Cmc12g0332011 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0332011
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr12: 22500732 .. 22504676 (+)
RNA-Seq Expression	Cmc12g0332011
Synteny	Cmc12g0332011

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCCATAACAAGTTCTAGTTTCACTTCAATTTCTCCATTGATATTTGATGGAGACAACTACCAAGTTTGGGCAGTTCGTATGGAAGCTTATATGGAAGCTTTGGATATTTGGGAAGCAGTGGAAGAGGATTATGAAATTCCTGCTCTTCCAGACAATCCTACCATGGCACAAATCAAAGCGCAAAAGGAGAAGAAGACAAAGAAATCCAAGGCAAAGGCATGTCTGTTTGCTGCAGTCTCATCTACTATCTTCACTAGAATTATGACTCTGAGATCAGCATATGAGATATGGAATTATCTCAAGTCAGAATATGAGGGAGATGAAAGAATCAAAGGAATGCGTGTGCTAAACTTGATTCGAGAATTCGAGTTGCAGAAGATGAAGGAAACAGAATCAATTAAAGAGTATTCTGTTAGGTTATTGGACATTGCAAACCAAATCAGATTACTTGGTTCTGTGTTCAAGGACTCAAGAATTGTAGAAAAAATTCTTGTATCAGTGCCTGAAAAATTTGAGGCATCTATTTCTGCCTTAGAAAATACCAAAGATTTGACTCAAATCACTCTTGCAGAGATACTCAATGCTTTGCAAGCGCAGGAACAAAGAAGAGCCATGAGGCAAGAAGGTGCTGTTGAAGGAGCCTTGCCAGCGAAGCATCATGAGAACGTTAGGAACAATAAGAAGAAGAAGTTTTTCAAGAAGAATCAAATTTCTACTAGAGAATCTTCAACTTACAACAAAGCAGGAGTCAAGAAGGGATCCTATCCTCCCTGTTCACATTGCAATAAACAGGGTCATCCTCCTTTTAAATGCTGGAGGAGACCAAACGCCAAGTGCACCAAATGTAACCAAATGGGGCATGAAGCTGTAATTTGCAGGAACAATAATCAACAACAAGGTGTAGAGGCCAAAATTGCTTATCAGGAGGAGGAGGAGGAGGATCAATTGTTTGTGGCAACATGCTTCGTGGGTGGTGAGTCAAATGAAAGCTGGCTGATTGACAGTGGATGTACCAACCATATGACTCATGACAAGGAGTTGTTTAAAGATCTGAAGCCAACAAATATCACCAAAGTCAGAATTGGCAATGGAGACTACATCTCAGTCAAAGGAAAGGGGACTATTGCGATTGCCAGTTGTAAAGGTACAAAGCATATACAAGATGTTCTTTTTGTACCTGACATTAACCAAAATTTGTTGAGTGTGGGTCAACTTATTGAAAAAGGTTTTAAAGTTACTTTTGAAAATGAATATTGCTTGATTAAGGATGCAGCAAATCAAGATATTTTCAAAGTAAAAATGAAAGGAAAAAGTTTTTCACTTAATCCTTTAGAGGAGAAGCAATCTGTTTTTGCTCTCAAAGAAGATGAAACACAGCTTTGGCACAAAAGAGTCGGTCACTATCATCATCAAGGGCTGCTACAACTAACGGAGTTGGCACTTGATTTTCCCAAGCTTAGTGAAGAAATCTCAAGCTGCAAAGCGTGTCATTTTGGAAAGCAAAATAGGAAGTCATTTCCCAAGTCATCTTGGAGAGCCACTCAAAAATTGCAGCTCATTCACACAGATGTTGCAGGTCCTCAGAGAACACCTTCTTTAAAAGGTAGTCTCTATTATATTGCTTTTATTGATGACTTCACCAGAATGTGCTGGATTTTTTTCTTGAAGTTTAAATCAGAGGTTGCTCATGTCTTTTGGAAGTTCAAGGCAAGAGTTGAAAATGAAAGTGGTTGCAAAATTCAAATGGTAAGGTCTGACAATGGGAAGGAGTATGTTTCGGCAGAATTTGACAAGTTTTGTGAAGATTCAGGCATAAAACATCAACTTACAGCTCCTTACACTCCTCAACAAAATGGAGTTAGTGAGAGGAGAAATAGATACATCATGGAGATGACAAGATGCATGCTGCATGAAAAGAGTTTGCCAAAGAAGTTTTGGGCAGAGGCAGCAAATACAGCTGTATTTCTTCAAAATAGGCTTCCCACAAAAGCATTGAAGGAAAAGACACCATTTGAGGCATGGTATGGGTACAAACCATCATTGAAATTTCTCAAAGTATTTGGTTGTTTGTGTTTCACTCATGTTCCACAGAGCAAGCGTGACAAACTTGATAGGAGAGCTTCACCGGGTGTCTTTATAGGCTATAGTTCTATCAGCAAAGCCTATAAAATTTTCCAACCACAAACTGGAAAGATTGTCGTGAGCAGGGATGTTCACTTCGAGGAAGATGAAGAGTGGAACTTTGATGATGCAGAGAAGAAAGGTCAGACCTTGGAAAAGATGAAATTCAAGTTTTTTGATTCAAGCATTGAAGAGGAAGATGACAGGCAGAATGAAATAGTAGATGATGCTTCCGTGAGAGGAACAAGGTTGCTTTCTGATATTTATGAAAGGTGCAATGTTGCTGTGTGTGAACCTGCAAACTATGCAGAAGCAAAGAAAGATCAAAGGTGGATAGCTGCAATGGAGGAGGAGTTGTCAATGATAGAGAAGAACAAAACTTGGATCCTTGTTGACAGACCTCAAGATAGGAAGGTAATTGGAGTTAAATGGGTGTTTAGAACCAAGCTTAATGCTGATGGCTCGATTAACAAGCACAAAGCCAGGCTTGTGGTTAAAGGGTATGCTCAAATCTTTGGTGTTGATTACTCTGATACTTTTGCTCCTGTTGCTAGAATGGACACAATCAGGTTACTATTTGCAATAGCTGCACAAAAGGGGTGGAAATTGTATCAGTTGGATGTCAAATCAGCTTTTTTGAATGGTGTCTTACAAGAAGAAATTTATGTTGAGCAGCCCGAAGGATGTGAGAAGCAAGGTGAAAGAAATAAAGTCTATCTTCTCAAGAAGGCTCTTTATGGTTTAAAACAAGCTCCAAGAGCTTGGTATAGCAAAATTGATGAACATTTACTGAGCTTGGGATTTTTGAAAAGTCTATCAGAATCAACCTTATATGTTAAGCACAATGGTACTAACATTCTTATTGTTTCACTGTATGTTGATGACCTACTGGTTACAGGAAACAATGCAGATCATATTCAAAATTTCAAATGGGAGATGATGAAGATGTTTGAAATGACAGATCTCGGGCTCATGTCCTACTTCCTTGGCATAGAGATCAAGCAAGGGCAAGGTGAAGTTTTCATTTGCCAGAAAAAATATGCAAAGGAAATACTAAAGAAGTTTAAGATGGATGAGTGTAAGGCTGTAAGCACTCCAATGAATCAAAAAGAGAAGTTGTGCAAAGAAGATGGTGCTGACAAAGTTGATGAAGGATATTTTAGGAGTTTAATTGGTTGCTTGATGTATCTCACAGCAACAAGACCTGATATTTTGAATGCTGTGAGTATTTTGTCTCGTTTCATGCATTGTGCAAGTGAATTACATCTTAAGGCAGCAAAAAGAGTGATACGATATGTCAAAGGCACAAGTGATTTTGGTGTTAAGTTCACTAGGGGCAAGGAGTTCAAACTGATTGGTTTTTCTGATAGTGATTGGGGAGGTTCCATTGATGATATGAGAAGCACTTTAGGTTACTGTTTTACTCTTAGCTCTGGTGTTTTCTCTTGGAGCTCGAAAAAGCAAGAGATTGTAGCCCAATCCACTGCTGAAGCAGAATTTATTGCTGCAACAGCTACTGCCAATCAAGCTTTATGGCTGAGGAAAATTTTACTTGACCTTGATCTGGAGCAGAAGAAAAGCACGGAGATTCTTGTTGATAACAAAGCGGCTATTGCTATTTCTCATAATCCTGTGTTTTATAAGAAGACTAAACATTTTAACATCAAGTTATTTTTTTTAAGGGAAGTGCAGAAAAGTGGAGAGGTGATTCTTGTCTACTGCAAAACAGAAGATCAAGTTGCAGACATATTAACTAAACCGTTGCCTACTTGCAAGTTCGAGTTTCTAAGGTCAAAACTTGGTGTTTGCAACTCCTAA

