Cmc12g0329721 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0329721
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description15d_03-C10-like protein
LocationCMiso1.1chr12: 20939788 .. 20942686 (+)
RNA-Seq ExpressionCmc12g0329721
SyntenyCmc12g0329721
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTGTCTCCCTGTCTCTGTTGCTTTGTCTAGGAGGTCGTGCGGTGTAACAAAACAACCCCACTCTCACCCCCTTCTCCCCCGCTTCTTCAATCGCCATTTTCCTTAAACCCCAAATCCCCTTCTACCCTCTTCTTTCTTCCTTTTTCATTTCCCTCTGTCAAATTTTAGGGTTCAAAATGTTCTCCTCTCTTTTCCATGCTCAACTCCTATCCAACCATGCCGTTTCCTGCACTTCTTTGGAGTTTACCAAGCGCTGCTTCATACCCCCAAGGTAGTTTTTTTCTTAATGTCTTTGAAAATTTTTCGTCTTTCGATTAACTGCATTTGTTGTTTTGGTCCTGTTGTTTTCGGATTCTTACTTACTTTTGTTTTTGAAAGTTGAGATTTTGGGGTTTTGGGTTCTGGTTAGGTTTCTTTTTTTTCTTTTTTTCTTTTTTTCTTTTTTTCTTTTTTTTTTAAAAGAGGATTTGGTTTTCGTCATTTGAGGTTGTTTTGTTTGAGGTTTTAACTGTTTGATTAAATGTTAAGGATGAAGAGAAAGTTGTTGCTATTGTAGTTTGGCGGAGTGCTTATGACATTTCGTGTGTGTGGATTTATGGTGTTTTTTTATTTTATATCATGATTTCTGTTTGTTCATGTTTGAAATGCTTGGAGCTGAATTGGGTGTTGAATTTAACAATTTTTTCGTTGTTGTTGTTGGTTTTGATTTATTTGATTGATGTCATTGGACATTCGGGGATATCTGCCCTACTGCTTCTGATTGTATAAATAATTTTTTATGCTCATCTTTAAAAGGAATATGAGGTCGCTAGGAGAAAACGATGTGATTGGTTGGGAATTGGGGCAATTTTTACCCACTTTACTTGTAGAGCTTCAGACGACTCCAAAGTCTATGGAATGGAATAGTGTGATGTCCCAAGACGTATTTTGTTTCTCACTGCAGTATGACCTTGTTGGGTTTTCTGTATTGTGTCATGAATTTCGGTGGGCTTCATCTCCAAAAGGCATTTGAGAGCAGAGATGGAGTTTTCTTTATTTCTTTCTCACCTTAAGCTATGTGCTTTTATGTATTAAAGCGTAAATATGACTAAATTTACCATAGCCCATCCCACCTAAGTTTTTAGGTTATTTGGTTTTCATGATTGAACATGGTTTGAGAGCAAAATGTTGTGTTGTGTTCATCGAACTAACATAATTTCTTCTCCACTTATTATTGATTTCTACTTTAATGGACTTTCAACAATTTTCCAACCTCACAAATGAAAGGATTGCTAAAGTATAAATATCATTAAATTCAGCTTAGGCTTTTAGGTTGTTTGGTAGTTTAACATATTGGCAGGGTTGTTTTGTTGTGTTGTACATTGAAGCTATATATATAATCACTTCCCCCTTGTCCAAAAAAAGAAATCCTACAAAGGGGAAGTTTCTTAGTACATTTGTTGGAGAGAGAGTCACTATTCAAAGATCTGTTTTACTGCTAATTTCGAAAGTTTTAAGCCATTGTCTTTGGTTAATTTTCTTATATAACTTTTTGACAAGACTAGGAGCCATACGGCTTCTCTTCAGAGTAGGATTGCTGATGTAGTTGTTAAGGTCTTACATAAGTTTAAAGGTATTTTTGATGCTAGAAAAGATCAATGGTTTGTCGTTTGGTCCTTTGTTAAGTTTTAGTAGCTTGTGTTGCCGTTGTTCGCTAGATCTCATTTTACATGACTGAAGTTCATTTCATTAGTTTAAGAAGTCATGGATTGAAGTTTAAGAAGTCATGGATTCAATCCATGGTGATTATTTGCTTAAGATTTAATATCTACTGGTTTTCTTGACATCCATATGTTGTAGGCTCAGACAGGTTGTCTCGCGAGATTGATCGAGAAGTGTGTAAGCTGGCTTAGACACACATGATTGTAAATATATATGTTTTGCTTGACTCTCTTTATTTTTGTCGGGTGGCATACATACCTTAACTATTAATTTGAACTTTTGGATCAATCAATGATTTAAGATAGTATCAAAGGAGGTGGTCTAGGAGGTTCCATGTTCAAATTCTCTTCCAAATTAGTAATTATTTTCATTTGTTGGGTCTTCTACATATTTCAAGCCCATAAATAAATGGGAGTGTTGAATGATATATTAAACTTACATTCCTCCATTAACATAAATTTTTTGGTCTATCGTTGATTTAACTTGATGTCTTTTTGTATGTCCTCATATTTCTTTTTTCCCCATAAAAACTGCCAATAACTGTTGTCATCTTGTTTCCTATTACAGTTCTCCATGCTTTAGAAGTGCTTTGATGAAGTTCATCTTTCTTGAACCTCAAATTCTCTGTATTTCAATGTGTGGTAGGTTGAGACATGGAAGCCATAGTTGGTGTAAAGATTGATGCAGTTTGTTGAGTGATTGGAAGGCAGAGTTAGGGGATTTTGTGTATGGTTTAATATTTCAGGTTTGGCAGAGGGAATGAAGCCATTGGTCCGCTGAGCATAGTGATGTATGTAATAACATTGATATTTTTGTAAATTGATCTGATTTCTTCATATCAATTTCAATTTCCATATCTTTTTCATCTTTTCAGCCTTTTTCTTTGCCTACTGTTTATCAAAATGCCTGATTTAAGAACTGATCGATATTCCACGCCATGATTGATTCTACTGTCAACCTCAACGAGTCGGTAGACTCACTCGACACAATGCATAAATTCCATCAAACGTATAATATGACTTTCCTCATTTAATATCAATTTTATTTTAGAATGATTGTAATCATCTAGGTTACTTTCAAAACTTGCCCGTTGTGGCATTTTGAGTATCCACTTAAATGAGATTACTCATTCAATCGACTTAGTTTGAAACTTATACATATGGCTTGTATGCAATTTGAACCAACCTCGATCATGC

