCAAAGAAGGACGAAGCAAAAGGAGAAATCAACCCAGAGATTGGGGAGCGAAAGCGGCTCAAGAAGCTCGCATTCTCCAATAACATACTTTCAGAAACCCAATCAAAGCCCCAGGCTTATCTGAGCCCTTCAGCGACGGTTCTGAAGCACCATGGCAAAGACATTGTCAAGAAATCACAGCGAAAAAACAGGTTCCTCTTCTCCTTTTCAGGCTTGCTTGCTCCCGTTAGTGGTGGCAAGATTGGCGAGCTCAAGGATTTAGCAACCAAGAATCCCGTTCTCTATCTCGATTTTCCTCAGGGGCGTATGAAGTTGTTTGGAACTATCATGTATCCGAAGAACAGATATTTAACTTTGCAGTTTTCTAAAGGTGGAAAGAATGTGACTTGTGAAGATTGTTTCGATAATATGATTGTCTTTTCTGATGCATGGTGGATTGGAACAAAAGATGAAAATCCAGAAGAGGCGTGTCTTGATTTTCCTAAAGAATTGACCTTGGGACAATGTGGAGAATATGACTTTAATGGTGGTGCTGGTGTTACCAGTACAAGTAAGCAGAGTGTTCAAAAGAAGGGAATCAATCCTGCTACAGAAAATTCATTTAAAGGAGAACATGGAGATGATTTAGTGGGCCTTGAAGCCAGCGTGACAAACTCTGTAAAGACTATGCCAGTTAGACATTCTGAAAGATCTGCCAGAAAAGTATTCAAGCTTCTTCTGAGGATGAGTCTACTGGCACGGACACTGATTTGTCTGAAGGAGAAGAAAAGAATATTGTCATACATGAGCCTTCAATTGGAGATCATGCTAACAGAAGATATCTCAGTTGAATCTATAGATGAAGATGCCGTGGAAATTAAACCTTCTTTTCTTGAAGGAAATCAGACATCAATTTCTAAAGAAAAGAAAAATTCTCGGGCTAAGGGAAGTGCTCAGAGTGATACTCGTGGACTTGTCCAGCCTACTCTACTTAGTTTGTTCAAGAAAGTGGAGGAGAAGAGGACACCAAGAAGTTCAAAGAGGTCTTCAGCTCCCAAAGTTTCTACCCAAAAGATGCAGCTGTCTAGTTCAAAGCAAAAGATTGACCAGGATGAAGGATCAAAGAAAAGGAGGGCTGTCCGGGGACAAGGAGGAAAAGCCCAGCGGAAGGATACAGAATATGAGGTTGAAGATGAGATTGAAGAGTTGTCCAGCTCTCAAGAGGACACTGATGAAGATTGGACAAGTTGAGGTTGTTACCATTCTAACATTGGTAAGCCACACCAGCAGGAGCTCGAATTGCATTGCAGGGGATTATATTCAGAATTCAGAATGCTCGAATTGCTCTACCAGGTTCTTTGATGCAGCTGGCTAATTGAAATTAAAGAAATTTAACCATAAGATGATATTGAAAAGTTTTTATCATAAAGTTAGGCAATGTAAAATTATGTTTTCGATATACTTGTGAGATCAACTGTTACACTTCCTAGAAACCAGACCAAGTTTAAGGTTAAAAATATTCACATGCAGATTGTTGTGCCTTTGGATAATATGATCCAATTTT

Coding sequence (CDS)

