Homology
BLAST of Cmc12g0326961 vs. NCBI nr
Match:
KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 506.5 bits (1303), Expect = 1.4e-139
Identity = 250/265 (94.34%), Postives = 256/265 (96.60%), Query Frame = 0
Query: 1 MTLKVGTRDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
MTLKVGT DVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM
Sbjct: 233 MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 292
Query: 61 NEAFISKNGVHICSAKLEDNLYVLRPNEAKTVLNHEVFRTANTQNKRQIISPNNNTYLWH 120
NEAFI KNGVHICSAKLE+NLYVLRPNEAK VLNHE+FRTANTQNKRQ ISPNNNTYLWH
Sbjct: 293 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 352
Query: 121 LRLGHINLDRVRRLVKNGRLNKLEDDSLPPCESCLEGKMTKRPFTRKGYRAKEPLELIHS 180
LRLGHINLDR+ RLVKNG LNKL+D SLPPCESCLEGKMTKRPFT KGYRAKEPLELIHS
Sbjct: 353 LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 412
Query: 181 DLCGPMNVKARGGFKYLISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKARGGF+Y ISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI
Sbjct: 413 DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 472
Query: 241 LRSDRGGEYMNLRFQDYMIEHGIQS 266
LRSDRGGEYM+LRFQDYMIEHGIQS
Sbjct: 473 LRSDRGGEYMDLRFQDYMIEHGIQS 497
BLAST of Cmc12g0326961 vs. NCBI nr
Match:
KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 497.7 bits (1280), Expect = 6.4e-137
Identity = 246/265 (92.83%), Postives = 253/265 (95.47%), Query Frame = 0
Query: 1 MTLKVGTRDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
MTLKVGT DVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM
Sbjct: 233 MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 292
Query: 61 NEAFISKNGVHICSAKLEDNLYVLRPNEAKTVLNHEVFRTANTQNKRQIISPNNNTYLWH 120
NEAFI KNGVHICSAKLE+NLYVLRPNEAK VLNHE+FRTANTQNKRQ ISPNNNTYLWH
Sbjct: 293 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 352
Query: 121 LRLGHINLDRVRRLVKNGRLNKLEDDSLPPCESCLEGKMTKRPFTRKGYRAKEPLELIHS 180
LRLGHINLDR+ RLVK+G LNKL+D SLPPCESCLEGKMTKRPFT KGYRAKEPLELIHS
Sbjct: 353 LRLGHINLDRIGRLVKDGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 412
Query: 181 DLCGPMNVKARGGFKYLISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKARG F+Y ISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI
Sbjct: 413 DLCGPMNVKARGSFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 472
Query: 241 LRSDRGGEYMNLRFQDYMIEHGIQS 266
RSDRGGEYM+L FQDYMIEHGIQS
Sbjct: 473 FRSDRGGEYMDLIFQDYMIEHGIQS 497
BLAST of Cmc12g0326961 vs. NCBI nr
Match:
KAA0060534.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK00774.1 gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 497.3 bits (1279), Expect = 8.3e-137
Identity = 245/265 (92.45%), Postives = 252/265 (95.09%), Query Frame = 0
Query: 1 MTLKVGTRDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
M LKVGT DVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSI+FSM
Sbjct: 205 MILKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSISFSM 264
Query: 61 NEAFISKNGVHICSAKLEDNLYVLRPNEAKTVLNHEVFRTANTQNKRQIISPNNNTYLWH 120
NEAFISKNGVHICS KLEDNLYVL+PNE K VLNHE+FRTANTQNKRQ IS NNNTYLWH
Sbjct: 265 NEAFISKNGVHICSVKLEDNLYVLKPNEGKAVLNHEMFRTANTQNKRQRISSNNNTYLWH 324
Query: 121 LRLGHINLDRVRRLVKNGRLNKLEDDSLPPCESCLEGKMTKRPFTRKGYRAKEPLELIHS 180
LRLGHINLDR+ RLVKNG LNKLEDDSLPPCESCLEGKMTKRPFT KGYRAKEPLELIHS
