Cmc12g0328871 (gene) Melon (Charmono) v1.1

BLAST of Cmc12g0328871 vs. NCBI nr
Match: XP_008444579.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucumis melo] >KAA0054005.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK20690.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1437.9 bits (3721), Expect = 0.0e+00
Identity = 719/722 (99.58%), Postives = 720/722 (99.72%), Query Frame = 0

Query: 1   MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
           MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT
Sbjct: 1   MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60

Query: 61  LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
           LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS
Sbjct: 61  LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120

Query: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
           MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH
Sbjct: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180

Query: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
           QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFR FVRMRAEQLVPDSLTFVNLLRFIAGLN
Sbjct: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRVFVRMRAEQLVPDSLTFVNLLRFIAGLN 240

Query: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
           SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300

Query: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
           AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS
Sbjct: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360

Query: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
           QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK
Sbjct: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420

Query: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
           SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE
Sbjct: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480

Query: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
           MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540

Query: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHYACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
           CVNSGLIEKGKEFFKEMTESYGCLPSQEH+ACMVNLLGRAGLISEAGELVRNMPIKPDAR
Sbjct: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHFACMVNLLGRAGLISEAGELVRNMPIKPDAR 600

Query: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
           VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660

Query: 661 NKGLKKTPGSSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP 720
           NKGLKKTPG SSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP
Sbjct: 661 NKGLKKTPGCSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP 720

Query: 721 LL 723
           LL
Sbjct: 721 LL 722

BLAST of Cmc12g0328871 vs. NCBI nr
Match: XP_038894029.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 1255.7 bits (3248), Expect = 0.0e+00
Identity = 627/721 (86.96%), Postives = 664/721 (92.09%), Query Frame = 0

Query: 1   MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
           MLHLQRSKP+IH+ I  NFPATQSRLLNTLS LF+RC+S QHL+QIHARF+LHGFHQNPT
Sbjct: 34  MLHLQRSKPVIHSLIFPNFPATQSRLLNTLSFLFDRCSSRQHLKQIHARFVLHGFHQNPT 93

Query: 61  LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
           LSSKLIDCYANLGLL  SLQVF SI +PN T++NAILRNLTRYGE ER LLVY+QMVAKS
Sbjct: 94  LSSKLIDCYANLGLLNLSLQVFYSITEPNSTIYNAILRNLTRYGECERTLLVYRQMVAKS 153

Query: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
           MHPDEETYP + RSC SFSNVG GR IHGYLVKLGFDSFD+VATAL EMYE+ I FE+AH
Sbjct: 154 MHPDEETYPSVLRSCCSFSNVGSGRKIHGYLVKLGFDSFDMVATALGEMYEECIDFESAH 213

Query: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
           QLFDKRSVKDL   SS TTE  QNGNGEGIF  F RMR EQLV DSLTF+NLLRFIAG N
Sbjct: 214 QLFDKRSVKDLECWSSFTTEAPQNGNGEGIFGVFGRMRVEQLVTDSLTFINLLRFIAGFN 273

Query: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
           SIQLAKIVHCIAIVSKL GDLLV TAVLSLYSKL SLVDAR+LFDKMPE DRVVWNIMIA
Sbjct: 274 SIQLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLGSLVDARKLFDKMPENDRVVWNIMIA 333

Query: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
           AYAREGKP ECL LFKSMARSGIRSD+FTALPVISSI+QLK  DWGKQTHA+ILRNGSDS
Sbjct: 334 AYAREGKPTECLALFKSMARSGIRSDMFTALPVISSISQLKYFDWGKQTHAYILRNGSDS 393

Query: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
           QVSV+NSLIDMYCEC +LDSAC IFNWM DK+VISWSAMIKGYVK+G SL A SLFS MK
Sbjct: 394 QVSVYNSLIDMYCECNILDSACKIFNWMKDKTVISWSAMIKGYVKHGHSLIALSLFSSMK 453

Query: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
           SDGIQ+DF+T+INILPAFVHIG LENVKYLHGYSMKLGLTSLPSLNTALLITYAKCG IE
Sbjct: 454 SDGIQSDFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 513

Query: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
           MAQR+FEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYN+MKCSN+KPDQVTFLGLLTA
Sbjct: 514 MAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNTKPDQVTFLGLLTA 573

Query: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHYACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
           CVNSGL+EKGKEF KEMTE+YGC PSQEHYACMVNLLGRAGLI+EAGELVRNMPIKPDAR
Sbjct: 574 CVNSGLVEKGKEFLKEMTENYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 633

Query: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
           VWGPLLSACK+HPGSKLAEFAAEKL+DMEPKNAGNYILLSNIYAAAGKW+EVAKMRSFLR
Sbjct: 634 VWGPLLSACKLHPGSKLAEFAAEKLVDMEPKNAGNYILLSNIYAAAGKWDEVAKMRSFLR 693

Query: 661 NKGLKKTPGSSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP 720
           +KGLKKTPG S LEING VTEFRVADQTHPRAEDIYTILGNLELEIKE REKSL+ L NP
Sbjct: 694 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKEAREKSLEKLGNP 753

Query: 721 L 722
           L
Sbjct: 754 L 754

BLAST of Cmc12g0328871 vs. NCBI nr
Match: XP_022139869.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Momordica charantia])

HSP 1 Score: 1164.4 bits (3011), Expect = 0.0e+00
Identity = 586/717 (81.73%), Postives = 633/717 (88.28%), Query Frame = 0

Query: 1   MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
           MLHLQRSKPI       NFPATQSR LNTLS LF+RC+S Q L+QIHARFILHG HQNP 
Sbjct: 1   MLHLQRSKPIFRFE-FSNFPATQSRPLNTLSFLFSRCSSRQQLEQIHARFILHGLHQNPA 60

Query: 61  LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
           LS +LID YANLGLL  S QVF SIIDP  TL++AILRNL+ +GE ER LLVY++M AKS
Sbjct: 61  LSCELIDSYANLGLLTLSQQVFNSIIDPTSTLYSAILRNLSSFGEYERTLLVYREMFAKS 120

Query: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
           MHPDEETYP + RSC   SNV +GR IHG+LVKLG D +D  ATALAEMY K I FEN H
Sbjct: 121 MHPDEETYPSVLRSCCCLSNVEYGRKIHGHLVKLGVDLYDSTATALAEMYRKCIGFENGH 180

Query: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
            LFDK  +KD    +SL +E SQNGNG+ IF+ F RMR EQLV DSLTF+NLLR I GLN
Sbjct: 181 DLFDKMPMKDFECWNSLNSEASQNGNGDEIFQLFGRMRTEQLVSDSLTFINLLRSIVGLN 240

Query: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
           SIQLAKIVHC+AI S L GDLLV TAVLSLYSKL  LV+AR+LFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCVAITSNLCGDLLVNTAVLSLYSKLGCLVNARKLFDKMPEKDRVVWNIMIA 300

Query: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
           AY REG P ECLELFKSMARSGIR+DLFTALPVISSI+QLKCVDWGKQTHAH LRNGSD+
Sbjct: 301 AYDREGNPAECLELFKSMARSGIRADLFTALPVISSISQLKCVDWGKQTHAHTLRNGSDN 360