mRNA sequence

ATGGACGCCATAACAAGTTCTAGTTTCACTTCAATTTCTCCATTGATATTTGATGGAGACAACTACCAAGTTTGGGCAGTTCGTATGGAAGCTTATATGGAAGCTTTGGATATTTGGGAAGCAGTGGAAGAGGATTATGAAATTCCTGCTCTTCCAGACAATCCTACCATGGCACAAATCAAAGCGCAAAAGGAGAAGAAGACAAAGAAATCCAAGGCAAAGGCATGTCTGTTTGCTGCAGTCTCATCTACTATCTTCACTAGAATTATGACTCTGAGATCAGCATATGAGATATGGAATTATCTCAAGTCAGAATATGAGGGAGATGAAAGAATCAAAGGAATGCGTGTGCTAAACTTGATTCGAGAATTCGAGTTGCAGAAGATGAAGGAAACAGAATCAATTAAAGAGTATTCTGTTAGGTTATTGGACATTGCAAACCAAATCAGATTACTTGGTTCTGTGTTCAAGGACTCAAGAATTGTAGAAAAAATTCTTGTATCAGTGCCTGAAAAATTTGAGGCATCTATTTCTGCCTTAGAAAATACCAAAGATTTGACTCAAATCACTCTTGCAGAGATACTCAATGCTTTGCAAGCGCAGGAACAAAGAAGAGCCATGAGGCAAGAAGGTGCTGTTGAAGGAGCCTTGCCAGCGAAGCATCATGAGAACGTTAGGAACAATAAGAAGAAGAAGTTTTTCAAGAAGAATCAAATTTCTACTAGAGAATCTTCAACTTACAACAAAGCAGGAGTCAAGAAGGGATCCTATCCTCCCTGTTCACATTGCAATAAACAGGGTCATCCTCCTTTTAAATGCTGGAGGAGACCAAACGCCAAGTGCACCAAATGTAACCAAATGGGGCATGAAGCTGTAATTTGCAGGAACAATAATCAACAACAAGGTGTAGAGGCCAAAATTGCTTATCAGGAGGAGGAGGAGGAGGATCAATTGTTTGTGGCAACATGCTTCGTGGGTGGTGAGTCAAATGAAAGCTGGCTGATTGACAGTGGATGTACCAACCATATGACTCATGACAAGGAGTTGTTTAAAGATCTGAAGCCAACAAATATCACCAAAGTCAGAATTGGCAATGGAGACTACATCTCAGTCAAAGGAAAGGGGACTATTGCGATTGCCAGTTGTAAAGGTACAAAGCATATACAAGATGTTCTTTTTGTACCTGACATTAACCAAAATTTGTTGAGTGTGGGTCAACTTATTGAAAAAGGTTTTAAAGTTACTTTTGAAAATGAATATTGCTTGATTAAGGATGCAGCAAATCAAGATATTTTCAAAGTAAAAATGAAAGGAAAAAGTTTTTCACTTAATCCTTTAGAGGAGAAGCAATCTGTTTTTGCTCTCAAAGAAGATGAAACACAGCTTTGGCACAAAAGAGTCGGTCACTATCATCATCAAGGGCTGCTACAACTAACGGAGTTGGCACTTGATTTTCCCAAGCTTAGTGAAGAAATCTCAAGCTGCAAAGCGTGTCATTTTGGAAAGCAAAATAGGAAGTCATTTCCCAAGTCATCTTGGAGAGCCACTCAAAAATTGCAGCTCATTCACACAGATGTTGCAGGTCCTCAGAGAACACCTTCTTTAAAAGGTAGTCTCTATTATATTGCTTTTATTGATGACTTCACCAGAATGTGCTGGATTTTTTTCTTGAAGTTTAAATCAGAGGTTGCTCATGTCTTTTGGAAGTTCAAGGCAAGAGTTGAAAATGAAAGTGGTTGCAAAATTCAAATGGTAAGGTCTGACAATGGGAAGGAGTATGTTTCGGCAGAATTTGACAAGTTTTGTGAAGATTCAGGCATAAAACATCAACTTACAGCTCCTTACACTCCTCAACAAAATGGAGTTAGTGAGAGGAGAAATAGATACATCATGGAGATGACAAGATGCATGCTGCATGAAAAGAGTTTGCCAAAGAAGTTTTGGGCAGAGGCAGCAAATACAGCTGTATTTCTTCAAAATAGGCTTCCCACAAAAGCATTGAAGGAAAAGACACCATTTGAGGCATGGTATGGGTACAAACCATCATTGAAATTTCTCAAAGTATTTGGTTGTTTGTGTTTCACTCATGTTCCACAGAGCAAGCGTGACAAACTTGATAGGAGAGCTTCACCGGGTGTCTTTATAGGCTATAGTTCTATCAGCAAAGCCTATAAAATTTTCCAACCACAAACTGGAAAGATTGTCGTGAGCAGGGATGTTCACTTCGAGGAAGATGAAGAGTGGAACTTTGATGATGCAGAGAAGAAAGGTCAGACCTTGGAAAAGATGAAATTCAAGTTTTTTGATTCAAGCATTGAAGAGGAAGATGACAGGCAGAATGAAATAGTAGATGATGCTTCCGTGAGAGGAACAAGGTTGCTTTCTGATATTTATGAAAGGTGCAATGTTGCTGTGTGTGAACCTGCAAACTATGCAGAAGCAAAGAAAGATCAAAGGTGGATAGCTGCAATGGAGGAGGAGTTGTCAATGATAGAGAAGAACAAAACTTGGATCCTTGTTGACAGACCTCAAGATAGGAAGGTAATTGGAGTTAAATGGGTGTTTAGAACCAAGCTTAATGCTGATGGCTCGATTAACAAGCACAAAGCCAGGCTTGTGGTTAAAGGGTATGCTCAAATCTTTGGTGTTGATTACTCTGATACTTTTGCTCCTGTTGCTAGAATGGACACAATCAGGTTACTATTTGCAATAGCTGCACAAAAGGGGTGGAAATTGTATCAGTTGGATGTCAAATCAGCTTTTTTGAATGGTGTCTTACAAGAAGAAATTTATGTTGAGCAGCCCGAAGGATGTGAGAAGCAAGGTGAAAGAAATAAAGTCTATCTTCTCAAGAAGGCTCTTTATGGTTTAAAACAAGCTCCAAGAGCTTGGTATAGCAAAATTGATGAACATTTACTGAGCTTGGGATTTTTGAAAAGTCTATCAGAATCAACCTTATATGTTAAGCACAATGGTACTAACATTCTTATTGTTTCACTGTATGTTGATGACCTACTGGTTACAGGAAACAATGCAGATCATATTCAAAATTTCAAATGGGAGATGATGAAGATGTTTGAAATGACAGATCTCGGGCTCATGTCCTACTTCCTTGGCATAGAGATCAAGCAAGGGCAAGGTGAAGTTTTCATTTGCCAGAAAAAATATGCAAAGGAAATACTAAAGAAGTTTAAGATGGATGAGTGTAAGGCTGTAAGCACTCCAATGAATCAAAAAGAGAAGTTGTGCAAAGAAGATGGTGCTGACAAAGTTGATGAAGGATATTTTAGGAGTTTAATTGGTTGCTTGATGTATCTCACAGCAACAAGACCTGATATTTTGAATGCTGTGAGTATTTTGTCTCGTTTCATGCATTGTGCAAGTGAATTACATCTTAAGGCAGCAAAAAGAGTGATACGATATGTCAAAGGCACAAGTGATTTTGGTGTTAAGTTCACTAGGGGCAAGGAGTTCAAACTGATTGGTTTTTCTGATAGTGATTGGGGAGGTTCCATTGATGATATGAGAAGCACTTTAGGTTACTGTTTTACTCTTAGCTCTGGTGTTTTCTCTTGGAGCTCGAAAAAGCAAGAGATTGTAGCCCAATCCACTGCTGAAGCAGAATTTATTGCTGCAACAGCTACTGCCAATCAAGCTTTATGGCTGAGGAAAATTTTACTTGACCTTGATCTGGAGCAGAAGAAAAGCACGGAGATTCTTGTTGATAACAAAGCGGCTATTGCTATTTCTCATAATCCTGTGTTTTATAAGAAGACTAAACATTTTAACATCAAGTTATTTTTTTTAAGGGAAGTGCAGAAAAGTGGAGAGGTGATTCTTGTCTACTGCAAAACAGAAGATCAAGTTGCAGACATATTAACTAAACCGTTGCCTACTTGCAAGTTCGAGTTTCTAAGGTCAAAACTTGGTGTTTGCAACTCCTAA

