Cmc12g0330261 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0330261
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	SAP-like protein BP-73
Location	CMiso1.1chr12: 21298190 .. 21302113 (+)
RNA-Seq Expression	Cmc12g0330261
Synteny	Cmc12g0330261

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGTTGTCCGATTCTCTTCCTTAACTTTTGAACTTCTTCCCATTTCTCTGCCTCTGCATAGATGTTCGCCAAGAGTACATAATAGCCAGTGTTTTCTGGTTCTAGCTCGAAGATTCGTTCAGCAACTTTCTCTGCTAGTTTGACATCATGGTGTATCCTGCATCCACACAACAATGCACCCCAGATGGTGGCATCTGGTTTGATTGGCATCGTTTGGATGAATTTATGTGCCTTCACCAGATTCCCGGTTCGGGCAAGAAGATCCACCATACATGCATAGTGCTCTAGGTTGGGTTCAATCTGACATTCTTTCTTCATAATACTGAAAATTTTCCATCCTTCATCAAGCAATCCAGAATGGCTGCAGGCATAAAGGATTGAAATGAAGGAAACTTCATCGGGCTTAATCCCAGTCATTCTCATCTGATTAAAGGTATTGATAGCTTCGCTACCAAAGCCATGCATCCCATATCCAGCTATCATCACTGTCCATGAGACTAGGTCCTTATTGAGAATCATATCAAAGAATGATCGGGCGAGAACTAATAGCCCGCACTTCACATACATATCGAGAAGTGCATTAACGACAAATTTGTCTTCAGAATATCCGTTTCTTAATGCATATCCATGGATTTCTCTACCTCTGTCCAAAGCTGCAAGGCTCGCACAGGCAGGAAGGATGCACGCAACTGTTGTGCCATCGGGCTTTGATTCGCTTTGCATCTCTGCAAACAAGGTAAGAGCTTCGTTTGGAAGACGGTTCTTTGAGTAACCTCCAATCATAGTATTCCATGATATAACATCCTTCTTTTTCATATGAGAAAACACATCATGTGCATCCTTCATGCTGCCGCACTTGGCGTACATGTCCGTGAGAGCATTACTAACAAACGAGTTAGTTTCCAAGTTGTTTTCTCTGATGTAATCGTGTACAATCTGCCCACTTTTCAGGTTTCCGTTAATAGCACAAGCATGAAGAATGCTTGTAACAGCATAGACATCTGGGACAACGCCTCTGCTTTTCATTTCATCAAACAACTTGATTGCACCATCGGACAGACCTTCACGAACATAGCCGGTGATCATCGAAGTCCAAGATACAACAGTTTTCTCATCCATTCTCTCAAAAACTCGAATGGCACTGTTCAAATCCCCACATTTTGAGTACATGTCCAATAAAGTATTATTGAACCTAACTTCTCTGTCAAGAGCAGCAGCCTTTATTGAATAAGAATGAAGTACCTTTCCGAACAAAAGAGTGCCTGTATTTGCACAAGCTACAAGCACATTAACCATTGTAGCCAAATCAATTTCAACACCGAAAACCAACATCTTTATGAAAATCTCAATTCCTCTGTCATCTAAACCATTCTTAACATAGCCACTGATCATAGAGTTCCATGAAATGACATCTCGGTCAGTCAATTCATCGAACAGCTTCTGTGCACATCTAACCTTTCTACCAACAAAGTAGAATGAAATTAATGAATTTACGACTGTGTTATAAGAATTATAACCCAATTTATAGATCAACCCATGAACCTGCCTACCCTCTTCCACACGTGCAACTGCTGCGAAACACTTCAAAACACTAGAAAATGTATATGAATTAGGTTTTATCCCCAACTCCAGCATTTGCTTGAACAAATTTATACTCTCTCCATAGTTACCATTTCCTAAATACTCACTAATCATAAGGTTCCAGATAAAAACCTTACTTTCAGAAAGTTTATCAAAAATCATCCTCCCTTCTTTTAGATCCCCACATTTAACATACATAAAAACTAGTTTCACCCCCAAGATTCCATCTATTATAACCCCACTAGATTCAATTATTGAATGAACCCTTCTTCCATCTCGTATAGATTTTCGTTCAGCACATAGCTGCAAGATGGAGCAAAAAGCATCCAAGTCAAAGTTGGAATTTTGGGAACTGCAAAGAAGCTCCATAGCATTTTTGAGATCTCCCACTTCACAAAACTCGACAATTTTGCGGGAACTATCCAGTTCAACATCCATATAGCTTTTCGTTTCCATTGCTGGGGCATAGGCCAAACTTGAAAAGGAAAGTTTCGAATTCGGTTTGGCAAAAAGAAAAGATTGCCGGAATTTCAAGTTCACTGAGCCACGATGATCGTGCCCGGCCGGAGATAGCCAAAAGGTTACAGGGGCTTTTGCTGTCAGTAACATCATGCCTTTCGCCGAGGAGCCTCGGTAAGAAACAACATAAAGGGTAACGAAATTTCGCTATTATAGAAAGAGAAAGCAATAGTGGGGACAAATGAACAGAAAGAATGGATAGTGAGATGTCCACGTGGGAACACGATCTTCAGAAGCTAAATGGCCCATCAGTGAATTGGCATTAAAGAGGAACCGACCTATATAACATACACAGCTTGTGGATATGATGCAATTTGGATATTCATAGAATTTCATTTTTCTAGGGAAAATCAGATGGAAGCAGTAGTTTTCCTGCCTCGTATTCAAATCCGCTTTCCCAATTTAATCTCTTTGAGAAGAAGACCCACGTTCGCTTCGAAAGGTATCACTAGCTTGAAACTCCCAATAAGTCTTGAATTTAGCAAATCCATTGTTTGCTTAGCCAAGTGTTTAAAATGAAAAATCTACTTGAGTTTTGTCAACATTTTTTATTGCAGAATTTGTGGATCTTGTGCACTTCTCACAAGCTGAGGGATTAACTTTTGATGCAGCTTGTTAAATTTGGCAGACATTGCAGATGTTTACCCCAGTAAGAACATTCAACTATCTGTTTCGAACAATAGGCCAGATGGGAATGCTGGGAATGCCAGAAATCGACCTCCTCGTAGAAACTCTTTGCCAGGGAAAACGAGGAAGAGTGAATCTTCTTCGAGGAAAAAAGAAGCCCCCAAGAATGAGGAAAACATAAAAAAATCAAAACCCAATGACCAGGAGGAAATAATTGCTCTGTTCAGAAAGATTCAGGCTTCTATTGCTAAGGAATCGGCAAGCTCCATTGATGAAGAATCCCACAAGGATGAACATGGAGCCACGTCTATTCTAGAGACCCTTCGTGAACCAAGAAAGCAGTTAAAAGGTAATTTAATTTCTTTATTGTCACATCTAATGCTTTTGTGAGAAATTTGGTCCACCTTTAAATCCATGAATGCATCTCACAAGAACTAAAATTTACAGTTTACAAACATCTCACAAGAAACGAGTGACCACTATCAATTGGCAAGATGATTCCATTCCCAACCACATACCATACCACATGCACATCAATTGCATTTAGCAGTATCATTGTTATTACCTTGTGAAACAACATGGCGACACTTCCATGTGAATGTACAATGTCATAAGTTAATGATTAAAAAATTTCGATCTATTATCTTTACTAAATAATAGAGTATGGACAGGCAAAACTTCAAAGAAGGCAGGAGCTAAAGTGTTCAGGAGTAAAGGCACGTCTGAAGAGAAGGAAATGCATGATCCTTCACCGCCACCAGCTGCAGATTTCAAGTTGGTTCGACCACCCTCTAAATTTGTGAAGAGATCACCAATCCCTCCTAAAGTTGATGCATCTCAGGCCATAGCTGAAAGCAGAGAGTTGAAGTTCCCAAGTATAGAGAATATGAAACTTGCCGAGCTAAAAGCACTAGCAAAATCTAGAGGAATTAAGGGTTACTCCAAATTGAAGAAAAATGAGCTCATGGAAATCCTGAGATCCTAAATCACGTCACCGCATTTTGAGGAGAAACCATCGATCTCCTCTATTTTCATTTTTTTTCTTTTTCCTTTGGTGTTCCTCTTTCTACTTGTTTCACATGTTTTTAATAACAAAATTGCAAGCTGGTCTTCTAGTGGATCATAACATTCAAAAACCTCTGTTCATACATTAAACCATTAACGACCTAGTAGAATTTAATTCCCAAAAAAATTATT