Query: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
           QVSVHNSLIDMYCE  +LDSAC IF+WMT+K+VISWSAMIKG VK+GQSL A SLFS+MK
Sbjct: 361 QVSVHNSLIDMYCELNILDSACKIFSWMTNKTVISWSAMIKGCVKHGQSLNALSLFSRMK 420

Query: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
           SDGIQADF+T+INILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCG IE
Sbjct: 421 SDGIQADFITVINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 480

Query: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
           MAQRLFEEER+DDKDLIMWNSMISAHANHGDWSQCFK+YN+MKCSNS+PDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFKIYNQMKCSNSRPDQVTFLGLLTA 540

Query: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHYACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
           CVNSGL+EKGKE FKEM E+YGC PSQEHYACMVNLLGRAGLI++AG LVRNMPIKPDAR
Sbjct: 541 CVNSGLVEKGKECFKEMIENYGCQPSQEHYACMVNLLGRAGLINDAGALVRNMPIKPDAR 600

Query: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
           VWGPLLSACK+HPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKW+ VAKMRSFLR
Sbjct: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660

Query: 661 NKGLKKTPGSSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTL 718
           +KGLKKTPG S LEING VTEFRVAD+THPRAEDIYTILGNLELEIKE REKS + L
Sbjct: 661 DKGLKKTPGCSWLEINGHVTEFRVADRTHPRAEDIYTILGNLELEIKEAREKSPEKL 716

BLAST of Cmc12g0328871 vs. NCBI nr
Match: KAG6573373.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1160.6 bits (3001), Expect = 0.0e+00
Identity = 585/717 (81.59%), Postives = 632/717 (88.15%), Query Frame = 0

Query: 1   MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
           M HLQRSKPI       NFPATQSRLLNTLS LF+RC S Q LQQIHARF+LHGFHQNPT
Sbjct: 1   MFHLQRSKPIFRFK-FPNFPATQSRLLNTLSSLFSRCKSRQQLQQIHARFVLHGFHQNPT 60

Query: 61  LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
           LS KLIDCYAN GLL  S  VF SIIDPN  L+NAILRNLTR+GE ER LLVY++MVAKS
Sbjct: 61  LSCKLIDCYANFGLLNLSHHVFNSIIDPNSALYNAILRNLTRFGEYERTLLVYREMVAKS 120

Query: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
           MHPDE+TYPF+ RSC   SNV FG+ IHG L+KLG DS+D V T L EMYEK I FENAH
Sbjct: 121 MHPDEQTYPFVLRSCCCLSNVQFGKNIHGCLIKLGVDSYDTVVTVLVEMYEKCIDFENAH 180

Query: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
           QLFDK SVKDL   SSL TE  QNGNG+ I R F RM++E LV DSLTF+NLLR ++GL+
Sbjct: 181 QLFDKMSVKDLDCWSSLITEAPQNGNGDDISRLFGRMKSEPLVTDSLTFINLLRSVSGLS 240

Query: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
           SIQLAKIVHCIAIVS L GDLLV TAVLSLYSKL SLVDAR+LF+K+PEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKIPEKDRVVWNIMIA 300

Query: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
           AYAREG+P ECLELF+SMARSGIR+DLFTALPVISSI+QLK  DWGKQTHA+ILRNGSDS
Sbjct: 301 AYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKRADWGKQTHANILRNGSDS 360

Query: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
           QVSVHNSLIDMYCEC  LDSAC IFN +T+K+VISWSAMIKG VK+G  L A SLF +MK
Sbjct: 361 QVSVHNSLIDMYCECNSLDSACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLFFRMK 420

Query: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
           SDGIQADF+T+INI+PAFV IGALENVKYLHGYS+KL LTSLPSLNTALLITYAKCG I+
Sbjct: 421 SDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKCGCID 480

Query: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
           MAQRLFEEER+DDKDLIMWNSMISAHANHGDWSQCF LYN+MKCSNS PDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFNLYNQMKCSNSNPDQVTFLGLLTA 540

Query: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHYACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
           CVNSGL+EKGKEFFKEM ESY C PSQEHYACMVNLLGRAGLI+EAGELVRNMPIKPDAR
Sbjct: 541 CVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 600

Query: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
           VWGPLLSACK+HPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKW+ VAKMRSFLR
Sbjct: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660

Query: 661 NKGLKKTPGSSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTL 718
           +KGLKKTPG S LEINGRV EFRVAD+THPRAEDIY ILGNLEL+IKE +E S + L
Sbjct: 661 DKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEKL 716

BLAST of Cmc12g0328871 vs. NCBI nr
Match: XP_022994744.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 1157.9 bits (2994), Expect = 0.0e+00
Identity = 585/721 (81.14%), Postives = 634/721 (87.93%), Query Frame = 0

Query: 1   MLHLQRSKPIIHTPILL----NFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFH 60
           M HLQRSK I  +PI      NFPATQSRLLNTLS LF+RC S Q L+QIHARF+LHGFH
Sbjct: 1   MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH 60

Query: 61  QNPTLSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQM 120
           QNPTLS KLIDCYAN GLL  S  VF SIIDPN TL+NAILRNLTR+GE ER LLVY++M
Sbjct: 61  QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM 120

Query: 121 VAKSMHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAF 180
           VAKSMHPDE+TYPF+ +SC   SNV FG+ IHG L+KLG DS+D V T LAEMY K I F
Sbjct: 121 VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF 180

Query: 181 ENAHQLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFI 240
           ENAHQLFDK SVKDL   SSL +E  QNGNG+ I     RM++E LV DSLTF+NLLR I
Sbjct: 181 ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI 240

Query: 241 AGLNSIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWN 300
           +GL+SIQLAKIVHCIAIVS L GDLLV TAVLSLYSKL SLVDAR+LF+KMPEKDRVVWN
Sbjct: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300

Query: 301 IMIAAYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRN 360
           IMIAAYAREG+P ECLELF+SMARSGIR+DLFTALPVISSI+QLKC DWGKQTHA+ILRN
Sbjct: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN 360

Query: 361 GSDSQVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLF 420
           GSDSQVSVHNSLIDMYCEC  L+SAC IFN +T+K+VISWSAMIKG VK+G  L A SLF
Sbjct: 361 GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420

Query: 421 SKMKSDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKC 480
             MKSDGIQADF+T+INI+PAFV IGALENVKYLHGYS+KL LTSLPSLNTALLITYAKC
Sbjct: 421 FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480

Query: 481 GYIEMAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLG 540
           G IEMAQRLFEEER++DKDLIMWNSMISAHANHGDWSQCFKLYN+MKCSNS PDQVTFLG
Sbjct: 481 GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540

Query: 541 LLTACVNSGLIEKGKEFFKEMTESYGCLPSQEHYACMVNLLGRAGLISEAGELVRNMPIK 600
           LLTACVNSGL+EKGKEFFKEM ESY C PSQEHYACMVNLLGRAGLI+EAGELVRNMPIK
Sbjct: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600