ATGGCGCGAGGATCATCGTCTTCAAAGAAGGACGAAGCAAAAGGAGAAATCAACCCAGAGATTGGGGAGCGAAAGCGGCTCAAGAAGCTCGCATTCTCCAATAACATACTTTCAGAAACCCAATCAAAGCCCCAGGCTTATCTGAGCCCTTCAGCGACGGTTCTGAAGCACCATGGCAAAGACATTGTCAAGAAATCACAGCGAAAAAACAGGTTCCTCTTCTCCTTTTCAGGCTTGCTTGCTCCCGTTAGTGGTGGCAAGATTGGCGAGCTCAAGGATTTAGCAACCAAGAATCCCGTTCTCTATCTCGATTTTCCTCAGGGGCGTATGAAGTTGTTTGGAACTATCATGTATCCGAAGAACAGATATTTAACTTTGCAGTTTTCTAAAGGTGGAAAGAATGTGACTTGTGAAGATTGTTTCGATAATATGATTGTCTTTTCTGATGCATGGTGGATTGGAACAAAAGATGAAAATCCAGAAGAGGCGTGTCTTGATTTTCCTAAAGAATTGACCTTGGGACAATGTGGAGAATATGACTTTAATGGTGGTGCTGGTGTTACCAGTACAAGTAAGCAGAGTGTTCAAAAGAAGGGAATCAATCCTGCTACAGAAAATTCATTTAAAGGAGAACATGGAGATGATTTAGTGGGCCTTGAAGCCAGCGTGACAAACTCTGTAAAGACTATGCCAGTTAGACATTCTGAAAGATCTGCCAGAAAAGTATTCAAGCTTCTTCTGAGGATGAGTCTACTGGCACGGACACTGATTTGTCTGAAGGAGAAGAAAAGAATATTGTCATACATGAGCCTTCAATTGGAGATCATGCTAACAGAAGATATCTCAGTTGAATCTATAGATGAAGATGCCGTGGAAATTAAACCTTCTTTTCTTGAAGGAAATCAGACATCAATTTCTAAAGAAAAGAAAAATTCTCGGGCTAAGGGAAGTGCTCAGAGTGATACTCGTGGACTTGTCCAGCCTACTCTACTTAGTTTGTTCAAGAAAGTGGAGGAGAAGAGGACACCAAGAAGTTCAAAGAGGTCTTCAGCTCCCAAAGTTTCTACCCAAAAGATGCAGCTGTCTAGTTCAAAGCAAAAGATTGACCAGGATGAAGGATCAAAGAAAAGGAGGGCTGTCCGGGGACAAGGAGGAAAAGCCCAGCGGAAGGATACAGAATATGAGGTTGAAGATGAGATTGAAGAGTTGTCCAGCTCTCAAGAGGACACTGATGAAGATTGGACAAGTTGA

Protein sequence

MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQSKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPKNRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYDFNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSARKVFKLLLRMSLLARTLICLKEKKRILSYMSLQLEIMLTEDISVESIDEDAVEIKPSFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVSTQKMQLSSSKQKIDQDEGSKKRRAVRGQGGKAQRKDTEYEVEDEIEELSSSQEDTDEDWTS

Homology

[Close]

BLAST of Cmc12g0336411 vs. NCBI nr
Match: XP_008467323.1 (PREDICTED: DNA-binding protein RHL1 isoform X2 [Cucumis melo])

HSP 1 Score: 710.3 bits (1832), Expect = 9.8e-201
Identity = 385/422 (91.23%), Postives = 390/422 (92.42%), Query Frame = 0


Query: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQSKPQAYLSPSATVLKHHGK 60
           MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQ+KPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180
           NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD
Sbjct: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180

Query: 181 FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR 240
           FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR
Sbjct: 181 FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR 240

Query: 241 KVFKLLLRMSLLART-----LICLKEKKRILSYMSL-QLEIMLTEDISVESIDEDAVEIK 300
           KVF      S    T     L   +EK  ++   S+       TEDISVESIDEDAVEIK
Sbjct: 241 KVFNFAEASSEDESTGTDTDLSEGEEKNIVIHEPSIGDHASEKTEDISVESIDEDAVEIK 300

Query: 301 PSFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKV 360
           PSFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSS PKV
Sbjct: 301 PSFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSVPKV 360

Query: 361 STQKMQLSSSKQKIDQDEGSKKRRAVRGQGGKAQRKDTEYEVEDEIEELSSSQEDTDEDW 417
           STQKMQLS SKQKIDQDEGSKKRRAVRGQGGKAQRKDTEYEVEDEIEELSSSQEDTDEDW
Sbjct: 361 STQKMQLSGSKQKIDQDEGSKKRRAVRGQGGKAQRKDTEYEVEDEIEELSSSQEDTDEDW 420

[Close]

BLAST of Cmc12g0336411 vs. NCBI nr
Match: XP_004137530.1 (DNA-binding protein RHL1 isoform X2 [Cucumis sativus] >KGN64211.1 hypothetical protein Csa_014154 [Cucumis sativus])

HSP 1 Score: 669.8 bits (1727), Expect = 1.5e-188
Identity = 367/431 (85.15%), Postives = 385/431 (89.33%), Query Frame = 0