Sbjct: 325 LRLGHINLDRIGRLVKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 384
Query: 181 DLCGPMNVKARGGFKYLISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKA GGF+Y ISFIDDYS YGYLYL+EHKSEALEKFKEYKTEVENLLSKKIKI
Sbjct: 385 DLCGPMNVKAIGGFEYFISFIDDYSMYGYLYLIEHKSEALEKFKEYKTEVENLLSKKIKI 444
Query: 241 LRSDRGGEYMNLRFQDYMIEHGIQS 266
LRSDRGGEYM+LRFQDYMIEHGIQS
Sbjct: 445 LRSDRGGEYMDLRFQDYMIEHGIQS 469
BLAST of Cmc12g0326961 vs. NCBI nr
Match:
KAA0067938.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 479.6 bits (1233), Expect = 1.8e-131
Identity = 241/265 (90.94%), Postives = 246/265 (92.83%), Query Frame = 0
Query: 1 MTLKVGTRDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
MTL VGT DVISARAVGD KLFFG KFMFLENLYIVPKIKRNLV VSCLIEHMYSINFSM
Sbjct: 208 MTLMVGTGDVISARAVGDVKLFFGIKFMFLENLYIVPKIKRNLVFVSCLIEHMYSINFSM 267
Query: 61 NEAFISKNGVHICSAKLEDNLYVLRPNEAKTVLNHEVFRTANTQNKRQIISPNNNTYLWH 120
NEAFISKNG AKLEDNLYVLRPNEAK VLNHE+FRTANTQNKRQ ISPNNNTYLWH
Sbjct: 268 NEAFISKNG-----AKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 327
Query: 121 LRLGHINLDRVRRLVKNGRLNKLEDDSLPPCESCLEGKMTKRPFTRKGYRAKEPLELIHS 180
LRL HINLDR+ RLVKNG LNKL+DDSLPPCESCLEGKMTKRPFT K YRAKEPLELIHS
Sbjct: 328 LRLDHINLDRIGRLVKNGLLNKLKDDSLPPCESCLEGKMTKRPFTGKDYRAKEPLELIHS 387
Query: 181 DLCGPMNVKARGGFKYLISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKARGGF+Y ISFIDDYSRYGYLYLMEHK EALEKFKEYKTEVENLLSKKIKI
Sbjct: 388 DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKYEALEKFKEYKTEVENLLSKKIKI 447
Query: 241 LRSDRGGEYMNLRFQDYMIEHGIQS 266
LRSDRGGEYM+LRFQDYMIEHGIQS
Sbjct: 448 LRSDRGGEYMDLRFQDYMIEHGIQS 467
BLAST of Cmc12g0326961 vs. NCBI nr
Match:
KAA0046415.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 385.2 bits (988), Expect = 4.6e-103
Identity = 186/265 (70.19%), Postives = 222/265 (83.77%), Query Frame = 0
Query: 1 MTLKVGTRDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
MT++VGT VISA AVG +L F+ LEN+Y+VP +KRNL+SV CL+E YS+ F++
Sbjct: 336 MTMRVGTGHVISAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNV 395
Query: 61 NEAFISKNGVHICSAKLEDNLYVLRPNEAKTVLNHEVFRTANTQNKRQIISPNNNTYLWH 120
N+ FI KNGV ICSAKLE+NLYVLR +K +LN E+F+TA TQNKR ISP N +LWH
Sbjct: 396 NKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWH 455
Query: 121 LRLGHINLDRVRRLVKNGRLNKLEDDSLPPCESCLEGKMTKRPFTRKGYRAKEPLELIHS 180
LRLGHINL+R+ RLVKNG L++LE++SLP CESCLEGKMTKRPFT KG+RAKEPLEL+HS
Sbjct: 456 LRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHS 515
Query: 181 DLCGPMNVKARGGFKYLISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKARGGF+Y I+F DDYSRYGY+YLM+HKSEALEKFKEYK EVEN LSK IK
Sbjct: 516 DLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKT 575
Query: 241 LRSDRGGEYMNLRFQDYMIEHGIQS 266
RSDRGGEYM+L+FQ+Y++E GI S
Sbjct: 576 FRSDRGGEYMDLKFQNYLMECGIVS 600
BLAST of Cmc12g0326961 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 124.8 bits (312), Expect = 1.5e-27
Identity = 75/264 (28.41%), Postives = 131/264 (49.62%), Query Frame = 0
Query: 2 TLKVGTRDVISARAVGDAKLFFG-NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 61
T+K+G +GD + + L+++ VP ++ NL+S L Y F+
Sbjct: 321 TVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFAN 380
Query: 62 NEAFISKNGVHICSAKLEDNLYVLRPNEAKTVLNHEVFRTANTQNKRQIISPNNNTYLWH 121
+ ++K + I LY N E+ Q + + LWH
