Cmc12g0327711 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGCAGGGTATTAACACTGTTGGCATAATACGAGCACCCCAAGCAGATGGAAAGGAAGCCATTGTTTTGGTGACACCTTACAATCCTGTTGAGACCAGTCTTCAGTTCATTTTCTAGGAGATTGTTGTTTAGGGTTCATTTAATGAAAGGGCAAAGGATGTTTTTATTTATGTCTATAATTGGGATTATTTTCACTTAAATTATCTATGTTCTTCTTGCCATTAGGCTGTGGGTATTCCTACTGGTTCTCATGGGGCTTTTCGAGATTACCAAATTGATGCAATTACTGTGGAGATGTCCCCCAAATTTTCTTCTAGTGTCAAGATCAGGCGTGATGATTTCATACTGCGAGGTGGCCGGTCAGTGCTCATTTTTGCCTCGTGCATTTGATAACGTGTCCTCTCACCCTCAACTTTTCAGGGTTCACTACATGAATAAATGCTTAAAACCCATGATCTCCTGAATGAAGTTAGGTCAACATCAACTAATATTATTCTACTTCTTTTAAATTCTACATTATTTTCCATTTTTATCCACGTGTTTCACTGTCAATCTTCAACGTTGAAGTTCTAATTTGTTAATTGTTTTATTGGGAATAAGAGAGTATTTTTCGTTTTCTAAAACATACTTCGATTGACTGATGGGTTCTCCTTTTAAATGAATAGAATATACCTGTTATTCATTCTAGTGAATTTGTTGCCTAAATTCATATTCATGTATGGAAATGAGTTAGATTTTGATGCATTGAATTATCGCCCAGATTTTTATGCATTAGTGAGTTAGATTTTCATACAGGGAAATGAGCCTAATCCCTGCATGCTGGCAACGAAATTCTCCTGATCCTTTTGATTTGGCTAAAGATTTTGTGGTTGGTTATGCAGGCTAATTGAAGGAGTTGTACGGTCAGTAAACAACCTCCTGGAGAAGTTCCATCAGTCATTCTTTCTATACCTTATGGTATCCACTGGCAAATTTGTATCGGTTGGTGTATATATGATTGCCTTTGCTCTGCTTGTTGCTCCACTACCAGCAGTTGCGGCCGCTCTCTATTCCCATGCCAATAACTTAAATCTAACCTCGGAAAAGGTCAAACCTCCAGCTCCAGCAAATCCTGATGATGAGCTTATTGTCTCTTTAAGATCATGGAAATGGCTTAATGCAGCTAAAAGAGTTTTTGTTGTTCATTTATGGGGGGCTGTTGTTTCCTTACTTCCCTACTTCATCTGCCAAATACCTGGTTACAGTCCTATAGAGAACTCTATTATATGGGGGTTGCTTTCACTGCTTGCACTACTAGTTTTGTCTGATAGAAGATGA ATGACGCAGGGTATTAACACTGTTGGCATAATACGAGCACCCCAAGCAGATGGAAAGGAAGCCATTGTTTTGGTGACACCTTACAATCCTGCTGTGGGTATTCCTACTGGTTCTCATGGGGCTTTTCGAGATTACCAAATTGATGCAATTACTGTGGAGATGTCCCCCAAATTTTCTTCTAGTGTCAAGATCAGGCGTGATGATTTCATACTGCGAGGTGGCCGGCTAATTGAAGGAGTTGTACGGTCAGTAAACAACCTCCTGGAGAAGTTCCATCAGTCATTCTTTCTATACCTTATGGTATCCACTGGCAAATTTGTATCGGTTGGTGTATATATGATTGCCTTTGCTCTGCTTGTTGCTCCACTACCAGCAGTTGCGGCCGCTCTCTATTCCCATGCCAATAACTTAAATCTAACCTCGGAAAAGGTCAAACCTCCAGCTCCAGCAAATCCTGATGATGAGCTTATTGTCTCTTTAAGATCATGGAAATGGCTTAATGCAGCTAAAAGAGTTTTTGTTGTTCATTTATGGGGGGCTGTTGTTTCCTTACTTCCCTACTTCATCTGCCAAATACCTGGTTACAGTCCTATAGAGAACTCTATTATATGGGGGTTGCTTTCACTGCTTGCACTACTAGTTTTGTCTGATAGAAGATGA ATGACGCAGGGTATTAACACTGTTGGCATAATACGAGCACCCCAAGCAGATGGAAAGGAAGCCATTGTTTTGGTGACACCTTACAATCCTGCTGTGGGTATTCCTACTGGTTCTCATGGGGCTTTTCGAGATTACCAAATTGATGCAATTACTGTGGAGATGTCCCCCAAATTTTCTTCTAGTGTCAAGATCAGGCGTGATGATTTCATACTGCGAGGTGGCCGGCTAATTGAAGGAGTTGTACGGTCAGTAAACAACCTCCTGGAGAAGTTCCATCAGTCATTCTTTCTATACCTTATGGTATCCACTGGCAAATTTGTATCGGTTGGTGTATATATGATTGCCTTTGCTCTGCTTGTTGCTCCACTACCAGCAGTTGCGGCCGCTCTCTATTCCCATGCCAATAACTTAAATCTAACCTCGGAAAAGGTCAAACCTCCAGCTCCAGCAAATCCTGATGATGAGCTTATTGTCTCTTTAAGATCATGGAAATGGCTTAATGCAGCTAAAAGAGTTTTTGTTGTTCATTTATGGGGGGCTGTTGTTTCCTTACTTCCCTACTTCATCTGCCAAATACCTGGTTACAGTCCTATAGAGAACTCTATTATATGGGGGTTGCTTTCACTGCTTGCACTACTAGTTTTGTCTGATAGAAGATGA MTQGINTVGIIRAPQADGKEAIVLVTPYNPAVGIPTGSHGAFRDYQIDAITVEMSPKFSSSVKIRRDDFILRGGRLIEGVVRSVNNLLEKFHQSFFLYLMVSTGKFVSVGVYMIAFALLVAPLPAVAAALYSHANNLNLTSEKVKPPAPANPDDELIVSLRSWKWLNAAKRVFVVHLWGAVVSLLPYFICQIPGYSPIENSIIWGLLSLLALLVLSDRR Homology
BLAST of Cmc12g0327711 vs. NCBI nr
Match: TYK03095.1 (glycosylphosphatidylinositol anchor attachment 1 protein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 362.1 bits (928), Expect = 3.4e-96 Identity = 187/208 (89.90%), Postives = 193/208 (92.79%), Query Frame = 0
BLAST of Cmc12g0327711 vs. NCBI nr
Match: TYK03095.1 (glycosylphosphatidylinositol anchor attachment 1 protein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 63.9 bits (154), Expect = 1.9e-06 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
HSP 2 Score: 362.1 bits (928), Expect = 3.4e-96 Identity = 187/208 (89.90%), Postives = 193/208 (92.79%), Query Frame = 0
BLAST of Cmc12g0327711 vs. NCBI nr
Match: KAA0037577.1 (glycosylphosphatidylinositol anchor attachment 1 protein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 63.9 bits (154), Expect = 1.9e-06 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
HSP 2 Score: 359.8 bits (922), Expect = 1.7e-95 Identity = 185/208 (88.94%), Postives = 192/208 (92.31%), Query Frame = 0
BLAST of Cmc12g0327711 vs. NCBI nr
Match: XP_008458804.1 (PREDICTED: glycosylphosphatidylinositol anchor attachment 1 protein isoform X1 [Cucumis melo]) HSP 1 Score: 63.9 bits (154), Expect = 1.9e-06 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
HSP 2 Score: 359.8 bits (922), Expect = 1.7e-95 Identity = 185/208 (88.94%), Postives = 192/208 (92.31%), Query Frame = 0
BLAST of Cmc12g0327711 vs. NCBI nr
Match: XP_008458805.1 (PREDICTED: glycosylphosphatidylinositol anchor attachment 1 protein isoform X2 [Cucumis melo]) HSP 1 Score: 63.9 bits (154), Expect = 1.9e-06 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
HSP 2 Score: 354.0 bits (907), Expect = 9.4e-94 Identity = 182/208 (87.50%), Postives = 192/208 (92.31%), Query Frame = 0
BLAST of Cmc12g0327711 vs. ExPASy Swiss-Prot
Match: O43292 (Glycosylphosphatidylinositol anchor attachment 1 protein OS=Homo sapiens OX=9606 GN=GPAA1 PE=1 SV=3) HSP 1 Score: 73.2 bits (178), Expect = 4.2e-12 Identity = 48/132 (36.36%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of Cmc12g0327711 vs. ExPASy Swiss-Prot
Match: Q9WTK3 (Glycosylphosphatidylinositol anchor attachment 1 protein OS=Mus musculus OX=10090 GN=Gpaa1 PE=1 SV=3) HSP 1 Score: 71.2 bits (173), Expect = 1.6e-11 Identity = 48/132 (36.36%), Postives = 73/132 (55.30%), Query Frame = 0
BLAST of Cmc12g0327711 vs. ExPASy Swiss-Prot
Match: Q9US48 (GPI transamidase component gaa1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gaa1 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.2e-08 Identity = 36/91 (39.56%), Postives = 49/91 (53.85%), Query Frame = 0
BLAST of Cmc12g0327711 vs. ExPASy Swiss-Prot
Match: P39012 (GPI transamidase component GAA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GAA1 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 7.7e-06 Identity = 32/71 (45.07%), Postives = 49/71 (69.01%), Query Frame = 0
