Cmc12g0335521 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0335521
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gibberellin-regulated protein 2
Location	CMiso1.1chr12: 24470925 .. 24472508 (-)
RNA-Seq Expression	Cmc12g0335521
Synteny	Cmc12g0335521

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTGGTTTCCAATTCAATATATATTACAAAGATTCCCCTAAACCTCTCTTCACTCTTATCCTTTCCATTTTATATCCTCTGTGAGGTTGAAGATGCCATTTGGGTTGGGGGCATGTCTGGAATCAGAGTAGTCAGTGGCACCTTTTTTCTTCTTTGTATTTTTGTATTTGTTGTCTCCCAAATATGTCCCCACCCCCCACAGCCTTTCCAGCTCAAGCTTTCCCCATTCTTTTGAAATTTACCCCACAAAGCATGTCCTTTTTTGGAATTTCAAGCTTAGTCTCTTTTCTTTATATCAATGATGTTAGAGTATTAGTTGAAGAATTTATATGAAAGGTCGAAACCATGGCAGTCCGTAAGTTCCTCCTCCTCCTTCTTCTTGGGGTCTTCGTCTTCCTCTGCCTTTCACAGGTAAAGCTTCTCTTTTCCTACCTCTTCCTTCTCTTCTGACCCTTCGCAATTGAATTTTGAATGAGTCTAGCTATTTTTTCTGGATTTCTTATGATGGATTTGCATATTTCTTAGATCTATGGTTTTAGTTCTTAGCTAAATTTTAAATAAAAATATATGTATGTATACTTTTTTTAGATTTTAAATTTTGGCTTTTTGGTAAAATGTAGATAACAAGAAATTTAGTGAAAGAAGTGTTTACTTATTATAGGTTTAATTGTTTTTTTCTTAACTAAAAACAAGTGATTAAGTTAATGTTGGTAATTAGTTGGTTTTTTATTTTTAGTTTTTCATCGAGCTTACAAATACTGCTTCTACATCTAAACCTCTCATTCAGAAACCGAAGCTAAAATTTAAAACCTAAAAAATATTTTTTTAAAACTAATTTTTGATTTTGAGAACTTAAAAACATAGTAAACACAAAAATGGAAGCTAATGAACTCATTAAACTAAAACTGAGATATAATAAATGTCGTCTTATTTACTAAGTTACGTAGGACACACATAACGCAGATATCTTCCGATGGCTACCAAGATCAGGAAGCTGGGATGAAGGAGATGGAATACGATGAAGATCAAGTGATGAGAGGGGCAAATAGAAGGCTAATGCAATACATAGGTGAGACGTGAGAGAGAAAATTAAACAATAGAATGATGGTTTTTAATTTATTCTTATAATTCATATATATGATTCGTTTATGGAAATTAAAAGAAATGAAATCAAAACAAAATTGGGAATAATATTATAATTACACAGATTGTGGAGGGGAATGCAAGCGTCGTTGTGGGGCGCACTCGAGGCCAAACCGGTGCATAAGAGCGTGCGGGACATGCTGTAGGCGGTGCAGATGTGTACCGCCAGGTACGTCAGGTAATCGCGAGATGTGTGGCACTTGCTACACGAGCATGACCACTCATGGGAACAAAACCAAGTGCCCTTAACTCTACCCAACGACTACTATGTCATCTTTTTTTCCCTTGGTTCGGTTATTCAATCTTTTGAGTCTTTTGTTTCCTTCTTCTTTGATGTATGTTTAGAATTATTAGTTGCAAAAACTTTCCTTTTTTGTTTCATTTGTATTTCCATGTTTATGTTTCCATTTACGTGCTTGGTTTTTTAAACTACATGATCTT