Query: 601 PDARVWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMR 660
           PDARVWGPLLSACK+HPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKW+ VAKMR
Sbjct: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660

Query: 661 SFLRNKGLKKTPGSSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDT 718
           SFLR+KGLKKTPG S LEINGRV EFRVAD+THPRAEDIY ILGNLEL+IKE +E S + 
Sbjct: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720

BLAST of Cmc12g0328871 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 6.2e-121
Identity = 256/707 (36.21%), Postives = 386/707 (54.60%), Query Frame = 0

Query: 7   SKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPTLSSKLI 66
           S P    P   + P    R   +LSLL N C ++Q L+ IHA+ I  G H      SKLI
Sbjct: 14  SYPFHFLPSSSDPPYDSIRNHPSLSLLHN-CKTLQSLRIIHAQMIKIGLHNTNYALSKLI 73

Query: 67  D-CYANLGL--LKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKSMHP 126
           + C  +     L +++ VF +I +PNL ++N + R      +   AL +Y  M++  + P
Sbjct: 74  EFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLP 133

Query: 127 DEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAHQLF 186
           +  T+PF+ +SC+       G+ IHG+++KLG D    V T+L  MY +    E+AH++F
Sbjct: 134 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 193

Query: 187 DKRSVKDLGWSSSLTTEGSQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFIAGLNSIQ 246
           DK   +                                                      
Sbjct: 194 DKSPHR------------------------------------------------------ 253

Query: 247 LAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIAAYA 306
                           D++ YTA++  Y+    + +A++LFD++P KD V WN MI+ YA
Sbjct: 254 ----------------DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYA 313

Query: 307 REGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVS 366
             G  +E LELFK M ++ +R D  T + V+S+ AQ   ++ G+Q H  I  +G  S + 
Sbjct: 314 ETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLK 373

Query: 367 VHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMKSDG 426
           + N+LID+Y +C  L++AC +F  +  K VISW+ +I GY        A  LF +M   G
Sbjct: 374 IVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 433

Query: 427 IQADFVTMINILPAFVHIGALENVKYLHGYSMK--LGLTSLPSLNTALLITYAKCGYIEM 486
              + VTM++ILPA  H+GA++  +++H Y  K   G+T+  SL T+L+  YAKCG IE 
Sbjct: 434 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 493

Query: 487 AQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTAC 546
           A ++F    I  K L  WN+MI   A HG     F L++RM+    +PD +TF+GLL+AC
Sbjct: 494 AHQVFNS--ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSAC 553

Query: 547 VNSGLIEKGKEFFKEMTESYGCLPSQEHYACMVNLLGRAGLISEAGELVRNMPIKPDARV 606
            +SG+++ G+  F+ MT+ Y   P  EHY CM++LLG +GL  EA E++  M ++PD  +
Sbjct: 554 SHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVI 613

Query: 607 WGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLRN 666
           W  LL ACKMH   +L E  AE LI +EP+N G+Y+LLSNIYA+AG+W EVAK R+ L +
Sbjct: 614 WCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLND 647

Query: 667 KGLKKTPGSSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKE 709
           KG+KK PG SS+EI+  V EF + D+ HPR  +IY +L  +E+ +++
Sbjct: 674 KGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647

BLAST of Cmc12g0328871 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.9e-114
Identity = 227/679 (33.43%), Postives = 377/679 (55.52%), Query Frame = 0

Query: 31  SLLFNRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLKHSLQVFCSIIDPNL 90
           +LL  RC+S++ L+QI      +G +Q     +KL+  +   G +  + +VF  I     
Sbjct: 41  ALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100

Query: 91  TLFNAILRNLTRYGESERALLVYQQMVAKSMHPDEETYPFIFRSCSSFSNVGFGRTIHGY 150
            L++ +L+   +  + ++AL  + +M    + P    + ++ + C   + +  G+ IHG 
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160

Query: 151 LVKLGFDSFDVVA-TALAEMYEKWIAFENAHQLFDKRSVKDLGWSSSLTTEGSQNGNGEG 210
           LVK GF S D+ A T L  MY K      A ++FD+   +DL   +++    SQNG    
Sbjct: 161 LVKSGF-SLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 220

Query: 211 IFRGFVRMRAEQLVPDSLTFVNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVYTAVLS 270
                  M  E L P  +T V++L  ++ L  I + K +H  A+ S     + + TA++ 
Sbjct: 221 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 280

Query: 271 LYSKLRSLVDARRLFDKMPEKDRVVWNIMIAAYAREGKPRECLELFKSMARSGIRSDLFT 330
           +Y+K  SL  AR+LFD M E++ V WN MI AY +   P+E + +F+ M   G++    +
Sbjct: 281 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 340

Query: 331 ALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKMLDSACNIFNWMT 390
            +  + + A L  ++ G+  H   +  G D  VSV NSLI MYC+CK +D+A ++F  + 
Sbjct: 341 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 400

Query: 391 DKSVISWSAMIKGYVKNGQSLTASSLFSKMKSDGIQADFVTMINILPAFVHIGALENVKY 450
            ++++SW+AMI G+ +NG+ + A + FS+M+S  ++ D  T ++++ A   +    + K+
Sbjct: 401 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 460

Query: 451 LHGYSMKLGLTSLPSLNTALLITYAKCGYIEMAQRLFEEERIDDKDLIMWNSMISAHANH 510
           +HG  M+  L     + TAL+  YAKCG I +A+ +F  + + ++ +  WN+MI  +  H
Sbjct: 461 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF--DMMSERHVTTWNAMIDGYGTH 520

Query: 511 GDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLIEKGKEFFKEMTESYGCLPSQEH 570
           G      +L+  M+    KP+ VTFL +++AC +SGL+E G + F  M E+Y    S +H
Sbjct: 521 GFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDH 580

Query: 571 YACMVNLLGRAGLISEAGELVRNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLIDME 630
           Y  MV+LLGRAG ++EA + +  MP+KP   V+G +L AC++H     AE AAE+L ++ 
Sbjct: 581 YGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELN 640

Query: 631 PKNAGNYILLSNIYAAAGKWEEVAKMRSFLRNKGLKKTPGSSSLEINGRVTEFRVADQTH 690
           P + G ++LL+NIY AA  WE+V ++R  +  +GL+KTPG S +EI   V  F      H
Sbjct: 641 PDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAH 700

Query: 691 PRAEDIYTILGNLELEIKE 709
           P ++ IY  L  L   IKE
Sbjct: 701 PDSKKIYAFLEKLICHIKE 716

BLAST of Cmc12g0328871 vs. ExPASy Swiss-Prot
Match: Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 5.3e-112
Identity = 231/724 (31.91%), Postives = 398/724 (54.97%), Query Frame = 0

Query: 14  PILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLG 73
           P LLN    QS+           C +I  L+  H      G   + +  +KL+     LG
Sbjct: 23  PSLLN----QSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELG 82

Query: 74  LLKHSLQVFCSIIDPNLT-----LFNAILRNLTRYGESERALLVYQQMVAKSMHPDEETY 133
             + SL     + + + +     ++N+++R     G    A+L++ +M+   + PD+ T+
Sbjct: 83  -TRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTF 142

