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Cmc12g0328841 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCCTACCTGGCGACCAGGAAGTCCAATTTTGTTGGCAAAAAAAAAAAAAGGCATAATCGTTTTCCCTCTCGCCGTCGCTACTGCATTTTGTTCTCCGTTCAACGGGCGTCGATCGGATCACTTCCTCGTACCTCTCAAGATCCGCTCCACACCCATCTCCATGGTAATTTCCTTTTCTCTTCGTCTTACTCATGTCTTGATTGAACTCTTTTATATTTTCACGATACGTTCTCCTAATCTGCATTTTAATTTTTCATCTTCATGTCAGAATTTAACCTAATCAACTGAGAGTTTGTGGGTCGGTGTTAGTTTTTGATGATTATTAGACAACCAACTTGTTTTTACTTCCGTTTGGATGTGTTTACATGTCTTTTTTAGGATTTTTCTTGTTGATTATTGCAATTATCGGTCTATCTTTTTGTGTTCTCATATGAATCAAATTCAAGTTGCATGTTGTGCATTGCACATTTCTTCAGTTCTGCCCCCACTACTCGGTTGGGTGACGTCTACTTTTCAATGGGTGGTTTTCTATTTAAGCGGATAAAATCGGGCCTAACAGTGTTTCTGATCTTAATTATGATATAATGTCTGATTGCTTACGTTGTTGGGTCTTCATTGCCTGATAGTCTTGGTGTGAATTCAATTCTGTTTAACGAAATTCAGTTCTCTCATTCAAATTTGGCAAAAGAATTTCTCAAATTTGCCAAGACCAGATTCTTCAATGGGAGTTAGGTTTTGTAACAAACTTCCTTTCAATGTATTTATTCCTTAAGGGTGGAAAATAATCAAATAATATGTATCTAACGGTAGAAGGTATTGGATGAACTAAGATAGAAGGTTCAAGTGCTGTGTCACATCATTTGGCCCCTTGAACATTGCACTCGCCCGTGGGTTTATTTGGCCAATTCGTATTCTTATGGGGCGTGATACTTTGATAAGTCTTTGAGTAGCTAAACTATAAAAATGTGTTAATTGTTTGGTATTCAAATCATATCCCATAGTTTGTTATAAGTTCCAATTGGACTAGATGTACCACCCTATAGTTCTCTGGGAATTGCTTGGTTCACCCGTGCTTGTTTGGAGCTCTGCATATTTTGCATTACGCATACAAAGTTTTTTTCTTCTGGCACTTCCTCATGCAACCTATTAATTTTCTCTGCCAATGGTCAGAAAAGAAAGAATTTAGGATCTCTCTCACTAGAGGCTTTATATTTAGACTTAACTTTCCTGTTGTTGAATTTGAATCTGTATTGAGCTAAAGTCCTGGTGTTGGGGTGTTTTTTATTCCAGCATATCAATGGCCTAATAGGTTCCCCAATGTTTTCTTTGTAACTTTGTCTGATAAAATTATCTTTCATTGAATTGAAAAGCTAGATCAACCCTTATGGTTTGTTGATCACTAACCATACAAATTATTTCTTCAAACGAGAAGTGATCCCACTGTTTGTATACGCTCACCAAGGTATACAGTTATTGTCTTTTTGCTGCTACGTACTCCAACATTTTCTAGGCTCACTTAGCTTCTTTGCTCTCATTAGGCAAACCAATTTAAAAGGTTTCCGTTTCAGGGTTCCAAAACCTTGCTGCTGCACTTGACTTAAATGAAACCTGCCACTAGAGCTAACGTATTGCACATTTGAAAGGAAAGAAACAACAGAATTTTCAATGACAAGTATAGACCTTTTGTAAATTTTATGATGTTATTAAGTAAAAAACTGTGACACACCTAAAGTGCCTTACAGATAGTATGTAGATGCGCACAGATTTTTTTAATTAGTTCACTTGTACGGTATAGGGCTATTTCTTTACAAGGAGACTTCACAAAGGCAGCACTATGTCTCTAAACAAGTGGTGCCTGATAGTATTTCTTATGCCAATTCACCCATGTTATAGCTTGCTGTAGCATTCTTGTCCTTTAACTTGTTAAGGTATTATAACCTTGACAAAAATTCAGAGGTTTGGATTCCCACTCCCACATATTCTTTACTCAAAAGAAGAAAAAGGAAAGAAAGAAAACTAAACTATAGGGCAGAAGAGATAAACAACAATAAGTTGAAATAACAGAACCATGACAATGCGACCCCCGAAAAAGATCATAAACAGAAAATGCTCACATGAAGAAGAGATTATGTATTTTCACCCCATTTAATTCAAAATTAGGTAAATAATGGTGCTAAATTAATCACATTTCATAGGACTATTAGAAACTGTCTCTTGCTTCCTGGCTAGATATTTTTATGAAAGTATCTGTTTCTTGTCAACCGCTGTAAAAGATGTCAGATTTCCAGTGGGTAAATTCAATCTGAGGTTTGGCCCAAGATAGACTATTGGAATTGTGTGCAGTTGCCAAAAATTCACTACATTGTGGAATGTTATTGCAACGTCCTGATTCTACTTGGATTTAATGCGTAAGATGAGGATTGTGGTGCTTCCACGTCACTTTGAGGATTAGTGGAAGATTGCAAATTTATTGAAGGTGTATGCATGTATACTATTTGCATCTGAAAAAAAAACTCCAAAAATGTCTAGCAACATCATTAAATAAATGGAAAAGTGACAACTACATATTATCTGCTAAAGAACAATAGAAAAAACAGTAAGCATGGTTGCTATATCAAGTTTAGCCATTTTCTTGATGATCTTTGGACCAAACTTGAATTGTCTTGACTTATGGAATTTATTTGTCCGAATAGCGAGATGTGAATAATAGCATTATTTGTTTCACTGGTATTTGGACCATAATGAAAATTGCTTGATCTCTGGCCTTTTTCCATCCAAATTCTGACATGTATGCATCATTAGCATTCTATGTTTCATTAAACAACAAAATACTTTGGATTGATTATGACCTTGTTAAGTTCTTATTTTTTTGATTTAGGTTCTACTGCAGCTAGACCCTTTCCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACCGAGAAGGGTTCAGTTTGGGTTACTCTAAAACGATGTATGTGCATATCAGTGTTTTCTTTAAAATTAATTTCATATATTTTTGTGGTAATCTTTAGGAGTCTGATTAGGTTCAAACTCTATTGTCTCTGATTAATGTAGCATCATTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATTGAGTATAGGTGCCTCATCCGTGCTACAGATGGGAAGAAGACAATTTCAACTTCAGTAAGTATCGACTCATCTTTTAAGCTTGTTTCTCCCTCCCCTTTCTATCTTTTCTGAATTGAGAACTTTGCAAAAGCATTCAAGTTTTTGTAGTAAATTCTAAATTTTTACTCAGGCTGAAGCAAGTCTCTCTGAATTGAAGAATGCTGTGTTTAGACATCGTTTCTTTTTACTCTATTTATGTTCTACTTTAGTTTTGTATTACAACTCAATGCAACACAGGAGTGAGGGTGAAGTAATATATGGATTCTACCCCCTTTTCATCGTCACTCAATGCTTTATGAATTAGTTTTTTCTTCTGCTTGAGCTTTGAATCATCCTTTACTCAGTTCATTGTTTTTAGAGAACAGAAGAACCAAACCCCTTCTGTAGGACTTCAATCAGCATATTGCCCTTTCACATTCTTCAGATCTTATTATCTGTTTCTAACTTTCTTGAATCTGAAACATTTGTAACAACTTCTGCTGAACTGGGTAGGTTGGAGCAAAAGATCATCTGAGATTTCAAGCTTCGTATTCAACCATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGAGAGAGAAAGGACAAGAAGAAGGCAGCAGAGGCGGAGAAGGGTCTGAAGAAAAAACCCAGGAAAGTATAAAAGGAGGGCTCTTTTTTTGCTTCTGTAGGTTACTCAAACCATTGTAACTTCCTTCTCTTCGTTACCCTTGTTTTTCATTCCTTTAACTTGATGAGTGTTATGCTTCCCCCATATTTCTAGCAAAACGCAGAGGAAAGGGGAGGTAGGATTTTGGAGCTTCAGGAACTGAAAAATATTCGATCTTGTCATTTGTTTAGCCTTTTTTTTTTCTTTAACTTAAAAGATTTAAATTATACATGTGATTTTACTGTGGAATTGTCTGGAAGTT CCCCTACCTGGCGACCAGGAAGTCCAATTTTGTTGGCAAAAAAAAAAAAAGGCATAATCGTTTTCCCTCTCGCCGTCGCTACTGCATTTTGTTCTCCGTTCAACGGGCGTCGATCGGATCACTTCCTCGTACCTCTCAAGATCCGCTCCACACCCATCTCCATGGTTCTACTGCAGCTAGACCCTTTCCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACCGAGAAGGGTTCAGTTTGGGTTACTCTAAAACGATCATCATTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATTGAGTATAGGTGCCTCATCCGTGCTACAGATGGGAAGAAGACAATTTCAACTTCAGTTGGAGCAAAAGATCATCTGAGATTTCAAGCTTCGTATTCAACCATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGAGAGAGAAAGGACAAGAAGAAGGCAGCAGAGGCGGAGAAGGGTCTGAAGAAAAAACCCAGGAAAGTATAAAAGGAGGGCTCTTTTTTTGCTTCTGTAGGTTACTCAAACCATTGTAACTTCCTTCTCTTCGTTACCCTTGTTTTTCATTCCTTTAACTTGATGAGTGTTATGCTTCCCCCATATTTCTAGCAAAACGCAGAGGAAAGGGGAGGTAGGATTTTGGAGCTTCAGGAACTGAAAAATATTCGATCTTGTCATTTGTTTAGCCTTTTTTTTTTCTTTAACTTAAAAGATTTAAATTATACATGTGATTTTACTGTGGAATTGTCTGGAAGTT ATGGTTCTACTGCAGCTAGACCCTTTCCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACCGAGAAGGGTTCAGTTTGGGTTACTCTAAAACGATCATCATTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATTGAGTATAGGTGCCTCATCCGTGCTACAGATGGGAAGAAGACAATTTCAACTTCAGTTGGAGCAAAAGATCATCTGAGATTTCAAGCTTCGTATTCAACCATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGAGAGAGAAAGGACAAGAAGAAGGCAGCAGAGGCGGAGAAGGGTCTGAAGAAAAAACCCAGGAAAGTATAA MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV Homology
BLAST of Cmc12g0328841 vs. NCBI nr
Match: KGN66307.2 (hypothetical protein Csa_023187 [Cucumis sativus]) HSP 1 Score: 219.5 bits (558), Expect = 1.5e-53 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Cmc12g0328841 vs. NCBI nr
Match: XP_004145229.1 (signal recognition particle 14 kDa protein [Cucumis sativus] >XP_008444601.1 PREDICTED: signal recognition particle 14 kDa protein [Cucumis melo] >XP_023001491.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita maxima] >XP_023001492.1 signal recognition particle 14 kDa protein-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 219.5 bits (558), Expect = 1.5e-53 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Cmc12g0328841 vs. NCBI nr
Match: KAG7019502.1 (Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 219.5 bits (558), Expect = 1.5e-53 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Cmc12g0328841 vs. NCBI nr
Match: XP_023519243.1 (signal recognition particle 14 kDa protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 218.4 bits (555), Expect = 3.3e-53 Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Cmc12g0328841 vs. NCBI nr
Match: KAA0054008.1 (signal recognition particle 14 kDa protein [Cucumis melo var. makuwa] >TYK20693.1 signal recognition particle 14 kDa protein [Cucumis melo var. makuwa]) HSP 1 Score: 218.0 bits (554), Expect = 4.3e-53 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Cmc12g0328841 vs. ExPASy Swiss-Prot
Match: O04421 (Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP14 PE=2 SV=2) HSP 1 Score: 181.0 bits (458), Expect = 7.7e-45 Identity = 93/109 (85.32%), Postives = 103/109 (94.50%), Query Frame = 0
BLAST of Cmc12g0328841 vs. ExPASy Swiss-Prot
Match: O04433 (Signal recognition particle 14 kDa protein OS=Oryza sativa subsp. japonica OX=39947 GN=SRP14 PE=2 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 2.6e-37 Identity = 81/117 (69.23%), Postives = 100/117 (85.47%), Query Frame = 0
BLAST of Cmc12g0328841 vs. ExPASy Swiss-Prot
Match: P37108 (Signal recognition particle 14 kDa protein OS=Homo sapiens OX=9606 GN=SRP14 PE=1 SV=2) HSP 1 Score: 90.1 bits (222), Expect = 1.8e-17 Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of Cmc12g0328841 vs. ExPASy Swiss-Prot
Match: Q4R5C7 (Signal recognition particle 14 kDa protein OS=Macaca fascicularis OX=9541 GN=SRP14 PE=2 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.8e-17 Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of Cmc12g0328841 vs. ExPASy Swiss-Prot
Match: Q5RBX7 (Signal recognition particle 14 kDa protein OS=Pongo abelii OX=9601 GN=SRP14 PE=2 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.8e-17 Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of Cmc12g0328841 vs. ExPASy TrEMBL
Match: A0A6J1KGP7 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495612 PE=3 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 7.2e-54 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Cmc12g0328841 vs. ExPASy TrEMBL
Match: A0A0A0LYE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534730 PE=3 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 7.2e-54 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Cmc12g0328841 vs. ExPASy TrEMBL
Match: A0A1S3BBI8 (signal recognition particle 14 kDa protein OS=Cucumis melo OX=3656 GN=LOC103487869 PE=3 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 7.2e-54 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Cmc12g0328841 vs. ExPASy TrEMBL
Match: A0A5A7UG42 (Signal recognition particle 14 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00850 PE=3 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.1e-53 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Cmc12g0328841 vs. ExPASy TrEMBL
Match: A0A6J1EG32 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434001 PE=3 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 2.7e-53 Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Cmc12g0328841 vs. TAIR 10
Match: AT2G43640.1 (Signal recognition particle, SRP9/SRP14 subunit ) HSP 1 Score: 181.0 bits (458), Expect = 5.5e-46 Identity = 93/109 (85.32%), Postives = 103/109 (94.50%), Query Frame = 0
BLAST of Cmc12g0328841 vs. TAIR 10
Match: AT2G43640.2 (Signal recognition particle, SRP9/SRP14 subunit ) HSP 1 Score: 181.0 bits (458), Expect = 5.5e-46 Identity = 93/109 (85.32%), Postives = 103/109 (94.50%), Query Frame = 0
BLAST of Cmc12g0328841 vs. TAIR 10
Match: AT2G43640.3 (Signal recognition particle, SRP9/SRP14 subunit ) HSP 1 Score: 153.7 bits (387), Expect = 9.3e-38 Identity = 83/109 (76.15%), Postives = 94/109 (86.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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