Cmc12g0332751 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0332751
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr12: 22917490 .. 22918464 (+)
RNA-Seq Expression	Cmc12g0332751
Synteny	Cmc12g0332751

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTTTCTCTCTCATTCTCTTCATGAATATAAAAGGAATAGCCAATAGCCATTGTGAAATGAATCAATGTGTTTGATTCTAACTTAACTTCCTACCATTTTTGTTTAGGAGTTCCTCTGTTTTTGAAAGGCTCTGTTTTGGCAGAGGAAAAGCATGGGTCTTTTAATGACAGTAAGGAAAAATGGTGGTTATTCAAGGATGGAGAAGGAAGACCCAGATGAGAAAAAGCATAGACAAGCTCAGTTCTTGATTTACAAGATAATGGAGCAAGCAAGTAATGGCAGTAAGAGAAGACCTTCATGTCTAAGAATCAGAATAAGAAAGTTTAAGTTAAGGATTGGAAGAAGGTTGAAGAAGATGAAGAAGACAATGGCAATGAGTTTTTCAACAGCAAGAATTGGAATTTGCAGCCAATTGGGACAGCTTAGAAGTTGTAAAAGTTTGTTTGGAAAAGCAAAGGTGGAAACTTTGAACTTTCCTACTGCTTTGGTTGCTTGAGTTGATTAGGATTTTAGTTCTTTATTCTTGTATTCTTCTCTTTGTTTTGTGAAGTTTCTATGTTTGAAGAGAGAAGTTGGATGTTGGGATTTTTGTTTCCATGGATGGAGAGTTGTCTTCTGATGGAAAAAGGAAATGAAAAAGAAGGAAAATGAAGGAAAAAGATTTAGTAAAGCAGTTTTTCTCTTTTCTGATTAATGGTGCTTCTCAGAAGTAGTTTTGGAGTTACTTTTGAAGATTTCTGTTTTCTTTTTGGTACTCTCTAGTTAGATTATTAAAAATACCTGCAAATTTTGAATAGATTTTGAAAATTTTTATATGAACTCTTGAACTTTGAAATTGATCCATAAAAATACCTTTGAACTGAATTGAAATTTTTTTGCCCAGTTGAACTCGGTGGTTTTACTTCAACTAAAATGTAGTCGAAATCGATTACAAATTTAATTTTTAAACGTCAATGTTGTAAATAGTATCAT

mRNA sequence

TTCCTTTCTCTCTCATTCTCTTCATGAATATAAAAGGAATAGCCAATAGCCATTGTGAAATGAATCAATGTGTTTGATTCTAACTTAACTTCCTACCATTTTTGTTTAGGAGTTCCTCTGTTTTTGAAAGGCTCTGTTTTGGCAGAGGAAAAGCATGGGTCTTTTAATGACAGTAAGGAAAAATGGTGGTTATTCAAGGATGGAGAAGGAAGACCCAGATGAGAAAAAGCATAGACAAGCTCAGTTCTTGATTTACAAGATAATGGAGCAAGCAAGTAATGGCAGTAAGAGAAGACCTTCATGTCTAAGAATCAGAATAAGAAAGTTTAAGTTAAGGATTGGAAGAAGGTTGAAGAAGATGAAGAAGACAATGGCAATGAGTTTTTCAACAGCAAGAATTGGAATTTGCAGCCAATTGGGACAGCTTAGAAGTTGTAAAAGTTTGTTTGGAAAAGCAAAGAAGTTGGATGTTGGGATTTTTGTTTCCATGGATGGAGAGTTGTCTTCTGATGGAAAAAGGAAATGAAAAAGAAGGAAAATGAAGGAAAAAGATTTAGTAAAGCAGTTTTTCTCTTTTCTGATTAATGGTGCTTCTCAGAAGTAGTTTTGGAGTTACTTTTGAAGATTTCTGTTTTCTTTTTGGTACTCTCTAGTTAGATTATTAAAAATACCTGCAAATTTTGAATAGATTTTGAAAATTTTTATATGAACTCTTGAACTTTGAAATTGATCCATAAAAATACCTTTGAACTGAATTGAAATTTTTTTGCCCAGTTGAACTCGGTGGTTTTACTTCAACTAAAATGTAGTCGAAATCGATTACAAATTTAATTTTTAAACGTCAATGTTGTAAATAGTATCAT