Query: 134 PFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAHQLFDKRSV 193
           PF   +C+     G G  IHG +VK+G+     V  +L   Y +    ++A ++FD+ S 
Sbjct: 143 PFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE 202

Query: 194 KD-LGWSSSLTTEGSQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFIAGLNSIQLAKI 253
           ++ + W+S +     ++   + +   F  +R E++ P+S+T V ++   A L  ++  + 
Sbjct: 203 RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 262

Query: 254 VHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIAAYAREGK 313
           V+     S +  + L+ +A++ +Y K  ++  A+RLFD+    +  + N M + Y R+G 
Sbjct: 263 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGL 322

Query: 314 PRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNS 373
            RE L +F  M  SG+R D  + L  ISS +QL+ + WGK  H ++LRNG +S  ++ N+
Sbjct: 323 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 382

Query: 374 LIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQ------------------- 433
           LIDMY +C   D+A  IF+ M++K+V++W++++ GYV+NG+                   
Sbjct: 383 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 442

Query: 434 -----SLTASSLF--------SKMKSDGIQADFVTMINILPAFVHIGALENVKYLHGYSM 493
                 L   SLF        S    +G+ AD VTM++I  A  H+GAL+  K+++ Y  
Sbjct: 443 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 502

Query: 494 KLGLTSLPSLNTALLITYAKCGYIEMAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQC 553
           K G+     L T L+  +++CG  E A  +F    + ++D+  W + I A A  G+  + 
Sbjct: 503 KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNS--LTNRDVSAWTAAIGAMAMAGNAERA 562

Query: 554 FKLYNRMKCSNSKPDQVTFLGLLTACVNSGLIEKGKEFFKEMTESYGCLPSQEHYACMVN 613
            +L++ M     KPD V F+G LTAC + GL+++GKE F  M + +G  P   HY CMV+
Sbjct: 563 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 622

Query: 614 LLGRAGLISEAGELVRNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGN 673
           LLGRAGL+ EA +L+ +MP++P+  +W  LL+AC++    ++A +AAEK+  + P+  G+
Sbjct: 623 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 682

Query: 674 YILLSNIYAAAGKWEEVAKMRSFLRNKGLKKTPGSSSLEINGRVTEFRVADQTHPRAEDI 700
           Y+LLSN+YA+AG+W ++AK+R  ++ KGL+K PG+SS++I G+  EF   D++HP   +I
Sbjct: 683 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 739

BLAST of Cmc12g0328871 vs. ExPASy Swiss-Prot
Match: O81767 (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 402.9 bits (1034), Expect = 7.6e-111
Identity = 228/690 (33.04%), Postives = 386/690 (55.94%), Query Frame = 0

Query: 23  QSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLKHSLQVF 82
           +S+ ++ +  LF  C ++Q  + +HAR ++    QN  +S+KL++ Y  LG +  +   F
Sbjct: 50  ESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTF 109

Query: 83  CSIIDPNLTLFNAILRNLTRYGESERALLVYQQ-MVAKSMHPDEETYPFIFRSCSSFSNV 142
             I + ++  +N ++    R G S   +  +   M++  + PD  T+P + ++C +  + 
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID- 169

Query: 143 GFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAHQLFDKRSVKDLGWSSSLTTEG 202
             G  IH   +K GF     VA +L  +Y ++ A  NA  LFD+  V+D+G  +++ +  
Sbjct: 170 --GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 229

Query: 203 SQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDL 262
            Q+GN +        +RA     DS+T V+LL              +H  +I   L  +L
Sbjct: 230 CQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 289

Query: 263 LVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIAAYAREGKPRECLELFKSMARS 322
            V   ++ LY++   L D +++FD+M  +D + WN +I AY    +P   + LF+ M  S
Sbjct: 290 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 349

Query: 323 GIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNG-SDSQVSVHNSLIDMYCECKMLDS 382
            I+ D  T + + S ++QL  +   +      LR G     +++ N+++ MY +  ++DS
Sbjct: 350 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 409

Query: 383 ACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMKSDG-IQADFVTMINILPAFV 442
           A  +FNW+ +  VISW+ +I GY +NG +  A  +++ M+ +G I A+  T +++LPA  
Sbjct: 410 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 469

Query: 443 HIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIEMAQRLFEEERIDDKDLIMW 502
             GAL     LHG  +K GL     + T+L   Y KCG +E A  LF +  I   + + W
Sbjct: 470 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQ--IPRVNSVPW 529

Query: 503 NSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLIEKGKEFFKEMTE 562
           N++I+ H  HG   +   L+  M     KPD +TF+ LL+AC +SGL+++G+  F+ M  
Sbjct: 530 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQT 589

Query: 563 SYGCLPSQEHYACMVNLLGRAGLISEAGELVRNMPIKPDARVWGPLLSACKMHPGSKLAE 622
            YG  PS +HY CMV++ GRAG +  A + +++M ++PDA +WG LLSAC++H    L +
Sbjct: 590 DYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGK 649

Query: 623 FAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLRNKGLKKTPGSSSLEINGRV 682
            A+E L ++EP++ G ++LLSN+YA+AGKWE V ++RS    KGL+KTPG SS+E++ +V
Sbjct: 650 IASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKV 709

Query: 683 TEFRVADQTHPRAEDIYTILGNLELEIKEV 710
             F   +QTHP  E++Y  L  L+ ++K +
Sbjct: 710 EVFYTGNQTHPMYEEMYRELTALQAKLKMI 730

BLAST of Cmc12g0328871 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 5.5e-109
Identity = 226/671 (33.68%), Postives = 371/671 (55.29%), Query Frame = 0

Query: 53  HGFHQNPTLSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLV 112
           +GF  +  L SKL   Y N G LK + +VF  +       +N ++  L + G+   ++ +
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182

Query: 113 YQQMVAKSMHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEK 172
           +++M++  +  D  T+  + +S SS  +V  G  +HG+++K GF   + V  +L   Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242

Query: 173 WIAFENAHQLFDKRSVKD-LGWSSSLTTEGSQNGNGEGIFRGFVRMRAEQLVPDSLTFVN 232
               ++A ++FD+ + +D + W+S +    S NG  E     FV+M    +  D  T V+
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVS-NGLAEKGLSVFVQMLVSGIEIDLATIVS 302

Query: 233 LLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKD 292
           +    A    I L + VH I + +  S +      +L +YSK   L  A+ +F +M ++ 
Sbjct: 303 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 362

Query: 293 RVVWNIMIAAYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHA 352
            V +  MIA YAREG   E ++LF+ M   GI  D++T   V++  A+ + +D GK+ H 
Sbjct: 363 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 422

Query: 353 HILRNGSDSQVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLT 412
            I  N     + V N+L+DMY +C  +  A  +F+ M  K +ISW+ +I GY KN  +  
Sbjct: 423 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 482

Query: 413 ASSLFS-KMKSDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALL 472
           A SLF+  ++      D  T+  +LPA   + A +  + +HGY M+ G  S   +  +L+
Sbjct: 483 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 542