mRNA sequence

GCGTTGTCCGATTCTCTTCCTTAACTTTTGAACTTCTTCCCATTTCTCTGCCTCTGCATAGATGTTCGCCAAGAGTACATAATAGCCAGTGTTTTCTGGTTCTAGCTCGAAGATTCGTTCAGCAACTTTCTCTGCTAGTTTGACATCATGGTGTATCCTGCATCCACACAACAATGCACCCCAGATGGTGGCATCTGGTTTGATTGGCATCGTTTGGATGAATTTATGTGCCTTCACCAGATTCCCGGTTCGGGCAAGAAGATCCACCATACATGCATAGTGCTCTAGGTTGGGTTCAATCTGACATTCTTTCTTCATAATACTGAAAATTTTCCATCCTTCATCAAGCAATCCAGAATGGCTGCAGGCATAAAGGATTGAAATGAAGGAAACTTCATCGGGCTTAATCCCAGTCATTCTCATCTGATTAAAGGTATTGATAGCTTCGCTACCAAAGCCATGCATCCCATATCCAGCTATCATCACTGTCCATGAGACTAGGTCCTTATTGAGAATCATATCAAAGAATGATCGGGCGAGAACTAATAGCCCGCACTTCACATACATATCGAGAAGTGCATTAACGACAAATTTGTCTTCAGAATATCCGTTTCTTAATGCATATCCATGGATTTCTCTACCTCTGTCCAAAGCTGCAAGGCTCGCACAGGCAGGAAGGATGCACGCAACTGTTGTGCCATCGGGCTTTGATTCGCTTTGCATCTCTGCAAACAAGGTTTCCGTTAATAGCACAAGCATGAAGAATGCTTGTAACAGCATAGACATCTGGGACAACGCCTCTGCTTTTCATTTCATCAAACAACTTGATTGCACCATCGGACAGACCTTCACGAACATAGCCGGTGATCATCGAAGTCCAAGATACAACAGTTTTCTCATCCATTCTCTCAAAAACTCGAATGGCACTGTTCAAATCCCCACATTTTGAGTACATGTCCAATAAAGTATTATTGAACCTAACTTCTCTGTCAAGAGCAGCAGCCTTTATTGAATAAGAATGAAGTACCTTTCCGAACAAAAGAGTGCCTGTATTTGCACAAGCTACAAGCACATTAACCATTGTAGCCAAATCAATTTCAACACCGAAAACCAACATCTTTATGAAAATCTCAATTCCTCTGTCATCTAAACCATTCTTAACATAGCCACTGATCATAGAGTTCCATGAAATGACATCTCGGTCAGTCAATTCATCGAACAGCTTCTGTGCACATCTAACCTTTCTACCAACAAAGTAGAATGAAATTAATGAATTTACGACTGTGTTATAAGAATTATAACCCAATTTATAGATCAACCCATGAACCTGCCTACCCTCTTCCACACGTGCAACTGCTGCGAAACACTTCAAAACACTAGAAAATGTATATGAATTAGGTTTTATCCCCAACTCCAGCATTTGCTTGAACAAATTTATACTCTCTCCATAGTTACCATTTCCTAAATACTCACTAATCATAAGGTTCCAGATAAAAACCTTACTTTCAGAAAGTTTATCAAAAATCATCCTCCCTTCTTTTAGATCCCCACATTTAACATACATAAAAACTAGTTTCACCCCCAAGATTCCATCTATTATAACCCCACTAGATTCAATTATTGAATGAACCCTTCTTCCATCTCGTATAGATTTTCGTTCAGCACATAGCTGCAAGATGGAGCAAAAAGCATCCAAGTCAAAGTTGGAATTTTGGGAACTGCAAAGAAGCTCCATAGCATTTTTGAGATCTCCCACTTCACAAAACTCGACAATTTTGCGGGAACTATCCAGTTCAACATCCATATAGCTTTTCGTTTCCATTGCTGGGGCATAGGCCAAACTTGAAAAGGAAAGTTTCGAATTCGGTTTGGCAAAAAGAAAAGATTGCCGGAATTTCAAGTTCACTGAGCCACGATGATCGTGCCCGGCCGGAGATAGCCAAAAGGTTACAGGGGCTTTTGCTGTCAGTAACATCATGCCTTTCGCCGAGGAGCCTCGGTAAGAAACAACATAAAGGGTAACGAAATTTCGCTATTATAGAAAGAGAAAGCAATAGTGGGGACAAATGAACAGAAAGAATGGATAGTGAGATGTCCACGTGGGAACACGATCTTCAGAAGCTAAATGGCCCATCAGTGAATTGGCATTAAAGAGGAACCGACCTATATAACATACACAGCTTGTGGATATGATGCAATTTGGATATTCATAGAATTTCATTTTTCTAGGGAAAATCAGATGGAAGCAGTAGTTTTCCTGCCTCGTATTCAAATCCGCTTTCCCAATTTAATCTCTTTGAGAAGAAGACCCACGTTCGCTTCGAAAGACATTGCAGATGTTTACCCCAGTAAGAACATTCAACTATCTGTTTCGAACAATAGGCCAGATGGGAATGCTGGGAATGCCAGAAATCGACCTCCTCGTAGAAACTCTTTGCCAGGGAAAACGAGGAAGAGTGAATCTTCTTCGAGGAAAAAAGAAGCCCCCAAGAATGAGGAAAACATAAAAAAATCAAAACCCAATGACCAGGAGGAAATAATTGCTCTGTTCAGAAAGATTCAGGCTTCTATTGCTAAGGAATCGGCAAGCTCCATTGATGAAGAATCCCACAAGGATGAACATGGAGCCACGTCTATTCTAGAGACCCTTCGTGAACCAAGAAAGCAGTTAAAAGGCAAAACTTCAAAGAAGGCAGGAGCTAAAGTGTTCAGGAGTAAAGGCACGTCTGAAGAGAAGGAAATGCATGATCCTTCACCGCCACCAGCTGCAGATTTCAAGTTGGTTCGACCACCCTCTAAATTTGTGAAGAGATCACCAATCCCTCCTAAAGTTGATGCATCTCAGGCCATAGCTGAAAGCAGAGAGTTGAAGTTCCCAAGTATAGAGAATATGAAACTTGCCGAGCTAAAAGCACTAGCAAAATCTAGAGGAATTAAGGGTTACTCCAAATTGAAGAAAAATGAGCTCATGGAAATCCTGAGATCCTAAATCACGTCACCGCATTTTGAGGAGAAACCATCGATCTCCTCTATTTTCATTTTTTTTCTTTTTCCTTTGGTGTTCCTCTTTCTACTTGTTTCACATGTTTTTAATAACAAAATTGCAAGCTGGTCTTCTAGTGGATCATAACATTCAAAAACCTCTGTTCATACATTAAACCATTAACGACCTAGTAGAATTTAATTCCCAAAAAAATTATT

Coding sequence (CDS)