Coding sequence (CDS)

ATGGACGCCATAACAAGTTCTAGTTTCACTTCAATTTCTCCATTGATATTTGATGGAGACAACTACCAAGTTTGGGCAGTTCGTATGGAAGCTTATATGGAAGCTTTGGATATTTGGGAAGCAGTGGAAGAGGATTATGAAATTCCTGCTCTTCCAGACAATCCTACCATGGCACAAATCAAAGCGCAAAAGGAGAAGAAGACAAAGAAATCCAAGGCAAAGGCATGTCTGTTTGCTGCAGTCTCATCTACTATCTTCACTAGAATTATGACTCTGAGATCAGCATATGAGATATGGAATTATCTCAAGTCAGAATATGAGGGAGATGAAAGAATCAAAGGAATGCGTGTGCTAAACTTGATTCGAGAATTCGAGTTGCAGAAGATGAAGGAAACAGAATCAATTAAAGAGTATTCTGTTAGGTTATTGGACATTGCAAACCAAATCAGATTACTTGGTTCTGTGTTCAAGGACTCAAGAATTGTAGAAAAAATTCTTGTATCAGTGCCTGAAAAATTTGAGGCATCTATTTCTGCCTTAGAAAATACCAAAGATTTGACTCAAATCACTCTTGCAGAGATACTCAATGCTTTGCAAGCGCAGGAACAAAGAAGAGCCATGAGGCAAGAAGGTGCTGTTGAAGGAGCCTTGCCAGCGAAGCATCATGAGAACGTTAGGAACAATAAGAAGAAGAAGTTTTTCAAGAAGAATCAAATTTCTACTAGAGAATCTTCAACTTACAACAAAGCAGGAGTCAAGAAGGGATCCTATCCTCCCTGTTCACATTGCAATAAACAGGGTCATCCTCCTTTTAAATGCTGGAGGAGACCAAACGCCAAGTGCACCAAATGTAACCAAATGGGGCATGAAGCTGTAATTTGCAGGAACAATAATCAACAACAAGGTGTAGAGGCCAAAATTGCTTATCAGGAGGAGGAGGAGGAGGATCAATTGTTTGTGGCAACATGCTTCGTGGGTGGTGAGTCAAATGAAAGCTGGCTGATTGACAGTGGATGTACCAACCATATGACTCATGACAAGGAGTTGTTTAAAGATCTGAAGCCAACAAATATCACCAAAGTCAGAATTGGCAATGGAGACTACATCTCAGTCAAAGGAAAGGGGACTATTGCGATTGCCAGTTGTAAAGGTACAAAGCATATACAAGATGTTCTTTTTGTACCTGACATTAACCAAAATTTGTTGAGTGTGGGTCAACTTATTGAAAAAGGTTTTAAAGTTACTTTTGAAAATGAATATTGCTTGATTAAGGATGCAGCAAATCAAGATATTTTCAAAGTAAAAATGAAAGGAAAAAGTTTTTCACTTAATCCTTTAGAGGAGAAGCAATCTGTTTTTGCTCTCAAAGAAGATGAAACACAGCTTTGGCACAAAAGAGTCGGTCACTATCATCATCAAGGGCTGCTACAACTAACGGAGTTGGCACTTGATTTTCCCAAGCTTAGTGAAGAAATCTCAAGCTGCAAAGCGTGTCATTTTGGAAAGCAAAATAGGAAGTCATTTCCCAAGTCATCTTGGAGAGCCACTCAAAAATTGCAGCTCATTCACACAGATGTTGCAGGTCCTCAGAGAACACCTTCTTTAAAAGGTAGTCTCTATTATATTGCTTTTATTGATGACTTCACCAGAATGTGCTGGATTTTTTTCTTGAAGTTTAAATCAGAGGTTGCTCATGTCTTTTGGAAGTTCAAGGCAAGAGTTGAAAATGAAAGTGGTTGCAAAATTCAAATGGTAAGGTCTGACAATGGGAAGGAGTATGTTTCGGCAGAATTTGACAAGTTTTGTGAAGATTCAGGCATAAAACATCAACTTACAGCTCCTTACACTCCTCAACAAAATGGAGTTAGTGAGAGGAGAAATAGATACATCATGGAGATGACAAGATGCATGCTGCATGAAAAGAGTTTGCCAAAGAAGTTTTGGGCAGAGGCAGCAAATACAGCTGTATTTCTTCAAAATAGGCTTCCCACAAAAGCATTGAAGGAAAAGACACCATTTGAGGCATGGTATGGGTACAAACCATCATTGAAATTTCTCAAAGTATTTGGTTGTTTGTGTTTCACTCATGTTCCACAGAGCAAGCGTGACAAACTTGATAGGAGAGCTTCACCGGGTGTCTTTATAGGCTATAGTTCTATCAGCAAAGCCTATAAAATTTTCCAACCACAAACTGGAAAGATTGTCGTGAGCAGGGATGTTCACTTCGAGGAAGATGAAGAGTGGAACTTTGATGATGCAGAGAAGAAAGGTCAGACCTTGGAAAAGATGAAATTCAAGTTTTTTGATTCAAGCATTGAAGAGGAAGATGACAGGCAGAATGAAATAGTAGATGATGCTTCCGTGAGAGGAACAAGGTTGCTTTCTGATATTTATGAAAGGTGCAATGTTGCTGTGTGTGAACCTGCAAACTATGCAGAAGCAAAGAAAGATCAAAGGTGGATAGCTGCAATGGAGGAGGAGTTGTCAATGATAGAGAAGAACAAAACTTGGATCCTTGTTGACAGACCTCAAGATAGGAAGGTAATTGGAGTTAAATGGGTGTTTAGAACCAAGCTTAATGCTGATGGCTCGATTAACAAGCACAAAGCCAGGCTTGTGGTTAAAGGGTATGCTCAAATCTTTGGTGTTGATTACTCTGATACTTTTGCTCCTGTTGCTAGAATGGACACAATCAGGTTACTATTTGCAATAGCTGCACAAAAGGGGTGGAAATTGTATCAGTTGGATGTCAAATCAGCTTTTTTGAATGGTGTCTTACAAGAAGAAATTTATGTTGAGCAGCCCGAAGGATGTGAGAAGCAAGGTGAAAGAAATAAAGTCTATCTTCTCAAGAAGGCTCTTTATGGTTTAAAACAAGCTCCAAGAGCTTGGTATAGCAAAATTGATGAACATTTACTGAGCTTGGGATTTTTGAAAAGTCTATCAGAATCAACCTTATATGTTAAGCACAATGGTACTAACATTCTTATTGTTTCACTGTATGTTGATGACCTACTGGTTACAGGAAACAATGCAGATCATATTCAAAATTTCAAATGGGAGATGATGAAGATGTTTGAAATGACAGATCTCGGGCTCATGTCCTACTTCCTTGGCATAGAGATCAAGCAAGGGCAAGGTGAAGTTTTCATTTGCCAGAAAAAATATGCAAAGGAAATACTAAAGAAGTTTAAGATGGATGAGTGTAAGGCTGTAAGCACTCCAATGAATCAAAAAGAGAAGTTGTGCAAAGAAGATGGTGCTGACAAAGTTGATGAAGGATATTTTAGGAGTTTAATTGGTTGCTTGATGTATCTCACAGCAACAAGACCTGATATTTTGAATGCTGTGAGTATTTTGTCTCGTTTCATGCATTGTGCAAGTGAATTACATCTTAAGGCAGCAAAAAGAGTGATACGATATGTCAAAGGCACAAGTGATTTTGGTGTTAAGTTCACTAGGGGCAAGGAGTTCAAACTGATTGGTTTTTCTGATAGTGATTGGGGAGGTTCCATTGATGATATGAGAAGCACTTTAGGTTACTGTTTTACTCTTAGCTCTGGTGTTTTCTCTTGGAGCTCGAAAAAGCAAGAGATTGTAGCCCAATCCACTGCTGAAGCAGAATTTATTGCTGCAACAGCTACTGCCAATCAAGCTTTATGGCTGAGGAAAATTTTACTTGACCTTGATCTGGAGCAGAAGAAAAGCACGGAGATTCTTGTTGATAACAAAGCGGCTATTGCTATTTCTCATAATCCTGTGTTTTATAAGAAGACTAAACATTTTAACATCAAGTTATTTTTTTTAAGGGAAGTGCAGAAAAGTGGAGAGGTGATTCTTGTCTACTGCAAAACAGAAGATCAAGTTGCAGACATATTAACTAAACCGTTGCCTACTTGCAAGTTCGAGTTTCTAAGGTCAAAACTTGGTGTTTGCAACTCCTAA