Query: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQSKPQAYLSPSATVLKHHGK 60
           MARG SSSKKDEAKGEINPEI ERKRLKKLAFSN+ILSETQ++PQAYLSPSATVLKHHGK
Sbjct: 1   MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL+TKNP+LYLDFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPILYLDFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180
           NRYLTLQFS+GGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPK+LT+GQCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYD 180

Query: 181 FNGG---------AGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMP 240
           FNGG         AGVTSTSKQSVQ+KGINPA ENSFKGEHGDDLVGLEASVTNS+KT P
Sbjct: 181 FNGGAGVTSTSGVAGVTSTSKQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTP 240

Query: 241 VRHSERSARKVFKLLLRMS--LLARTLICL---KEKKRILSYMSL-QLEIMLTEDISVES 300
           VRHSERSARKVF      S    A T   L   +EK  ++   S+       TEDISVES
Sbjct: 241 VRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES 300

Query: 301 IDEDAVEIKPSFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRS 360
           IDEDAV+IKP FLEGNQTSISKEKK+ RAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRS
Sbjct: 301 IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRS 360

Query: 361 SKRSSAPKVSTQKMQLSSSKQKIDQDEGSKKRRAVRGQGGKAQRKDTEYEVEDEIEELSS 417
           SKRSSAPKVSTQKMQLS SKQKIDQDEGSKKRR VRGQGGKAQ+KDTEYEVEDEIE+LSS
Sbjct: 361 SKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGGKAQKKDTEYEVEDEIEDLSS 420

[Close]

BLAST of Cmc12g0336411 vs. NCBI nr
Match: XP_031744387.1 (DNA-binding protein RHL1 isoform X1 [Cucumis sativus])

HSP 1 Score: 663.7 bits (1711), Expect = 1.1e-186
Identity = 367/436 (84.17%), Postives = 385/436 (88.30%), Query Frame = 0


Query: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQSKPQAYLSPSATVLKHHGK 60
           MARG SSSKKDEAKGEINPEI ERKRLKKLAFSN+ILSETQ++PQAYLSPSATVLKHHGK
Sbjct: 1   MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL+TKNP+LYLDFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPILYLDFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180
           NRYLTLQFS+GGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPK+LT+GQCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYD 180

Query: 181 FNGG---------AGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMP 240
           FNGG         AGVTSTSKQSVQ+KGINPA ENSFKGEHGDDLVGLEASVTNS+KT P
Sbjct: 181 FNGGAGVTSTSGVAGVTSTSKQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTP 240

Query: 241 VRHSERSARKVFKLLLRMS--LLARTLICL---KEKKRILSYMSL-QLEIMLTEDISVES 300
           VRHSERSARKVF      S    A T   L   +EK  ++   S+       TEDISVES
Sbjct: 241 VRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES 300

Query: 301 IDEDAVEIKPSFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRS 360
           IDEDAV+IKP FLEGNQTSISKEKK+ RAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRS
Sbjct: 301 IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRS 360

Query: 361 SKRSSAPKVSTQKMQLSSSKQKIDQDEGSKKRRAVRGQGGKAQRKDTEY-----EVEDEI 417
           SKRSSAPKVSTQKMQLS SKQKIDQDEGSKKRR VRGQGGKAQ+KDTEY     EVEDEI
Sbjct: 361 SKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGGKAQKKDTEYELQQLEVEDEI 420

[Close]

BLAST of Cmc12g0336411 vs. NCBI nr
Match: TYJ99067.1 (DNA-binding protein RHL1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 652.9 bits (1683), Expect = 1.9e-183
Identity = 351/389 (90.23%), Postives = 357/389 (91.77%), Query Frame = 0


Query: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQSKPQAYLSPSATVLKHHGK 60
           MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQ+KPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180
           NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD
Sbjct: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180

Query: 181 FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR 240
           FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR
Sbjct: 181 FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR 240

Query: 241 KVFKLLLRMSLLART-----LICLKEKKRILSYMSLQLEIMLTEDISVESIDEDAVEIKP 300
           KVF      S    T     L   +EK  ++   S+       +DISVESIDEDAVEIKP
Sbjct: 241 KVFNFAEASSEDESTGTDTDLSEGEEKNIVIHEPSIGDH---AKDISVESIDEDAVEIKP 300