Coding sequence (CDS)

ATGGGTCTTTTAATGACAGTAAGGAAAAATGGTGGTTATTCAAGGATGGAGAAGGAAGACCCAGATGAGAAAAAGCATAGACAAGCTCAGTTCTTGATTTACAAGATAATGGAGCAAGCAAGTAATGGCAGTAAGAGAAGACCTTCATGTCTAAGAATCAGAATAAGAAAGTTTAAGTTAAGGATTGGAAGAAGGTTGAAGAAGATGAAGAAGACAATGGCAATGAGTTTTTCAACAGCAAGAATTGGAATTTGCAGCCAATTGGGACAGCTTAGAAGTTGTAAAAGTTTGTTTGGAAAAGCAAAGAAGTTGGATGTTGGGATTTTTGTTTCCATGGATGGAGAGTTGTCTTCTGATGGAAAAAGGAAATGA

Protein sequence

MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKLRIGRRLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAKKLDVGIFVSMDGELSSDGKRK

Homology

[Close]

BLAST of Cmc12g0332751 vs. NCBI nr
Match: KGN64527.1 (hypothetical protein Csa_013452 [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 3.2e-43
Identity = 93/102 (91.18%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           M +LMTVR+NGGYS+MEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL
Sbjct: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60

Query: 61  RIGRRLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAK 103
           R+GRR KKMKKTMAMSFSTARIGIC+Q GQLRSCKSLFGK K
Sbjct: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGKTK 102

[Close]

BLAST of Cmc12g0332751 vs. NCBI nr
Match: XP_022140046.1 (uncharacterized protein LOC111010796 [Momordica charantia])

HSP 1 Score: 162.5 bits (410), Expect = 2.2e-36
Identity = 80/112 (71.43%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           M +++T RK  GYSRMEKEDP+EKKHR+AQFLIYKIMEQA++GS+RRP+CLRIRIRKFKL
Sbjct: 1   MSVILT-RKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKL 60

Query: 61  RIGRRLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAKKLDVGIFVSM 113
           RIGRRLKK++K+M+ S STARIGIC Q+GQLR+CKSLFG+ +K++   F S+
Sbjct: 61  RIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPSL 111

[Close]

BLAST of Cmc12g0332751 vs. NCBI nr
Match: KAG6584084.1 (hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 158.7 bits (400), Expect = 3.2e-35
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 5   MTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKLRIGR 64
           +  R+  GYSRMEKEDP+EKKHRQAQFLIYKIMEQA++GS+RR SCLRIRIRKFKLRIGR
Sbjct: 4   LVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGR 63

Query: 65  RLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAKK 104
           RLKK+KKTM+M   TARIGIC Q GQLR+CKSLFG+AK+
Sbjct: 64  RLKKLKKTMSMGICTARIGICKQFGQLRTCKSLFGRAKE 102

[Close]

BLAST of Cmc12g0332751 vs. NCBI nr
Match: KAG7019685.1 (hypothetical protein SDJN02_18648, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 156.0 bits (393), Expect = 2.1e-34
Identity = 77/99 (77.78%), Postives = 88/99 (88.89%), Query Frame = 0


Query: 5   MTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKLRIGR 64
           +  R+  GYSRMEKEDP+EKKHRQAQFLIYKIMEQA++GS+RR SCLRIRIRKFKLRIGR
Sbjct: 4   LVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLRIGR 63

Query: 65  RLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAKK 104
           RLKK+KKTM+M   TAR GIC Q GQLR+CKSLFG+AK+
Sbjct: 64  RLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRAKE 102

[Close]

BLAST of Cmc12g0332751 vs. NCBI nr
Match: XP_023001322.1 (uncharacterized protein LOC111495486 [Cucurbita maxima])