Sbjct: 381 QKWRLTKGSLVIAKGVARGTLY---------RTNAEI-----CQGELNAAQDEISVDLWH 440
Query: 122 LRLGHINLDRVRRLVKNGRLNKLEDDSLPPCESCLEGKMTKRPFTRKGYRAKEPLELIHS 181
R+GH++ ++ L K ++ + ++ PC+ CL GK + F R L+L++S
Sbjct: 441 KRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYS 500
Query: 182 DLCGPMNVKARGGFKYLISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 241
D+CGPM +++ GG KY ++FIDD SR ++Y+++ K + + F+++ VE +K+K
Sbjct: 501 DVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKR 560
Query: 242 LRSDRGGEYMNLRFQDYMIEHGIQ 265
LRSD GGEY + F++Y HGI+
Sbjct: 561 LRSDNGGEYTSREFEEYCSSHGIR 570
BLAST of Cmc12g0326961 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 99.4 bits (246), Expect = 6.6e-20
Identity = 71/243 (29.22%), Postives = 117/243 (48.15%), Query Frame = 0
Query: 30 LENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFISKNGVHIC-SAKLEDNLYVLRPNE 89
LE++ + NL+SV L E SI F + ISKNG+ + ++ + +N+
Sbjct: 345 LEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNNV------- 404
Query: 90 AKTVLNHEVFRTANTQNKRQIISPNNNTYLWHLRLGHIN------LDRVRRLVKNGRLNK 149
V+N + + + N ++K NN LWH R GHI+ + R LN
Sbjct: 405 --PVINFQAY-SINAKHK-------NNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNN 464
Query: 150 LEDDSLPPCESCLEGKMTKRPF--TRKGYRAKEPLELIHSDLCGPMNVKARGGFKYLISF 209
LE S CE CL GK + PF + K PL ++HSD+CGP+ Y + F
Sbjct: 465 LE-LSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIF 524
Query: 210 IDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMNLRFQDYMIE 264
+D ++ Y YL+++KS+ F+++ + E + K+ L D G EY++ + + ++
Sbjct: 525 VDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVK 569
BLAST of Cmc12g0326961 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 98.2 bits (243), Expect = 1.5e-19
Identity = 75/253 (29.64%), Postives = 119/253 (47.04%), Query Frame = 0
Query: 17 GDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIE-HMYSINFSMNEAFIS--KNGVHIC 76
G A L ++ + L + VP I +NL+SV L + S+ F + GV +
Sbjct: 353 GSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLL 412
Query: 77 SAKLEDNLYVLRPNEAKTVLNHEVFRTANTQNKRQIISPNNNT--YLWHLRLGHINLDRV 136
K +D LY + A++Q SP + WH RLGH +L +
Sbjct: 413 QGKTKDELY--------------EWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAIL 472
Query: 137 RRLVKNGRLNKLE-DDSLPPCESCLEGKMTKRPFTRKGYRAKEPLELIHSDLCGPMNVKA 196
++ N L L L C C K K PF+ + +PLE I+SD+ + +
Sbjct: 473 NSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILS 532
Query: 197 RGGFKYLISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYM 256
++Y + F+D ++RY +LY ++ KS+ + F +K+ VEN +I L SD GGE++
Sbjct: 533 IDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFV 588
Query: 257 NLRFQDYMIEHGI 264
LR DY+ +HGI
Sbjct: 593 VLR--DYLSQHGI 588
BLAST of Cmc12g0326961 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 3.6e-18
Identity = 70/256 (27.34%), Postives = 115/256 (44.92%), Query Frame = 0
Query: 17 GDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIE------HMYSINFSMNEAFISKNGV 76
G L ++ + L N+ VP I +NL+SV L + +F + + GV
Sbjct: 374 GSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDL---NTGV 433
Query: 77 HICSAKLEDNLYVLRPNEAKTVLNHEVFRTANTQNKRQIISPNNNT--YLWHLRLGHINL 136
+ K +D LY + A++Q SP++ WH RLGH
Sbjct: 434 PLLQGKTKDELY--------------EWPIASSQPVSLFASPSSKATHSSWHARLGHPAP 493