BLAST of Cmc12g0327711 vs. ExPASy TrEMBL
Match: A0A5A7T7Q0 (Glycosylphosphatidylinositol anchor attachment 1 protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002100 PE=4 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 1.7e-96 Identity = 187/208 (89.90%), Postives = 193/208 (92.79%), Query Frame = 0
BLAST of Cmc12g0327711 vs. ExPASy TrEMBL
Match: A0A5A7T7Q0 (Glycosylphosphatidylinositol anchor attachment 1 protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002100 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 9.4e-07 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
HSP 2 Score: 362.1 bits (928), Expect = 1.7e-96 Identity = 187/208 (89.90%), Postives = 193/208 (92.79%), Query Frame = 0
BLAST of Cmc12g0327711 vs. ExPASy TrEMBL
Match: A0A5D3BVI8 (Glycosylphosphatidylinositol anchor attachment 1 protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00170 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 9.4e-07 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
HSP 2 Score: 359.8 bits (922), Expect = 8.3e-96 Identity = 185/208 (88.94%), Postives = 192/208 (92.31%), Query Frame = 0
BLAST of Cmc12g0327711 vs. ExPASy TrEMBL
Match: A0A1S3C9A0 (glycosylphosphatidylinositol anchor attachment 1 protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498104 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 9.4e-07 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
HSP 2 Score: 359.8 bits (922), Expect = 8.3e-96 Identity = 185/208 (88.94%), Postives = 192/208 (92.31%), Query Frame = 0
BLAST of Cmc12g0327711 vs. ExPASy TrEMBL
Match: A0A1S3C9Y7 (glycosylphosphatidylinositol anchor attachment 1 protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498104 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 9.4e-07 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
HSP 2 Score: 354.0 bits (907), Expect = 4.5e-94 Identity = 182/208 (87.50%), Postives = 192/208 (92.31%), Query Frame = 0
BLAST of Cmc12g0327711 vs. TAIR 10
Match: AT5G19130.1 (GPI transamidase component family protein / Gaa1-like family protein ) HSP 1 Score: 216.9 bits (551), Expect = 1.7e-56 Identity = 116/207 (56.04%), Postives = 147/207 (71.01%), Query Frame = 0
HSP 2 Score: 45.4 bits (106), Expect = 6.6e-05 Identity = 19/26 (73.08%), Postives = 23/26 (88.46%), Query Frame = 0
BLAST of Cmc12g0327711 vs. TAIR 10
Match: AT5G19130.2 (GPI transamidase component family protein / Gaa1-like family protein ) HSP 1 Score: 216.9 bits (551), Expect = 1.7e-56 Identity = 116/207 (56.04%), Postives = 147/207 (71.01%), Query Frame = 0
HSP 2 Score: 45.4 bits (106), Expect = 6.6e-05 Identity = 19/26 (73.08%), Postives = 23/26 (88.46%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
Pages
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|