Cmc12g0335541 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0335541
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	ENDO3c domain-containing protein
Location	CMiso1.1chr12: 24475548 .. 24477919 (-)
RNA-Seq Expression	Cmc12g0335541
Synteny	Cmc12g0335541

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGGGATCCATACGATTAAGGAACGAATCGACTTCGAAAATTGACGGAACGATGAAGAAGACGACCGGTAAGAAGAGGCGTCTTCAAAAACCAGAACCACCGGCCGATTCTCACTCCGATAGACCTCGAGCTAAATCAATCAGAACTGTTAATGGCTTCAATTGCTCGACTACTGAGCCGTATCCAGCTCATTCTTCGCCCACTTCGGACGAATGTCTGTCCGTGAGGGACGATCTGTTGAATCTTCATGGTTTCCCGCGAGAGTTTCTTAAGTATCGGAAGGAGAGAGAGAGGCTGAGTGAGTGCTGCTCTTTCGTGGACGGCGTCCGCGCTGAGCACGGGGATAATGTGGAGTCGGAGCTCGTCGTTGAGAAGGAGAGCGTTTTGGATGGATTGGTGAAGACTGTTCTATCGCAGAACACTACGGAGGCTAATTCCGAGAGGGCTTTTGTTTCTCTCAAGTCCGCCTTTTCTACTTGGGAGGATGTGAGTCTTCTGCTTTCTTTGATTAGATTACGACTGTTCTTTTTTTTTATGTTGGATGACATGTTCTTAGGGGACAGATTTCTGTCAATTTCTTTTTGCAATGGAACGTCAATGAACAGCATTTAGATAATTGAAACTGAATCCTCTTAGTTCTTGTTTTTTCAATGTAATCTTCTATCCGATATCATTAGTTTAGTATCTTTTCTCTTGTTGTTCTTGCATAAACCATAACCATGAGTCAATTCCGAACTTGAACATCTCTATTTTCTAATCATACGAAAGTCATCTTTCATAATAAATCTTATATTTAGTTTAAGGGCAAGCAAAATTGCTATCTGAAATTCAAATTTGGACAATGTGATGGGAGAGTTGGAGTACGTAGGACAGACCTTCAATGGTTTTTCCCAGCAATCTTGATGAAGTAAGTGTGCCTTTAAAGAAAGGGGTTTTGATTTTTCATTTATGTACTCATATTTGAATGTAGGTTCTTTCAGCTGAATCCAAATGCATAGAGGATGCCATAAGATGTGGAGGATTAGCACCTACAAAAGCCTCGTGCATAAAAAATATATTGAGTTCTCTGTCAAAGAGAAGAGGCAAATTATGCTTGGAGTTCTTGCGCGATTTATCCGTCGATGAAATAAAGGCAGAGCTGTCGACTTTCAAAGGAATTGGCCCCAAAACGGTATTGTTTCTGAAAAGAATAACTGCCTTCGTAATCTAATTTATTTTCTAACATTTTAGATCTTGTCAGTTCATGGAACTATATCACCCAATGTTTGTATCCTACAAAGCACCGACACTCCTGTTGATTTTTCAAAGAAAACCCACTGGCCACTTTTCTTCCATCTTTGAAAGTCCAAACCCCCTCTCCACCCAATATTCTATTGCCTTTTTCATGAAATGATGAACGTTCTTTTAATCTTCAAAGGAAATATTCACAATTTGTCCAAATATGCACCCGTATATTTATTGTTATAAGAAAAACAAAGTGTGTCCCTAACATGTTGTGTCCTACATTTTAGAAATTAACGTGTCAATATTGCGTCGTGGGTAAATGTTTATGCTTGCGTCTTAGCCTTTATCTATAGGGATCCTAGTTTGAAGGCTTCTACTGTTTTTTTTCCTTTTCTGTGTGTTCTCATGGTTATCTATGGCTCGCATTGTTCACAAAATTCCTCAATGTTAAGGCATCATAGATTCTTCACAAGATTACGTTGGGGACATCTTGGTTGCTTAGTGTTATGGCATCAATAATCAATCATACAATTTAAAAATGTCAGGTGGCCTGTGTGCTGATGTTCAATCTTCAGAAAGATGATTTTCCAGTAGACACTCATGTGAGTAATTAAATTATTCTTTCGGATGACTTTATGATCCTTGTTCTCTAAAGACCATTGAAAGGTTTTGATTTTCCAACATGTTTGCAGGTATTTCAGATTGCAAAGTTCGTTGGTTGGGTCCCGGATGACGCAGACAGGAACAAAACATATCTTCATCTCAACAAAAGGATCCCAAATCATCTCAAGTTTGATCTCAACTGTCTTCTTTATACTCATGGAAAGCTCTGTTCGAAATGTACAAAGAAAACAGGCGCCCGACAACGAATGGGATCTGAAGAACAGTCTTGTCCTTTGTTCAAGTACTCCAATAATCCTTAAATCTGTGAATATAGATGTATATACCAAGAGTTTATTTATGAAAGCTTCTTTACTTGTCTCTTTTCTTTTGTTCCTAAGTTGTATAAAAATGCCATGCTAATATCTACAATTAGGAATGCGTTATCTGTAAGAAAGTGTTTCATTTAAGGCCATTATTATTATTATTATTTAATTGAAGAAACCTTGGACTTTGCCATTGGTTAAGAAAACATCTTTAATTCTTT

