Cmc12g0333621 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0333621
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr12: 23444436 .. 23447741 (+)
RNA-Seq ExpressionCmc12g0333621
SyntenyCmc12g0333621
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAACATGTTTTTAGTAATTAAATTAAACTCATGCATGCTTTCACATTTATTATAATCAACTAAAAAACAGTCCACAAACTGAAAAAGATGGAAAATATAAAGTAACATTTCACTTAGTTAAAACTATCAATATTATTCTTAAATATAAACTTCTTCCATTTGCCGCTGGCCAACCAAGAAACTGCAGTCTTTGATTAATAGTAGCTTCTTCATCTCCATCTCATCATTCTCCTCACACCAACTATAAGAAAATCAATTATTTGGAGTATTTTGTAATTGACATCATCCACAAAACCAAAGTAGAATATTCTTCTTGCTTCGTTTGTGAAAATGGTAAAGAACAATATGTTGATTCCAACTGGAAAACCAATTGCCATACTAATATAGAAGCCAACCATTTCCAAGTCATTTTCATTGCCATATTCTTTTTCTTCTTCACTTGTTGAAACAAGAACATTGTTTGAACTTTCATCTCCTGCACACTTGATTTGAAGAGGAGGTCCACATAAAGAAGGATTCCCTTCATAGATGGAGGGATCTTCCAACGTCTGAAGTTGATTACCCATTGGTATTTTTCCTGTTAAATTGTTGAATGACATATTCAAATGTGTCAAGAAATTTAGTGAAGCTAGACTGGCAGGAATTCTGCCACTCAGATTGTTGTATGACAGATCCAATGTCTCTAATTTCTTCATGGCTCCAATATTTTCTGGTATGATACCAACAAAGTTGTTGTTCGATAAGTTTAAGGTATCAAGTTGGACAAGGTTTGTAATCTCCTTTGGAATTTCACCAGTCAATTTATTCCTTGAAAGATCTATTGTCAAAACCGAGTCAAGAATAGTATTGTATTCAGATTCCATTCCTTTCATAACCAATCTTGTATTTTCGTCATAGCTGTAATAGGCTCCACTATTGGTTTGATAAGATCTCAATCCATCTCTGTAGTAATCTTGCACGAAAAATTTCCAGTTATGCAAACAATTTGGGAGCTTCCCATCAAGATGGTTGTTTGATAGATCTAGCACACAGATGGCAGAAAGATTGCACCATTGTCTTGGGATGGTTCCACTGAAACGGTTCGACCGTAGGTTTAACAATTGTAGCTTTGGCACAGCTACTCCTAACCATGACGGTAGGTTTCCGGTTAAGAATATGTTTTCAGAAAGATCAAGGCTTGTGAGGAGTGAACAATTCTGCAAAGAATTGGGAATTTCTCCATGGAGATTGTTGTTGTTCAACATCAATTTGTTGAGGGATGTCAACAAACCTATTGTGGTTGGGATTTTTCCGTGAAGATTGTTATTGGCTAAATCAACAACGAGTAATGATTTGAGTCTACTCCAATCGTCAAAGAGCTTCCCTGAAAGTTGGTTGTGTGACATTGAAAGTACTTCAAGATGATTCATGGTTTTAATGGATGATGGAATTGTACCATGGAGATTATTTTCTGACAAATCTAATCTATACAAATTGGGCATTGGATCATTGATGGTTAAGGGTATAGTGCCCAACAATTGATTATTTCGAAGATCTAAGTGTCTTAGATTAGGATATCTTAAGGGAATAATTGAATCATTTTCACCGCTATCATTTTTCTGATGGGATGTGAATATGTGAGATAGCTTTAGATTGAATAAGTTGTAGGACAAATCCAACCTAATGACTTGAGAAGATACCTTAGAAATCCACTCGTTTGGTAGAGAGCCAAAAATCCCAACATTAGAGAGAACAATCTCAGTTAGTTGAGTTTGAGTTCGAAGCCAAATTGGAAATTGAGAGCGAATGAGACAATTTTCCAAAAAAAGTATCTTGAGACTAAAGGGAGGAATCCAATCGTATGTGATGTTGAAAACAAAAGTTTGTATACTTTTCGTCCACACTTGAAGGATTTTCAATTCTGTCAAGTTCATTAAGTGAACTTCTGTTATAGTTGTATTCCATGAATTCCCATAGTCTTCGTAATAAACCAATTTTGAAAGTTGACCAAAACTCGAAGGTATAGTTCCATTCAAAACATTACTCGAAACATGTAGATGCTCCAATAATGACAAATTACCTATTGAATTTGGAAGTGAACCCCATAAAAAATTATCAGAAAGATTCAAGAATCGAAGATTCTTGAATGTCCCTAGTGAATTTGGTATCTCTCCCACAATTTTATTACCTACCAAATCCAAGGATTCCAACCTATTGCGAGAACAATTTGAGAAACTATCCAAAAAAGTTCCCAGTTTAAAATCATAATGATTGTATGCAAGGTGCAAAAATCGTAACTTACAAAGATTTTGTGAAAAGATTGGAGGGGTGTGATCTCCAATATCATTACTCAAACTATTCCCAGTCAACTCAAGAACTTGGAGATTTTTCAATTTCACAAAATTATGAGGAATTGTTCCTCGAAAAATATTGTTATTTAAATCAAGTGTTGAAAGACTAGTCAAATTCGATAGCCATAAAGGTATGGAAGAATTTATCAAATTACTTGATAAATCAAGAACTCTAAGTGAAGTGAGATTTAAAAAAGCAATTGAAGTATCGAAACTTAAAATACCACAATTACTTAAGTGCAGCTCTGATAAAGAAGAAAGTCCATTGATTGTATGCATCCAATTTCTTTCAACACTAATTAAATTCACACCTCCAAGATTAAGGTACTCAAGAGAAGAAAGACCGGAGAGCCATTGCAAGTTTTTAACATGTAACATGAATCCTCGTTCGTCGGAAAGATCTAGATAACTCAAATTAGTCAAATTTCTAAGATAAATGGGAATCTGTCCACTAAAATTAGCAGAAGAAAGCTTGAGATACCTTAAACTTTTGAGCATCCCAAGGAAATATGGGATTGAAGCACCTTCAAAATCATTGAAACTCAAGTCCAAATAGTACAAATATTTGAGCTCAAGTAGAGAGTGACTTATTTTCCCTGTCAAGCAAGTCTTTTGGAACTCTCGTAAGAAATACTTGAGATCTATCCAAGGTCGTTCTAGATCTCCATACTCAACAAATTGAGAAAGGGCAGAGCCCAATGAATTGTGTAGATCAATTTTAATGACTTTTCCTGAAATGGGATTACAAGTTATGCCATGCCATTGACAGCAATTATGGCCGACCCAAGAAGAAAGTCGAGCAGAAGGATCTAACAAGCCTTGTTTGAAGGAAATCAAGGCTTCCCTCTCAATATCGCTACAATTATTTGAAGTATAAGCACCAACGATGGTAGTTGAGAGCAATATTACACAAAGCAGCCATACAAATGAGACATAACGAGTTATGAAATAATGCTTATCCATATGTTTTTTA