Query: 301 SFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVS 360
           SFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSS PKVS
Sbjct: 301 SFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSVPKVS 360

Query: 361 TQKMQLSSSKQKIDQDEGSKKRRAVRGQG 385
           TQKMQLS SKQKIDQDEGSKKRRAVRGQG
Sbjct: 361 TQKMQLSGSKQKIDQDEGSKKRRAVRGQG 386

[Close]

BLAST of Cmc12g0336411 vs. NCBI nr
Match: XP_038893754.1 (DNA-binding protein RHL1 isoform X1 [Benincasa hispida])

HSP 1 Score: 619.0 bits (1595), Expect = 3.0e-173
Identity = 342/424 (80.66%), Postives = 365/424 (86.08%), Query Frame = 0


Query: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQSKPQAYLSPSATVLKHHGK 60
           MARGSSSSK+DEAKGEI+P I  RKRLKKLAFSN+ILSETQ+KPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKRDEAKGEIDPGIAARKRLKKLAFSNHILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL TKNP+LYLDFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLRTKNPILYLDFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180
           NRYLTLQFS+GGKNV CED FDNMIVFSDAWWIGTKDENPEEA LDFP ELT GQCGE D
Sbjct: 121 NRYLTLQFSRGGKNVMCEDYFDNMIVFSDAWWIGTKDENPEEAHLDFPIELTTGQCGECD 180

Query: 181 FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR 240
           FNGGAGVT  SKQSVQKKGINPA ENS KGEHGDDLV L+ +VTNS+KT PVRHSERSAR
Sbjct: 181 FNGGAGVTGLSKQSVQKKGINPAVENSLKGEHGDDLVDLKDNVTNSIKTTPVRHSERSAR 240

Query: 241 KVFKLLLRMSLLART-----LICLKEKKRILSYMSLQLEIM-LTEDISVESIDEDAVEIK 300
           KVF      S    T     L   +EK  ++   S+       TED+SV+S+DEDA EI+
Sbjct: 241 KVFNFAEVSSEDESTSTYADLSEGEEKNIVIHEPSIGDHAREKTEDLSVDSMDEDAGEIR 300

Query: 301 PSFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKV 360
           P FLEGNQTSIS EKK+S AKGSAQSDTRGLVQPTLLSLFKKVEEKRT RSSKRSS PKV
Sbjct: 301 PPFLEGNQTSISTEKKSSLAKGSAQSDTRGLVQPTLLSLFKKVEEKRTSRSSKRSSTPKV 360

Query: 361 STQKMQLSSSKQKIDQDEGSKKRRAVRGQ--GGKAQRKDTEYEVEDEIEELSSSQEDTDE 417
           S QKMQLS SK+KIDQDEG +KRRAVRGQ  GGK Q+KDTEYEV+D+IEELSSSQEDTDE
Sbjct: 361 SVQKMQLSGSKRKIDQDEGLRKRRAVRGQDDGGKIQKKDTEYEVKDDIEELSSSQEDTDE 420

[Close]

BLAST of Cmc12g0336411 vs. ExPASy Swiss-Prot
Match: O81242 (DNA-binding protein RHL1 OS=Arabidopsis thaliana OX=3702 GN=RHL1 PE=1 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.4e-69
Identity = 170/365 (46.58%), Postives = 220/365 (60.27%), Query Frame = 0


Query: 5   SSSSKKDEAKG--EINPEIGERKRLKKLAFSNNILSETQSKPQAYLSPSATVLKHHGKDI 64
           +SSSKK  +KG  + + E  +RKRLK LA  N +LS++ +K  + L PS  VLKHHG DI
Sbjct: 4   ASSSKKGGSKGGDKDDAESKQRKRLKTLALDNQLLSDSPAKSHSSLKPSKQVLKHHGTDI 63

Query: 65  VKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPKNR 124
           ++KSQRKNRFLFSF GLLAP+S   IG+L  L+TKNPVLYL+FPQGRMKLFGTI+YPKNR
Sbjct: 64  IRKSQRKNRFLFSFPGLLAPISAATIGDLDRLSTKNPVLYLNFPQGRMKLFGTILYPKNR 123

Query: 125 YLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYDFN 184
           YLTLQFS+GGKNV C+D FDNMIVFS++WWIGTK+ENPEEA LDFPKEL   +  E+DF 
Sbjct: 124 YLTLQFSRGGKNVLCDDYFDNMIVFSESWWIGTKEENPEEARLDFPKELAQAENTEFDFQ 183