Protein sequence

MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS

Homology

[Close]

BLAST of Cmc12g0332011 vs. NCBI nr
Match: KAA0036309.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0039006.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0039248.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0063721.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYJ96423.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2627.8 bits (6810), Expect = 0.0e+00
Identity = 1314/1314 (100.00%), Postives = 1314/1314 (100.00%), Query Frame = 0


Query: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
            IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
            VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
            CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
            LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

Query: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1315
            HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Sbjct: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1314

[Close]

BLAST of Cmc12g0332011 vs. NCBI nr
Match: TYJ95793.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK04080.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK07482.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK23562.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK24808.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2626.3 bits (6806), Expect = 0.0e+00
Identity = 1313/1314 (99.92%), Postives = 1314/1314 (100.00%), Query Frame = 0


Query: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
            IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
            VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
            CLIKDAANQDIFKVKMKGKSFSLNPLEE+QSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
            LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

Query: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1315
            HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Sbjct: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1314

[Close]

BLAST of Cmc12g0332011 vs. NCBI nr
Match: TYK21117.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2626.3 bits (6806), Expect = 0.0e+00
Identity = 1313/1314 (99.92%), Postives = 1314/1314 (100.00%), Query Frame = 0


Query: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 117  MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 176

Query: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 177  KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 236

Query: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
            IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 237  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 296

Query: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 297  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 356

Query: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 357  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 416

Query: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 417  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 476

Query: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
            VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 477  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 536

Query: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
            CLIKDAANQDIFKVKMKGKSFSLNPLEE+QSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 537  CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 596

Query: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 597  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 656

Query: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 657  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 716

Query: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 717  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 776

Query: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 777  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 836

Query: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 837  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 896

Query: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 897  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 956

Query: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 957  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 1016

Query: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
            LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 1017 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1076

Query: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 1077 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1136

Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1137 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1196

Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1197 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1256

Query: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1257 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1316

Query: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1317 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1376

Query: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1315
            HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Sbjct: 1377 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1430

[Close]

BLAST of Cmc12g0332011 vs. NCBI nr
Match: KAA0025843.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2622.8 bits (6797), Expect = 0.0e+00
Identity = 1312/1314 (99.85%), Postives = 1312/1314 (99.85%), Query Frame = 0


Query: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
            IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
            VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
            CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
            LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

Query: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1315
            HFNIKLFFLREVQKSGEVILVYCKTE QV DILTKPLPTCKFEFLRSKLGVCNS
Sbjct: 1261 HFNIKLFFLREVQKSGEVILVYCKTEVQVVDILTKPLPTCKFEFLRSKLGVCNS 1314

[Close]

BLAST of Cmc12g0332011 vs. NCBI nr
Match: KAA0048005.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2613.2 bits (6772), Expect = 0.0e+00
Identity = 1309/1314 (99.62%), Postives = 1309/1314 (99.62%), Query Frame = 0


Query: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWE VEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEVVEEDYEIPALPDNPTMAQI 60

Query: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
            IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240
            ENTKDLTQITLAEILNALQ QEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQTQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
            VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
            CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
            LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
            K CKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 K-CKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

Query: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1315
            HFNIKLFFLREVQKSGE ILVYCKTEDQVADILTKPL TCKFEFLRSKLGVCNS
Sbjct: 1261 HFNIKLFFLREVQKSGEAILVYCKTEDQVADILTKPLLTCKFEFLRSKLGVCNS 1313

[Close]

BLAST of Cmc12g0332011 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 1.5e-181
Identity = 434/1371 (31.66%), Postives = 693/1371 (50.55%), Query Frame = 0


Query: 17   FDGDN-YQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKA 76
            F+GDN +  W  RM   +    + + ++ D + P        A +           +A +
Sbjct: 11   FNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADL---------DERAAS 70

Query: 77   CLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESI 136
             +   +S  +   I+   +A  IW  L+S Y           L L ++     M E  + 
Sbjct: 71   AIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTL---TNKLYLKKQLYALHMSEGTNF 130

Query: 137  KEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEIL 196
              +      +  Q+  LG   ++      +L S+P  ++   + + + K  T I L ++ 
Sbjct: 131  LSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGK--TTIELKDVT 190

Query: 197  NALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVK-- 256
            +AL   E+ R            P    + +    + + ++      R S+ Y ++G +  
Sbjct: 191  SALLLNEKMRKK----------PENQGQALITEGRGRSYQ------RSSNNYGRSGARGK 250