mRNA sequence

ATAGGGATCCATACGATTAAGGAACGAATCGACTTCGAAAATTGACGGAACGATGAAGAAGACGACCGGTAAGAAGAGGCGTCTTCAAAAACCAGAACCACCGGCCGATTCTCACTCCGATAGACCTCGAGCTAAATCAATCAGAACTGTTAATGGCTTCAATTGCTCGACTACTGAGCCGTATCCAGCTCATTCTTCGCCCACTTCGGACGAATGTCTGTCCGTGAGGGACGATCTGTTGAATCTTCATGGTTTCCCGCGAGAGTTTCTTAAGTATCGGAAGGAGAGAGAGAGGCTGAGTGAGTGCTGCTCTTTCGTGGACGGCGTCCGCGCTGAGCACGGGGATAATGTGGAGTCGGAGCTCGTCGTTGAGAAGGAGAGCGTTTTGGATGGATTGGTGAAGACTGTTCTATCGCAGAACACTACGGAGGCTAATTCCGAGAGGGCTTTTGTTTCTCTCAAGTCCGCCTTTTCTACTTGGGAGGATGTTCTTTCAGCTGAATCCAAATGCATAGAGGATGCCATAAGATGTGGAGGATTAGCACCTACAAAAGCCTCGTGCATAAAAAATATATTGAGTTCTCTGTCAAAGAGAAGAGGCAAATTATGCTTGGAGTTCTTGCGCGATTTATCCGTCGATGAAATAAAGGCAGAGCTGTCGACTTTCAAAGGAATTGGCCCCAAAACGGTGGCCTGTGTGCTGATGTTCAATCTTCAGAAAGATGATTTTCCAGTAGACACTCATGTATTTCAGATTGCAAAGTTCGTTGGTTGGGTCCCGGATGACGCAGACAGGAACAAAACATATCTTCATCTCAACAAAAGGATCCCAAATCATCTCAAGTTTGATCTCAACTGTCTTCTTTATACTCATGGAAAGCTCTGTTCGAAATGTACAAAGAAAACAGGCGCCCGACAACGAATGGGATCTGAAGAACAGTCTTGTCCTTTGTTCAAGTACTCCAATAATCCTTAAATCTGTGAATATAGATGTATATACCAAGAGTTTATTTATGAAAGCTTCTTTACTTGTCTCTTTTCTTTTGTTCCTAAGTTGTATAAAAATGCCATGCTAATATCTACAATTAGGAATGCGTTATCTGTAAGAAAGTGTTTCATTTAAGGCCATTATTATTATTATTATTTAATTGAAGAAACCTTGGACTTTGCCATTGGTTAAGAAAACATCTTTAATTCTTT

Coding sequence (CDS)