Query: 473 ITYAKCGYIEMAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPD 532
             YAKCG + +A  LF++  I  KDL+ W  MI+ +  HG   +   L+N+M+ +  + D
Sbjct: 543 DMYAKCGALLLAHMLFDD--IASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEAD 602

Query: 533 QVTFLGLLTACVNSGLIEKGKEFFKEMTESYGCLPSQEHYACMVNLLGRAGLISEAGELV 592
           +++F+ LL AC +SGL+++G  FF  M       P+ EHYAC+V++L R G + +A   +
Sbjct: 603 EISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFI 662

Query: 593 RNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWE 652
            NMPI PDA +WG LL  C++H   KLAE  AEK+ ++EP+N G Y+L++NIYA A KWE
Sbjct: 663 ENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWE 722

Query: 653 EVAKMRSFLRNKGLKKTPGSSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVR 712
           +V ++R  +  +GL+K PG S +EI GRV  F   D ++P  E       N+E  +++VR
Sbjct: 723 QVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETE-------NIEAFLRKVR 782

Query: 713 EKSLDTLVNPL 722
            + ++   +PL
Sbjct: 783 ARMIEEGYSPL 783

BLAST of Cmc12g0328871 vs. ExPASy TrEMBL
Match: A0A5D3DB69 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00810 PE=4 SV=1)

HSP 1 Score: 1437.9 bits (3721), Expect = 0.0e+00
Identity = 719/722 (99.58%), Postives = 720/722 (99.72%), Query Frame = 0

Query: 1   MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
           MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT
Sbjct: 1   MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60

Query: 61  LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
           LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS
Sbjct: 61  LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120

Query: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
           MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH
Sbjct: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180

Query: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
           QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFR FVRMRAEQLVPDSLTFVNLLRFIAGLN
Sbjct: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRVFVRMRAEQLVPDSLTFVNLLRFIAGLN 240

Query: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
           SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300

Query: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
           AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS
Sbjct: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360

Query: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
           QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK
Sbjct: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420

Query: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
           SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE
Sbjct: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480

Query: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
           MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540

Query: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHYACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
           CVNSGLIEKGKEFFKEMTESYGCLPSQEH+ACMVNLLGRAGLISEAGELVRNMPIKPDAR
Sbjct: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHFACMVNLLGRAGLISEAGELVRNMPIKPDAR 600

Query: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
           VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660

Query: 661 NKGLKKTPGSSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP 720
           NKGLKKTPG SSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP
Sbjct: 661 NKGLKKTPGCSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP 720

Query: 721 LL 723
           LL
Sbjct: 721 LL 722

BLAST of Cmc12g0328871 vs. ExPASy TrEMBL
Match: A0A1S3BBG7 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487849 PE=4 SV=1)

HSP 1 Score: 1437.9 bits (3721), Expect = 0.0e+00
Identity = 719/722 (99.58%), Postives = 720/722 (99.72%), Query Frame = 0

Query: 1   MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
           MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT
Sbjct: 1   MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60

Query: 61  LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
           LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS
Sbjct: 61  LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120

Query: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
           MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH
Sbjct: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180

Query: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
           QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFR FVRMRAEQLVPDSLTFVNLLRFIAGLN
Sbjct: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRVFVRMRAEQLVPDSLTFVNLLRFIAGLN 240

Query: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
           SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300

Query: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
           AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS
Sbjct: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360

Query: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
           QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK
Sbjct: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420

Query: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
           SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE
Sbjct: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480

Query: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
           MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540

Query: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHYACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
           CVNSGLIEKGKEFFKEMTESYGCLPSQEH+ACMVNLLGRAGLISEAGELVRNMPIKPDAR
Sbjct: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHFACMVNLLGRAGLISEAGELVRNMPIKPDAR 600

Query: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
           VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660

Query: 661 NKGLKKTPGSSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP 720
           NKGLKKTPG SSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP
Sbjct: 661 NKGLKKTPGCSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP 720

Query: 721 LL 723
           LL
Sbjct: 721 LL 722

BLAST of Cmc12g0328871 vs. ExPASy TrEMBL
Match: A0A0A0M0Z6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534720 PE=4 SV=1)

HSP 1 Score: 1356.3 bits (3509), Expect = 0.0e+00
Identity = 679/722 (94.04%), Postives = 692/722 (95.84%), Query Frame = 0

Query: 1   MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
           MLHL RSKPIIH+PI LNFPATQSRLLNTLSLLF+RCNSIQHLQQIHARFILHGFHQNPT
Sbjct: 1   MLHLHRSKPIIHSPIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPT 60

Query: 61  LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
           LSSKLIDCYANLGLL HSLQVFCS+IDPNLTLFNAILRNLTRYGESER LLVYQQMVAKS
Sbjct: 61  LSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKS 120

Query: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
           MHPDEETYPF+ RSCSSFSNVGFGRTIHGYLVKLGFD FDVVATALAEMYE+ I FENAH
Sbjct: 121 MHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH 180

Query: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
           QLFDKRSVKDLGW SSLTTEG QN NGEGIFR F RM AEQLVPDS TF NLLRFIAGLN
Sbjct: 181 QLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLN 240

Query: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
           SIQLAKIVHCIAIVSKLSGDLLV TAVLSLYSKLRSLVDAR+LFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIA 300

Query: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
           AYAREGKP ECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS
Sbjct: 301 AYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360

Query: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
           QVSVHNSLIDMYCECK+LDSAC IFNWMTDKSVISWSAMIKGYVKNGQSLTA SLFSKMK
Sbjct: 361 QVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMK 420

Query: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
           SDGIQADFV MINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCG IE
Sbjct: 421 SDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIE 480

Query: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
           MAQRLFEEE+IDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA
Sbjct: 481 MAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540

Query: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHYACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
           CVNSGL+EKGKEFFKEMTESYGC PSQEHYACMVNLLGRAGLISEAGELV+NMPIKPDAR
Sbjct: 541 CVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDAR 600

Query: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
           VWGPLLSACKMHPGSKLAEFAAEKLI+MEP+NAGNYILLSNIYAAAGKW+ VAKMRSFLR
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660

Query: 661 NKGLKKTPGSSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP 720
           NKGLKK PG S LEING VTEFRVADQTHPRA DIYTILGNLELEIKEVREKS DTLVNP
Sbjct: 661 NKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDTLVNP 720

Query: 721 LL 723
           LL
Sbjct: 721 LL 722

BLAST of Cmc12g0328871 vs. ExPASy TrEMBL
Match: A0A6J1CE61 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111010677 PE=4 SV=1)

HSP 1 Score: 1164.4 bits (3011), Expect = 0.0e+00
Identity = 586/717 (81.73%), Postives = 633/717 (88.28%), Query Frame = 0

Query: 1   MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
           MLHLQRSKPI       NFPATQSR LNTLS LF+RC+S Q L+QIHARFILHG HQNP 
Sbjct: 1   MLHLQRSKPIFRFE-FSNFPATQSRPLNTLSFLFSRCSSRQQLEQIHARFILHGLHQNPA 60