Query: 257  -----KGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHE-----AVICRNNNQQQGV 316
                 K     C +CN+ GH    C   PN +  K    G +     A + +NN+     
Sbjct: 251  SKNRSKSRVRNCYNCNQPGHFKRDC---PNPRKGKGETSGQKNDDNTAAMVQNNDN---- 310

Query: 317  EAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITKVRI 376
               + +  EEEE       C         W++D+  ++H T  ++LF      +   V++
Sbjct: 311  --VVLFINEEEE-------CMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKM 370

Query: 377  GNGDYISVKGKGTIAIASCKG-TKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENE--- 436
            GN  Y  + G G I I +  G T  ++DV  VPD+  NL+S   L   G++  F N+   
Sbjct: 371  GNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWR 430

Query: 437  -----YCLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQG 496
                   + K  A   +++   +     LN  +++ SV         LWHKR+GH   +G
Sbjct: 431  LTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISV--------DLWHKRMGHMSEKG 490

Query: 497  LLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPS 556
            L  L + +L        +  C  C FGKQ+R SF  SS R    L L+++DV GP    S
Sbjct: 491  LQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIES 550

Query: 557  LKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYV 616
            + G+ Y++ FIDD +R  W++ LK K +V  VF KF A VE E+G K++ +RSDNG EY 
Sbjct: 551  MGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYT 610

Query: 617  SAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANT 676
            S EF+++C   GI+H+ T P TPQ NGV+ER NR I+E  R ML    LPK FW EA  T
Sbjct: 611  SREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQT 670

Query: 677  AVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVF 736
            A +L NR P+  L  + P   W   + S   LKVFGC  F HVP+ +R KLD ++ P +F
Sbjct: 671  ACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIF 730

Query: 737  IGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSS--- 796
            IGY      Y+++ P   K++ SRDV F E E     D  +K +      F    S+   
Sbjct: 731  IGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNN 790

Query: 797  ----------IEEEDDRQNEIVD-----DASVRGT-------------------RLLSDI 856
                      + E+ ++  E+++     D  V                      R+ S  
Sbjct: 791  PTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRR 850

Query: 857  YERCNVAVCEPANYAEAKKD-------QRWIAAMEEELSMIEKNKTWILVDRPQDRKVIG 916
            Y      +       E+ K+        + + AM+EE+  ++KN T+ LV+ P+ ++ + 
Sbjct: 851  YPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLK 910

Query: 917  VKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGW 976
             KWVF+ K + D  + ++KARLVVKG+ Q  G+D+ + F+PV +M +IR + ++AA    
Sbjct: 911  CKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDL 970

Query: 977  KLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDE 1036
            ++ QLDVK+AFL+G L+EEIY+EQPEG E  G+++ V  L K+LYGLKQAPR WY K D 
Sbjct: 971  EVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDS 1030

Query: 1037 HLLSLGFLKSLSESTLYVKH-NGTNILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMT 1096
             + S  +LK+ S+  +Y K  +  N +I+ LYVDD+L+ G +   I   K ++ K F+M 
Sbjct: 1031 FMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMK 1090

Query: 1097 DLGLMSYFLGIEI--KQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDG 1156
            DLG     LG++I  ++   ++++ Q+KY + +L++F M   K VSTP+    KL K+  
Sbjct: 1091 DLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMC 1150

Query: 1157 ADKVDEG------YFRSLIGCLMY-LTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1216
               V+E        + S +G LMY +  TRPDI +AV ++SRF+    + H +A K ++R
Sbjct: 1151 PTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILR 1210

Query: 1217 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1276
            Y++GT+   + F  G +  L G++D+D  G ID+ +S+ GY FT S G  SW SK Q+ V
Sbjct: 1211 YLRGTTGDCLCF-GGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCV 1270

Query: 1277 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1312
            A ST EAE+IAAT T  + +WL++ L +L L QK+   +  D+++AI +S N +++ +TK
Sbjct: 1271 ALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYV-VYCDSQSAIDLSKNSMYHARTK 1325

[Close]

BLAST of Cmc12g0332011 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 6.6e-161
Identity = 424/1455 (29.14%), Postives = 684/1455 (47.01%), Query Frame = 0


Query: 21   NYQVWAVRMEAYMEALDIWEAVEEDYEI-PALPDNPTMAQIKAQKEKKTKKSK-AKACLF 80
            NY +W+ ++ A  +  ++   ++    + PA        ++     +  ++ K   + + 
Sbjct: 30   NYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLIYSAVL 89

Query: 81   AAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEY 140
             A+S ++   +    +A +IW  L+  Y         ++   ++++     K T++I +Y
Sbjct: 90   GAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQW----TKGTKTIDDY 149

Query: 141  SVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNAL 200
               L+   +Q+ LLG        VE++L ++PE+++  I  +   KD T  TL EI   L
Sbjct: 150  MQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIA-AKD-TPPTLTEIHERL 209

Query: 201  QAQEQRRAMRQEGAV--EGALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGS 260
               E +        V    A    H      N      + N+   R ++  +K       
Sbjct: 210  LNHESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSK------- 269

Query: 261  YPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEED 320
              P    +   HP     +    KC  C   GH A  C   +Q Q   + +  Q+     
Sbjct: 270  --PWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRC---SQLQHFLSSVNSQQPPSPF 329

Query: 321  QLFV--ATCFVGGE-SNESWLIDSGCTNHMTHDKELFKDLKP-TNITKVRIGNGDYISVK 380
              +   A   +G   S+ +WL+DSG T+H+T D       +P T    V + +G  I + 
Sbjct: 330  TPWQPRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPIS 389

Query: 381  GKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIE-KGFKVTFENEYCLIKDA-ANQD 440
              G+ ++++     ++ ++L+VP+I++NL+SV +L    G  V F      +KD      
Sbjct: 390  HTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVP 449

Query: 441  IFKVKMKGKSFSLNPLEEKQ--SVFALKEDET--QLWHKRVGHYHHQGLLQ-LTELALDF 500
            + + K K + +   P+   Q  S+FA    +     WH R+GH     L   ++  +L  
Sbjct: 450  LLQGKTKDELYEW-PIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSV 509

Query: 501  PKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLK--GSLYYIA 560
               S +  SC  C   K N+  F +S+  +T+ L+ I++DV     +P L      YY+ 
Sbjct: 510  LNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDV---WSSPILSHDNYRYYVI 569

Query: 561  FIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDKFCE 620
            F+D FTR  W++ LK KS+V   F  FK  +EN    +I    SDNG E+V+    ++  
Sbjct: 570  FVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVA--LWEYFS 629

Query: 621  DSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQNRLP 680
              GI H  + P+TP+ NG+SER++R+I+E    +L   S+PK +W  A   AV+L NRLP
Sbjct: 630  QHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLP 689

Query: 681  TKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSISKA 740
            T  L+ ++PF+  +G  P+   L+VFGC C+  +    + KLD ++   VF+GYS    A
Sbjct: 690  TPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSA 749

Query: 741  YKIFQPQTGKIVVSRDVHFEED---------------EE-------WN------------ 800
            Y     QT ++ +SR V F+E+               E+       W+            
Sbjct: 750  YLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVL 809

Query: 801  ---------------------FDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN-------- 860
                                 F +++     L+      F SS E    RQN        
Sbjct: 810  PAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQP 869

Query: 861  ------------------------------------------------------------ 920
                                                                        
Sbjct: 870  TQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSIL 929

Query: 921  --------EIVD-------DASVRGTRLLSDIYE---RCNVAV-----CEPANYAEAKKD 980
                    +IV+       +    GTR  + I +   + ++AV      EP    +A KD
Sbjct: 930  IHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKD 989