Query: 185 GGAGVTSTSKQ-------SVQKKGINPATEN----SFKGEHGDDLVGLEASV--TNSVKT 244
           GGAG  ++ K+       S   +  +P  +N    S  GE  DD + +   V  T  V+ 
Sbjct: 184 GGAGGAASVKKLASPEIGSQPTETDSPEVDNEDVLSEDGEFLDDKIQVTPPVQLTPPVQV 243

Query: 245 MPVRHSERSARKVFKLLLRMSLLARTLICLKEKKRILSYMSLQLEIMLTEDISVESIDED 304
            PVR S+R++ K F         A T       +   +      + +L  + S  S +E 
Sbjct: 244 TPVRQSQRNSGKKFN-------FAETSSEASSGESEGNTSDEDEKPLLEPESSTRSREES 303

Query: 305 AVEIKPSFLEGNQTSISKEK---KNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSS 352
                    +GN  + S  K   +    +   +S    LVQ TL +LFKK EEK    S 
Sbjct: 304 Q--------DGNGITASASKLPEELPAKREKLKSKDSKLVQATLSNLFKKAEEKTAGTSK 353

[Close]

BLAST of Cmc12g0336411 vs. ExPASy TrEMBL
Match: A0A1S3CTA5 (DNA-binding protein RHL1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504698 PE=4 SV=1)

HSP 1 Score: 710.3 bits (1832), Expect = 4.7e-201
Identity = 385/422 (91.23%), Postives = 390/422 (92.42%), Query Frame = 0


Query: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQSKPQAYLSPSATVLKHHGK 60
           MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQ+KPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180
           NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD
Sbjct: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180

Query: 181 FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR 240
           FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR
Sbjct: 181 FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR 240

Query: 241 KVFKLLLRMSLLART-----LICLKEKKRILSYMSL-QLEIMLTEDISVESIDEDAVEIK 300
           KVF      S    T     L   +EK  ++   S+       TEDISVESIDEDAVEIK
Sbjct: 241 KVFNFAEASSEDESTGTDTDLSEGEEKNIVIHEPSIGDHASEKTEDISVESIDEDAVEIK 300

Query: 301 PSFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKV 360
           PSFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSS PKV
Sbjct: 301 PSFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSVPKV 360

Query: 361 STQKMQLSSSKQKIDQDEGSKKRRAVRGQGGKAQRKDTEYEVEDEIEELSSSQEDTDEDW 417
           STQKMQLS SKQKIDQDEGSKKRRAVRGQGGKAQRKDTEYEVEDEIEELSSSQEDTDEDW
Sbjct: 361 STQKMQLSGSKQKIDQDEGSKKRRAVRGQGGKAQRKDTEYEVEDEIEELSSSQEDTDEDW 420

[Close]

BLAST of Cmc12g0336411 vs. ExPASy TrEMBL
Match: A0A0A0LVZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043140 PE=4 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 7.1e-189
Identity = 367/431 (85.15%), Postives = 385/431 (89.33%), Query Frame = 0


Query: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQSKPQAYLSPSATVLKHHGK 60
           MARG SSSKKDEAKGEINPEI ERKRLKKLAFSN+ILSETQ++PQAYLSPSATVLKHHGK
Sbjct: 1   MARG-SSSKKDEAKGEINPEIAERKRLKKLAFSNHILSETQARPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL+TKNP+LYLDFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPILYLDFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180
           NRYLTLQFS+GGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPK+LT+GQCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYD 180

Query: 181 FNGG---------AGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMP 240
           FNGG         AGVTSTSKQSVQ+KGINPA ENSFKGEHGDDLVGLEASVTNS+KT P
Sbjct: 181 FNGGAGVTSTSGVAGVTSTSKQSVQRKGINPAAENSFKGEHGDDLVGLEASVTNSIKTTP 240

Query: 241 VRHSERSARKVFKLLLRMS--LLARTLICL---KEKKRILSYMSL-QLEIMLTEDISVES 300
           VRHSERSARKVF      S    A T   L   +EK  ++   S+       TEDISVES
Sbjct: 241 VRHSERSARKVFNFAEASSEDESAGTDADLSEGEEKNIVIHEPSIGDHASEKTEDISVES 300