mRNA sequence

CAAAAACATGTTTTTAGTAATTAAATTAAACTCATGCATGCTTTCACATTTATTATAATCAACTAAAAAACAGTCCACAAACTGAAAAAGATGGAAAATATAAAGTAACATTTCACTTAGTTAAAACTATCAATATTATTCTTAAATATAAACTTCTTCCATTTGCCGCTGGCCAACCAAGAAACTGCAGTCTTTGATTAATAGTAGCTTCTTCATCTCCATCTCATCATTCTCCTCACACCAACTATAAGAAAATCAATTATTTGGAGTATTTTGTAATTGACATCATCCACAAAACCAAAGTAGAATATTCTTCTTGCTTCGTTTGTGAAAATGGTAAAGAACAATATGTTGATTCCAACTGGAAAACCAATTGCCATACTAATATAGAAGCCAACCATTTCCAAGTCATTTTCATTGCCATATTCTTTTTCTTCTTCACTTGTTGAAACAAGAACATTGTTTGAACTTTCATCTCCTGCACACTTGATTTGAAGAGGAGGTCCACATAAAGAAGGATTCCCTTCATAGATGGAGGGATCTTCCAACGTCTGAAGTTGATTACCCATTGGTATTTTTCCTGTTAAATTGTTGAATGACATATTCAAATGTGTCAAGAAATTTAGTGAAGCTAGACTGGCAGGAATTCTGCCACTCAGATTGTTGTATGACAGATCCAATGTCTCTAATTTCTTCATGGCTCCAATATTTTCTGGTATGATACCAACAAAGTTGTTGTTCGATAAGTTTAAGGTATCAAGTTGGACAAGGTTTGTAATCTCCTTTGGAATTTCACCAGTCAATTTATTCCTTGAAAGATCTATTGTCAAAACCGAGTCAAGAATAGTATTGTATTCAGATTCCATTCCTTTCATAACCAATCTTGTATTTTCGTCATAGCTGTAATAGGCTCCACTATTGGTTTGATAAGATCTCAATCCATCTCTGTAGTAATCTTGCACGAAAAATTTCCAGTTATGCAAACAATTTGGGAGCTTCCCATCAAGATGGTTGTTTGATAGATCTAGCACACAGATGGCAGAAAGATTGCACCATTGTCTTGGGATGGTTCCACTGAAACGGTTCGACCGTAGGTTTAACAATTGTAGCTTTGGCACAGCTACTCCTAACCATGACGGTAGGTTTCCGGTTAAGAATATGTTTTCAGAAAGATCAAGGCTTGTGAGGAGTGAACAATTCTGCAAAGAATTGGGAATTTCTCCATGGAGATTGTTGTTGTTCAACATCAATTTGTTGAGGGATGTCAACAAACCTATTGTGGTTGGGATTTTTCCGTGAAGATTGTTATTGGCTAAATCAACAACGAGTAATGATTTGAGTCTACTCCAATCGTCAAAGAGCTTCCCTGAAAGTTGGTTGTGTGACATTGAAAGTACTTCAAGATGATTCATGGTTTTAATGGATGATGGAATTGTACCATGGAGATTATTTTCTGACAAATCTAATCTATACAAATTGGGCATTGGATCATTGATGGTTAAGGGTATAGTGCCCAACAATTGATTATTTCGAAGATCTAAGTGTCTTAGATTAGGATATCTTAAGGGAATAATTGAATCATTTTCACCGCTATCATTTTTCTGATGGGATGTGAATATGTGAGATAGCTTTAGATTGAATAAGTTGTAGGACAAATCCAACCTAATGACTTGAGAAGATACCTTAGAAATCCACTCGTTTGGTAGAGAGCCAAAAATCCCAACATTAGAGAGAACAATCTCAGTTAGTTGAGTTTGAGTTCGAAGCCAAATTGGAAATTGAGAGCGAATGAGACAATTTTCCAAAAAAAGTATCTTGAGACTAAAGGGAGGAATCCAATCGTATGTGATGTTGAAAACAAAAGTTTGTATACTTTTCGTCCACACTTGAAGGATTTTCAATTCTGTCAAGTTCATTAAGTGAACTTCTGTTATAGTTGTATTCCATGAATTCCCATAGTCTTCGTAATAAACCAATTTTGAAAGTTGACCAAAACTCGAAGGTATAGTTCCATTCAAAACATTACTCGAAACATGTAGATGCTCCAATAATGACAAATTACCTATTGAATTTGGAAGTGAACCCCATAAAAAATTATCAGAAAGATTCAAGAATCGAAGATTCTTGAATGTCCCTAGTGAATTTGGTATCTCTCCCACAATTTTATTACCTACCAAATCCAAGGATTCCAACCTATTGCGAGAACAATTTGAGAAACTATCCAAAAAAGTTCCCAGTTTAAAATCATAATGATTGTATGCAAGGTGCAAAAATCGTAACTTACAAAGATTTTGTGAAAAGATTGGAGGGGTGTGATCTCCAATATCATTACTCAAACTATTCCCAGTCAACTCAAGAACTTGGAGATTTTTCAATTTCACAAAATTATGAGGAATTGTTCCTCGAAAAATATTGTTATTTAAATCAAGTGTTGAAAGACTAGTCAAATTCGATAGCCATAAAGGTATGGAAGAATTTATCAAATTACTTGATAAATCAAGAACTCTAAGTGAAGTGAGATTTAAAAAAGCAATTGAAGTATCGAAACTTAAAATACCACAATTACTTAAGTGCAGCTCTGATAAAGAAGAAAGTCCATTGATTGTATGCATCCAATTTCTTTCAACACTAATTAAATTCACACCTCCAAGATTAAGGTACTCAAGAGAAGAAAGACCGGAGAGCCATTGCAAGTTTTTAACATGTAACATGAATCCTCGTTCGTCGGAAAGATCTAGATAACTCAAATTAGTCAAATTTCTAAGATAAATGGGAATCTGTCCACTAAAATTAGCAGAAGAAAGCTTGAGATACCTTAAACTTTTGAGCATCCCAAGGAAATATGGGATTGAAGCACCTTCAAAATCATTGAAACTCAAGTCCAAATAGTACAAATATTTGAGCTCAAGTAGAGAGTGACTTATTTTCCCTGTCAAGCAAGTCTTTTGGAACTCTCGTAAGAAATACTTGAGATCTATCCAAGGTCGTTCTAGATCTCCATACTCAACAAATTGAGAAAGGGCAGAGCCCAATGAATTGTGTAGATCAATTTTAATGACTTTTCCTGAAATGGGATTACAAGTTATGCCATGCCATTGACAGCAATTATGGCCGACCCAAGAAGAAAGTCGAGCAGAAGGATCTAACAAGCCTTGTTTGAAGGAAATCAAGGCTTCCCTCTCAATATCGCTACAATTATTTGAAGTATAAGCACCAACGATGGTAGTTGAGAGCAATATTACACAAAGCAGCCATACAAATGAGACATAACGAGTTATGAAATAATGCTTATCCATATGTTTTTTA

Coding sequence (CDS)

ATGGCAGAAAGATTGCACCATTGTCTTGGGATGGTTCCACTGAAACGGTTCGACCGTAGGTTTAACAATTGTAGCTTTGGCACAGCTACTCCTAACCATGACGGTAGGTTTCCGGTTAAGAATATGTTTTCAGAAAGATCAAGGCTTGTGAGGAGTGAACAATTCTGCAAAGAATTGGGAATTTCTCCATGGAGATTGTTGTTGTTCAACATCAATTTGTTGAGGGATGTCAACAAACCTATTGTGGTTGGGATTTTTCCGTGA

Protein sequence

MAERLHHCLGMVPLKRFDRRFNNCSFGTATPNHDGRFPVKNMFSERSRLVRSEQFCKELGISPWRLLLFNINLLRDVNKPIVVGIFP
Homology
[Close]
BLAST of Cmc12g0333621 vs. NCBI nr
Match: CBI25823.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 64.7 bits (156), Expect = 4.5e-07
Identity = 38/80 (47.50%), Postives = 48/80 (60.00%), Query Frame = 0 

Query: 11 MVPLKRFDRRF---NNCSFGTATPNHDGRFPVKNMFSERSRLVRSEQFCKELGISPWRLL 70
          M P K+FDRR    N+C     +P HDGRFP  N+ S RS+L  S QFC+E GISP  LL
Sbjct: 1  MFPSKKFDRRLRINNDC----ISPIHDGRFP-DNLLSPRSKLSMSLQFCREKGISPESLL 60

Query: 71 LFNINLLRDVNKPIVVGIFP 88
            +I  + +   PI +GI P
Sbjct: 61 PLSIKNISEFRVPIELGISP 75

[Close]
BLAST of Cmc12g0333621 vs. NCBI nr
Match: KAF8035542.1 (hypothetical protein BT93_C1542 [Corymbia citriodora subsp. variegata])

HSP 1 Score: 62.0 bits (149), Expect = 2.9e-06
Identity = 37/85 (43.53%), Postives = 48/85 (56.47%), Query Frame = 0 

Query: 3  ERLHHCLGMVPLKRFDRRFNNCSFGTATPNHDGRFPVKNMFSERSRLVRSEQFCKELGIS 62
          ER H   G+ P+   DRR    + G  +  H G FP +N+FS RSRL +  QFCKE G  
Sbjct: 5  ERWHISEGISPVNELDRRRKISNEGMLSAIHAGIFP-ENLFSPRSRLYKELQFCKEDGSL 64

Query: 63 PWRLLLFNINLLRDVNKPIVVGIFP 88
          P RLLL ++  LR+  K   +GI P
Sbjct: 65 PERLLLLSMKNLREERKLTSLGIEP 88

[Close]
BLAST of Cmc12g0333621 vs. ExPASy TrEMBL
Match: D7T5N9 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0397g00050 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.2e-07
Identity = 38/80 (47.50%), Postives = 48/80 (60.00%), Query Frame = 0 

Query: 11 MVPLKRFDRRF---NNCSFGTATPNHDGRFPVKNMFSERSRLVRSEQFCKELGISPWRLL 70
          M P K+FDRR    N+C     +P HDGRFP  N+ S RS+L  S QFC+E GISP  LL
Sbjct: 1  MFPSKKFDRRLRINNDC----ISPIHDGRFP-DNLLSPRSKLSMSLQFCREKGISPESLL 60

Query: 71 LFNINLLRDVNKPIVVGIFP 88
            +I  + +   PI +GI P
Sbjct: 61 PLSIKNISEFRVPIELGISP 75

[Close]
BLAST of Cmc12g0333621 vs. ExPASy TrEMBL
Match: A0A5C7HDB9 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020105 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.6e-04
Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = 0 

Query: 11 MVPLKRFDRRFNNCSFGTATPNHDGRFPVKNMFSERSRLVRSEQFCKELGISPWRLLLFN 70
          M  LK+FDR+    + G  +P   GRF + ++   RSRL    QFC+E G S  RLLL N
Sbjct: 1  MFSLKKFDRKLKIDNDGMLSPIQAGRF-LDSLLLPRSRLSIEVQFCREGGSSLERLLLEN 60

Query: 71 INLLRDVNKPIVVGIFP 88
          I  + ++ +PI  GI P
Sbjct: 61 IKNMTELREPIDFGIEP 76

The following BLAST results are available for this feature:
BLAST of Cmc12g0333621 vs. NCBI nr
Match NameE-valueIdentityDescription
CBI25823.34.5e-0747.50unnamed protein product, partial [Vitis vinifera][more]
KAF8035542.12.9e-0643.53hypothetical protein BT93_C1542 [Corymbia citriodora subsp. variegata][more]
BLAST of Cmc12g0333621 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc12g0333621 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
D7T5N92.2e-0747.50Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0397g00050 PE=4 SV=... [more]
A0A5C7HDB98.6e-0441.56Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020105 PE=4 SV=1[more]
BLAST of Cmc12g0333621 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0333621.1Cmc12g0333621.1mRNA