mRNA sequence

GTCTGTCTCCCTGTCTCTGTTGCTTTGTCTAGGAGGTCGTGCGGTGTAACAAAACAACCCCACTCTCACCCCCTTCTCCCCCGCTTCTTCAATCGCCATTTTCCTTAAACCCCAAATCCCCTTCTACCCTCTTCTTTCTTCCTTTTTCATTTCCCTCTGTCAAATTTTAGGGTTCAAAATGTTCTCCTCTCTTTTCCATGCTCAACTCCTATCCAACCATGCCGTTTCCTGCACTTCTTTGGAGTTTACCAAGCGCTGCTTCATACCCCCAAGGATGAAGAGAAAGTTGTTGAGACATGGAAGCCATAGTTGGTGTAAAGATTGATGCAGTTTGTTGAGTGATTGGAAGGCAGAGTTAGGGGATTTTGTGTATGGTTTAATATTTCAGGTTTGGCAGAGGGAATGAAGCCATTGGTCCGCTGAGCATAGTGATCCTTTTTCTTTGCCTACTGTTTATCAAAATGCCTGATTTAAGAACTGATCGATATTCCACGCCATGATTGATTCTACTGTCAACCTCAACGAGTCGGTAGACTCACTCGACACAATGCATAAATTCCATCAAACGTATAATATGACTTTCCTCATTTAATATCAATTTTATTTTAGAATGATTGTAATCATCTAGGTTACTTTCAAAACTTGCCCGTTGTGGCATTTTGAGTATCCACTTAAATGAGATTACTCATTCAATCGACTTAGTTTGAAACTTATACATATGGCTTGTATGCAATTTGAACCAACCTCGATCATGC

Coding sequence (CDS)

ATGTTCTCCTCTCTTTTCCATGCTCAACTCCTATCCAACCATGCCGTTTCCTGCACTTCTTTGGAGTTTACCAAGCGCTGCTTCATACCCCCAAGGATGAAGAGAAAGTTGTTGAGACATGGAAGCCATAGTTGGTGTAAAGATTGA

Protein sequence

MFSSLFHAQLLSNHAVSCTSLEFTKRCFIPPRMKRKLLRHGSHSWCKD
Homology
[Close]
BLAST of Cmc12g0329721 vs. NCBI nr
Match: ABQ53637.1 (15d_03-C10-like protein [Cucumis melo])

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-09
Identity = 35/45 (77.78%), Postives = 36/45 (80.00%), Query Frame = 0 

Query: 1  MFSSLFHAQLLSNHAVSCTSLEFTKRCFIPPRMKRKLLRHGSHSW 46
          MFSSLFHAQLLSNHAVSCTSLEFTKRCFIPPR  R L  +    W
Sbjct: 1  MFSSLFHAQLLSNHAVSCTSLEFTKRCFIPPRNMRLLGENDVIGW 45

[Close]
BLAST of Cmc12g0329721 vs. ExPASy TrEMBL
Match: A5Y730 (15d_03-C10-like protein OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.8e-10
Identity = 35/45 (77.78%), Postives = 36/45 (80.00%), Query Frame = 0 

Query: 1  MFSSLFHAQLLSNHAVSCTSLEFTKRCFIPPRMKRKLLRHGSHSW 46
          MFSSLFHAQLLSNHAVSCTSLEFTKRCFIPPR  R L  +    W
Sbjct: 1  MFSSLFHAQLLSNHAVSCTSLEFTKRCFIPPRNMRLLGENDVIGW 45

The following BLAST results are available for this feature:
BLAST of Cmc12g0329721 vs. NCBI nr
Match NameE-valueIdentityDescription
ABQ53637.11.2e-0977.7815d_03-C10-like protein [Cucumis melo][more]
BLAST of Cmc12g0329721 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc12g0329721 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A5Y7305.8e-1077.7815d_03-C10-like protein OS=Cucumis melo OX=3656 PE=4 SV=1[more]
BLAST of Cmc12g0329721 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0329721.1Cmc12g0329721.1mRNA