mRNA sequence

GCTGGTTTCCAATTCAATATATATTACAAAGATTCCCCTAAACCTCTCTTCACTCTTATCCTTTCCATTTTATATCCTCTGTGAGGTTGAAGATGCCATTTGGGTTGGGGGCATGTCTGGAATCAGAGTAGTCAGTGGCACCTTTTTTCTTCTTTGTATTTTTGTATTTGTTGTCTCCCAAATATGTCCCCACCCCCCACAGCCTTTCCAGCTCAAGCTTTCCCCATTCTTTTGAAATTTACCCCACAAAGCATGTCCTTTTTTGGAATTTCAAGCTTAGTCTCTTTTCTTTATATCAATGATGTTAGAGTATTAGTTGAAGAATTTATATGAAAGGTCGAAACCATGGCAGTCCGTAAGTTCCTCCTCCTCCTTCTTCTTGGGGTCTTCGTCTTCCTCTGCCTTTCACAGATATCTTCCGATGGCTACCAAGATCAGGAAGCTGGGATGAAGGAGATGGAATACGATGAAGATCAAGTGATGAGAGGGGCAAATAGAAGGCTAATGCAATACATAGATTGTGGAGGGGAATGCAAGCGTCGTTGTGGGGCGCACTCGAGGCCAAACCGGTGCATAAGAGCGTGCGGGACATGCTGTAGGCGGTGCAGATGTGTACCGCCAGGTACGTCAGGTAATCGCGAGATGTGTGGCACTTGCTACACGAGCATGACCACTCATGGGAACAAAACCAAGTGCCCTTAACTCTACCCAACGACTACTATGTCATCTTTTTTTCCCTTGGTTCGGTTATTCAATCTTTTGAGTCTTTTGTTTCCTTCTTCTTTGATGTATGTTTAGAATTATTAGTTGCAAAAACTTTCCTTTTTTGTTTCATTTGTATTTCCATGTTTATGTTTCCATTTACGTGCTTGGTTTTTTAAACTACATGATCTT

Coding sequence (CDS)

ATGGCAGTCCGTAAGTTCCTCCTCCTCCTTCTTCTTGGGGTCTTCGTCTTCCTCTGCCTTTCACAGATATCTTCCGATGGCTACCAAGATCAGGAAGCTGGGATGAAGGAGATGGAATACGATGAAGATCAAGTGATGAGAGGGGCAAATAGAAGGCTAATGCAATACATAGATTGTGGAGGGGAATGCAAGCGTCGTTGTGGGGCGCACTCGAGGCCAAACCGGTGCATAAGAGCGTGCGGGACATGCTGTAGGCGGTGCAGATGTGTACCGCCAGGTACGTCAGGTAATCGCGAGATGTGTGGCACTTGCTACACGAGCATGACCACTCATGGGAACAAAACCAAGTGCCCTTAA

Protein sequence

MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP

Homology

[Close]

BLAST of Cmc12g0335521 vs. NCBI nr
Match: XP_008438104.1 (PREDICTED: snakin-2-like isoform X2 [Cucumis melo])

HSP 1 Score: 247.7 bits (631), Expect = 5.1e-62
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG 60
           MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG 60

Query: 61  GECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP 119
           GECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP
Sbjct: 61  GECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP 118

[Close]

BLAST of Cmc12g0335521 vs. NCBI nr
Match: XP_008438094.1 (PREDICTED: snakin-2-like isoform X1 [Cucumis melo])

HSP 1 Score: 240.4 bits (612), Expect = 8.1e-60
Identity = 118/126 (93.65%), Postives = 118/126 (93.65%), Query Frame = 0


Query: 1   MAVRKFLLLLLLGVFVFLCLS--------QISSDGYQDQEAGMKEMEYDEDQVMRGANRR 60
           MAVRKFLLLLLLGVFVFLCLS        QISSDGYQDQEAGMKEMEYDEDQVMRGANRR
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQLRRTHITQISSDGYQDQEAGMKEMEYDEDQVMRGANRR 60

Query: 61  LMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHG 119
           LMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHG
Sbjct: 61  LMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHG 120

[Close]

BLAST of Cmc12g0335521 vs. NCBI nr
Match: KGN64291.1 (hypothetical protein Csa_013222 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 8.7e-54
Identity = 106/118 (89.83%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG 60
           MAVRKFLLLLLLGVFVFLCLSQ+SS+GY  +E GMKEMEYDE ++MRGANRRLMQYIDCG
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQVSSNGY--EEEGMKEMEYDE-KMMRGANRRLMQYIDCG 60