Query: 301 IDEDAVEIKPSFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRS 360
           IDEDAV+IKP FLEGNQTSISKEKK+ RAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRS
Sbjct: 301 IDEDAVKIKPPFLEGNQTSISKEKKSFRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRS 360

Query: 361 SKRSSAPKVSTQKMQLSSSKQKIDQDEGSKKRRAVRGQGGKAQRKDTEYEVEDEIEELSS 417
           SKRSSAPKVSTQKMQLS SKQKIDQDEGSKKRR VRGQGGKAQ+KDTEYEVEDEIE+LSS
Sbjct: 361 SKRSSAPKVSTQKMQLSGSKQKIDQDEGSKKRRVVRGQGGKAQKKDTEYEVEDEIEDLSS 420

[Close]

BLAST of Cmc12g0336411 vs. ExPASy TrEMBL
Match: A0A5D3BIX4 (DNA-binding protein RHL1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002710 PE=4 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 9.0e-184
Identity = 351/389 (90.23%), Postives = 357/389 (91.77%), Query Frame = 0


Query: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQSKPQAYLSPSATVLKHHGK 60
           MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQ+KPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180
           NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD
Sbjct: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180

Query: 181 FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR 240
           FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR
Sbjct: 181 FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR 240

Query: 241 KVFKLLLRMSLLART-----LICLKEKKRILSYMSLQLEIMLTEDISVESIDEDAVEIKP 300
           KVF      S    T     L   +EK  ++   S+       +DISVESIDEDAVEIKP
Sbjct: 241 KVFNFAEASSEDESTGTDTDLSEGEEKNIVIHEPSIGDH---AKDISVESIDEDAVEIKP 300

Query: 301 SFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSAPKVS 360
           SFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSS PKVS
Sbjct: 301 SFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSSKRSSVPKVS 360

Query: 361 TQKMQLSSSKQKIDQDEGSKKRRAVRGQG 385
           TQKMQLS SKQKIDQDEGSKKRRAVRGQG
Sbjct: 361 TQKMQLSGSKQKIDQDEGSKKRRAVRGQG 386

[Close]

BLAST of Cmc12g0336411 vs. ExPASy TrEMBL
Match: A0A6J1E8G5 (DNA-binding protein RHL1-like OS=Cucurbita moschata OX=3662 GN=LOC111431599 PE=4 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 2.5e-165
Identity = 330/425 (77.65%), Postives = 357/425 (84.00%), Query Frame = 0


Query: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQSKPQAYLSPSATVLKHHGK 60
           MARGSSSSK+DEAKGE+ PEI  RKRLKKLAF+NNILSETQ+KPQAY SPSATVLKHHGK
Sbjct: 1   MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDL TKNP+LYLDFPQGR+KLFGTI+YPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120

Query: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180
           NRYLTLQFS+GGKNV CEDCFDNMIVFSDAWWIGTKDENPEE  LDFPKE+T+G+CGEYD
Sbjct: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYD 180

Query: 181 FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR 240
           FNGGAGV STSKQSVQKKGIN A E S KGEHGDDLV LE ++TNS+KT PVRHSERSA 
Sbjct: 181 FNGGAGVASTSKQSVQKKGINRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240

Query: 241 KVFKLLLRMSL--LARTLICL---KEKKRILSYMSL-QLEIMLTEDISVESIDEDAVEIK 300
           KVF      S    A T       +EK  ++   S+       TE +SV+S D+DAVE +
Sbjct: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVE-R 300

Query: 301 PSFLEGNQTSISKEKKNSRAKGSAQSDTRG-LVQPTLLSLFKKVEEKRTPRSSKRSSAPK 360
           P FLEGN+T ISK K  SRAKG+AQS  RG LVQPTL SLFKKVEEKRTPRSSKRSS PK
Sbjct: 301 PRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEKRTPRSSKRSSTPK 360

Query: 361 VSTQKMQLSSSKQKIDQDEGSKKRRAVRGQ--GGKAQRKDTEYEVEDEIEELSSSQEDTD 417
           VS QKMQLS SKQKIDQDEG KKRR V+GQ  GGK +RKDTEYE ED+IEELSSSQEDTD
Sbjct: 361 VSAQKMQLSGSKQKIDQDEGLKKRRVVQGQDDGGKFRRKDTEYEDEDDIEELSSSQEDTD 420