Query: 981  QRWIAAMEEELSMIEKNKTWILVDRPQDR-KVIGVKWVFRTKLNADGSINKHKARLVVKG 1040
            +RW  AM  E++    N TW LV  P     ++G +W+F  K N+DGS+N++KARLV KG
Sbjct: 990  ERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKG 1049

Query: 1041 YAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPE 1100
            Y Q  G+DY++TF+PV +  +IR++  +A  + W + QLDV +AFL G L +++Y+ QP 
Sbjct: 1050 YNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPP 1109

Query: 1101 GCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNIL 1160
            G   +   N V  L+KALYGLKQAPRAWY ++  +LL++GF+ S+S+++L+V   G +I+
Sbjct: 1110 GFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIV 1169

Query: 1161 IVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKY 1220
             + +YVDD+L+TGN+   + N    + + F + D   + YFLGIE K+    + + Q++Y
Sbjct: 1170 YMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRY 1229

Query: 1221 AKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNA 1280
              ++L +  M   K V+TPM    KL    G    D   +R ++G L YL  TRPDI  A
Sbjct: 1230 ILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYA 1289

Query: 1281 VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMR 1312
            V+ LS+FMH  +E HL+A KR++RY+ GT + G+   +G    L  +SD+DW G  DD  
Sbjct: 1290 VNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYV 1349

[Close]

BLAST of Cmc12g0332011 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 563.5 bits (1451), Expect = 6.1e-159
Identity = 426/1451 (29.36%), Postives = 693/1451 (47.76%), Query Frame = 0


Query: 17   FDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKAC 76
            FDG+ Y +W  R+ A +   D+ + V+       +P+    +  KA++        AK+ 
Sbjct: 11   FDGEKYAIWKFRIRALLAEQDVLKVVD-----GLMPNEVDDSWKKAER-------CAKST 70

Query: 77   LFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIK 136
            +   +S +      +  +A +I   L + Y   ER      L L +     K+    S+ 
Sbjct: 71   IIEYLSDSFLNFATSDITARQILENLDAVY---ERKSLASQLALRKRLLSLKLSSEMSLL 130

Query: 137  EYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILN 196
             +     ++ +++   G+  ++   +  +L+++P  ++  I+A+E   +   +TLA + N
Sbjct: 131  SHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSE-ENLTLAFVKN 190

Query: 197  ALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGS 256
             L  QE +         +  + A  H N  NN  K    KN+++  +      +  K   
Sbjct: 191  RLLDQEIKIKNDHNDTSKKVMNAIVHNN--NNTYKNNLFKNRVTKPKKIFKGNSKYK--- 250

Query: 257  YPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQQGVEAK------IAYQ 316
               C HC ++GH    C+              H   I  N N++   + +      IA+ 
Sbjct: 251  -VKCHHCGREGHIKKDCF--------------HYKRILNNKNKENEKQVQTATSHGIAFM 310

Query: 317  EEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKD----LKPTNITKVRIGNG 376
             +E  +   +  C         +++DSG ++H+ +D+ L+ D    + P  I   +   G
Sbjct: 311  VKEVNNTSVMDNC--------GFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAK--QG 370

Query: 377  DYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEYCLIKDA 436
            ++I    +G + + +      ++DVLF  +   NL+SV +L E G  + F+     I   
Sbjct: 371  EFIYATKRGIVRLRNDHEIT-LEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTI--- 430

Query: 437  ANQDIFKVKMKGKSFSLNPLE-EKQSVFALKEDETQLWHKRVGHYHHQGLLQL------- 496
            +   +  VK  G   ++  +  +  S+ A  ++  +LWH+R GH     LL++       
Sbjct: 431  SKNGLMVVKNSGMLNNVPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFS 490

Query: 497  TELALDFPKLSEEISSCKACHFGKQNRKSFP--KSSWRATQKLQLIHTDVAGPQRTPSLK 556
             +  L+  +LS EI  C+ C  GKQ R  F   K      + L ++H+DV GP    +L 
Sbjct: 491  DQSLLNNLELSCEI--CEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLD 550

Query: 557  GSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSA 616
               Y++ F+D FT  C  + +K+KS+V  +F  F A+ E     K+  +  DNG+EY+S 
Sbjct: 551  DKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSN 610

Query: 617  EFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAV 676
            E  +FC   GI + LT P+TPQ NGVSER  R I E  R M+    L K FW EA  TA 
Sbjct: 611  EMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTAT 670

Query: 677  FLQNRLPTKAL--KEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVF 736
            +L NR+P++AL    KTP+E W+  KP LK L+VFG   + H+ ++K+ K D ++   +F
Sbjct: 671  YLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHI-KNKQGKFDDKSFKSIF 730

Query: 737  IGYSSISKAYKIFQPQTGKIVVSRD-------------VHFE------------------ 796
            +GY      +K++     K +V+RD             V FE                  
Sbjct: 731  VGYE--PNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPND 790

Query: 797  --------------------------EDEEWNF-DDAEKKGQT----------------- 856
                                      E E  NF +D+ K  QT                 
Sbjct: 791  SRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKD 850

Query: 857  -LEKMKFKFFDSSIEEEDDRQNE-----------------------IVDDASVRGTRLLS 916
              E  K+   +S   + DD  NE                       I +     G  +++
Sbjct: 851  SKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIIN 910

Query: 917  DIYER---------------CNVAVCE--------PANYAEAK-KDQR--WIAAMEEELS 976
               ER                N  V          P ++ E + +D +  W  A+  EL+
Sbjct: 911  RRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELN 970

Query: 977  MIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTF 1036
              + N TW +  RP+++ ++  +WVF  K N  G+  ++KARLV +G+ Q + +DY +TF
Sbjct: 971  AHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETF 1030

Query: 1037 APVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYL 1096
            APVAR+ + R + ++  Q   K++Q+DVK+AFLNG L+EEIY+  P+G     +   V  
Sbjct: 1031 APVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSD--NVCK 1090

Query: 1097 LKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYV--KHNGTNILIVSLYVDDLLV 1156
            L KA+YGLKQA R W+   ++ L    F+ S  +  +Y+  K N    + V LYVDD+++
Sbjct: 1091 LNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVI 1150

Query: 1157 TGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMD 1216
               +   + NFK  +M+ F MTDL  + +F+GI I+  + ++++ Q  Y K+IL KF M+
Sbjct: 1151 ATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNME 1210

Query: 1217 ECKAVSTPMNQK---EKLCKEDGADKVDEGYFRSLIGCLMY-LTATRPDILNAVSILSRF 1276
             C AVSTP+  K   E L  ++  +       RSLIGCLMY +  TRPD+  AV+ILSR+
Sbjct: 1211 NCNAVSTPLPSKINYELLNSDEDCNTP----CRSLIGCLMYIMLCTRPDLTTAVNILSRY 1270

Query: 1277 MHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEF--KLIGFSDSDWGGSIDDMRSTLGY 1312
                +    +  KRV+RY+KGT D  + F +   F  K+IG+ DSDW GS  D +ST GY
Sbjct: 1271 SSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGY 1330

[Close]

BLAST of Cmc12g0332011 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 5.6e-152
Identity = 413/1464 (28.21%), Postives = 659/1464 (45.01%), Query Frame = 0


Query: 21   NYQVWAVRMEAYMEALDIWEAVEEDYEI-PALPDNPTMAQIKAQKEKKTKKSK-AKACLF 80
            NY +W+ ++ A  +  ++   ++    + PA      + ++     +  ++ K   + + 
Sbjct: 30   NYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLIYSAIL 89