Query: 61  LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
           LS +LID YANLGLL  S QVF SIIDP  TL++AILRNL+ +GE ER LLVY++M AKS
Sbjct: 61  LSCELIDSYANLGLLTLSQQVFNSIIDPTSTLYSAILRNLSSFGEYERTLLVYREMFAKS 120

Query: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
           MHPDEETYP + RSC   SNV +GR IHG+LVKLG D +D  ATALAEMY K I FEN H
Sbjct: 121 MHPDEETYPSVLRSCCCLSNVEYGRKIHGHLVKLGVDLYDSTATALAEMYRKCIGFENGH 180

Query: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
            LFDK  +KD    +SL +E SQNGNG+ IF+ F RMR EQLV DSLTF+NLLR I GLN
Sbjct: 181 DLFDKMPMKDFECWNSLNSEASQNGNGDEIFQLFGRMRTEQLVSDSLTFINLLRSIVGLN 240

Query: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
           SIQLAKIVHC+AI S L GDLLV TAVLSLYSKL  LV+AR+LFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCVAITSNLCGDLLVNTAVLSLYSKLGCLVNARKLFDKMPEKDRVVWNIMIA 300

Query: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
           AY REG P ECLELFKSMARSGIR+DLFTALPVISSI+QLKCVDWGKQTHAH LRNGSD+
Sbjct: 301 AYDREGNPAECLELFKSMARSGIRADLFTALPVISSISQLKCVDWGKQTHAHTLRNGSDN 360

Query: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
           QVSVHNSLIDMYCE  +LDSAC IF+WMT+K+VISWSAMIKG VK+GQSL A SLFS+MK
Sbjct: 361 QVSVHNSLIDMYCELNILDSACKIFSWMTNKTVISWSAMIKGCVKHGQSLNALSLFSRMK 420

Query: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
           SDGIQADF+T+INILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCG IE
Sbjct: 421 SDGIQADFITVINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 480

Query: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
           MAQRLFEEER+DDKDLIMWNSMISAHANHGDWSQCFK+YN+MKCSNS+PDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFKIYNQMKCSNSRPDQVTFLGLLTA 540

Query: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHYACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
           CVNSGL+EKGKE FKEM E+YGC PSQEHYACMVNLLGRAGLI++AG LVRNMPIKPDAR
Sbjct: 541 CVNSGLVEKGKECFKEMIENYGCQPSQEHYACMVNLLGRAGLINDAGALVRNMPIKPDAR 600

Query: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
           VWGPLLSACK+HPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKW+ VAKMRSFLR
Sbjct: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660

Query: 661 NKGLKKTPGSSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTL 718
           +KGLKKTPG S LEING VTEFRVAD+THPRAEDIYTILGNLELEIKE REKS + L
Sbjct: 661 DKGLKKTPGCSWLEINGHVTEFRVADRTHPRAEDIYTILGNLELEIKEAREKSPEKL 716

BLAST of Cmc12g0328871 vs. ExPASy TrEMBL
Match: A0A6J1K3Q8 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111490383 PE=4 SV=1)

HSP 1 Score: 1157.9 bits (2994), Expect = 0.0e+00
Identity = 585/721 (81.14%), Postives = 634/721 (87.93%), Query Frame = 0

Query: 1   MLHLQRSKPIIHTPILL----NFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFH 60
           M HLQRSK I  +PI      NFPATQSRLLNTLS LF+RC S Q L+QIHARF+LHGFH
Sbjct: 1   MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH 60

Query: 61  QNPTLSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQM 120
           QNPTLS KLIDCYAN GLL  S  VF SIIDPN TL+NAILRNLTR+GE ER LLVY++M
Sbjct: 61  QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM 120

Query: 121 VAKSMHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAF 180
           VAKSMHPDE+TYPF+ +SC   SNV FG+ IHG L+KLG DS+D V T LAEMY K I F
Sbjct: 121 VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF 180

Query: 181 ENAHQLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFI 240
           ENAHQLFDK SVKDL   SSL +E  QNGNG+ I     RM++E LV DSLTF+NLLR I
Sbjct: 181 ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI 240

Query: 241 AGLNSIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWN 300
           +GL+SIQLAKIVHCIAIVS L GDLLV TAVLSLYSKL SLVDAR+LF+KMPEKDRVVWN
Sbjct: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300

Query: 301 IMIAAYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRN 360
           IMIAAYAREG+P ECLELF+SMARSGIR+DLFTALPVISSI+QLKC DWGKQTHA+ILRN
Sbjct: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN 360

Query: 361 GSDSQVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLF 420
           GSDSQVSVHNSLIDMYCEC  L+SAC IFN +T+K+VISWSAMIKG VK+G  L A SLF
Sbjct: 361 GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420

Query: 421 SKMKSDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKC 480
             MKSDGIQADF+T+INI+PAFV IGALENVKYLHGYS+KL LTSLPSLNTALLITYAKC
Sbjct: 421 FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480

Query: 481 GYIEMAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLG 540
           G IEMAQRLFEEER++DKDLIMWNSMISAHANHGDWSQCFKLYN+MKCSNS PDQVTFLG
Sbjct: 481 GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540

Query: 541 LLTACVNSGLIEKGKEFFKEMTESYGCLPSQEHYACMVNLLGRAGLISEAGELVRNMPIK 600
           LLTACVNSGL+EKGKEFFKEM ESY C PSQEHYACMVNLLGRAGLI+EAGELVRNMPIK
Sbjct: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600

Query: 601 PDARVWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMR 660
           PDARVWGPLLSACK+HPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKW+ VAKMR
Sbjct: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660

Query: 661 SFLRNKGLKKTPGSSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDT 718
           SFLR+KGLKKTPG S LEINGRV EFRVAD+THPRAEDIY ILGNLEL+IKE +E S + 
Sbjct: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720

BLAST of Cmc12g0328871 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 436.4 bits (1121), Expect = 4.4e-122
Identity = 256/707 (36.21%), Postives = 386/707 (54.60%), Query Frame = 0

Query: 7   SKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPTLSSKLI 66
           S P    P   + P    R   +LSLL N C ++Q L+ IHA+ I  G H      SKLI
Sbjct: 14  SYPFHFLPSSSDPPYDSIRNHPSLSLLHN-CKTLQSLRIIHAQMIKIGLHNTNYALSKLI 73

Query: 67  D-CYANLGL--LKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKSMHP 126
           + C  +     L +++ VF +I +PNL ++N + R      +   AL +Y  M++  + P
Sbjct: 74  EFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLP 133

Query: 127 DEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAHQLF 186
           +  T+PF+ +SC+       G+ IHG+++KLG D    V T+L  MY +    E+AH++F
Sbjct: 134 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 193

Query: 187 DKRSVKDLGWSSSLTTEGSQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFIAGLNSIQ 246
           DK   +                                                      
Sbjct: 194 DKSPHR------------------------------------------------------ 253

Query: 247 LAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIAAYA 306
                           D++ YTA++  Y+    + +A++LFD++P KD V WN MI+ YA
Sbjct: 254 ----------------DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYA 313