ATGAAGAAGACGACCGGTAAGAAGAGGCGTCTTCAAAAACCAGAACCACCGGCCGATTCTCACTCCGATAGACCTCGAGCTAAATCAATCAGAACTGTTAATGGCTTCAATTGCTCGACTACTGAGCCGTATCCAGCTCATTCTTCGCCCACTTCGGACGAATGTCTGTCCGTGAGGGACGATCTGTTGAATCTTCATGGTTTCCCGCGAGAGTTTCTTAAGTATCGGAAGGAGAGAGAGAGGCTGAGTGAGTGCTGCTCTTTCGTGGACGGCGTCCGCGCTGAGCACGGGGATAATGTGGAGTCGGAGCTCGTCGTTGAGAAGGAGAGCGTTTTGGATGGATTGGTGAAGACTGTTCTATCGCAGAACACTACGGAGGCTAATTCCGAGAGGGCTTTTGTTTCTCTCAAGTCCGCCTTTTCTACTTGGGAGGATGTTCTTTCAGCTGAATCCAAATGCATAGAGGATGCCATAAGATGTGGAGGATTAGCACCTACAAAAGCCTCGTGCATAAAAAATATATTGAGTTCTCTGTCAAAGAGAAGAGGCAAATTATGCTTGGAGTTCTTGCGCGATTTATCCGTCGATGAAATAAAGGCAGAGCTGTCGACTTTCAAAGGAATTGGCCCCAAAACGGTGGCCTGTGTGCTGATGTTCAATCTTCAGAAAGATGATTTTCCAGTAGACACTCATGTATTTCAGATTGCAAAGTTCGTTGGTTGGGTCCCGGATGACGCAGACAGGAACAAAACATATCTTCATCTCAACAAAAGGATCCCAAATCATCTCAAGTTTGATCTCAACTGTCTTCTTTATACTCATGGAAAGCTCTGTTCGAAATGTACAAAGAAAACAGGCGCCCGACAACGAATGGGATCTGAAGAACAGTCTTGTCCTTTGTTCAAGTACTCCAATAATCCTTAA

Protein sequence

MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRDDLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVLSQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPLFKYSNNP

Homology

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BLAST of Cmc12g0335541 vs. NCBI nr
Match: XP_008438070.1 (PREDICTED: putative DNA glycosylase At3g47830 [Cucumis melo] >TYJ99137.1 putative DNA glycosylase [Cucumis melo var. makuwa])

HSP 1 Score: 623.2 bits (1606), Expect = 1.2e-174
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300
           WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL
Sbjct: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300

Query: 301 FKYSNNP 308
           FKYSNNP
Sbjct: 301 FKYSNNP 307

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BLAST of Cmc12g0335541 vs. NCBI nr
Match: KAA0055207.1 (putative DNA glycosylase [Cucumis melo var. makuwa])

HSP 1 Score: 618.6 bits (1594), Expect = 2.9e-173
Identity = 304/307 (99.02%), Postives = 306/307 (99.67%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYP+HSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPSHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECC FVDGVRAEHGDNVESELVVEKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCFFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300
           WVPDDADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL
Sbjct: 241 WVPDDADRNKTYLHLNRRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300

Query: 301 FKYSNNP 308
           FKYSNNP
Sbjct: 301 FKYSNNP 307

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BLAST of Cmc12g0335541 vs. NCBI nr
Match: XP_011651429.1 (putative DNA glycosylase At3g47830 [Cucumis sativus] >KGN64289.1 hypothetical protein Csa_013980 [Cucumis sativus])

HSP 1 Score: 588.2 bits (1515), Expect = 4.1e-164
Identity = 290/307 (94.46%), Postives = 294/307 (95.77%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSD P+ KSIRTVNGFNCST +PYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCS VDGVRAEH DNVESE V EKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSERAF SLKSAF+ WEDVLSAESKCIEDAIRCGGLA TKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLEFLRDLS+DEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG
Sbjct: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300
           WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTG RQR GSEEQSCPL
Sbjct: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL 300

Query: 301 FKYSNNP 308
           FKYS NP
Sbjct: 301 FKYSYNP 307

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BLAST of Cmc12g0335541 vs. NCBI nr
Match: XP_038894941.1 (putative DNA glycosylase At3g47830 [Benincasa hispida])

HSP 1 Score: 552.0 bits (1421), Expect = 3.3e-153
Identity = 274/306 (89.54%), Postives = 286/306 (93.46%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEP  DS  + P AKSIRTVNGFN ST++PYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPSPDSCFNGPPAKSIRTVNGFNFSTSDPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCS VDG R EH DNVESE V EKESVLDGLV+TVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSIVDGGRGEHRDNVESEPVDEKESVLDGLVRTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSERAF SLKSAF+TWEDVLSAESK IEDAIRCGGLAPTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFSSLKSAFATWEDVLSAESKSIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLE+L  LSVDEIK EL+TFKGIGPKTVACVLMFNLQKDDFPVDTHVF+IAKF+G
Sbjct: 181 RRGKLCLEYLHGLSVDEIKTELTTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300
           WVPDDADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKCTK+TGARQR GSEEQSCPL
Sbjct: 241 WVPDDADRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCTKRTGARQRKGSEEQSCPL 300