[Close]

BLAST of Cmc12g0336411 vs. ExPASy TrEMBL
Match: A0A1S4DVK0 (DNA-binding protein RHL1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103504698 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 7.9e-164
Identity = 312/348 (89.66%), Postives = 317/348 (91.09%), Query Frame = 0


Query: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQSKPQAYLSPSATVLKHHGK 60
           MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQ+KPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180
           NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD
Sbjct: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180

Query: 181 FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR 240
           FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR
Sbjct: 181 FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR 240

Query: 241 KVFKLLLRMSLLART-----LICLKEKKRILSYMSL-QLEIMLTEDISVESIDEDAVEIK 300
           KVF      S    T     L   +EK  ++   S+       TEDISVESIDEDAVEIK
Sbjct: 241 KVFNFAEASSEDESTGTDTDLSEGEEKNIVIHEPSIGDHASEKTEDISVESIDEDAVEIK 300

Query: 301 PSFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRT 343
           PSFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEK T
Sbjct: 301 PSFLEGNQTSISKEKKNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKET 348

[Close]

BLAST of Cmc12g0336411 vs. TAIR 10
Match: AT1G48380.1 (root hair initiation protein root hairless 1 (RHL1) )

HSP 1 Score: 264.2 bits (674), Expect = 1.7e-70
Identity = 170/365 (46.58%), Postives = 220/365 (60.27%), Query Frame = 0


Query: 5   SSSSKKDEAKG--EINPEIGERKRLKKLAFSNNILSETQSKPQAYLSPSATVLKHHGKDI 64
           +SSSKK  +KG  + + E  +RKRLK LA  N +LS++ +K  + L PS  VLKHHG DI
Sbjct: 4   ASSSKKGGSKGGDKDDAESKQRKRLKTLALDNQLLSDSPAKSHSSLKPSKQVLKHHGTDI 63

Query: 65  VKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPKNR 124
           ++KSQRKNRFLFSF GLLAP+S   IG+L  L+TKNPVLYL+FPQGRMKLFGTI+YPKNR
Sbjct: 64  IRKSQRKNRFLFSFPGLLAPISAATIGDLDRLSTKNPVLYLNFPQGRMKLFGTILYPKNR 123

Query: 125 YLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYDFN 184
           YLTLQFS+GGKNV C+D FDNMIVFS++WWIGTK+ENPEEA LDFPKEL   +  E+DF 
Sbjct: 124 YLTLQFSRGGKNVLCDDYFDNMIVFSESWWIGTKEENPEEARLDFPKELAQAENTEFDFQ 183

Query: 185 GGAGVTSTSKQ-------SVQKKGINPATEN----SFKGEHGDDLVGLEASV--TNSVKT 244
           GGAG  ++ K+       S   +  +P  +N    S  GE  DD + +   V  T  V+ 
Sbjct: 184 GGAGGAASVKKLASPEIGSQPTETDSPEVDNEDVLSEDGEFLDDKIQVTPPVQLTPPVQV 243

Query: 245 MPVRHSERSARKVFKLLLRMSLLARTLICLKEKKRILSYMSLQLEIMLTEDISVESIDED 304
            PVR S+R++ K F         A T       +   +      + +L  + S  S +E 
Sbjct: 244 TPVRQSQRNSGKKFN-------FAETSSEASSGESEGNTSDEDEKPLLEPESSTRSREES 303

Query: 305 AVEIKPSFLEGNQTSISKEK---KNSRAKGSAQSDTRGLVQPTLLSLFKKVEEKRTPRSS 352
                    +GN  + S  K   +    +   +S    LVQ TL +LFKK EEK    S 
Sbjct: 304 Q--------DGNGITASASKLPEELPAKREKLKSKDSKLVQATLSNLFKKAEEKTAGTSK 353

[Close]

BLAST of Cmc12g0336411 vs. TAIR 10
Match: AT1G48380.2 (root hair initiation protein root hairless 1 (RHL1) )

HSP 1 Score: 248.1 bits (632), Expect = 1.3e-65
Identity = 170/396 (42.93%), Postives = 220/396 (55.56%), Query Frame = 0