Query: 307 REGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVS 366
             G  +E LELFK M ++ +R D  T + V+S+ AQ   ++ G+Q H  I  +G  S + 
Sbjct: 314 ETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLK 373

Query: 367 VHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMKSDG 426
           + N+LID+Y +C  L++AC +F  +  K VISW+ +I GY        A  LF +M   G
Sbjct: 374 IVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 433

Query: 427 IQADFVTMINILPAFVHIGALENVKYLHGYSMK--LGLTSLPSLNTALLITYAKCGYIEM 486
              + VTM++ILPA  H+GA++  +++H Y  K   G+T+  SL T+L+  YAKCG IE 
Sbjct: 434 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 493

Query: 487 AQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTAC 546
           A ++F    I  K L  WN+MI   A HG     F L++RM+    +PD +TF+GLL+AC
Sbjct: 494 AHQVFNS--ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSAC 553

Query: 547 VNSGLIEKGKEFFKEMTESYGCLPSQEHYACMVNLLGRAGLISEAGELVRNMPIKPDARV 606
            +SG+++ G+  F+ MT+ Y   P  EHY CM++LLG +GL  EA E++  M ++PD  +
Sbjct: 554 SHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVI 613

Query: 607 WGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLRN 666
           W  LL ACKMH   +L E  AE LI +EP+N G+Y+LLSNIYA+AG+W EVAK R+ L +
Sbjct: 614 WCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLND 647

Query: 667 KGLKKTPGSSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKE 709
           KG+KK PG SS+EI+  V EF + D+ HPR  +IY +L  +E+ +++
Sbjct: 674 KGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647

BLAST of Cmc12g0328871 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 414.8 bits (1065), Expect = 1.4e-115
Identity = 227/679 (33.43%), Postives = 377/679 (55.52%), Query Frame = 0

Query: 31  SLLFNRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLKHSLQVFCSIIDPNL 90
           +LL  RC+S++ L+QI      +G +Q     +KL+  +   G +  + +VF  I     
Sbjct: 41  ALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100

Query: 91  TLFNAILRNLTRYGESERALLVYQQMVAKSMHPDEETYPFIFRSCSSFSNVGFGRTIHGY 150
            L++ +L+   +  + ++AL  + +M    + P    + ++ + C   + +  G+ IHG 
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160

Query: 151 LVKLGFDSFDVVA-TALAEMYEKWIAFENAHQLFDKRSVKDLGWSSSLTTEGSQNGNGEG 210
           LVK GF S D+ A T L  MY K      A ++FD+   +DL   +++    SQNG    
Sbjct: 161 LVKSGF-SLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 220

Query: 211 IFRGFVRMRAEQLVPDSLTFVNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVYTAVLS 270
                  M  E L P  +T V++L  ++ L  I + K +H  A+ S     + + TA++ 
Sbjct: 221 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 280

Query: 271 LYSKLRSLVDARRLFDKMPEKDRVVWNIMIAAYAREGKPRECLELFKSMARSGIRSDLFT 330
           +Y+K  SL  AR+LFD M E++ V WN MI AY +   P+E + +F+ M   G++    +
Sbjct: 281 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 340

Query: 331 ALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKMLDSACNIFNWMT 390
            +  + + A L  ++ G+  H   +  G D  VSV NSLI MYC+CK +D+A ++F  + 
Sbjct: 341 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 400

Query: 391 DKSVISWSAMIKGYVKNGQSLTASSLFSKMKSDGIQADFVTMINILPAFVHIGALENVKY 450
            ++++SW+AMI G+ +NG+ + A + FS+M+S  ++ D  T ++++ A   +    + K+
Sbjct: 401 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 460

Query: 451 LHGYSMKLGLTSLPSLNTALLITYAKCGYIEMAQRLFEEERIDDKDLIMWNSMISAHANH 510
           +HG  M+  L     + TAL+  YAKCG I +A+ +F  + + ++ +  WN+MI  +  H
Sbjct: 461 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF--DMMSERHVTTWNAMIDGYGTH 520

Query: 511 GDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLIEKGKEFFKEMTESYGCLPSQEH 570
           G      +L+  M+    KP+ VTFL +++AC +SGL+E G + F  M E+Y    S +H
Sbjct: 521 GFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDH 580

Query: 571 YACMVNLLGRAGLISEAGELVRNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLIDME 630
           Y  MV+LLGRAG ++EA + +  MP+KP   V+G +L AC++H     AE AAE+L ++ 
Sbjct: 581 YGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELN 640

Query: 631 PKNAGNYILLSNIYAAAGKWEEVAKMRSFLRNKGLKKTPGSSSLEINGRVTEFRVADQTH 690
           P + G ++LL+NIY AA  WE+V ++R  +  +GL+KTPG S +EI   V  F      H
Sbjct: 641 PDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAH 700

Query: 691 PRAEDIYTILGNLELEIKE 709
           P ++ IY  L  L   IKE
Sbjct: 701 PDSKKIYAFLEKLICHIKE 716

BLAST of Cmc12g0328871 vs. TAIR 10
Match: AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )

HSP 1 Score: 406.8 bits (1044), Expect = 3.7e-113
Identity = 231/724 (31.91%), Postives = 398/724 (54.97%), Query Frame = 0

Query: 14  PILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLG 73
           P LLN    QS+           C +I  L+  H      G   + +  +KL+     LG
Sbjct: 23  PSLLN----QSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELG 82

Query: 74  LLKHSLQVFCSIIDPNLT-----LFNAILRNLTRYGESERALLVYQQMVAKSMHPDEETY 133
             + SL     + + + +     ++N+++R     G    A+L++ +M+   + PD+ T+
Sbjct: 83  -TRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTF 142

Query: 134 PFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAHQLFDKRSV 193
           PF   +C+     G G  IHG +VK+G+     V  +L   Y +    ++A ++FD+ S 
Sbjct: 143 PFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE 202

Query: 194 KD-LGWSSSLTTEGSQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFIAGLNSIQLAKI 253
           ++ + W+S +     ++   + +   F  +R E++ P+S+T V ++   A L  ++  + 
Sbjct: 203 RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 262

Query: 254 VHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIAAYAREGK 313
           V+     S +  + L+ +A++ +Y K  ++  A+RLFD+    +  + N M + Y R+G 
Sbjct: 263 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGL 322

Query: 314 PRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNS 373
            RE L +F  M  SG+R D  + L  ISS +QL+ + WGK  H ++LRNG +S  ++ N+
Sbjct: 323 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 382

Query: 374 LIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQ------------------- 433
           LIDMY +C   D+A  IF+ M++K+V++W++++ GYV+NG+                   
Sbjct: 383 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 442

Query: 434 -----SLTASSLF--------SKMKSDGIQADFVTMINILPAFVHIGALENVKYLHGYSM 493
                 L   SLF        S    +G+ AD VTM++I  A  H+GAL+  K+++ Y  
Sbjct: 443 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 502

Query: 494 KLGLTSLPSLNTALLITYAKCGYIEMAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQC 553
           K G+     L T L+  +++CG  E A  +F    + ++D+  W + I A A  G+  + 
Sbjct: 503 KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNS--LTNRDVSAWTAAIGAMAMAGNAERA 562