Query: 137 DRVRRLVKNGRLNKLE-DDSLPPCESCLEGKMTKRPFTRKGYRAKEPLELIHSDLCGPMN 196
+ ++ N L+ L C CL K K PF++ + PLE I+SD+
Sbjct: 494 SILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SP 553
Query: 197 VKARGGFKYLISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGG 256
+ + ++Y + F+D ++RY +LY ++ KS+ E F +K +EN +I SD GG
Sbjct: 554 ILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGG 609
Query: 257 EYMNLRFQDYMIEHGI 264
E++ L +Y +HGI
Sbjct: 614 EFVAL--WEYFSQHGI 609
BLAST of Cmc12g0326961 vs. ExPASy Swiss-Prot
Match:
Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)
HSP 1 Score: 76.3 bits (186), Expect = 6.0e-13
Identity = 68/268 (25.37%), Postives = 114/268 (42.54%), Query Frame = 0
Query: 11 ISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFISKNGV 70
I A+G+ F N P I +L+S+S L + F+ N +G
Sbjct: 490 IPINAIGNLHFNFQNGTKTSIKALHTPNIAYDLLSLSELANQNITACFTRN-TLERSDGT 549
Query: 71 HICSAKLEDNLYVLRPNEAKTVLNHEVFRTANTQNKRQIISPNNNTY-LWHLRLGHINLD 130
+ + Y L ++ + +H T N NK + S N Y L H LGH N
Sbjct: 550 VLAPIVKHGDFYWL--SKKYLIPSHISKLTINNVNKSK--SVNKYPYPLIHRMLGHANFR 609
Query: 131 RVRRLVKNGRLNKLEDDSLP-------PCESCLEGKMTKRPFTRKGYRAK-----EPLEL 190
+++ +K + L++ + C CL GK TK KG R K EP +
Sbjct: 610 SIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHV-KGSRLKYQESYEPFQY 669
Query: 191 IHSDLCGPMNVKARGGFKYLISFIDDYSRYGYLYLMEHKSE--ALEKFKEYKTEVENLLS 250
+H+D+ GP++ + Y ISF D+ +R+ ++Y + + E L F ++N +
Sbjct: 670 LHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFN 729
Query: 251 KKIKILRSDRGGEYMNLRFQDYMIEHGI 264
++ +++ DRG EY N + GI
Sbjct: 730 ARVLVIQMDRGSEYTNKTLHKFFTNRGI 751
BLAST of Cmc12g0326961 vs. ExPASy TrEMBL
Match:
A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)
HSP 1 Score: 506.5 bits (1303), Expect = 6.6e-140
Identity = 250/265 (94.34%), Postives = 256/265 (96.60%), Query Frame = 0
Query: 1 MTLKVGTRDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
MTLKVGT DVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM
Sbjct: 233 MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 292
Query: 61 NEAFISKNGVHICSAKLEDNLYVLRPNEAKTVLNHEVFRTANTQNKRQIISPNNNTYLWH 120
NEAFI KNGVHICSAKLE+NLYVLRPNEAK VLNHE+FRTANTQNKRQ ISPNNNTYLWH
Sbjct: 293 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 352
Query: 121 LRLGHINLDRVRRLVKNGRLNKLEDDSLPPCESCLEGKMTKRPFTRKGYRAKEPLELIHS 180
LRLGHINLDR+ RLVKNG LNKL+D SLPPCESCLEGKMTKRPFT KGYRAKEPLELIHS
Sbjct: 353 LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 412
Query: 181 DLCGPMNVKARGGFKYLISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKARGGF+Y ISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI
Sbjct: 413 DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 472
Query: 241 LRSDRGGEYMNLRFQDYMIEHGIQS 266
LRSDRGGEYM+LRFQDYMIEHGIQS
Sbjct: 473 LRSDRGGEYMDLRFQDYMIEHGIQS 497
BLAST of Cmc12g0326961 vs. ExPASy TrEMBL
Match:
A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)
HSP 1 Score: 497.7 bits (1280), Expect = 3.1e-137
Identity = 246/265 (92.83%), Postives = 253/265 (95.47%), Query Frame = 0
Query: 1 MTLKVGTRDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
MTLKVGT DVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM
Sbjct: 233 MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 292