Query: 301 FKYSNN 307
           FKYS +
Sbjct: 301 FKYSKD 306

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BLAST of Cmc12g0335541 vs. NCBI nr
Match: XP_022994647.1 (putative DNA glycosylase At3g47830 [Cucurbita maxima])

HSP 1 Score: 525.8 bits (1353), Expect = 2.5e-145
Identity = 261/307 (85.02%), Postives = 280/307 (91.21%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTT KKRRLQKPEP  DSHS+ PRAKSIRTVNGF+CST EPYPA+SSPTSDECLSVRD
Sbjct: 1   MKKTTCKKRRLQKPEPDGDSHSNGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREF+ YRKERERLSECCS VDG   E  +NV+S      ESVLDGLV+TVL
Sbjct: 61  DLLNLHGFPREFVIYRKERERLSECCSVVDGSGGELAENVKS------ESVLDGLVRTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSE+AF SLKSAF+TWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSEKAFASLKSAFATWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLE+L +LS+DE+KAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVF+IAKF+G
Sbjct: 181 RRGKLCLEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKT-GARQRMGSEEQSCP 300
           WVPD+ADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKC+K+T G RQR  SE QSCP
Sbjct: 241 WVPDEADRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGGRQRKVSENQSCP 300

Query: 301 LFKYSNN 307
           L KYS N
Sbjct: 301 LLKYSKN 301

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BLAST of Cmc12g0335541 vs. ExPASy Swiss-Prot
Match: F4JCQ3 (Putative DNA glycosylase At3g47830 OS=Arabidopsis thaliana OX=3702 GN=At3g47830 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.6e-89
Identity = 175/294 (59.52%), Postives = 210/294 (71.43%), Query Frame = 0


Query: 7   KKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRDDLLNLH 66
           K++RL K     D  S  P  KS  TV+G N     PYP    PT++EC  VRD LL+LH
Sbjct: 6   KRKRLNK----YDGESKTPANKS--TVDGGN-----PYPTLLRPTAEECRDVRDALLSLH 65

Query: 67  GFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVLSQNTTE 126
           GFP EF  YR++R R     S VD    +     E+    E+ESVLDGLVK +LSQNTTE
Sbjct: 66  GFPPEFANYRRQRLR---SFSAVDDHDTQCNLKSETLNETEEESVLDGLVKILLSQNTTE 125

Query: 127 ANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLC 186
           +NS+RAF SLK+ F  W+DVL+AESK IE+AIRCGGLAP KA CIKNIL+ L   RG+LC
Sbjct: 126 SNSQRAFASLKATFPKWDDVLNAESKSIENAIRCGGLAPKKAVCIKNILNRLQNERGRLC 185

Query: 187 LEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDA 246
           LE+LR LSV+E+K ELS FKG+GPKTV+CVLMFNLQ +DFPVDTHVF+IAK +GWVP  A
Sbjct: 186 LEYLRGLSVEEVKTELSHFKGVGPKTVSCVLMFNLQHNDFPVDTHVFEIAKALGWVPKTA 245

Query: 247 DRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 301
           DRNKTY+HLN++IP+ LKFDLNCLLYTHGK+CS C K     +   +    CPL
Sbjct: 246 DRNKTYVHLNRKIPDELKFDLNCLLYTHGKICSNCKKNVAKPKAKVASPDDCPL 285

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BLAST of Cmc12g0335541 vs. ExPASy Swiss-Prot
Match: C7IW64 (Protein ROS1A OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1A PE=1 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 4.8e-14
Identity = 69/226 (30.53%), Postives = 107/226 (47.35%), Query Frame = 0


Query: 35   GFNCSTTEPYPAHSSPTSDECLSVRDDLLNLHGFPREFLKYRKERERLSECCSFVDGVRA 94
            GF  +TT      +  +S+ C + + +   LHG     ++  K+ ++ S     VDG +A
Sbjct: 1335 GFQTATTS-----NLYSSNLCQNQKANSEVLHGVSSNLIENSKDDKKTSPKVP-VDGSKA 1394

Query: 95   EHGDNVESELVVEKESVLDGLVKTVLSQNTTEANSERAFVSLKSAFSTWEDVLSAESKCI 154
            +       +   +K    D L K VL  +  +  S+ A  S+      WE +  AE K I
Sbjct: 1395 KRPRVGAGK---KKTYDWDMLRKEVLYSHGNKERSQNAKDSI-----DWETIRQAEVKEI 1454

Query: 155  EDAIRCGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVA 214
             D IR  G+    A  IK+ L+ L +  G + LE+LR +  D+ K  L + +G+G K+V 
Sbjct: 1455 SDTIRERGMNNMLAERIKDFLNRLVRDHGSIDLEWLRYVDSDKAKDYLLSIRGLGLKSVE 1514