Query: 554 FKLYNRMKCSNSKPDQVTFLGLLTACVNSGLIEKGKEFFKEMTESYGCLPSQEHYACMVN 613
            +L++ M     KPD V F+G LTAC + GL+++GKE F  M + +G  P   HY CMV+
Sbjct: 563 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 622

Query: 614 LLGRAGLISEAGELVRNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGN 673
           LLGRAGL+ EA +L+ +MP++P+  +W  LL+AC++    ++A +AAEK+  + P+  G+
Sbjct: 623 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 682

Query: 674 YILLSNIYAAAGKWEEVAKMRSFLRNKGLKKTPGSSSLEINGRVTEFRVADQTHPRAEDI 700
           Y+LLSN+YA+AG+W ++AK+R  ++ KGL+K PG+SS++I G+  EF   D++HP   +I
Sbjct: 683 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 739

BLAST of Cmc12g0328871 vs. TAIR 10
Match: AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )

HSP 1 Score: 406.8 bits (1044), Expect = 3.7e-113
Identity = 231/724 (31.91%), Postives = 398/724 (54.97%), Query Frame = 0

Query: 14  PILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLG 73
           P LLN    QS+           C +I  L+  H      G   + +  +KL+     LG
Sbjct: 23  PSLLN----QSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELG 82

Query: 74  LLKHSLQVFCSIIDPNLT-----LFNAILRNLTRYGESERALLVYQQMVAKSMHPDEETY 133
             + SL     + + + +     ++N+++R     G    A+L++ +M+   + PD+ T+
Sbjct: 83  -TRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTF 142

Query: 134 PFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAHQLFDKRSV 193
           PF   +C+     G G  IHG +VK+G+     V  +L   Y +    ++A ++FD+ S 
Sbjct: 143 PFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE 202

Query: 194 KD-LGWSSSLTTEGSQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFIAGLNSIQLAKI 253
           ++ + W+S +     ++   + +   F  +R E++ P+S+T V ++   A L  ++  + 
Sbjct: 203 RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 262

Query: 254 VHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIAAYAREGK 313
           V+     S +  + L+ +A++ +Y K  ++  A+RLFD+    +  + N M + Y R+G 
Sbjct: 263 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGL 322

Query: 314 PRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNS 373
            RE L +F  M  SG+R D  + L  ISS +QL+ + WGK  H ++LRNG +S  ++ N+
Sbjct: 323 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 382

Query: 374 LIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQ------------------- 433
           LIDMY +C   D+A  IF+ M++K+V++W++++ GYV+NG+                   
Sbjct: 383 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 442

Query: 434 -----SLTASSLF--------SKMKSDGIQADFVTMINILPAFVHIGALENVKYLHGYSM 493
                 L   SLF        S    +G+ AD VTM++I  A  H+GAL+  K+++ Y  
Sbjct: 443 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 502

Query: 494 KLGLTSLPSLNTALLITYAKCGYIEMAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQC 553
           K G+     L T L+  +++CG  E A  +F    + ++D+  W + I A A  G+  + 
Sbjct: 503 KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNS--LTNRDVSAWTAAIGAMAMAGNAERA 562

Query: 554 FKLYNRMKCSNSKPDQVTFLGLLTACVNSGLIEKGKEFFKEMTESYGCLPSQEHYACMVN 613
            +L++ M     KPD V F+G LTAC + GL+++GKE F  M + +G  P   HY CMV+
Sbjct: 563 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 622

Query: 614 LLGRAGLISEAGELVRNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGN 673
           LLGRAGL+ EA +L+ +MP++P+  +W  LL+AC++    ++A +AAEK+  + P+  G+
Sbjct: 623 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 682

Query: 674 YILLSNIYAAAGKWEEVAKMRSFLRNKGLKKTPGSSSLEINGRVTEFRVADQTHPRAEDI 700
           Y+LLSN+YA+AG+W ++AK+R  ++ KGL+K PG+SS++I G+  EF   D++HP   +I
Sbjct: 683 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 739

BLAST of Cmc12g0328871 vs. TAIR 10
Match: AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 402.9 bits (1034), Expect = 5.4e-112
Identity = 228/690 (33.04%), Postives = 386/690 (55.94%), Query Frame = 0

Query: 23  QSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLKHSLQVF 82
           +S+ ++ +  LF  C ++Q  + +HAR ++    QN  +S+KL++ Y  LG +  +   F
Sbjct: 50  ESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTF 109

Query: 83  CSIIDPNLTLFNAILRNLTRYGESERALLVYQQ-MVAKSMHPDEETYPFIFRSCSSFSNV 142
             I + ++  +N ++    R G S   +  +   M++  + PD  T+P + ++C +  + 
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID- 169

Query: 143 GFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAHQLFDKRSVKDLGWSSSLTTEG 202
             G  IH   +K GF     VA +L  +Y ++ A  NA  LFD+  V+D+G  +++ +  
Sbjct: 170 --GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 229

Query: 203 SQNGNGEGIFRGFVRMRAEQLVPDSLTFVNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDL 262
            Q+GN +        +RA     DS+T V+LL              +H  +I   L  +L
Sbjct: 230 CQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 289

Query: 263 LVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIAAYAREGKPRECLELFKSMARS 322
            V   ++ LY++   L D +++FD+M  +D + WN +I AY    +P   + LF+ M  S
Sbjct: 290 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 349

Query: 323 GIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNG-SDSQVSVHNSLIDMYCECKMLDS 382
            I+ D  T + + S ++QL  +   +      LR G     +++ N+++ MY +  ++DS
Sbjct: 350 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 409

Query: 383 ACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMKSDG-IQADFVTMINILPAFV 442
           A  +FNW+ +  VISW+ +I GY +NG +  A  +++ M+ +G I A+  T +++LPA  
Sbjct: 410 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 469

Query: 443 HIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIEMAQRLFEEERIDDKDLIMW 502
             GAL     LHG  +K GL     + T+L   Y KCG +E A  LF +  I   + + W
Sbjct: 470 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQ--IPRVNSVPW 529

Query: 503 NSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLIEKGKEFFKEMTE 562
           N++I+ H  HG   +   L+  M     KPD +TF+ LL+AC +SGL+++G+  F+ M  
Sbjct: 530 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQT 589

Query: 563 SYGCLPSQEHYACMVNLLGRAGLISEAGELVRNMPIKPDARVWGPLLSACKMHPGSKLAE 622
            YG  PS +HY CMV++ GRAG +  A + +++M ++PDA +WG LLSAC++H    L +
Sbjct: 590 DYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGK 649

Query: 623 FAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLRNKGLKKTPGSSSLEINGRV 682
            A+E L ++EP++ G ++LLSN+YA+AGKWE V ++RS    KGL+KTPG SS+E++ +V
Sbjct: 650 IASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKV 709

Query: 683 TEFRVADQTHPRAEDIYTILGNLELEIKEV 710
             F   +QTHP  E++Y  L  L+ ++K +
Sbjct: 710 EVFYTGNQTHPMYEEMYRELTALQAKLKMI 730