HSP 1 Score: 155.2 bits (391), Expect = 3.6e-34
Identity = 76/99 (76.77%), Postives = 88/99 (88.89%), Query Frame = 0


Query: 5   MTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKLRIGR 64
           +  R+  GYSRMEKEDP+EKKHRQAQFLIYKIMEQA++G++RR SCLRIRIRKFKLRIGR
Sbjct: 4   LVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGTRRRSSCLRIRIRKFKLRIGR 63

Query: 65  RLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAKK 104
           RLKK+KKTM+M F TAR GIC Q GQLR+CKSLFG+ K+
Sbjct: 64  RLKKLKKTMSMGFCTARNGICKQFGQLRTCKSLFGRPKE 102

[Close]

BLAST of Cmc12g0332751 vs. ExPASy TrEMBL
Match: A0A0A0LUT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063510 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-43
Identity = 93/102 (91.18%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           M +LMTVR+NGGYS+MEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL
Sbjct: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60

Query: 61  RIGRRLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAK 103
           R+GRR KKMKKTMAMSFSTARIGIC+Q GQLRSCKSLFGK K
Sbjct: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGKTK 102

[Close]

BLAST of Cmc12g0332751 vs. ExPASy TrEMBL
Match: A0A6J1CEK3 (uncharacterized protein LOC111010796 OS=Momordica charantia OX=3673 GN=LOC111010796 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.1e-36
Identity = 80/112 (71.43%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           M +++T RK  GYSRMEKEDP+EKKHR+AQFLIYKIMEQA++GS+RRP+CLRIRIRKFKL
Sbjct: 1   MSVILT-RKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKL 60

Query: 61  RIGRRLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAKKLDVGIFVSM 113
           RIGRRLKK++K+M+ S STARIGIC Q+GQLR+CKSLFG+ +K++   F S+
Sbjct: 61  RIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPSL 111

[Close]

BLAST of Cmc12g0332751 vs. ExPASy TrEMBL
Match: A0A6J1KG77 (uncharacterized protein LOC111495486 OS=Cucurbita maxima OX=3661 GN=LOC111495486 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.7e-34
Identity = 76/99 (76.77%), Postives = 88/99 (88.89%), Query Frame = 0


Query: 5   MTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKLRIGR 64
           +  R+  GYSRMEKEDP+EKKHRQAQFLIYKIMEQA++G++RR SCLRIRIRKFKLRIGR
Sbjct: 4   LVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGTRRRSSCLRIRIRKFKLRIGR 63

Query: 65  RLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAKK 104
           RLKK+KKTM+M F TAR GIC Q GQLR+CKSLFG+ K+
Sbjct: 64  RLKKLKKTMSMGFCTARNGICKQFGQLRTCKSLFGRPKE 102

[Close]

BLAST of Cmc12g0332751 vs. ExPASy TrEMBL
Match: A0A5A7UTN2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005820 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.2e-22
Identity = 65/102 (63.73%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 1   MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNG+                
Sbjct: 1   MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGT---------------- 60

Query: 61  RIGRRLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAK 103
                               RIGICSQLGQLRSCKSLFGKAK
Sbjct: 61  --------------------RIGICSQLGQLRSCKSLFGKAK 66

[Close]

BLAST of Cmc12g0332751 vs. ExPASy TrEMBL
Match: A0A540M3N5 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_021032 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.4e-20
Identity = 57/100 (57.00%), Postives = 80/100 (80.00%), Query Frame = 0


Query: 3   LLMTVRKN-GGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKLR 62
           + MT+RK+ G YS+M+KEDP+E  HR+AQFLIYK+M+Q     +RRPS LRIR+RK KL+
Sbjct: 1   MAMTIRKSYGAYSKMDKEDPEEVNHRRAQFLIYKVMQQVE--MRRRPSNLRIRVRKLKLK 60