ATGGAAGCAGTAGTTTTCCTGCCTCGTATTCAAATCCGCTTTCCCAATTTAATCTCTTTGAGAAGAAGACCCACGTTCGCTTCGAAAGACATTGCAGATGTTTACCCCAGTAAGAACATTCAACTATCTGTTTCGAACAATAGGCCAGATGGGAATGCTGGGAATGCCAGAAATCGACCTCCTCGTAGAAACTCTTTGCCAGGGAAAACGAGGAAGAGTGAATCTTCTTCGAGGAAAAAAGAAGCCCCCAAGAATGAGGAAAACATAAAAAAATCAAAACCCAATGACCAGGAGGAAATAATTGCTCTGTTCAGAAAGATTCAGGCTTCTATTGCTAAGGAATCGGCAAGCTCCATTGATGAAGAATCCCACAAGGATGAACATGGAGCCACGTCTATTCTAGAGACCCTTCGTGAACCAAGAAAGCAGTTAAAAGGCAAAACTTCAAAGAAGGCAGGAGCTAAAGTGTTCAGGAGTAAAGGCACGTCTGAAGAGAAGGAAATGCATGATCCTTCACCGCCACCAGCTGCAGATTTCAAGTTGGTTCGACCACCCTCTAAATTTGTGAAGAGATCACCAATCCCTCCTAAAGTTGATGCATCTCAGGCCATAGCTGAAAGCAGAGAGTTGAAGTTCCCAAGTATAGAGAATATGAAACTTGCCGAGCTAAAAGCACTAGCAAAATCTAGAGGAATTAAGGGTTACTCCAAATTGAAGAAAAATGAGCTCATGGAAATCCTGAGATCCTAA

Protein sequence

MEAVVFLPRIQIRFPNLISLRRRPTFASKDIADVYPSKNIQLSVSNNRPDGNAGNARNRPPRRNSLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSIDEESHKDEHGATSILETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFKLVRPPSKFVKRSPIPPKVDASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKKNELMEILRS

Homology

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BLAST of Cmc12g0330261 vs. NCBI nr
Match: XP_008446702.1 (PREDICTED: SAP-like protein BP-73 [Cucumis melo] >KAA0057053.1 SAP-like protein BP-73 [Cucumis melo var. makuwa])

HSP 1 Score: 396.0 bits (1016), Expect = 2.4e-106
Identity = 222/245 (90.61%), Postives = 228/245 (93.06%), Query Frame = 0


Query: 5   VFLPRIQIRFPNLISLRRRPTFASKDIADVYPSKNIQLSVSNNRPDGNAGNARNRPPRRN 64
           +F  +  +RF +L++L         DIADVYPSKNIQLSVSNNRPD   GNARNRPPRRN
Sbjct: 41  LFEKKTHVRFESLLNL--------ADIADVYPSKNIQLSVSNNRPD---GNARNRPPRRN 100

Query: 65  SLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSIDEESH 124
           SLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSIDEESH
Sbjct: 101 SLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSIDEESH 160

Query: 125 KDEHGATSILETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFKLVRP 184
           KDEHGATSILETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFKLVRP
Sbjct: 161 KDEHGATSILETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFKLVRP 220

Query: 185 PSKFVKRSPIPPKVDASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKKNELM 244
           PSKFVKRSPIPPKVDASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKKNELM
Sbjct: 221 PSKFVKRSPIPPKVDASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKKNELM 274

Query: 245 EILRS 250
           EILRS
Sbjct: 281 EILRS 274

[Close]

BLAST of Cmc12g0330261 vs. NCBI nr
Match: KGN65614.1 (hypothetical protein Csa_019894 [Cucumis sativus])

HSP 1 Score: 390.6 bits (1002), Expect = 1.0e-104
Identity = 220/249 (88.35%), Postives = 228/249 (91.57%), Query Frame = 0


Query: 1   MEAVVFLPRIQIRFPNLISLRRRPTFASKDIADVYPSKNIQLSVSNNRPDGNAGNARNRP 60
           MEAVVFLPRI IRFPNLISLRRRPTFASKD+ADVYPSKNIQ SVS +RPDGNAG   NRP
Sbjct: 1   MEAVVFLPRILIRFPNLISLRRRPTFASKDVADVYPSKNIQPSVSKSRPDGNAG---NRP 60

Query: 61  PRRNSLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSID 120
           PRRNSLPGK RKSESSSRK E PK+EE++KKS+ NDQEE+IALFRKIQ SIAKESASSID
Sbjct: 61  PRRNSLPGKARKSESSSRKTETPKDEESVKKSETNDQEEVIALFRKIQTSIAKESASSID 120

Query: 121 EESHKDEHGATSILETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFK 180
           EES KDE+   SILETLRE RKQLKGKTSKKAGAKV RSKG SEEKEMHDPSPPPAADFK
Sbjct: 121 EESRKDEN--ASILETLRESRKQLKGKTSKKAGAKVLRSKGKSEEKEMHDPSPPPAADFK 180

Query: 181 LVRPPSKFVKRSPIPPKVDASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKK 240
           LVRPPSKFVKRSPIP KVDASQAIAESRELKFPS ENMKL ELKALAKSRGIKGYSKLKK
Sbjct: 181 LVRPPSKFVKRSPIPLKVDASQAIAESRELKFPSTENMKLTELKALAKSRGIKGYSKLKK 240

Query: 241 NELMEILRS 250
           NELMEILRS
Sbjct: 241 NELMEILRS 244

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BLAST of Cmc12g0330261 vs. NCBI nr
Match: XP_038893912.1 (SAP-like protein BP-73 isoform X3 [Benincasa hispida])

HSP 1 Score: 351.3 bits (900), Expect = 6.9e-93
Identity = 206/262 (78.63%), Postives = 223/262 (85.11%), Query Frame = 0


Query: 1   MEAVVFLPRIQIRFPNLISLRRRPTFASKDIADVYPSKNIQLSVSNNRPDGNAGNARNRP 60
           MEAV+F PRI IRFP L+SL RRPTFASKDIADVYPSK IQLSVSNNRPDG AG   NRP
Sbjct: 1   MEAVIFQPRILIRFPKLVSLGRRPTFASKDIADVYPSKGIQLSVSNNRPDGKAG---NRP 60