Query: 61  GECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP 119
           G+C+RRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGN+TKCP
Sbjct: 61  GQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP 115

[Close]

BLAST of Cmc12g0335521 vs. NCBI nr
Match: XP_038895055.1 (snakin-2-like [Benincasa hispida])

HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46
Identity = 98/118 (83.05%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 1   MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG 60
           MAVR FLLLLLLG+FV L LSQ+SSDGY   E GM EMEYDE +VMRG NRRLMQ I+CG
Sbjct: 1   MAVRNFLLLLLLGLFVILSLSQVSSDGY--PEEGMMEMEYDE-KVMRGTNRRLMQNINCG 60

Query: 61  GECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP 119
            ECKRRCGAHSRPNRCIRACGTCC RC+CVP GTSGNREMCGTCYT+MTTHGNKTKCP
Sbjct: 61  WECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTKCP 115

[Close]

BLAST of Cmc12g0335521 vs. NCBI nr
Match: KAA0055209.1 (snakin-2-like isoform X1 [Cucumis melo var. makuwa] >TYJ99139.1 snakin-2-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 35  MKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGT 94
           MKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGT
Sbjct: 1   MKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGT 60

Query: 95  SGNREMCGTCYTSMTTHGNKTKCP 119
           SGNREMCGTCYTSMTTHGNKTKCP
Sbjct: 61  SGNREMCGTCYTSMTTHGNKTKCP 84

[Close]

BLAST of Cmc12g0335521 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-19
Identity = 44/62 (70.97%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 57  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTK 116
           IDCGG C  RC   SRP  C RACGTCC RC CVPPGTSGN E C  CY S+TTHGNK K
Sbjct: 44  IDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETC-PCYASLTTHGNKRK 103

Query: 117 CP 119
           CP
Sbjct: 104 CP 104

[Close]

BLAST of Cmc12g0335521 vs. ExPASy Swiss-Prot
Match: Q9LFR3 (Gibberellin-regulated protein 14 OS=Arabidopsis thaliana OX=3702 GN=GASA14 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.8e-18
Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 57  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTK 116
           IDC   C  RCG HSR N C+RAC TCC RC+CVPPGT GN+E CG+CY +M T G K+K
Sbjct: 214 IDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSK 273

Query: 117 CP 119
           CP
Sbjct: 274 CP 275

[Close]

BLAST of Cmc12g0335521 vs. ExPASy Swiss-Prot
Match: P46687 (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.1e-18
Identity = 39/62 (62.90%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 57  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTK 116
           IDCGG CK RC   SRPN C+RAC +CC RC CVPPGT+GN  +C  CY S+TT G + K
Sbjct: 39  IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLC-PCYASITTRGGRLK 98

Query: 117 CP 119
           CP
Sbjct: 99  CP 99

[Close]

BLAST of Cmc12g0335521 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.4e-17
Identity = 39/62 (62.90%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 57  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTK 116
           IDCGG CK RC   SR   C+RAC +CC RC CVPPGTSGN  +C  CY S+TTHG + K
Sbjct: 39  IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLC-PCYASITTHGGRLK 98

Query: 117 CP 119
           CP
Sbjct: 99  CP 99

[Close]

BLAST of Cmc12g0335521 vs. ExPASy Swiss-Prot
Match: F4IQJ4 (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 6.8e-17
Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 57  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTK 116
           IDC   C+ RC   SRPN C RACGTCC RC CV PGTSGN + C  CY S+TTHG + K
Sbjct: 34  IDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKC-PCYGSLTTHGGRRK 93

Query: 117 CP 119
           CP
Sbjct: 94  CP 94

[Close]

BLAST of Cmc12g0335521 vs. ExPASy TrEMBL
Match: A0A1S3AVJ9 (snakin-2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.5e-62
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG 60
           MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG 60

Query: 61  GECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP 119
           GECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP
Sbjct: 61  GECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP 118

[Close]

BLAST of Cmc12g0335521 vs. ExPASy TrEMBL
Match: A0A1S3AW57 (snakin-2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 3.9e-60
Identity = 118/126 (93.65%), Postives = 118/126 (93.65%), Query Frame = 0


Query: 1   MAVRKFLLLLLLGVFVFLCLS--------QISSDGYQDQEAGMKEMEYDEDQVMRGANRR 60
           MAVRKFLLLLLLGVFVFLCLS        QISSDGYQDQEAGMKEMEYDEDQVMRGANRR
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQLRRTHITQISSDGYQDQEAGMKEMEYDEDQVMRGANRR 60

Query: 61  LMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHG 119
           LMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHG
Sbjct: 61  LMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHG 120

[Close]

BLAST of Cmc12g0335521 vs. ExPASy TrEMBL
Match: A0A0A0LW79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045890 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.2e-54
Identity = 106/118 (89.83%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG 60
           MAVRKFLLLLLLGVFVFLCLSQ+SS+GY  +E GMKEMEYDE ++MRGANRRLMQYIDCG
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQVSSNGY--EEEGMKEMEYDE-KMMRGANRRLMQYIDCG 60

Query: 61  GECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP 119
           G+C+RRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGN+TKCP
Sbjct: 61  GQCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP 115

[Close]

BLAST of Cmc12g0335521 vs. ExPASy TrEMBL
Match: A0A5A7UP17 (Snakin-2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003450 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.2e-44
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 35  MKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGT 94
           MKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGT
Sbjct: 1   MKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGT 60

Query: 95  SGNREMCGTCYTSMTTHGNKTKCP 119
           SGNREMCGTCYTSMTTHGNKTKCP
Sbjct: 61  SGNREMCGTCYTSMTTHGNKTKCP 84

[Close]

BLAST of Cmc12g0335521 vs. ExPASy TrEMBL
Match: A0A1S3U3C0 (snakin-2-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106761477 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.6e-35
Identity = 78/119 (65.55%), Postives = 93/119 (78.15%), Query Frame = 0


Query: 1   MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEY-DEDQVMRGANRRLMQYIDC 60
           MA R F   L+LG+ + +CL ++SSD   ++E   +E+++ +E  VMR  NRRLMQ IDC
Sbjct: 1   MASRAF---LMLGMLLLVCLVKVSSDPKIEEETLEEELQFPNEPLVMRDGNRRLMQEIDC 60

Query: 61  GGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP 119
           GG CK RC AHSRPN C RACGTCC RC+CVPPGTSGNRE+CGTCYTSMTTHGNKTKCP
Sbjct: 61  GGLCKSRCSAHSRPNVCTRACGTCCVRCKCVPPGTSGNRELCGTCYTSMTTHGNKTKCP 116

[Close]

BLAST of Cmc12g0335521 vs. TAIR 10
Match: AT5G14920.1 (Gibberellin-regulated family protein )

HSP 1 Score: 92.8 bits (229), Expect = 2.0e-19
Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 57  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTK 116
           IDC   C  RCG HSR N C+RAC TCC RC+CVPPGT GN+E CG+CY +M T G K+K
Sbjct: 214 IDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSK 273

Query: 117 CP 119
           CP
Sbjct: 274 CP 275

[Close]

BLAST of Cmc12g0335521 vs. TAIR 10
Match: AT4G09600.1 (GAST1 protein homolog 3 )

HSP 1 Score: 91.7 bits (226), Expect = 4.4e-19
Identity = 39/62 (62.90%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 57  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTK 116
           IDCGG CK RC   SRPN C+RAC +CC RC CVPPGT+GN  +C  CY S+TT G + K
Sbjct: 39  IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLC-PCYASITTRGGRLK 98

Query: 117 CP 119
           CP
Sbjct: 99  CP 99

[Close]

BLAST of Cmc12g0335521 vs. TAIR 10
Match: AT4G09610.1 (GAST1 protein homolog 2 )

HSP 1 Score: 90.5 bits (223), Expect = 9.7e-19
Identity = 39/62 (62.90%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 57  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTK 116
           IDCGG CK RC   SR   C+RAC +CC RC CVPPGTSGN  +C  CY S+TTHG + K
Sbjct: 39  IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLC-PCYASITTHGGRLK 98

Query: 117 CP 119
           CP
Sbjct: 99  CP 99

[Close]

BLAST of Cmc12g0335521 vs. TAIR 10
Match: AT2G18420.1 (Gibberellin-regulated family protein )

HSP 1 Score: 88.2 bits (217), Expect = 4.8e-18
Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 57  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTK 116
           IDC   C+ RC   SRPN C RACGTCC RC CV PGTSGN + C  CY S+TTHG + K
Sbjct: 34  IDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKC-PCYGSLTTHGGRRK 93

Query: 117 CP 119
           CP
Sbjct: 94  CP 94

[Close]

BLAST of Cmc12g0335521 vs. TAIR 10
Match: AT1G22690.1 (Gibberellin-regulated family protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-17
Identity = 46/108 (42.59%), Postives = 59/108 (54.63%), Query Frame = 0


Query: 14  VFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQY---IDCGGECKRRCGAH 73
           +  FL LSQ+ ++           +    D+    A +R   +   I+CG  C RRC   
Sbjct: 13  IISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRCSKT 72

Query: 74  SRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP 119
           SR   C RACG+CC +C+CVPPGTSGN   C  CY S+ THGNK KCP
Sbjct: 73  SRKKVCHRACGSCCAKCQCVPPGTSGNTASC-PCYASIRTHGNKLKCP 119

The following BLAST results are available for this feature:

BLAST of Cmc12g0335521 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438104.1	5.1e-62	100.00	PREDICTED: snakin-2-like isoform X2 [Cucumis melo]	[more]
XP_008438094.1	8.1e-60	93.65	PREDICTED: snakin-2-like isoform X1 [Cucumis melo]	[more]
KGN64291.1	8.7e-54	89.83	hypothetical protein Csa_013222 [Cucumis sativus]	[more]
XP_038895055.1	1.3e-46	83.05	snakin-2-like [Benincasa hispida]	[more]
KAA0055209.1	1.1e-43	100.00	snakin-2-like isoform X1 [Cucumis melo var. makuwa] >TYJ99139.1 snakin-2-like is...	[more]

BLAST of Cmc12g0335521 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93X17	1.5e-19	70.97	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
Q9LFR3	2.8e-18	64.52	Gibberellin-regulated protein 14 OS=Arabidopsis thaliana OX=3702 GN=GASA14 PE=1 ...	[more]
P46687	6.1e-18	62.90	Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV...	[more]
P46688	1.4e-17	62.90	Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV...	[more]
F4IQJ4	6.8e-17	62.90	Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 ...	[more]

BLAST of Cmc12g0335521 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AVJ9	2.5e-62	100.00	snakin-2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1	[more]
A0A1S3AW57	3.9e-60	93.65	snakin-2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1	[more]
A0A0A0LW79	4.2e-54	89.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045890 PE=3 SV=1	[more]
A0A5A7UP17	5.2e-44	100.00	Snakin-2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3U3C0	2.6e-35	65.55	snakin-2-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106761477 PE=3 SV=1	[more]

BLAST of Cmc12g0335521 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14920.1	2.0e-19	64.52	Gibberellin-regulated family protein	[more]
AT4G09600.1	4.4e-19	62.90	GAST1 protein homolog 3	[more]
AT4G09610.1	9.7e-19	62.90	GAST1 protein homolog 2	[more]
AT2G18420.1	4.8e-18	62.90	Gibberellin-regulated family protein	[more]
AT1G22690.1	1.1e-17	42.59	Gibberellin-regulated family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 58..118 e-value: 4.6E-20 score: 71.5
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 16..118
None	No IPR available	PANTHER	PTHR23201:SF18	GIBBERELLIN-REGULATED PROTEIN 2-RELATED	coord: 16..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0335521.1	Cmc12g0335521.1	mRNA