Query: 63  IGRRLKKMKKTMAMSFSTARIGICSQL-GQLRSCKSLFGK 101
           IGRRLKK++K+M +S S AR+ +  Q+  QL++CK+LFG+
Sbjct: 61  IGRRLKKLRKSMLLSISAARVCVYKQVFNQLKTCKTLFGR 98

[Close]

BLAST of Cmc12g0332751 vs. TAIR 10
Match: AT1G11655.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07
Identity = 33/88 (37.50%), Postives = 58/88 (65.91%), Query Frame = 0


Query: 13 YSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRP--SCLRIRIRKFKLRIGRRLKKMK 72
          YS+M+KEDP+E   R+A+FLIYK +++A   S+R P  S +R+++   K++IG+RL K++
Sbjct: 10 YSKMDKEDPEEVLSRRAKFLIYKTLQEADLISRRDPHSSFIRLKLYLLKVKIGKRLAKLR 69

Query: 73 KTMAMSFSTARIGICSQLGQLRSCKSLF 99
          +++  +     I   S  G +R+ K +F
Sbjct: 70 RSVVSAVRFGGIRKHSHNG-VRALKKMF 96

[Close]

BLAST of Cmc12g0332751 vs. TAIR 10
Match: AT4G04745.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 32 Blast hits to 32 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 1.8e-07
Identity = 30/67 (44.78%), Postives = 48/67 (71.64%), Query Frame = 0


Query: 13  YSRMEKEDPDEKKHRQAQFLIYKIMEQASNGS-----KRRPS--CLRIRIRKFKLRIGRR 72
           Y++MEKEDP E  HR+AQFLI K++E+A + +     +RR S   + IR+   ++RIG++
Sbjct: 37  YTKMEKEDPQELIHRRAQFLIQKVLERADSKTRQHQQRRRSSGPLIMIRVVGIRMRIGKK 96

[Close]

BLAST of Cmc12g0332751 vs. TAIR 10
Match: AT4G21902.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04745.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 27/79 (34.18%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 5  MTVRKN-GGYSRMEKEDPDEKKHRQAQFLIYKIMEQAS----NGSKRRPSCLRI---RIR 64
          M + KN   Y+++EKED +E  HR+AQFLI+KI+++A        ++R + +++   R+ 
Sbjct: 1  MAMMKNPNQYTKIEKEDLNEIIHRRAQFLIHKILQRADIETLRQQQKRNTTIKLFSFRVV 60

Query: 65 KFKLRIGRRLKKMKKTMAM 76
            +++IG++L+K++K+  M
Sbjct: 61 GIRMKIGKKLRKLRKSCVM 79

The following BLAST results are available for this feature:

BLAST of Cmc12g0332751 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64527.1	3.2e-43	91.18	hypothetical protein Csa_013452 [Cucumis sativus]	[more]
XP_022140046.1	2.2e-36	71.43	uncharacterized protein LOC111010796 [Momordica charantia]	[more]
KAG6584084.1	3.2e-35	78.79	hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7019685.1	2.1e-34	77.78	hypothetical protein SDJN02_18648, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023001322.1	3.6e-34	76.77	uncharacterized protein LOC111495486 [Cucurbita maxima]	[more]

BLAST of Cmc12g0332751 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc12g0332751 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUT4	1.6e-43	91.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063510 PE=4 SV=1	[more]
A0A6J1CEK3	1.1e-36	71.43	uncharacterized protein LOC111010796 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1KG77	1.7e-34	76.77	uncharacterized protein LOC111495486 OS=Cucurbita maxima OX=3661 GN=LOC111495486...	[more]
A0A5A7UTN2	1.2e-22	63.73	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A540M3N5	1.4e-20	57.00	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_021032 PE=4 SV=1	[more]

BLAST of Cmc12g0332751 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11655.1	1.0e-07	37.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G04745.1	1.8e-07	44.78	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G21902.1	1.1e-04	34.18	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR35687	OS07G0516700 PROTEIN	coord: 5..102
None	No IPR available	PANTHER	PTHR35687:SF1	OS07G0516700 PROTEIN	coord: 5..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0332751.1	Cmc12g0332751.1	mRNA