Query: 61  PRRNSLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSID 120
           PRR S PGKTRK+E SSRK EA  NEE++KKSK N+QEEIIALFRKI+ SIAKESASS D
Sbjct: 61  PRRISAPGKTRKNEPSSRKTEAHMNEEDLKKSKYNNQEEIIALFRKIETSIAKESASSND 120

Query: 121 EESHKDEHGATSILETLREPRKQLK----GKTSKKAGAKVFRSKGTSEEKEMHDPSPPPA 180
           EES KDEHGA SILETLRE RKQ+K    GK+SKKAGAK  RS+GTSEEKE+HDPS PPA
Sbjct: 121 EESCKDEHGAESILETLRESRKQVKELWTGKSSKKAGAKALRSEGTSEEKEIHDPS-PPA 180

Query: 181 ADFKLVRPPSKFVKRSPIP---------PKVDASQAIAESRELKFPSIENMKLAELKALA 240
           ADF+LVRPPSKFVKRSPIP         P+VDA+QAIAESRELKFPSI+NMKL ELKALA
Sbjct: 181 ADFQLVRPPSKFVKRSPIPSPPRGNGSHPRVDATQAIAESRELKFPSIKNMKLTELKALA 240

Query: 241 KSRGIKGYSKLKKNELMEILRS 250
           KSRGIKGYSKLKKNEL+E+L S
Sbjct: 241 KSRGIKGYSKLKKNELIELLGS 258

[Close]

BLAST of Cmc12g0330261 vs. NCBI nr
Match: XP_038893911.1 (SAP-like protein BP-73 isoform X2 [Benincasa hispida])

HSP 1 Score: 344.7 bits (883), Expect = 6.5e-91
Identity = 206/279 (73.84%), Postives = 223/279 (79.93%), Query Frame = 0


Query: 1   MEAVVFLPRIQIRFPNLISLRRRPTFASK---------------------DIADVYPSKN 60
           MEAV+F PRI IRFP L+SL RRPTFASK                     DIADVYPSK 
Sbjct: 1   MEAVIFQPRILIRFPKLVSLGRRPTFASKGIEPEIVLNFANPLFNLLNLADIADVYPSKG 60

Query: 61  IQLSVSNNRPDGNAGNARNRPPRRNSLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEE 120
           IQLSVSNNRPDG AG   NRPPRR S PGKTRK+E SSRK EA  NEE++KKSK N+QEE
Sbjct: 61  IQLSVSNNRPDGKAG---NRPPRRISAPGKTRKNEPSSRKTEAHMNEEDLKKSKYNNQEE 120

Query: 121 IIALFRKIQASIAKESASSIDEESHKDEHGATSILETLREPRKQLKGKTSKKAGAKVFRS 180
           IIALFRKI+ SIAKESASS DEES KDEHGA SILETLRE RKQ+KGK+SKKAGAK  RS
Sbjct: 121 IIALFRKIETSIAKESASSNDEESCKDEHGAESILETLRESRKQVKGKSSKKAGAKALRS 180

Query: 181 KGTSEEKEMHDPSPPPAADFKLVRPPSKFVKRSPIP---------PKVDASQAIAESREL 240
           +GTSEEKE+HDPS PPAADF+LVRPPSKFVKRSPIP         P+VDA+QAIAESREL
Sbjct: 181 EGTSEEKEIHDPS-PPAADFQLVRPPSKFVKRSPIPSPPRGNGSHPRVDATQAIAESREL 240

Query: 241 KFPSIENMKLAELKALAKSRGIKGYSKLKKNELMEILRS 250
           KFPSI+NMKL ELKALAKSRGIKGYSKLKKNEL+E+L S
Sbjct: 241 KFPSIKNMKLTELKALAKSRGIKGYSKLKKNELIELLGS 275

[Close]

BLAST of Cmc12g0330261 vs. NCBI nr
Match: XP_011648505.1 (uncharacterized protein LOC105434499, partial [Cucumis sativus])

HSP 1 Score: 341.3 bits (874), Expect = 7.2e-90
Identity = 197/245 (80.41%), Postives = 211/245 (86.12%), Query Frame = 0


Query: 5   VFLPRIQIRFPNLISLRRRPTFASKDIADVYPSKNIQLSVSNNRPDGNAGNARNRPPRRN 64
           +F  +  +RF +L++L         D+ADVYPSKNIQ SVS +RPDGNAG   NRPPRRN
Sbjct: 34  LFEKKTHVRFESLLNL--------ADVADVYPSKNIQPSVSKSRPDGNAG---NRPPRRN 93

Query: 65  SLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSIDEESH 124
           SLPGK RKSESSSRK E PK+EE++KKS+ NDQEE+IALFRKIQ SIAKESASSIDEES 
Sbjct: 94  SLPGKARKSESSSRKTETPKDEESVKKSETNDQEEVIALFRKIQTSIAKESASSIDEESR 153

Query: 125 KDEHGATSILETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFKLVRP 184
           KDE+   SILETLRE RKQLKGKTSKKAGAKV RSKG SEEKEMHDPSPPPAADFKLVRP
Sbjct: 154 KDEN--ASILETLRESRKQLKGKTSKKAGAKVLRSKGKSEEKEMHDPSPPPAADFKLVRP 213

Query: 185 PSKFVKRSPIPPKVDASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKKNELM 244
           PSKFVKRSPIP KVDASQAIAESRELKFPS ENMKL ELKALAKSRGIKGYSKLKKNELM
Sbjct: 214 PSKFVKRSPIPLKVDASQAIAESRELKFPSTENMKLTELKALAKSRGIKGYSKLKKNELM 265

Query: 245 EILRS 250
           EILRS
Sbjct: 274 EILRS 265

[Close]

BLAST of Cmc12g0330261 vs. ExPASy Swiss-Prot
Match: Q94K75 (Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RHON1 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 6.2e-04
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 199 DASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKKNELMEILRS 250
           DA +   E+ E     +  +KL EL+ +AKSRG+KG SK+KK EL+E+L S
Sbjct: 348 DADEDSDEAEEEAVKDLSELKLVELRGIAKSRGLKGLSKMKKAELVELLGS 398

[Close]

BLAST of Cmc12g0330261 vs. ExPASy TrEMBL
Match: A0A5A7UMB7 (SAP-like protein BP-73 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002410 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.2e-106
Identity = 222/245 (90.61%), Postives = 228/245 (93.06%), Query Frame = 0


Query: 5   VFLPRIQIRFPNLISLRRRPTFASKDIADVYPSKNIQLSVSNNRPDGNAGNARNRPPRRN 64
           +F  +  +RF +L++L         DIADVYPSKNIQLSVSNNRPD   GNARNRPPRRN
Sbjct: 41  LFEKKTHVRFESLLNL--------ADIADVYPSKNIQLSVSNNRPD---GNARNRPPRRN 100

Query: 65  SLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSIDEESH 124
           SLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSIDEESH
Sbjct: 101 SLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSIDEESH 160

Query: 125 KDEHGATSILETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFKLVRP 184
           KDEHGATSILETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFKLVRP
Sbjct: 161 KDEHGATSILETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFKLVRP 220

Query: 185 PSKFVKRSPIPPKVDASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKKNELM 244
           PSKFVKRSPIPPKVDASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKKNELM
Sbjct: 221 PSKFVKRSPIPPKVDASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKKNELM 274

Query: 245 EILRS 250
           EILRS
Sbjct: 281 EILRS 274

[Close]

BLAST of Cmc12g0330261 vs. ExPASy TrEMBL
Match: A0A1S3BFQ9 (SAP-like protein BP-73 OS=Cucumis melo OX=3656 GN=LOC103489342 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.2e-106
Identity = 222/245 (90.61%), Postives = 228/245 (93.06%), Query Frame = 0


Query: 5   VFLPRIQIRFPNLISLRRRPTFASKDIADVYPSKNIQLSVSNNRPDGNAGNARNRPPRRN 64
           +F  +  +RF +L++L         DIADVYPSKNIQLSVSNNRPD   GNARNRPPRRN
Sbjct: 41  LFEKKTHVRFESLLNL--------ADIADVYPSKNIQLSVSNNRPD---GNARNRPPRRN 100

Query: 65  SLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSIDEESH 124
           SLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSIDEESH
Sbjct: 101 SLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSIDEESH 160

Query: 125 KDEHGATSILETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFKLVRP 184
           KDEHGATSILETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFKLVRP
Sbjct: 161 KDEHGATSILETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFKLVRP 220

Query: 185 PSKFVKRSPIPPKVDASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKKNELM 244
           PSKFVKRSPIPPKVDASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKKNELM
Sbjct: 221 PSKFVKRSPIPPKVDASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKKNELM 274

Query: 245 EILRS 250
           EILRS
Sbjct: 281 EILRS 274

[Close]

BLAST of Cmc12g0330261 vs. ExPASy TrEMBL
Match: A0A0A0LX66 (Rho_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G470300 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 5.0e-105
Identity = 220/249 (88.35%), Postives = 228/249 (91.57%), Query Frame = 0


Query: 1   MEAVVFLPRIQIRFPNLISLRRRPTFASKDIADVYPSKNIQLSVSNNRPDGNAGNARNRP 60
           MEAVVFLPRI IRFPNLISLRRRPTFASKD+ADVYPSKNIQ SVS +RPDGNAG   NRP
Sbjct: 1   MEAVVFLPRILIRFPNLISLRRRPTFASKDVADVYPSKNIQPSVSKSRPDGNAG---NRP 60

Query: 61  PRRNSLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSID 120
           PRRNSLPGK RKSESSSRK E PK+EE++KKS+ NDQEE+IALFRKIQ SIAKESASSID
Sbjct: 61  PRRNSLPGKARKSESSSRKTETPKDEESVKKSETNDQEEVIALFRKIQTSIAKESASSID 120

Query: 121 EESHKDEHGATSILETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFK 180
           EES KDE+   SILETLRE RKQLKGKTSKKAGAKV RSKG SEEKEMHDPSPPPAADFK
Sbjct: 121 EESRKDEN--ASILETLRESRKQLKGKTSKKAGAKVLRSKGKSEEKEMHDPSPPPAADFK 180

Query: 181 LVRPPSKFVKRSPIPPKVDASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKK 240
           LVRPPSKFVKRSPIP KVDASQAIAESRELKFPS ENMKL ELKALAKSRGIKGYSKLKK
Sbjct: 181 LVRPPSKFVKRSPIPLKVDASQAIAESRELKFPSTENMKLTELKALAKSRGIKGYSKLKK 240

Query: 241 NELMEILRS 250
           NELMEILRS
Sbjct: 241 NELMEILRS 244

[Close]