Query: 215  CVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 261
            CV +  L    FPVDT+V +I   +GWVP         LHL +  P
Sbjct: 1515 CVRLLTLHHMAFPVDTNVGRICVRLGWVPLQPLPESLQLHLLEMYP 1546

[Close]

BLAST of Cmc12g0335541 vs. ExPASy Swiss-Prot
Match: Q9SJQ6 (DNA glycosylase/AP lyase ROS1 OS=Arabidopsis thaliana OX=3702 GN=ROS1 PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 1.5e-12
Identity = 42/118 (35.59%), Postives = 63/118 (53.39%), Query Frame = 0


Query: 143  WEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAEL 202
            W+ + +A+ K + + I+  G+    A  I+  L  L    G + LE+LRD+  D+ K  L
Sbjct: 885  WKAIRAADVKEVAETIKSRGMNHKLAERIQGFLDRLVNDHGSIDLEWLRDVPPDKAKEYL 944

Query: 203  STFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 261
             +F G+G K+V CV +  L    FPVDT+V +IA  +GWVP         LHL +  P
Sbjct: 945  LSFNGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLEMYP 1002

[Close]

BLAST of Cmc12g0335541 vs. ExPASy Swiss-Prot
Match: B8YIE8 (Protein ROS1C OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1C PE=2 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 7.7e-12
Identity = 44/118 (37.29%), Postives = 61/118 (51.69%), Query Frame = 0


Query: 143  WEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAEL 202
            WE V  A+ + I  AIR  G+    A  I+  L+ L    G + LE+LRD+  D  K  L
Sbjct: 1339 WEAVRCADVQRISHAIRERGMNNVLAERIQKFLNRLVTDHGSIDLEWLRDVPPDSAKDYL 1398

Query: 203  STFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 261
             + +G+G K+V CV +  L    FPVDT+V +I   +GWVP         LHL +  P
Sbjct: 1399 LSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRICVRLGWVPIQPLPESLQLHLLELYP 1456

[Close]

BLAST of Cmc12g0335541 vs. ExPASy Swiss-Prot
Match: Q9SR66 (DEMETER-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=DML2 PE=3 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 2.2e-11
Identity = 52/161 (32.30%), Postives = 81/161 (50.31%), Query Frame = 0


Query: 101 ESELVVEKESV-LDGLVKTVLSQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIR 160
           ES    +K+SV  D L K   S       +ER   ++      W+ +   +   I + I 
Sbjct: 779 ESAKSTQKKSVDWDSLRKEAESGGRKRERTERTMDTV-----DWDALRCTDVHKIANIII 838

Query: 161 CGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMF 220
             G+    A  IK  L+ L K+ G + LE+LRD+  D+ K  L +  G+G K+V CV + 
Sbjct: 839 KRGMNNMLAERIKAFLNRLVKKHGSIDLEWLRDVPPDKAKEYLLSINGLGLKSVECVRLL 898

Query: 221 NLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 261
           +L +  FPVDT+V +IA  +GWVP     ++  +HL +  P
Sbjct: 899 SLHQIAFPVDTNVGRIAVRLGWVPLQPLPDELQMHLLELYP 934

[Close]

BLAST of Cmc12g0335541 vs. ExPASy TrEMBL
Match: A0A5D3BJ43 (Putative DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003430 PE=4 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 5.6e-175
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300
           WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL
Sbjct: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300

Query: 301 FKYSNNP 308
           FKYSNNP
Sbjct: 301 FKYSNNP 307

[Close]

BLAST of Cmc12g0335541 vs. ExPASy TrEMBL
Match: A0A1S3AW45 (putative DNA glycosylase At3g47830 OS=Cucumis melo OX=3656 GN=LOC103483287 PE=4 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 5.6e-175
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300
           WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL
Sbjct: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300

Query: 301 FKYSNNP 308
           FKYSNNP
Sbjct: 301 FKYSNNP 307

[Close]

BLAST of Cmc12g0335541 vs. ExPASy TrEMBL
Match: A0A5A7UKV1 (Putative DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00480 PE=4 SV=1)

HSP 1 Score: 618.6 bits (1594), Expect = 1.4e-173
Identity = 304/307 (99.02%), Postives = 306/307 (99.67%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYP+HSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPSHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECC FVDGVRAEHGDNVESELVVEKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCFFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG
Sbjct: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300
           WVPDDADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL
Sbjct: 241 WVPDDADRNKTYLHLNRRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300