Query: 81   AAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEY 140
             A+S ++   +    +A +IW  L+  Y  +     +  L  I  F+             
Sbjct: 90   GAISMSVQPAVSRATTAAQIWETLRKIY-ANPSYGHVTQLRFITRFD------------- 149

Query: 141  SVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNAL 200
                     Q+ LLG        VE++L ++P+ ++  I  +   KD T  +L EI   L
Sbjct: 150  ---------QLALLGKPMDHDEQVERVLENLPDDYKPVIDQIA-AKD-TPPSLTEIHERL 209

Query: 201  QAQEQR-RAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSY 260
              +E +  A+     V        H N   N       +NQ +  ++  YN    +  S+
Sbjct: 210  INRESKLLALNSAEVVPITANVVTHRNTNTN-------RNQNNRGDNRNYNNNNNRSNSW 269

Query: 261  PPCSHCNKQGHPPFKCWRRPN---AKCTKCNQMGHEAVIC-------RNNNQQQGVEAKI 320
             P S  ++  +      R+P     +C  C+  GH A  C          NQQQ      
Sbjct: 270  QPSSSGSRSDN------RQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFT 329

Query: 321  AYQEEEEEDQLFVATCFVGGESN-ESWLIDSGCTNHMTHDKELFKDLKP-TNITKVRIGN 380
             +Q          A   V    N  +WL+DSG T+H+T D       +P T    V I +
Sbjct: 330  PWQPR--------ANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIAD 389

Query: 381  GDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKG-FKVTFENEYCLIK 440
            G  I +   G+ ++ +   +  +  VL+VP+I++NL+SV +L       V F      +K
Sbjct: 390  GSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVK 449

Query: 441  DA-ANQDIFKVKMKGKSFSLNPLEEKQ--SVFA--LKEDETQLWHKRVGHYHHQGLLQ-L 500
            D      + + K K + +   P+   Q  S+FA    +     WH R+GH     L   +
Sbjct: 450  DLNTGVPLLQGKTKDELYEW-PIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVI 509

Query: 501  TELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGS 560
            +  +L     S ++ SC  C   K ++  F  S+  +++ L+ I++DV       S+   
Sbjct: 510  SNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDV-WSSPILSIDNY 569

Query: 561  LYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEF 620
             YY+ F+D FTR  W++ LK KS+V   F  FK+ VEN    +I  + SDNG E+V    
Sbjct: 570  RYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLR- 629

Query: 621  DKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFL 680
              +    GI H  + P+TP+ NG+SER++R+I+EM   +L   S+PK +W  A + AV+L
Sbjct: 630  -DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYL 689

Query: 681  QNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYS 740
             NRLPT  L+ ++PF+  +G  P+ + LKVFGC C+  +    R KL+ ++    F+GYS
Sbjct: 690  INRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYS 749

Query: 741  SISKAYKIFQPQTGKIVVSRDVHFEE--------------DEEWNFDDAEKKGQ------ 800
                AY      TG++  SR V F+E               +E   D A           
Sbjct: 750  LTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPT 809

Query: 801  -----------------------------TLEKMKFKFFDSSIEE--------------- 860
                                         T +        SSI                 
Sbjct: 810  TPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQ 869

Query: 861  ----------------------------EDDRQNEIVDDASV------------------ 920
                                            QN  +  + +                  
Sbjct: 870  PTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSP 929

Query: 921  --------------------------------RGTRLLSDI--------YERCNVAVCEP 980
                                              TR    I        Y     A  EP
Sbjct: 930  SSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEP 989

Query: 981  ANYAEAKKDQRWIAAMEEELSMIEKNKTWILVDRPQDR-KVIGVKWVFRTKLNADGSINK 1040
                +A KD RW  AM  E++    N TW LV  P     ++G +W+F  K N+DGS+N+
Sbjct: 990  RTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNR 1049

Query: 1041 HKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQ 1100
            +KARLV KGY Q  G+DY++TF+PV +  +IR++  +A  + W + QLDV +AFL G L 
Sbjct: 1050 YKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLT 1109

Query: 1101 EEIYVEQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLY 1160
            +E+Y+ QP G   +   + V  L+KA+YGLKQAPRAWY ++  +LL++GF+ S+S+++L+
Sbjct: 1110 DEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLF 1169

Query: 1161 VKHNGTNILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQG 1220
            V   G +I+ + +YVDD+L+TGN+   +++    + + F + +   + YFLGIE K+   
Sbjct: 1170 VLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQ 1229

Query: 1221 EVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLT 1280
             + + Q++Y  ++L +  M   K V+TPM    KL    G    D   +R ++G L YL 
Sbjct: 1230 GLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLA 1289

Query: 1281 ATRPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSD 1312
             TRPD+  AV+ LS++MH  ++ H  A KRV+RY+ GT D G+   +G    L  +SD+D
Sbjct: 1290 FTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDAD 1349

[Close]

BLAST of Cmc12g0332011 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 164.1 bits (414), Expect = 1.1e-38
Identity = 100/304 (32.89%), Postives = 161/304 (52.96%), Query Frame = 0


Query: 915  LDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLS 974
            +DV +AFLN  + E IYV+QP G   +   + V+ L   +YGLKQAP  W   I+  L  
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 975  LGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLM 1034
            +GF +   E  LY +      + +++YVDDLLV   +       K E+ K++ M DLG +
Sbjct: 61   IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 1035 SYFLGIEIKQ-GQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDE 1094
              FLG+ I Q   G++ +  + Y  +   + +++  K   TP+   + L +       D 
Sbjct: 121  DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 1095 GYFRSLIGCLMYLTAT-RPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKF 1154
              ++S++G L++   T RPDI   VS+LSRF+     +HL++A+RV+RY+  T    +K+
Sbjct: 181  TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240

Query: 1155 TRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKK-QEIVAQSTAEAEFIA 1214
              G +  L  + D+  G   D   ST GY   L+    +WSSKK + ++   + EAE+I 
Sbjct: 241  RSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYIT 300

Query: 1215 ATAT 1216
            A+ T
Sbjct: 301  ASET 304

[Close]

BLAST of Cmc12g0332011 vs. ExPASy TrEMBL
Match: A0A5D3E2V7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00370 PE=4 SV=1)

HSP 1 Score: 2627.8 bits (6810), Expect = 0.0e+00
Identity = 1314/1314 (100.00%), Postives = 1314/1314 (100.00%), Query Frame = 0


Query: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
            IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
            VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
            CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
            LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

Query: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1315
            HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Sbjct: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1314

[Close]

BLAST of Cmc12g0332011 vs. ExPASy TrEMBL
Match: A0A5D3DMJ1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00670 PE=4 SV=1)

HSP 1 Score: 2626.3 bits (6806), Expect = 0.0e+00
Identity = 1313/1314 (99.92%), Postives = 1314/1314 (100.00%), Query Frame = 0


Query: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
            IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
            VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
            CLIKDAANQDIFKVKMKGKSFSLNPLEE+QSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
            LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

Query: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1315
            HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Sbjct: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1314

[Close]

BLAST of Cmc12g0332011 vs. ExPASy TrEMBL
Match: A0A5D3DBU0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00950 PE=4 SV=1)

HSP 1 Score: 2626.3 bits (6806), Expect = 0.0e+00
Identity = 1313/1314 (99.92%), Postives = 1314/1314 (100.00%), Query Frame = 0


Query: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 117  MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 176

Query: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 177  KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 236

Query: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
            IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 237  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 296

Query: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 297  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 356

Query: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 357  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 416

Query: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 417  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 476

Query: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
            VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 477  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 536

Query: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
            CLIKDAANQDIFKVKMKGKSFSLNPLEE+QSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 537  CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 596

Query: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 597  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 656

Query: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 657  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 716

Query: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 717  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 776

Query: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 777  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 836

Query: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 837  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 896

Query: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 897  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 956

Query: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 957  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 1016

Query: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
            LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 1017 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1076

Query: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 1077 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1136

Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1137 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1196

Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1197 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1256

Query: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1257 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1316

Query: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1317 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1376

Query: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1315
            HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Sbjct: 1377 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1430

[Close]

BLAST of Cmc12g0332011 vs. ExPASy TrEMBL
Match: A0A5A7SMD9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001130 PE=4 SV=1)

HSP 1 Score: 2622.8 bits (6797), Expect = 0.0e+00
Identity = 1312/1314 (99.85%), Postives = 1312/1314 (99.85%), Query Frame = 0


Query: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
            IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
            VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
            CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
            LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

Query: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1315
            HFNIKLFFLREVQKSGEVILVYCKTE QV DILTKPLPTCKFEFLRSKLGVCNS
Sbjct: 1261 HFNIKLFFLREVQKSGEVILVYCKTEVQVVDILTKPLPTCKFEFLRSKLGVCNS 1314

[Close]

BLAST of Cmc12g0332011 vs. ExPASy TrEMBL
Match: A0A5A7U2V6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00710 PE=4 SV=1)

HSP 1 Score: 2613.2 bits (6772), Expect = 0.0e+00
Identity = 1309/1314 (99.62%), Postives = 1309/1314 (99.62%), Query Frame = 0


Query: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWE VEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEVVEEDYEIPALPDNPTMAQI 60

Query: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
            IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240
            ENTKDLTQITLAEILNALQ QEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQTQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
            VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
            CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
            LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
            K CKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 K-CKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

Query: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1315
            HFNIKLFFLREVQKSGE ILVYCKTEDQVADILTKPL TCKFEFLRSKLGVCNS
Sbjct: 1261 HFNIKLFFLREVQKSGEAILVYCKTEDQVADILTKPLLTCKFEFLRSKLGVCNS 1313

[Close]

BLAST of Cmc12g0332011 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 357.5 bits (916), Expect = 4.7e-98
Identity = 190/475 (40.00%), Postives = 286/475 (60.21%), Query Frame = 0


Query: 801  CNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLN 860
            C     EP+ Y EAK+   W  AM++E+  +E   TW +   P ++K IG KWV++ K N
Sbjct: 79   CIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYN 138

Query: 861  ADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSA 920
            +DG+I ++KARLV KGY Q  G+D+ +TF+PV ++ +++L+ AI+A   + L+QLD+ +A
Sbjct: 139  SDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNA 198

Query: 921  FLNGVLQEEIYVEQPEG-CEKQGER---NKVYLLKKALYGLKQAPRAWYSKIDEHLLSLG 980
            FLNG L EEIY++ P G   +QG+    N V  LKK++YGLKQA R W+ K    L+  G
Sbjct: 199  FLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFG 258

Query: 981  FLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSY 1040
            F++S S+ T ++K   T  L V +YVDD+++  NN   +   K ++   F++ DLG + Y
Sbjct: 259  FVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKY 318

Query: 1041 FLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYF 1100
            FLG+EI +    + ICQ+KYA ++L +  +  CK  S PM+         G D VD   +
Sbjct: 319  FLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAY 378

Query: 1101 RSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGK 1160
            R LIG LMYL  TR DI  AV+ LS+F       H +A  +++ Y+KGT   G+ ++   
Sbjct: 379  RRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQA 438

Query: 1161 EFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATA 1220
            E +L  FSD+ +    D  RST GYC  L + + SW SKKQ++V++S+AEAE+ A +   
Sbjct: 439  EMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFAT 498

Query: 1221 NQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLRE 1272
            ++ +WL +   +L L   K T +  DN AAI I+ N VF+++TKH       +RE
Sbjct: 499  DEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

[Close]

BLAST of Cmc12g0332011 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 158.7 bits (400), Expect = 3.2e-38
Identity = 89/222 (40.09%), Postives = 126/222 (56.76%), Query Frame = 0


Query: 1000 LYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKE 1059
            LYVDD+L+TG++   +    +++   F M DLG + YFLGI+IK     +F+ Q KYA++
Sbjct: 5    LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 1060 ILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSI 1119
            IL    M +CK +STP+  K        A   D   FRS++G L YLT TRPDI  AV+I
Sbjct: 65   ILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 124

Query: 1120 LSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTL 1179
            + + MH  +       KRV+RYVKGT   G+   +  +  +  F DSDW G     RST 
Sbjct: 125  VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTT 184

Query: 1180 GYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALW 1222
            G+C  L   + SWS+K+Q  V++S+ E E+ A   TA +  W
Sbjct: 185  GFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc12g0332011 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-21
Identity = 47/101 (46.53%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 807 EPANYAEAKKDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSIN 866
           EP +   A KD  W  AM+EEL  + +NKTWILV  P ++ ++G KWVF+TKL++DG+++
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 867 KHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQ 908
           + KARLV KG+ Q  G+ + +T++PV R  TIR +  +A Q
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ 127

[Close]

BLAST of Cmc12g0332011 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 2.0e-11
Identity = 39/100 (39.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 627 NRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFL 686
           NR I+E  R ML E  LPK F A+AANTAV + N+ P+ A+    P E W+   P+  +L
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 687 KVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSISKAYKI 727
           + FGC+ + H  +    KL  RA  G   G   I++   I
Sbjct: 62  RRFGCVAYIHCDEG---KLKPRAKKGEEKGSYLINRIVSI 98

[Close]

BLAST of Cmc12g0332011 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.7e-10
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 1104 MYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGF 1163
            MYLT TRPD+  AV+ LS+F   +    ++A  +V+ YVKGT   G+ ++   + +L  F
Sbjct: 1    MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 1164 SDSDWGGSIDDMRSTLGYC 1183
            +DSDW    D  RS  G+C
Sbjct: 61   ADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:

BLAST of Cmc12g0332011 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036309.1	0.0e+00	100.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYJ95793.1	0.0e+00	99.92	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK21117.1	0.0e+00	99.92	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0025843.1	0.0e+00	99.85	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0048005.1	0.0e+00	99.62	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc12g0332011 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.5e-181	31.66	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q94HW2	6.6e-161	29.14	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P04146	6.1e-159	29.36	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	5.6e-152	28.21	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P25600	1.1e-38	32.89	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc12g0332011 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E2V7	0.0e+00	100.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DMJ1	0.0e+00	99.92	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DBU0	0.0e+00	99.92	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SMD9	0.0e+00	99.85	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7U2V6	0.0e+00	99.62	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc12g0332011 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	4.7e-98	40.00	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	3.2e-38	40.09	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	2.1e-21	46.53	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00710.1	2.0e-11	39.00	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
ATMG00240.1	1.7e-10	40.51	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 442..503 e-value: 1.6E-9 score: 37.4
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 516..617 e-value: 4.9E-17 score: 62.1
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 505..680 score: 24.503267
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 834..1076 e-value: 1.2E-87 score: 293.6
IPR025314	Domain of unknown function DUF4219	PFAM	PF13961	DUF4219	coord: 17..43 e-value: 2.5E-11 score: 43.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 511..691 e-value: 5.4E-47 score: 161.6
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 67..207 e-value: 2.7E-27 score: 95.2
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 331..1197
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1161..1299 e-value: 5.19604E-67 score: 220.032
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 519..689
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 833..1266
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 255..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0332011.1	Cmc12g0332011.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding