Cmc12g0330211 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0330211
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Cupin type-1 domain-containing protein
Location	CMiso1.1chr12: 21277428 .. 21278278 (+)
RNA-Seq Expression	Cmc12g0330211
Synteny	Cmc12g0330211

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACCATATTACCCTCAGAACAATAAGTCTAGAATGGCATTTTAGTCATTTTACATTCATCCATCTAAAACTCGGTTATTAATACTCATTTCCAAGCTCCGTTGAGTTCTTGGGCGTCGAATACAATACACCAATGGAAGGCCAGCAGGTTTTCGAGAATTTCGATTCTCTCTGGTTCTTCTCTACCGTATTCTCCAACAGGACGCCACCGGTCGTTGAAAAGCCCATTCAAAACGACTTCGTTGAGCCTCTCGGAGAAGAAATTGCGACACCCATCACTCGAAATGAGGAAAATGATGTTGGTGAAGAGAAGGAGATGGAAACAGAGGAGATGGAAGAGAAGAGGAGAAAGAATAGAGGAAGGAGGAGTTGGGGTTTGGAACAGAGGAGAAAATTTGTTGTTGGAGAGATAGATCTGAGTTATGCTGTGAAGGAGATTTGTGAATGTTGGTCTTTTGAAGAGATGAGGATTGGAGGTGGGAAGAAGACGAAGAAGATGCCATCATTTGAAGATAGTATGGCCATGAAAGAGCATATCAGATCTTGGGCTTATGCAGTGGCTTGCACTGTTAGATGATCACACTAATTTTAACCATTGTTTTGTTTTATGATGTTTTTTCTATGCGAATTTTGTAATCAGATCTGTATTTTGATGAATAAGTTTGTACGAATTTAGTTCTTAACTTTTCTAAAAATAATGTAATCTCCGTTAACCTTCATTTTCTGAAATTTATTCACCTTGTTTTTTATTGTCTTTCAATTTGGTTGTTTGTGTATTGAAAATTTTGTATCTTTCCTATTCTGTGAATGAGAGCGTATACACTTTATCAAGTTTAAATATAGAGTTATAT

mRNA sequence

TTACCATATTACCCTCAGAACAATAAGTCTAGAATGGCATTTTAGTCATTTTACATTCATCCATCTAAAACTCGGTTATTAATACTCATTTCCAAGCTCCGTTGAGTTCTTGGGCGTCGAATACAATACACCAATGGAAGGCCAGCAGGTTTTCGAGAATTTCGATTCTCTCTGGTTCTTCTCTACCGTATTCTCCAACAGGACGCCACCGGTCGTTGAAAAGCCCATTCAAAACGACTTCGTTGAGCCTCTCGGAGAAGAAATTGCGACACCCATCACTCGAAATGAGGAAAATGATGTTGGTGAAGAGAAGGAGATGGAAACAGAGGAGATGGAAGAGAAGAGGAGAAAGAATAGAGGAAGGAGGAGTTGGGGTTTGGAACAGAGGAGAAAATTTGTTGTTGGAGAGATAGATCTGAGTTATGCTGTGAAGGAGATTTGTGAATGTTGGTCTTTTGAAGAGATGAGGATTGGAGGTGGGAAGAAGACGAAGAAGATGCCATCATTTGAAGATAGTATGGCCATGAAAGAGCATATCAGATCTTGGGCTTATGCAGTGGCTTGCACTGTTAGATGATCACACTAATTTTAACCATTGTTTTGTTTTATGATGTTTTTTCTATGCGAATTTTGTAATCAGATCTGTATTTTGATGAATAAGTTTGTACGAATTTAGTTCTTAACTTTTCTAAAAATAATGTAATCTCCGTTAACCTTCATTTTCTGAAATTTATTCACCTTGTTTTTTATTGTCTTTCAATTTGGTTGTTTGTGTATTGAAAATTTTGTATCTTTCCTATTCTGTGAATGAGAGCGTATACACTTTATCAAGTTTAAATATAGAGTTATAT

Coding sequence (CDS)

ATGGAAGGCCAGCAGGTTTTCGAGAATTTCGATTCTCTCTGGTTCTTCTCTACCGTATTCTCCAACAGGACGCCACCGGTCGTTGAAAAGCCCATTCAAAACGACTTCGTTGAGCCTCTCGGAGAAGAAATTGCGACACCCATCACTCGAAATGAGGAAAATGATGTTGGTGAAGAGAAGGAGATGGAAACAGAGGAGATGGAAGAGAAGAGGAGAAAGAATAGAGGAAGGAGGAGTTGGGGTTTGGAACAGAGGAGAAAATTTGTTGTTGGAGAGATAGATCTGAGTTATGCTGTGAAGGAGATTTGTGAATGTTGGTCTTTTGAAGAGATGAGGATTGGAGGTGGGAAGAAGACGAAGAAGATGCCATCATTTGAAGATAGTATGGCCATGAAAGAGCATATCAGATCTTGGGCTTATGCAGTGGCTTGCACTGTTAGATGA

Protein sequence

MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEKEMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEEMRIGGGKKTKKMPSFEDSMAMKEHIRSWAYAVACTVR

Homology

[Close]

BLAST of Cmc12g0330211 vs. NCBI nr
Match: XP_008443476.1 (PREDICTED: uncharacterized protein LOC103487056 [Cucumis melo] >KAA0057057.1 uncharacterized protein E6C27_scaffold96G002450 [Cucumis melo var. makuwa])

HSP 1 Score: 295.8 bits (756), Expect = 2.0e-76
Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60
           MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK
Sbjct: 1   MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60

Query: 61  EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEEMRIGGGKKTK 120
           EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFE MRIGGGKKTK
Sbjct: 61  EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEVMRIGGGKKTK 120

Query: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 148
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of Cmc12g0330211 vs. NCBI nr
Match: XP_011657601.1 (uncharacterized protein LOC101209234 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 7.0e-69
Identity = 134/147 (91.16%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60
           MEGQQV ENFDSLWFF+TVFSNRTPPVV KPIQNDFV  LGEEIATPITRNEEN+V E K
Sbjct: 1   MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAK 60

Query: 61  EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEEMRIGGGKKTK 120
           EMETEE EEKRRKNRG RSWGLEQR+KF+VGEIDLSYAVKEICECWSFEEMRIGGG+KTK
Sbjct: 61  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 120

Query: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 148
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of Cmc12g0330211 vs. NCBI nr
Match: KAE8653211.1 (hypothetical protein Csa_019764 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 7.0e-69
Identity = 134/147 (91.16%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60
           MEGQQV ENFDSLWFF+TVFSNRTPPVV KPIQNDFV  LGEEIATPITRNEEN+V E K
Sbjct: 33  MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAK 92

Query: 61  EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEEMRIGGGKKTK 120
           EMETEE EEKRRKNRG RSWGLEQR+KF+VGEIDLSYAVKEICECWSFEEMRIGGG+KTK
Sbjct: 93  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 152

Query: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 148
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 153 KMPSFEDSMAMKEHIRSWAYAVACTVR 179

[Close]

BLAST of Cmc12g0330211 vs. NCBI nr
Match: XP_038895160.1 (uncharacterized protein LOC120083464 [Benincasa hispida])

HSP 1 Score: 229.2 bits (583), Expect = 2.3e-56
Identity = 122/165 (73.94%), Postives = 134/165 (81.21%), Query Frame = 0


Query: 1   MEGQQVFENFDSLWFFSTVFSNRT-----PPVVEKPIQNDFVEPLGEEIATPITRNEEND 60
           MEGQQV EN+DSLWFF+TVFSNRT     PPVVE P QNDFVEP GEEIATP+T NE+N+
Sbjct: 1   MEGQQVLENWDSLWFFATVFSNRTPPPPPPPVVENPTQNDFVEPPGEEIATPLTPNEQNN 60

Query: 61  VGEEKEMET-------EEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSF 120
           VG+EK++E         E +E+RRKNRGRR WGLEQRRK +VGE+DLSYAVKEICECW F
Sbjct: 61  VGDEKKIENGGGFGIKTEEKEQRRKNRGRRCWGLEQRRK-IVGEMDLSYAVKEICECWLF 120

Query: 121 EEMRIGGG------KKTKKMPSFEDSMAMKEHIRSWAYAVACTVR 148
           EE RIGGG      KKTKKMP FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 EETRIGGGNQYQRKKKTKKMPPFEDSMAMKEHIRSWAYAVACTVR 164

[Close]

BLAST of Cmc12g0330211 vs. NCBI nr
Match: BAD93608.1 (hypothetical protein, partial [Cucumis melo])

HSP 1 Score: 188.7 bits (478), Expect = 3.5e-44
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60
          MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK
Sbjct: 5  MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 64

Query: 61 EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDL 96
          EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDL
Sbjct: 65 EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDL 99

[Close]

BLAST of Cmc12g0330211 vs. ExPASy TrEMBL
Match: A0A5A7UQZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002450 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 9.9e-77
Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60
           MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK
Sbjct: 1   MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60

Query: 61  EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEEMRIGGGKKTK 120
           EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFE MRIGGGKKTK
Sbjct: 61  EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEVMRIGGGKKTK 120

Query: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 148
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of Cmc12g0330211 vs. ExPASy TrEMBL
Match: A0A1S3B8X4 (uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 9.9e-77
Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60
           MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK
Sbjct: 1   MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60

Query: 61  EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEEMRIGGGKKTK 120
           EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFE MRIGGGKKTK
Sbjct: 61  EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEVMRIGGGKKTK 120

Query: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 148
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of Cmc12g0330211 vs. ExPASy TrEMBL
Match: A0A0A0LX63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470250 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.4e-69
Identity = 134/147 (91.16%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60
           MEGQQV ENFDSLWFF+TVFSNRTPPVV KPIQNDFV  LGEEIATPITRNEEN+V E K
Sbjct: 1   MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAK 60

Query: 61  EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEEMRIGGGKKTK 120
           EMETEE EEKRRKNRG RSWGLEQR+KF+VGEIDLSYAVKEICECWSFEEMRIGGG+KTK
Sbjct: 61  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 120

Query: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 148
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of Cmc12g0330211 vs. ExPASy TrEMBL
Match: Q58A15 (Uncharacterized protein 7G02 (Fragment) OS=Cucumis melo OX=3656 GN=7G02 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.7e-44
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60
          MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK
Sbjct: 5  MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 64

Query: 61 EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDL 96
          EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDL
Sbjct: 65 EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDL 99

[Close]

BLAST of Cmc12g0330211 vs. ExPASy TrEMBL
Match: A0A6J1EGY0 (uncharacterized protein LOC111434099 OS=Cucurbita moschata OX=3662 GN=LOC111434099 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.1e-42
Identity = 105/168 (62.50%), Postives = 123/168 (73.21%), Query Frame = 0


Query: 1   MEGQQVFENFDSLWFFSTVFSNRT-PPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEE 60
           ME QQV +N DSLWFF+TVFSNRT PPVV+KP Q+DFVEP G EIATPI +N++N VGEE
Sbjct: 1   MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQN-VGEE 60

Query: 61  KEMETEE-----------MEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSF 120
           + +  E+           + E+RRK+RGRR WG   +R+ +VGE+DLS AVKEICECW  
Sbjct: 61  RNIVDEKTNETGGGLGLIITEERRKSRGRR-WGCLGQRRKIVGEMDLSDAVKEICECWLL 120

Query: 121 EEMRIGGGK---------KTKKMPSFEDSMAMKEHIRSWAYAVACTVR 148
           E+ RIGGG          K KKMP FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 EQ-RIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 165

The following BLAST results are available for this feature:

BLAST of Cmc12g0330211 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443476.1	2.0e-76	99.32	PREDICTED: uncharacterized protein LOC103487056 [Cucumis melo] >KAA0057057.1 unc...	[more]
XP_011657601.1	7.0e-69	91.16	uncharacterized protein LOC101209234 [Cucumis sativus]	[more]
KAE8653211.1	7.0e-69	91.16	hypothetical protein Csa_019764 [Cucumis sativus]	[more]
XP_038895160.1	2.3e-56	73.94	uncharacterized protein LOC120083464 [Benincasa hispida]	[more]
BAD93608.1	3.5e-44	100.00	hypothetical protein, partial [Cucumis melo]	[more]

BLAST of Cmc12g0330211 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc12g0330211 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQZ2	9.9e-77	99.32	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3B8X4	9.9e-77	99.32	uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=...	[more]
A0A0A0LX63	3.4e-69	91.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470250 PE=4 SV=1	[more]
Q58A15	1.7e-44	100.00	Uncharacterized protein 7G02 (Fragment) OS=Cucumis melo OX=3656 GN=7G02 PE=2 SV=...	[more]
A0A6J1EGY0	2.1e-42	62.50	uncharacterized protein LOC111434099 OS=Cucurbita moschata OX=3662 GN=LOC1114340...	[more]

BLAST of Cmc12g0330211 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..79
None	No IPR available	PANTHER	PTHR33785:SF8	SUBFAMILY NOT NAMED	coord: 1..29 coord: 30..147
None	No IPR available	PANTHER	PTHR33785	FAMILY NOT NAMED	coord: 1..29 coord: 30..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0330211.1	Cmc12g0330211.1	mRNA