Query: 61 NEAFISKNGVHICSAKLEDNLYVLRPNEAKTVLNHEVFRTANTQNKRQIISPNNNTYLWH 120
NEAFI KNGVHICSAKLE+NLYVLRPNEAK VLNHE+FRTANTQNKRQ ISPNNNTYLWH
Sbjct: 293 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 352
Query: 121 LRLGHINLDRVRRLVKNGRLNKLEDDSLPPCESCLEGKMTKRPFTRKGYRAKEPLELIHS 180
LRLGHINLDR+ RLVK+G LNKL+D SLPPCESCLEGKMTKRPFT KGYRAKEPLELIHS
Sbjct: 353 LRLGHINLDRIGRLVKDGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 412
Query: 181 DLCGPMNVKARGGFKYLISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKARG F+Y ISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI
Sbjct: 413 DLCGPMNVKARGSFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 472
Query: 241 LRSDRGGEYMNLRFQDYMIEHGIQS 266
RSDRGGEYM+L FQDYMIEHGIQS
Sbjct: 473 FRSDRGGEYMDLIFQDYMIEHGIQS 497
BLAST of Cmc12g0326961 vs. ExPASy TrEMBL
Match:
A0A5D3BNE1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00410 PE=4 SV=1)
HSP 1 Score: 497.3 bits (1279), Expect = 4.0e-137
Identity = 245/265 (92.45%), Postives = 252/265 (95.09%), Query Frame = 0
Query: 1 MTLKVGTRDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
M LKVGT DVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSI+FSM
Sbjct: 205 MILKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSISFSM 264
Query: 61 NEAFISKNGVHICSAKLEDNLYVLRPNEAKTVLNHEVFRTANTQNKRQIISPNNNTYLWH 120
NEAFISKNGVHICS KLEDNLYVL+PNE K VLNHE+FRTANTQNKRQ IS NNNTYLWH
Sbjct: 265 NEAFISKNGVHICSVKLEDNLYVLKPNEGKAVLNHEMFRTANTQNKRQRISSNNNTYLWH 324
Query: 121 LRLGHINLDRVRRLVKNGRLNKLEDDSLPPCESCLEGKMTKRPFTRKGYRAKEPLELIHS 180
LRLGHINLDR+ RLVKNG LNKLEDDSLPPCESCLEGKMTKRPFT KGYRAKEPLELIHS
Sbjct: 325 LRLGHINLDRIGRLVKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 384
Query: 181 DLCGPMNVKARGGFKYLISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKA GGF+Y ISFIDDYS YGYLYL+EHKSEALEKFKEYKTEVENLLSKKIKI
Sbjct: 385 DLCGPMNVKAIGGFEYFISFIDDYSMYGYLYLIEHKSEALEKFKEYKTEVENLLSKKIKI 444
Query: 241 LRSDRGGEYMNLRFQDYMIEHGIQS 266
LRSDRGGEYM+LRFQDYMIEHGIQS
Sbjct: 445 LRSDRGGEYMDLRFQDYMIEHGIQS 469
BLAST of Cmc12g0326961 vs. ExPASy TrEMBL
Match:
A0A5A7VJG3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001110 PE=4 SV=1)
HSP 1 Score: 479.6 bits (1233), Expect = 8.7e-132
Identity = 241/265 (90.94%), Postives = 246/265 (92.83%), Query Frame = 0
Query: 1 MTLKVGTRDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
MTL VGT DVISARAVGD KLFFG KFMFLENLYIVPKIKRNLV VSCLIEHMYSINFSM
Sbjct: 208 MTLMVGTGDVISARAVGDVKLFFGIKFMFLENLYIVPKIKRNLVFVSCLIEHMYSINFSM 267
Query: 61 NEAFISKNGVHICSAKLEDNLYVLRPNEAKTVLNHEVFRTANTQNKRQIISPNNNTYLWH 120
NEAFISKNG AKLEDNLYVLRPNEAK VLNHE+FRTANTQNKRQ ISPNNNTYLWH
Sbjct: 268 NEAFISKNG-----AKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 327
Query: 121 LRLGHINLDRVRRLVKNGRLNKLEDDSLPPCESCLEGKMTKRPFTRKGYRAKEPLELIHS 180
LRL HINLDR+ RLVKNG LNKL+DDSLPPCESCLEGKMTKRPFT K YRAKEPLELIHS
Sbjct: 328 LRLDHINLDRIGRLVKNGLLNKLKDDSLPPCESCLEGKMTKRPFTGKDYRAKEPLELIHS 387
Query: 181 DLCGPMNVKARGGFKYLISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKARGGF+Y ISFIDDYSRYGYLYLMEHK EALEKFKEYKTEVENLLSKKIKI
Sbjct: 388 DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKYEALEKFKEYKTEVENLLSKKIKI 447
Query: 241 LRSDRGGEYMNLRFQDYMIEHGIQS 266
LRSDRGGEYM+LRFQDYMIEHGIQS
Sbjct: 448 LRSDRGGEYMDLRFQDYMIEHGIQS 467
BLAST of Cmc12g0326961 vs. ExPASy TrEMBL
Match:
A0A5A7TYF5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G001600 PE=4 SV=1)
HSP 1 Score: 385.2 bits (988), Expect = 2.2e-103
Identity = 186/265 (70.19%), Postives = 222/265 (83.77%), Query Frame = 0
Query: 1 MTLKVGTRDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
MT++VGT VISA AVG +L F+ LEN+Y+VP +KRNL+SV CL+E YS+ F++
Sbjct: 336 MTMRVGTGHVISAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNV 395
Query: 61 NEAFISKNGVHICSAKLEDNLYVLRPNEAKTVLNHEVFRTANTQNKRQIISPNNNTYLWH 120
N+ FI KNGV ICSAKLE+NLYVLR +K +LN E+F+TA TQNKR ISP N +LWH
Sbjct: 396 NKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWH 455
Query: 121 LRLGHINLDRVRRLVKNGRLNKLEDDSLPPCESCLEGKMTKRPFTRKGYRAKEPLELIHS 180
LRLGHINL+R+ RLVKNG L++LE++SLP CESCLEGKMTKRPFT KG+RAKEPLEL+HS
Sbjct: 456 LRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHS 515
Query: 181 DLCGPMNVKARGGFKYLISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKARGGF+Y I+F DDYSRYGY+YLM+HKSEALEKFKEYK EVEN LSK IK
Sbjct: 516 DLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKT 575
Query: 241 LRSDRGGEYMNLRFQDYMIEHGIQS 266
RSDRGGEYM+L+FQ+Y++E GI S
Sbjct: 576 FRSDRGGEYMDLKFQNYLMECGIVS 600
BLAST of Cmc12g0326961 vs. TAIR 10
Match:
ATMG00300.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 58.5 bits (140), Expect = 9.2e-09
Identity = 29/75 (38.67%), Postives = 42/75 (56.00%), Query Frame = 0
Query: 114 NNTYLWHLRLGHINLDRVRRLVKNGRLNKLEDDSLPPCESCLEGKMTKRPFTRKGYRAKE 173
+ T LWH RL H++ + LVK G L+ + SL CE C+ GK + F+ + K
Sbjct: 67 DETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKN 126
Query: 174 PLELIHSDLCGPMNV 189
PL+ +HSDL G +V
Sbjct: 127 PLDYVHSDLWGAPSV 141
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0025945.1 | 1.4e-139 | 94.34 | gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi... | [more] |
KAA0035907.1 | 6.4e-137 | 92.83 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
KAA0060534.1 | 8.3e-137 | 92.45 | gag/pol protein [Cucumis melo var. makuwa] >TYK00774.1 gag/pol protein [Cucumis ... | [more] |
KAA0067938.1 | 1.8e-131 | 90.94 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
KAA0046415.1 | 4.6e-103 | 70.19 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 1.5e-27 | 28.41 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 6.6e-20 | 29.22 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q9ZT94 | 1.5e-19 | 29.64 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 3.6e-18 | 27.34 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q12491 | 6.0e-13 | 25.37 | Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7TZD0 | 6.6e-140 | 94.34 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000... | [more] |
A0A5A7T2V9 | 3.1e-137 | 92.83 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760... | [more] |
A0A5D3BNE1 | 4.0e-137 | 92.45 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G0041... | [more] |
A0A5A7VJG3 | 8.7e-132 | 90.94 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G0011... | [more] |
A0A5A7TYF5 | 2.2e-103 | 70.19 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G0016... | [more] |
Match Name | E-value | Identity | Description | |
ATMG00300.1 | 9.2e-09 | 38.67 | Gag-Pol-related retrotransposon family protein | [more] |