Query: 301 FKYSNNP 308
           FKYSNNP
Sbjct: 301 FKYSNNP 307

[Close]

BLAST of Cmc12g0335541 vs. ExPASy TrEMBL
Match: A0A0A0LTF1 (ENDO3c domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045870 PE=4 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 2.0e-164
Identity = 290/307 (94.46%), Postives = 294/307 (95.77%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTTGKKRRLQKPEPPADSHSD P+ KSIRTVNGFNCST +PYPAHSSPTSDECLSVRD
Sbjct: 1   MKKTTGKKRRLQKPEPPADSHSDGPQFKSIRTVNGFNCSTIDPYPAHSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREFLKYRKERERLSECCS VDGVRAEH DNVESE V EKESVLDGLVKTVL
Sbjct: 61  DLLNLHGFPREFLKYRKERERLSECCSVVDGVRAEHRDNVESEFVDEKESVLDGLVKTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSERAF SLKSAF+ WEDVLSAESKCIEDAIRCGGLA TKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSERAFASLKSAFAAWEDVLSAESKCIEDAIRCGGLASTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLEFLRDLS+DEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG
Sbjct: 181 RRGKLCLEFLRDLSIDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 300
           WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTG RQR GSEEQSCPL
Sbjct: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGTRQRRGSEEQSCPL 300

Query: 301 FKYSNNP 308
           FKYS NP
Sbjct: 301 FKYSYNP 307

[Close]

BLAST of Cmc12g0335541 vs. ExPASy TrEMBL
Match: A0A6J1JWG0 (putative DNA glycosylase At3g47830 OS=Cucurbita maxima OX=3661 GN=LOC111490296 PE=4 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.2e-145
Identity = 261/307 (85.02%), Postives = 280/307 (91.21%), Query Frame = 0


Query: 1   MKKTTGKKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRD 60
           MKKTT KKRRLQKPEP  DSHS+ PRAKSIRTVNGF+CST EPYPA+SSPTSDECLSVRD
Sbjct: 1   MKKTTCKKRRLQKPEPDGDSHSNGPRAKSIRTVNGFDCSTNEPYPAYSSPTSDECLSVRD 60

Query: 61  DLLNLHGFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVL 120
           DLLNLHGFPREF+ YRKERERLSECCS VDG   E  +NV+S      ESVLDGLV+TVL
Sbjct: 61  DLLNLHGFPREFVIYRKERERLSECCSVVDGSGGELAENVKS------ESVLDGLVRTVL 120

Query: 121 SQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180
           SQNTTEANSE+AF SLKSAF+TWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK
Sbjct: 121 SQNTTEANSEKAFASLKSAFATWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSK 180

Query: 181 RRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVG 240
           RRGKLCLE+L +LS+DE+KAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVF+IAKF+G
Sbjct: 181 RRGKLCLEYLHNLSIDEVKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKFIG 240

Query: 241 WVPDDADRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKT-GARQRMGSEEQSCP 300
           WVPD+ADRNKTYLHLN+RIPNHLKFDLNCLLYTHGKLCSKC+K+T G RQR  SE QSCP
Sbjct: 241 WVPDEADRNKTYLHLNQRIPNHLKFDLNCLLYTHGKLCSKCSKRTGGGRQRKVSENQSCP 300

Query: 301 LFKYSNN 307
           L KYS N
Sbjct: 301 LLKYSKN 301

[Close]

BLAST of Cmc12g0335541 vs. TAIR 10
Match: AT3G47830.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 330.9 bits (847), Expect = 1.1e-90
Identity = 175/294 (59.52%), Postives = 210/294 (71.43%), Query Frame = 0


Query: 7   KKRRLQKPEPPADSHSDRPRAKSIRTVNGFNCSTTEPYPAHSSPTSDECLSVRDDLLNLH 66
           K++RL K     D  S  P  KS  TV+G N     PYP    PT++EC  VRD LL+LH
Sbjct: 6   KRKRLNK----YDGESKTPANKS--TVDGGN-----PYPTLLRPTAEECRDVRDALLSLH 65

Query: 67  GFPREFLKYRKERERLSECCSFVDGVRAEHGDNVESELVVEKESVLDGLVKTVLSQNTTE 126
           GFP EF  YR++R R     S VD    +     E+    E+ESVLDGLVK +LSQNTTE
Sbjct: 66  GFPPEFANYRRQRLR---SFSAVDDHDTQCNLKSETLNETEEESVLDGLVKILLSQNTTE 125

Query: 127 ANSERAFVSLKSAFSTWEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLC 186
           +NS+RAF SLK+ F  W+DVL+AESK IE+AIRCGGLAP KA CIKNIL+ L   RG+LC
Sbjct: 126 SNSQRAFASLKATFPKWDDVLNAESKSIENAIRCGGLAPKKAVCIKNILNRLQNERGRLC 185

Query: 187 LEFLRDLSVDEIKAELSTFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDA 246
           LE+LR LSV+E+K ELS FKG+GPKTV+CVLMFNLQ +DFPVDTHVF+IAK +GWVP  A
Sbjct: 186 LEYLRGLSVEEVKTELSHFKGVGPKTVSCVLMFNLQHNDFPVDTHVFEIAKALGWVPKTA 245

Query: 247 DRNKTYLHLNKRIPNHLKFDLNCLLYTHGKLCSKCTKKTGARQRMGSEEQSCPL 301
           DRNKTY+HLN++IP+ LKFDLNCLLYTHGK+CS C K     +   +    CPL
Sbjct: 246 DRNKTYVHLNRKIPDELKFDLNCLLYTHGKICSNCKKNVAKPKAKVASPDDCPL 285

[Close]

BLAST of Cmc12g0335541 vs. TAIR 10
Match: AT2G36490.1 (demeter-like 1 )

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-13
Identity = 42/118 (35.59%), Postives = 63/118 (53.39%), Query Frame = 0


Query: 143  WEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAEL 202
            W+ + +A+ K + + I+  G+    A  I+  L  L    G + LE+LRD+  D+ K  L
Sbjct: 885  WKAIRAADVKEVAETIKSRGMNHKLAERIQGFLDRLVNDHGSIDLEWLRDVPPDKAKEYL 944

Query: 203  STFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 261
             +F G+G K+V CV +  L    FPVDT+V +IA  +GWVP         LHL +  P
Sbjct: 945  LSFNGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLEMYP 1002

[Close]

BLAST of Cmc12g0335541 vs. TAIR 10
Match: AT3G10010.1 (demeter-like 2 )

HSP 1 Score: 71.2 bits (173), Expect = 1.6e-12
Identity = 52/161 (32.30%), Postives = 81/161 (50.31%), Query Frame = 0


Query: 101 ESELVVEKESV-LDGLVKTVLSQNTTEANSERAFVSLKSAFSTWEDVLSAESKCIEDAIR 160
           ES    +K+SV  D L K   S       +ER   ++      W+ +   +   I + I 
Sbjct: 779 ESAKSTQKKSVDWDSLRKEAESGGRKRERTERTMDTV-----DWDALRCTDVHKIANIII 838

Query: 161 CGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAELSTFKGIGPKTVACVLMF 220
             G+    A  IK  L+ L K+ G + LE+LRD+  D+ K  L +  G+G K+V CV + 
Sbjct: 839 KRGMNNMLAERIKAFLNRLVKKHGSIDLEWLRDVPPDKAKEYLLSINGLGLKSVECVRLL 898

Query: 221 NLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 261
           +L +  FPVDT+V +IA  +GWVP     ++  +HL +  P
Sbjct: 899 SLHQIAFPVDTNVGRIAVRLGWVPLQPLPDELQMHLLELYP 934

[Close]

BLAST of Cmc12g0335541 vs. TAIR 10
Match: AT5G04560.1 (HhH-GPD base excision DNA repair family protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-11
Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = 0


Query: 143  WEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAEL 202
            +E +  A    I +AI+  G+    A  IK+ L  + K  G + LE+LR+   D+ K  L
Sbjct: 1218 YEAIRRASISEISEAIKERGMNNMLAVRIKDFLERIVKDHGGIDLEWLRESPPDKAKDYL 1277

Query: 203  STFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 261
             + +G+G K+V CV +  L    FPVDT+V +IA  +GWVP         LHL +  P
Sbjct: 1278 LSIRGLGLKSVECVRLLTLHNLAFPVDTNVGRIAVRMGWVPLQPLPESLQLHLLELYP 1335

[Close]

BLAST of Cmc12g0335541 vs. TAIR 10
Match: AT5G04560.2 (HhH-GPD base excision DNA repair family protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-11
Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = 0


Query: 143  WEDVLSAESKCIEDAIRCGGLAPTKASCIKNILSSLSKRRGKLCLEFLRDLSVDEIKAEL 202
            +E +  A    I +AI+  G+    A  IK+ L  + K  G + LE+LR+   D+ K  L
Sbjct: 1476 YEAIRRASISEISEAIKERGMNNMLAVRIKDFLERIVKDHGGIDLEWLRESPPDKAKDYL 1535

Query: 203  STFKGIGPKTVACVLMFNLQKDDFPVDTHVFQIAKFVGWVPDDADRNKTYLHLNKRIP 261
             + +G+G K+V CV +  L    FPVDT+V +IA  +GWVP         LHL +  P
Sbjct: 1536 LSIRGLGLKSVECVRLLTLHNLAFPVDTNVGRIAVRMGWVPLQPLPESLQLHLLELYP 1593

The following BLAST results are available for this feature:

BLAST of Cmc12g0335541 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438070.1	1.2e-174	100.00	PREDICTED: putative DNA glycosylase At3g47830 [Cucumis melo] >TYJ99137.1 putativ...	[more]
KAA0055207.1	2.9e-173	99.02	putative DNA glycosylase [Cucumis melo var. makuwa]	[more]
XP_011651429.1	4.1e-164	94.46	putative DNA glycosylase At3g47830 [Cucumis sativus] >KGN64289.1 hypothetical pr...	[more]
XP_038894941.1	3.3e-153	89.54	putative DNA glycosylase At3g47830 [Benincasa hispida]	[more]
XP_022994647.1	2.5e-145	85.02	putative DNA glycosylase At3g47830 [Cucurbita maxima]	[more]

BLAST of Cmc12g0335541 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JCQ3	1.6e-89	59.52	Putative DNA glycosylase At3g47830 OS=Arabidopsis thaliana OX=3702 GN=At3g47830 ...	[more]
C7IW64	4.8e-14	30.53	Protein ROS1A OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1A PE=1 SV=2	[more]
Q9SJQ6	1.5e-12	35.59	DNA glycosylase/AP lyase ROS1 OS=Arabidopsis thaliana OX=3702 GN=ROS1 PE=1 SV=2	[more]
B8YIE8	7.7e-12	37.29	Protein ROS1C OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1C PE=2 SV=2	[more]
Q9SR66	2.2e-11	32.30	DEMETER-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=DML2 PE=3 SV=2	[more]

BLAST of Cmc12g0335541 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJ43	5.6e-175	100.00	Putative DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3AW45	5.6e-175	100.00	putative DNA glycosylase At3g47830 OS=Cucumis melo OX=3656 GN=LOC103483287 PE=4 ...	[more]
A0A5A7UKV1	1.4e-173	99.02	Putative DNA glycosylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A0A0LTF1	2.0e-164	94.46	ENDO3c domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045870 PE=4...	[more]
A0A6J1JWG0	1.2e-145	85.02	putative DNA glycosylase At3g47830 OS=Cucurbita maxima OX=3661 GN=LOC111490296 P...	[more]

BLAST of Cmc12g0335541 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47830.1	1.1e-90	59.52	DNA glycosylase superfamily protein	[more]
AT2G36490.1	1.1e-13	35.59	demeter-like 1	[more]
AT3G10010.1	1.6e-12	32.30	demeter-like 2	[more]
AT5G04560.1	1.8e-11	35.59	HhH-GPD base excision DNA repair family protein	[more]
AT5G04560.2	1.8e-11	35.59	HhH-GPD base excision DNA repair family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003265	HhH-GPD domain	SMART	SM00478	endo3end	coord: 120..277 e-value: 9.1E-16 score: 68.4
IPR003265	HhH-GPD domain	PFAM	PF00730	HhH-GPD	coord: 116..260 e-value: 6.0E-10 score: 39.5
IPR003265	HhH-GPD domain	CDD	cd00056	ENDO3c	coord: 115..275 e-value: 2.51817E-27 score: 102.32
IPR023170	Helix-hairpin-helix, base-excision DNA repair, C-terminal	GENE3D	1.10.1670.10		coord: 228..278 e-value: 7.0E-39 score: 135.8
None	No IPR available	GENE3D	1.10.340.30	Hypothetical protein; domain 2	coord: 108..227 e-value: 7.0E-39 score: 135.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	PANTHER	PTHR47203	FAMILY NOT NAMED	coord: 7..305
IPR011257	DNA glycosylase	SUPERFAMILY	48150	DNA-glycosylase	coord: 94..284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0335541.1	Cmc12g0335541.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006281	DNA repair
molecular_function	GO:0019104	DNA N-glycosylase activity
molecular_function	GO:0003824	catalytic activity