Query: 5   SSSSKKDEAKG--EINPEIGERKRLKKLAFSNNILSETQSKPQAYLSPSATVLKHHGKDI 64
           +SSSKK  +KG  + + E  +RKRLK LA  N +LS++ +K  + L PS  VLKHHG DI
Sbjct: 4   ASSSKKGGSKGGDKDDAESKQRKRLKTLALDNQLLSDSPAKSHSSLKPSKQVLKHHGTDI 63

Query: 65  VKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPKNR 124
           ++KSQRKNRFLFSF GLLAP+S   IG+L  L+TKNPVLYL+FPQGRMKLFGTI+YPKNR
Sbjct: 64  IRKSQRKNRFLFSFPGLLAPISAATIGDLDRLSTKNPVLYLNFPQGRMKLFGTILYPKNR 123

Query: 125 YLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELT---------- 184
           YLTLQFS+GGKNV C+D FDNMIVFS++WWIGTK+ENPEEA LDFPKEL           
Sbjct: 124 YLTLQFSRGGKNVLCDDYFDNMIVFSESWWIGTKEENPEEARLDFPKELAQVDTFHLFLH 183

Query: 185 ---------------------LGQCGEYDFNGGAGVTSTSKQ-------SVQKKGINPAT 244
                                  +  E+DF GGAG  ++ K+       S   +  +P  
Sbjct: 184 FLFKTMVATEMFNMIRRILWFQAENTEFDFQGGAGGAASVKKLASPEIGSQPTETDSPEV 243

Query: 245 EN----SFKGEHGDDLVGLEASV--TNSVKTMPVRHSERSARKVFKLLLRMSLLARTLIC 304
           +N    S  GE  DD + +   V  T  V+  PVR S+R++ K F         A T   
Sbjct: 244 DNEDVLSEDGEFLDDKIQVTPPVQLTPPVQVTPVRQSQRNSGKKFN-------FAETSSE 303

Query: 305 LKEKKRILSYMSLQLEIMLTEDISVESIDEDAVEIKPSFLEGNQTSISKEK---KNSRAK 352
               +   +      + +L  + S  S +E          +GN  + S  K   +    +
Sbjct: 304 ASSGESEGNTSDEDEKPLLEPESSTRSREESQ--------DGNGITASASKLPEELPAKR 363

The following BLAST results are available for this feature:

BLAST of Cmc12g0336411 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008467323.1	9.8e-201	91.23	PREDICTED: DNA-binding protein RHL1 isoform X2 [Cucumis melo]	[more]
XP_004137530.1	1.5e-188	85.15	DNA-binding protein RHL1 isoform X2 [Cucumis sativus] >KGN64211.1 hypothetical p...	[more]
XP_031744387.1	1.1e-186	84.17	DNA-binding protein RHL1 isoform X1 [Cucumis sativus]	[more]
TYJ99067.1	1.9e-183	90.23	DNA-binding protein RHL1 isoform X2 [Cucumis melo var. makuwa]	[more]
XP_038893754.1	3.0e-173	80.66	DNA-binding protein RHL1 isoform X1 [Benincasa hispida]	[more]

BLAST of Cmc12g0336411 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81242	2.4e-69	46.58	DNA-binding protein RHL1 OS=Arabidopsis thaliana OX=3702 GN=RHL1 PE=1 SV=1	[more]

BLAST of Cmc12g0336411 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CTA5	4.7e-201	91.23	DNA-binding protein RHL1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504698 PE=4...	[more]
A0A0A0LVZ6	7.1e-189	85.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043140 PE=4 SV=1	[more]
A0A5D3BIX4	9.0e-184	90.23	DNA-binding protein RHL1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1E8G5	2.5e-165	77.65	DNA-binding protein RHL1-like OS=Cucurbita moschata OX=3662 GN=LOC111431599 PE=4...	[more]
A0A1S4DVK0	7.9e-164	89.66	DNA-binding protein RHL1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103504698 PE=4...	[more]

BLAST of Cmc12g0336411 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48380.1	1.7e-70	46.58	root hair initiation protein root hairless 1 (RHL1)	[more]
AT1G48380.2	1.3e-65	42.93	root hair initiation protein root hairless 1 (RHL1)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 348..367
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 395..416
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 337..416
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 302..323
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..394
IPR038859	DNA-binding protein RHL1	PANTHER	PTHR35698	DNA-BINDING PROTEIN RHL1	coord: 1..415

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0336411.1	Cmc12g0336411.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042023	DNA endoreduplication
molecular_function	GO:0003677	DNA binding