BLAST of Cmc12g0330261 vs. ExPASy TrEMBL
Match: A0A6J1CGN3 (uncharacterized protein LOC111010657 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010657 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 9.8e-69
Identity = 168/260 (64.62%), Postives = 199/260 (76.54%), Query Frame = 0


Query: 1   MEAVVFLPRIQIRFPNLISLRRRPTFASKDIADVYPSKNIQLSVSNNRPDGNAGNARNRP 60
           MEAVVF  R  +RFPNL+S  RRP FA K+IA V  SK IQ+SV++N      GNA  RP
Sbjct: 1   MEAVVFQSR-TLRFPNLVSFGRRPIFALKEIAAVNSSKGIQVSVTSN----GGGNAGQRP 60

Query: 61  PRRNSLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSID 120
           PRR+S PG+TRK+E +  + EA    E++K  K N+QEEIIALFRKIQ SIAK+SA++ D
Sbjct: 61  PRRSSGPGRTRKNEPN--RNEA---AEDLKNPKSNNQEEIIALFRKIQTSIAKDSATTKD 120

Query: 121 EESHKDEHGATSILETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFK 180
           E+SH+DE GA SILE+LRE RKQ+KG+TSKKAG KV R KG SEE EM+  S  PAA+FK
Sbjct: 121 EDSHEDEIGAESILESLRESRKQVKGRTSKKAGVKVLRRKGISEEPEMYHTS--PAAEFK 180

Query: 181 LVRPPSKFVKRSPIPP-----------KVDASQAIAESRELKFPSIENMKLAELKALAKS 240
           LVRPPSKFVKRSPIP            + + SQAIAESRE+KFPS+ENMKL ELKA+AKS
Sbjct: 181 LVRPPSKFVKRSPIPSPPGRNGSRSQLREEPSQAIAESREMKFPSVENMKLTELKAVAKS 240

Query: 241 RGIKGYSKLKKNELMEILRS 250
           RGIKGYSKLKKNEL+E+LRS
Sbjct: 241 RGIKGYSKLKKNELLELLRS 248

[Close]

BLAST of Cmc12g0330261 vs. ExPASy TrEMBL
Match: A0A6J1CF22 (uncharacterized protein LOC111010657 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010657 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 8.3e-60
Identity = 154/256 (60.16%), Postives = 187/256 (73.05%), Query Frame = 0


Query: 5   VFLPRIQIRFPNLISLRRRPTFASKDIADVYPSKNIQLSVSNNRPDGNAGNARNRPPRRN 64
           +F      RF +L++L         +IA V  SK IQ+SV++N      GNA  RPPRR+
Sbjct: 33  LFWKETHFRFESLLNL--------AEIAAVNSSKGIQVSVTSN----GGGNAGQRPPRRS 92

Query: 65  SLPGKTRKSESSSRKKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSIDEESH 124
           S PG+TRK+E +  + EA    E++K  K N+QEEIIALFRKIQ SIAK+SA++ DE+SH
Sbjct: 93  SGPGRTRKNEPN--RNEA---AEDLKNPKSNNQEEIIALFRKIQTSIAKDSATTKDEDSH 152

Query: 125 KDEHGATSILETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFKLVRP 184
           +DE GA SILE+LRE RKQ+KG+TSKKAG KV R KG SEE EM+  S  PAA+FKLVRP
Sbjct: 153 EDEIGAESILESLRESRKQVKGRTSKKAGVKVLRRKGISEEPEMYHTS--PAAEFKLVRP 212

Query: 185 PSKFVKRSPIPP-----------KVDASQAIAESRELKFPSIENMKLAELKALAKSRGIK 244
           PSKFVKRSPIP            + + SQAIAESRE+KFPS+ENMKL ELKA+AKSRGIK
Sbjct: 213 PSKFVKRSPIPSPPGRNGSRSQLREEPSQAIAESREMKFPSVENMKLTELKAVAKSRGIK 269

Query: 245 GYSKLKKNELMEILRS 250
           GYSKLKKNEL+E+LRS
Sbjct: 273 GYSKLKKNELLELLRS 269

[Close]

BLAST of Cmc12g0330261 vs. TAIR 10
Match: AT4G18740.1 (Rho termination factor )

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-18
Identity = 71/188 (37.77%), Postives = 104/188 (55.32%), Query Frame = 0


Query: 79  KKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSIDEESHKDEHG-----ATSI 138
           KK + +   N  KS   +QEEII+L ++IQ+SI+K  +  ++EE + DE         +I
Sbjct: 80  KKPSDRRTSNPSKS---NQEEIISLLKRIQSSISKGESRGVEEEKNSDESSKEKPLTKAI 139

Query: 139 LETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFKLVRPPSKFVKRSP 198
           L+ L + RK+ +G TS K                      PP    +L RPPS FVKR+P
Sbjct: 140 LDVLEKSRKKTEGDTSVK--------------------EKPPKRQVELPRPPSSFVKRTP 199

Query: 199 IP----------PKVDASQAIAE--SRELKFPSIENMKLAELKALAKSRGIKGYSKLKKN 250
           +           P  ++ +A+ +   +E K   IE MKLAELK +AK+RGIKGYSKL+K+
Sbjct: 200 LSSSASGPRGKLPVSNSDKALGKLTKKEEKASLIETMKLAELKEVAKNRGIKGYSKLRKS 244

[Close]

BLAST of Cmc12g0330261 vs. TAIR 10
Match: AT4G18740.2 (Rho termination factor )

HSP 1 Score: 76.3 bits (186), Expect = 4.0e-14
Identity = 61/176 (34.66%), Postives = 89/176 (50.57%), Query Frame = 0


Query: 79  KKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSIDEESHKDEHG-----ATSI 138
           KK + +   N  KS   +QEEII+L ++IQ+SI+K  +  ++EE + DE         +I
Sbjct: 80  KKPSDRRTSNPSKS---NQEEIISLLKRIQSSISKGESRGVEEEKNSDESSKEKPLTKAI 139

Query: 139 LETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFKLVRPPSKFVKRSP 198
           L+ L + RK+ +G TS K                      PP    +L RPPS FVKR+P
Sbjct: 140 LDVLEKSRKKTEGDTSVK--------------------EKPPKRQVELPRPPSSFVKRTP 199

Query: 199 IPPKVDASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKKNELMEILRS 250
           +       +                   ELK +AK+RGIKGYSKL+K+EL+E++RS
Sbjct: 200 LSSSASGPR-------------------ELKEVAKNRGIKGYSKLRKSELLELIRS 213

[Close]

BLAST of Cmc12g0330261 vs. TAIR 10
Match: AT4G18740.3 (Rho termination factor )

HSP 1 Score: 76.3 bits (186), Expect = 4.0e-14
Identity = 61/176 (34.66%), Postives = 89/176 (50.57%), Query Frame = 0


Query: 79  KKEAPKNEENIKKSKPNDQEEIIALFRKIQASIAKESASSIDEESHKDEHG-----ATSI 138
           KK + +   N  KS   +QEEII+L ++IQ+SI+K  +  ++EE + DE         +I
Sbjct: 55  KKPSDRRTSNPSKS---NQEEIISLLKRIQSSISKGESRGVEEEKNSDESSKEKPLTKAI 114

Query: 139 LETLREPRKQLKGKTSKKAGAKVFRSKGTSEEKEMHDPSPPPAADFKLVRPPSKFVKRSP 198
           L+ L + RK+ +G TS K                      PP    +L RPPS FVKR+P
Sbjct: 115 LDVLEKSRKKTEGDTSVK--------------------EKPPKRQVELPRPPSSFVKRTP 174

Query: 199 IPPKVDASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKKNELMEILRS 250
           +       +                   ELK +AK+RGIKGYSKL+K+EL+E++RS
Sbjct: 175 LSSSASGPR-------------------ELKEVAKNRGIKGYSKLRKSELLELIRS 188

[Close]

BLAST of Cmc12g0330261 vs. TAIR 10
Match: AT1G06190.1 (Rho termination factor )

HSP 1 Score: 46.2 bits (108), Expect = 4.4e-05
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 199 DASQAIAESRELKFPSIENMKLAELKALAKSRGIKGYSKLKKNELMEILRS 250
           DA +   E+ E     +  +KL EL+ +AKSRG+KG SK+KK EL+E+L S
Sbjct: 348 DADEDSDEAEEEAVKDLSELKLVELRGIAKSRGLKGLSKMKKAELVELLGS 398

The following BLAST results are available for this feature:

BLAST of Cmc12g0330261 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446702.1	2.4e-106	90.61	PREDICTED: SAP-like protein BP-73 [Cucumis melo] >KAA0057053.1 SAP-like protein ...	[more]
KGN65614.1	1.0e-104	88.35	hypothetical protein Csa_019894 [Cucumis sativus]	[more]
XP_038893912.1	6.9e-93	78.63	SAP-like protein BP-73 isoform X3 [Benincasa hispida]	[more]
XP_038893911.1	6.5e-91	73.84	SAP-like protein BP-73 isoform X2 [Benincasa hispida]	[more]
XP_011648505.1	7.2e-90	80.41	uncharacterized protein LOC105434499, partial [Cucumis sativus]	[more]

BLAST of Cmc12g0330261 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94K75	6.2e-04	47.06	Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Cmc12g0330261 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UMB7	1.2e-106	90.61	SAP-like protein BP-73 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9...	[more]
A0A1S3BFQ9	1.2e-106	90.61	SAP-like protein BP-73 OS=Cucumis melo OX=3656 GN=LOC103489342 PE=4 SV=1	[more]
A0A0A0LX66	5.0e-105	88.35	Rho_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G470300 PE=4 ...	[more]
A0A6J1CGN3	9.8e-69	64.62	uncharacterized protein LOC111010657 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CF22	8.3e-60	60.16	uncharacterized protein LOC111010657 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Cmc12g0330261 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18740.1	1.2e-18	37.77	Rho termination factor	[more]
AT4G18740.2	4.0e-14	34.66	Rho termination factor	[more]
AT4G18740.3	4.0e-14	34.66	Rho termination factor	[more]
AT1G06190.1	4.4e-05	47.06	Rho termination factor	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.720.10		coord: 204..249 e-value: 4.5E-7 score: 31.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..100
None	No IPR available	PANTHER	PTHR34449	RHO TERMINATION FACTOR	coord: 1..249
None	No IPR available	PANTHER	PTHR34449:SF2	RHO TERMINATION FACTOR	coord: 1..249
IPR011112	Rho termination factor, N-terminal	PFAM	PF07498	Rho_N	coord: 216..247 e-value: 6.2E-9 score: 35.6
IPR036269	Rho termination factor, N-terminal domain superfamily	SUPERFAMILY	68912	Rho N-terminal domain-like	coord: 212..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0330261.1	Cmc12g0330261.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination