Homology
BLAST of Cmc12g0326291 vs. NCBI nr
Match:
TYK06518.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 1031.2 bits (2665), Expect = 3.2e-297
Identity = 508/529 (96.03%), Postives = 512/529 (96.79%), Query Frame = 0
Query: 1 MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIASETPVSETVDTPNLSCEL 60
MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEI SE PVSETVDTPNLSCEL
Sbjct: 731 MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSETVDTPNLSCEL 790
Query: 61 ELRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDLKTNQEALNSVDSNMWK 120
E RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNL+LIDED KT QEALNSVDS MWK
Sbjct: 791 EPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWK 850
Query: 121 EAIKSELDSLVMYHTWELVDLPMGNKPIRCKWIFKRKTKPNGSIERYKSRLVVVGYTRKQ 180
EAIKSELDSL M HTWELVDLPMGNKPIRCKWIFKRKTKPNG IERYK+RLVVVGYT+KQ
Sbjct: 851 EAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQ 910
Query: 181 GVDYFDTYSPVTKITTIRALITLATIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKIS 240
GVDYFDTYSPVTKITTIRALI LA IHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKIS
Sbjct: 911 GVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKIS 970
Query: 241 GQENKVCKLRKSLYGLKQASKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLY 300
GQENKVCKLRKSLYGLKQA KQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLY
Sbjct: 971 GQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLY 1030
Query: 301 VDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLFLCQSHYVEKIL 360
VDDMLIFGTNMELITDTK+FLSSHFEMKDLGEADVILGVKIRKNKTSL LCQSHYVEKIL
Sbjct: 1031 VDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKIL 1090
Query: 361 KKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLS 420
KKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLS
Sbjct: 1091 KKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLS 1150
Query: 421 RYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYV 480
RYTHNPNRYHWDALRHLLRYLKGTIDYCLHF KFPAVLEGYCDANWVTDNDEVNSTSGYV
Sbjct: 1151 RYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDNDEVNSTSGYV 1210
Query: 481 FLLRGGAISWKSTKQTCIARSTMEFEFIALELAGQEAEWIKNLLEDVPL 530
FLL GGAISWKSTKQTCIARSTME EFIALELAGQEAEWIKNLL DVPL
Sbjct: 1211 FLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPL 1259
BLAST of Cmc12g0326291 vs. NCBI nr
Match:
KAD6453934.1 (hypothetical protein E3N88_08640 [Mikania micrantha])
HSP 1 Score: 707.2 bits (1824), Expect = 1.1e-199
Identity = 346/530 (65.28%), Postives = 429/530 (80.94%), Query Frame = 0
Query: 1 MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIASETPVSETVDTPNLSCEL 60
M L+D++I ES +AEFFE FPLK+ L M ++ P S + + +
Sbjct: 90 MLLSDRSIIESCNAEFFEDEFPLKK------LKGIMSSVNVSQVDPSSSIKEIEH----V 149
Query: 61 ELRRSKRQRTEKSFGPDFLSTFIVE--RRDEIDCNFTNLYLIDEDLKTNQEALNSVDSNM 120
E RRSKR RTE SFGPDFL++F+ E D + +F +++L++ D KT QEA+ SVD+N+
Sbjct: 150 EPRRSKRCRTETSFGPDFLTSFLTENFHVDMLSEDFVSIFLLENDPKTYQEAITSVDANL 209
Query: 121 WKEAIKSELDSLVMYHTWELVDLPMGNKPIRCKWIFKRKTKPNGSIERYKSRLVVVGYTR 180
WKEAIKSE+DS++ HTWEL DLP GNKPI KWIFK+K +P+G++++YK+RLV+ G+T+
Sbjct: 210 WKEAIKSEVDSILSNHTWELTDLPKGNKPIGSKWIFKKKLRPDGTVDKYKARLVIRGFTQ 269
Query: 181 KQGVDYFDTYSPVTKITTIRALITLATIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFK 240
K G+DYFDTYSPVTKITTIR+LI++A I+ LLIHQMDVKTAFLNG+L+EEIYM QPEGF
Sbjct: 270 KHGLDYFDTYSPVTKITTIRSLISIAAINGLLIHQMDVKTAFLNGDLDEEIYMLQPEGFV 329
Query: 241 ISGQENKVCKLRKSLYGLKQASKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILIC 300
+SG E+KVCKLRKSLYGLKQA K+WYEKF+ TL +G+ +N+SD+CVYSK +LIC
Sbjct: 330 VSGLESKVCKLRKSLYGLKQAPKKWYEKFDRTLKQDGYIVNNSDSCVYSKRSKTGYVLIC 389
Query: 301 LYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLFLCQSHYVEK 360
LYVDDMLIFG +M I TK FLSS FEMKDLGEADVILGVKI++ + LCQSHY+E+
Sbjct: 390 LYVDDMLIFGADMHDINQTKAFLSSKFEMKDLGEADVILGVKIKRTWNGISLCQSHYIEQ 449
Query: 361 ILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSR 420
+LKKFD F+++PV+TP+D S LKKN +SVSQ EYAKIIGSVM+LMNYTRPDIAY VSR
Sbjct: 450 MLKKFDCFELNPVKTPYDPSILLKKNNHESVSQSEYAKIIGSVMFLMNYTRPDIAYTVSR 509
Query: 421 LSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSG 480
LSRYTHNP++ HW A+ L+RYL+GT++ CLH+NKFPAVLEGYCDANWVTDNDEV+STSG
Sbjct: 510 LSRYTHNPSKEHWSAIHRLMRYLRGTMELCLHYNKFPAVLEGYCDANWVTDNDEVSSTSG 569
Query: 481 YVFLLRGGAISWKSTKQTCIARSTMEFEFIALELAGQEAEWIKNLLEDVP 529
YVF++ GGAISWKS+KQTCIARSTME EFIALELAGQEAEW++ LL D+P
Sbjct: 570 YVFIMGGGAISWKSSKQTCIARSTMESEFIALELAGQEAEWLRGLLSDIP 609
BLAST of Cmc12g0326291 vs. NCBI nr
Match:
KAG7571733.1 (Integrase catalytic core [Arabidopsis suecica])
HSP 1 Score: 657.5 bits (1695), Expect = 9.6e-185
Identity = 329/520 (63.27%), Postives = 400/520 (76.92%), Query Frame = 0
Query: 10 ESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIASETPVSETVDTPNLSCELELRRSKRQR 69
ESRD EFFE+VFP K++L S S+ + + AS + D E RRSKR R
Sbjct: 688 ESRDVEFFENVFPFKRNLDFAS-SHDSANIDFASSSNAKRIHDDAE-----EPRRSKRMR 747
Query: 70 TEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDLKTNQEALNSVDSNMWKEAIKSELDS 129
TE FGPDF++TF+ E DEI F +LI+ED KT EA+ SVD+ WKEA+ +E DS
Sbjct: 748 TETDFGPDFITTFLAE-YDEISEEFVFAFLIEEDPKTFSEAMKSVDAVFWKEAVNNEFDS 807
Query: 130 LVMYHTWELVDLPMGNKPIRCKWIFKRKTKPNGSIERYKSRLVVVGYTRKQGVDYFDTYS 189
++ HTWE+VDLP G K IRCKWI K+K K +GSI+++K+RLV G+ +KQGVDYFDTY+
Sbjct: 808 IMTNHTWEIVDLPRGCKAIRCKWILKKKFKADGSIDKFKARLVAQGFAQKQGVDYFDTYA 867
Query: 190 PVTKITTIRALITLATIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKISGQENKVCKL 249
PVTKI +IR L+ +A+ H L++HQMDVKTAFLNG+L EEIYM QPEGF I GQENKVCKL
Sbjct: 868 PVTKIASIRMLLAVASAHKLVVHQMDVKTAFLNGDLHEEIYMMQPEGFIIEGQENKVCKL 927
Query: 250 RKSLYGLKQASKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGT 309
KSLYGLKQA KQW+EKF+NTL+ NGF N DTCV+SK+ ++ICLYVDDMLI GT
Sbjct: 928 IKSLYGLKQAPKQWFEKFSNTLLENGFVSNEGDTCVFSKVHEHGYVIICLYVDDMLILGT 987
Query: 310 NMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLFLCQSHYVEKILKKFDSFDVS 369
++E++ DTK FLSS F+MKDLGEADVILG+K+ K + L QSHY+EKILKKF +D
Sbjct: 988 SLEIVCDTKVFLSSKFDMKDLGEADVILGIKVVKTDSGFSLNQSHYIEKILKKFGYWDEP 1047
Query: 370 PVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRY 429
++P+D+S HL +N+G+SV+Q EYAK+IGSVMYLMN TRPDIAYAVSRLSRYTHNP
Sbjct: 1048 SAKSPYDSSLHLCQNRGESVNQSEYAKVIGSVMYLMNCTRPDIAYAVSRLSRYTHNPGSN 1107
Query: 430 HWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLRGGAIS 489
HW AL L+RYLKGTID+ L ++ VLE YCDANW +DNDEVNSTSG+VF L GGAI+
Sbjct: 1108 HWSALNRLMRYLKGTIDWNLCYSGTSCVLEAYCDANWSSDNDEVNSTSGFVFTLAGGAIA 1167
Query: 490 WKSTKQTCIARSTMEFEFIALELAGQEAEWIKNLLEDVPL 530
WKSTKQTCIARSTME E IALELAGQEAEW++NLL D P+
Sbjct: 1168 WKSTKQTCIARSTMESELIALELAGQEAEWLRNLLADFPM 1200
BLAST of Cmc12g0326291 vs. NCBI nr
Match:
KAG7551885.1 (Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa])
HSP 1 Score: 656.0 bits (1691), Expect = 2.8e-184
Identity = 328/520 (63.08%), Postives = 399/520 (76.73%), Query Frame = 0
Query: 10 ESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIASETPVSETVDTPNLSCELELRRSKRQR 69
ESRD EFFE+VFP K++L S S+ + + AS + D E RRSKR R
Sbjct: 719 ESRDVEFFENVFPFKRNLDFDS-SHDSANIDFASSSNAKRIHDDAE-----EPRRSKRMR 778
Query: 70 TEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDLKTNQEALNSVDSNMWKEAIKSELDS 129
TE FGPDF++TF+ E DEI F +LI+ED KT EA+ SVD+ WKEA+ +E DS
Sbjct: 779 TETDFGPDFITTFLAE-YDEISEEFVFAFLIEEDPKTFSEAMKSVDAVFWKEAVNNEFDS 838
Query: 130 LVMYHTWELVDLPMGNKPIRCKWIFKRKTKPNGSIERYKSRLVVVGYTRKQGVDYFDTYS 189
++ HTWE+VDLP G K IRCKWI K+K K +GSI+++K+RLV G+ +KQGVDYFDTY+
Sbjct: 839 IMTNHTWEIVDLPRGCKAIRCKWILKKKFKADGSIDKFKARLVAQGFAQKQGVDYFDTYA 898
Query: 190 PVTKITTIRALITLATIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKISGQENKVCKL 249
PVTKI +IR L+ +A+ H L++HQMDVKTAFLNG+L EEIYM QPEGF I GQENKVCKL
Sbjct: 899 PVTKIASIRMLLAVASAHKLVVHQMDVKTAFLNGDLHEEIYMMQPEGFIIEGQENKVCKL 958
Query: 250 RKSLYGLKQASKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGT 309
KSLYGLKQA KQW+EKF+NTL+ NGF N DTCV+SK+ ++ICLYVDDMLI GT
Sbjct: 959 IKSLYGLKQAPKQWFEKFSNTLLENGFVSNEGDTCVFSKVHEHGYVIICLYVDDMLILGT 1018
Query: 310 NMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLFLCQSHYVEKILKKFDSFDVS 369
++E++ DTK FLSS F+MKDLGEADVILG+K+ K + L QSHY+EKILKKF +D
Sbjct: 1019 SLEIVCDTKVFLSSKFDMKDLGEADVILGIKVVKTDSGFSLNQSHYIEKILKKFGYWDEP 1078
Query: 370 PVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRY 429
++P+D+S HL +N+G+SV+Q EYAK+IGSVMYLMN TRPDIAY VSRLSRYTHNP
Sbjct: 1079 SAKSPYDSSLHLCQNRGESVNQSEYAKVIGSVMYLMNCTRPDIAYVVSRLSRYTHNPGSN 1138
Query: 430 HWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLRGGAIS 489
HW AL L+RYLKGTID+ L ++ VLE YCDANW +DNDEVNSTSG+VF L GGAI+
Sbjct: 1139 HWSALNRLMRYLKGTIDWNLCYSGTSCVLEAYCDANWSSDNDEVNSTSGFVFTLAGGAIA 1198
Query: 490 WKSTKQTCIARSTMEFEFIALELAGQEAEWIKNLLEDVPL 530
WKSTKQTCIARSTME E IALELAGQEAEW++NLL D P+
Sbjct: 1199 WKSTKQTCIARSTMESELIALELAGQEAEWLRNLLADFPM 1231
BLAST of Cmc12g0326291 vs. NCBI nr
Match:
KAG7592238.1 (Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa])
HSP 1 Score: 656.0 bits (1691), Expect = 2.8e-184
Identity = 328/520 (63.08%), Postives = 399/520 (76.73%), Query Frame = 0
Query: 10 ESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIASETPVSETVDTPNLSCELELRRSKRQR 69
ESRD EFFE+VFP K++L S S+ + + AS + D E RRSKR R
Sbjct: 719 ESRDVEFFENVFPFKRNLDFDS-SHDSANIDFASSSNAKRIHDDAE-----EPRRSKRMR 778
Query: 70 TEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDLKTNQEALNSVDSNMWKEAIKSELDS 129
TE FGPDF++TF+ E DEI F +LI+ED KT EA+ SVD+ WKEA+ +E DS
Sbjct: 779 TETDFGPDFITTFLAE-YDEISEEFVFAFLIEEDPKTFSEAMKSVDAVFWKEAVNNEFDS 838
Query: 130 LVMYHTWELVDLPMGNKPIRCKWIFKRKTKPNGSIERYKSRLVVVGYTRKQGVDYFDTYS 189
++ HTWE+VDLP G K IRCKWI K+K K +GSI+++K+RLV G+ +KQGVDYFDTY+
Sbjct: 839 IMTNHTWEIVDLPRGCKAIRCKWILKKKFKADGSIDKFKARLVAQGFAQKQGVDYFDTYA 898
Query: 190 PVTKITTIRALITLATIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKISGQENKVCKL 249
PVTKI +IR L+ +A+ H L++HQMDVKTAFLNG+L EEIYM QPEGF I GQENKVCKL
Sbjct: 899 PVTKIASIRMLLAVASAHKLVVHQMDVKTAFLNGDLHEEIYMMQPEGFIIEGQENKVCKL 958
Query: 250 RKSLYGLKQASKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGT 309
KSLYGLKQA KQW+EKF+NTL+ NGF N DTCV+SK+ ++ICLYVDDMLI GT
Sbjct: 959 IKSLYGLKQAPKQWFEKFSNTLLENGFVSNEGDTCVFSKVHEHGYVIICLYVDDMLILGT 1018
Query: 310 NMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLFLCQSHYVEKILKKFDSFDVS 369
++E++ DTK FLSS F+MKDLGEADVILG+K+ K + L QSHY+EKILKKF +D
Sbjct: 1019 SLEIVCDTKVFLSSKFDMKDLGEADVILGIKVVKTDSGFSLNQSHYIEKILKKFGYWDEP 1078
Query: 370 PVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRY 429
++P+D+S HL +N+G+SV+Q EYAK+IGSVMYLMN TRPDIAY VSRLSRYTHNP
Sbjct: 1079 SAKSPYDSSLHLCQNRGESVNQSEYAKVIGSVMYLMNCTRPDIAYVVSRLSRYTHNPGSN 1138
Query: 430 HWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYVFLLRGGAIS 489
HW AL L+RYLKGTID+ L ++ VLE YCDANW +DNDEVNSTSG+VF L GGAI+
Sbjct: 1139 HWSALNRLMRYLKGTIDWNLCYSGTSCVLEAYCDANWSSDNDEVNSTSGFVFTLAGGAIA 1198
Query: 490 WKSTKQTCIARSTMEFEFIALELAGQEAEWIKNLLEDVPL 530
WKSTKQTCIARSTME E IALELAGQEAEW++NLL D P+
Sbjct: 1199 WKSTKQTCIARSTMESELIALELAGQEAEWLRNLLADFPM 1231
BLAST of Cmc12g0326291 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 379.4 bits (973), Expect = 6.6e-104
Identity = 208/479 (43.42%), Postives = 300/479 (62.63%), Query Frame = 0
Query: 62 LRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDLKTNQEALNSVDSNMWKE 121
LRRS+R R E P I + R+ E LK E L+ + N +
Sbjct: 784 LRRSERPRVESRRYPSTEYVLISDDRE------------PESLK---EVLSHPEKNQLMK 843
Query: 122 AIKSELDSLVMYHTWELVDLPMGNKPIRCKWIFKRKTKPNGSIERYKSRLVVVGYTRKQG 181
A++ E++SL T++LV+LP G +P++CKW+FK K + + RYK+RLVV G+ +K+G
Sbjct: 844 AMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKG 903
Query: 182 VDYFDTYSPVTKITTIRALITLATIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKISG 241
+D+ + +SPV K+T+IR +++LA +L + Q+DVKTAFL+G+LEEEIYM QPEGF+++G
Sbjct: 904 IDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAG 963
Query: 242 QENKVCKLRKSLYGLKQASKQWYEKFNNTLITNGFKINSSDTCVYSKMVGA-DCILICLY 301
+++ VCKL KSLYGLKQA +QWY KF++ + + + SD CVY K + I++ LY
Sbjct: 964 KKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLY 1023
Query: 302 VDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTS--LFLCQSHYVEK 361
VDDMLI G + LI K LS F+MKDLG A ILG+KI + +TS L+L Q Y+E+
Sbjct: 1024 VDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIER 1083
Query: 362 ILKKFDSFDVSPVRTPFDASKHLKK--------NKGDSVSQPEYAKIIGSVMYLMNYTRP 421
+L++F+ + PV TP L K KG+ P Y+ +GS+MY M TRP
Sbjct: 1084 VLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVP-YSSAVGSLMYAMVCTRP 1143
Query: 422 DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDN 481
DIA+AV +SR+ NP + HW+A++ +LRYL+GT CL F +L+GY DA+ D
Sbjct: 1144 DIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDI 1203
Query: 482 DEVNSTSGYVFLLRGGAISWKSTKQTCIARSTMEFEFIALELAGQEAEWIKNLLEDVPL 530
D S++GY+F GGAISW+S Q C+A ST E E+IA G+E W+K L+++ L
Sbjct: 1204 DNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGL 1246
BLAST of Cmc12g0326291 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 312.4 bits (799), Expect = 9.9e-84
Identity = 167/421 (39.67%), Postives = 250/421 (59.38%), Query Frame = 0
Query: 110 ALNSVDSNMWKEAIKSELDSLVMYHTWELVDLPMGNKPI-RCKWIFKRKTKPNGSIERYK 169
A+ ++ W+ A+ SE+++ + HTW+LV P + I C+WIF +K +GS+ RYK
Sbjct: 959 AIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYK 1018
Query: 170 SRLVVVGYTRKQGVDYFDTYSPVTKITTIRALITLATIHNLLIHQMDVKTAFLNGNLEEE 229
+RLV GY ++ G+DY +T+SPV K T+IR ++ +A + I Q+DV AFL G L ++
Sbjct: 1019 ARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDD 1078
Query: 230 IYMTQPEGFKISGQENKVCKLRKSLYGLKQASKQWYEKFNNTLITNGFKINSSDTCVYSK 289
+YM+QP GF + N VCKLRK+LYGLKQA + WY + N L+T GF + SDT ++
Sbjct: 1079 VYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVL 1138
Query: 290 MVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSL 349
G + + +YVDD+LI G + L+ +T LS F +KD E LG++ ++ T L
Sbjct: 1139 QRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGL 1198
Query: 350 FLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQP-EYAKIIGSVMYLMNY 409
L Q Y+ +L + + PV TP S L G ++ P EY I+GS+ YL +
Sbjct: 1199 HLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLA-F 1258
Query: 410 TRPDIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANW 469
TRPDI+YAV+RLS++ H P H AL+ +LRYL GT ++ + K + L Y DA+W
Sbjct: 1259 TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADW 1318
Query: 470 VTDNDEVNSTSGYVFLLRGGAISWKSTKQTCIARSTMEFEFIALELAGQEAEWIKNLLED 528
D D+ ST+GY+ L ISW S KQ + RS+ E E+ ++ E +WI +LL +
Sbjct: 1319 AGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTE 1378
BLAST of Cmc12g0326291 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 308.5 bits (789), Expect = 1.4e-82
Identity = 168/436 (38.53%), Postives = 254/436 (58.26%), Query Frame = 0
Query: 98 YLIDEDLKTNQE---ALNSVDSNMWKEAIKSELDSLVMYHTWELVDLPMGNKPI-RCKWI 157
Y L N E A+ ++ + W++A+ SE+++ + HTW+LV P + I C+WI
Sbjct: 927 YSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWI 986
Query: 158 FKRKTKPNGSIERYKSRLVVVGYTRKQGVDYFDTYSPVTKITTIRALITLATIHNLLIHQ 217
F +K +GS+ RYK+RLV GY ++ G+DY +T+SPV K T+IR ++ +A + I Q
Sbjct: 987 FTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQ 1046
Query: 218 MDVKTAFLNGNLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQASKQWYEKFNNTLIT 277
+DV AFL G L +E+YM+QP GF + + VC+LRK++YGLKQA + WY + L+T
Sbjct: 1047 LDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLT 1106
Query: 278 NGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEA 337
GF + SDT ++ G I + +YVDD+LI G + L+ T LS F +K+ +
Sbjct: 1107 VGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDL 1166
Query: 338 DVILGVKIRKNKTSLFLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQP- 397
LG++ ++ L L Q Y +L + + PV TP S L + G + P
Sbjct: 1167 HYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPT 1226
Query: 398 EYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFN 457
EY I+GS+ YL +TRPD++YAV+RLS+Y H P HW+AL+ +LRYL GT D+ +
Sbjct: 1227 EYRGIVGSLQYLA-FTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLK 1286
Query: 458 KFPAV-LEGYCDANWVTDNDEVNSTSGYVFLLRGGAISWKSTKQTCIARSTMEFEFIALE 517
K + L Y DA+W D D+ ST+GY+ L ISW S KQ + RS+ E E+ ++
Sbjct: 1287 KGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVA 1346
Query: 518 LAGQEAEWIKNLLEDV 528
E +WI +LL ++
Sbjct: 1347 NTSSELQWICSLLTEL 1361
BLAST of Cmc12g0326291 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 295.0 bits (754), Expect = 1.6e-78
Identity = 187/531 (35.22%), Postives = 287/531 (54.05%), Query Frame = 0
Query: 4 NDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIASETPVSETVDTPNLSCELELR 63
N +NES+ + +H+ K S P+ S E E + T N E+ R
Sbjct: 800 NKYFLNESKKRKRDDHLNESKGS-GNPNESRESETAEHLKEIGIDN--PTKNDGIEIINR 859
Query: 64 RSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDLKTN-QEALNSVDSNMWKEA 123
RS+R +T+ + E + ++ N + I D+ + E D + W+EA
Sbjct: 860 RSERLKTKPQISYN-------EEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEA 919
Query: 124 IKSELDSLVMYHTWELVDLPMGNKPIRCKWIFKRKTKPNGSIERYKSRLVVVGYTRKQGV 183
I +EL++ + +TW + P + +W+F K G+ RYK+RLV G+T+K +
Sbjct: 920 INTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQI 979
Query: 184 DYFDTYSPVTKITTIRALITLATIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKISGQ 243
DY +T++PV +I++ R +++L +NL +HQMDVKTAFLNG L+EEIYM P+G IS
Sbjct: 980 DYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCN 1039
Query: 244 ENKVCKLRKSLYGLKQASKQWYEKFNNTLITNGFKINSSDTCVYSKMVG--ADCILICLY 303
+ VCKL K++YGLKQA++ W+E F L F +S D C+Y G + I + LY
Sbjct: 1040 SDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLY 1099
Query: 304 VDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLFLCQSHYVEKIL 363
VDD++I +M + + K +L F M DL E +G++I + ++L QS YV+KIL
Sbjct: 1100 VDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKIL 1159
Query: 364 KKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLS 423
KF+ + + V TP + + + D +IG +MY+M TRPD+ AV+ LS
Sbjct: 1160 SKFNMENCNAVSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILS 1219
Query: 424 RYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNK---FPAVLEGYCDANWVTDNDEVNSTS 483
RY+ N W L+ +LRYLKGTID L F K F + GY D++W + ST+
Sbjct: 1220 RYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTT 1279
Query: 484 GYVF-LLRGGAISWKSTKQTCIARSTMEFEFIALELAGQEAEWIKNLLEDV 528
GY+F + I W + +Q +A S+ E E++AL A +EA W+K LL +
Sbjct: 1280 GYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSI 1318
BLAST of Cmc12g0326291 vs. ExPASy Swiss-Prot
Match:
P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)
HSP 1 Score: 161.0 bits (406), Expect = 3.7e-38
Identity = 99/284 (34.86%), Postives = 143/284 (50.35%), Query Frame = 0
Query: 214 MDVKTAFLNGNLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQASKQWYEKFNNTLIT 273
MDV TAFLN ++E IY+ QP GF + V +L +YGLKQA W E NNTL
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 274 NGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEA 333
GF + + +Y + I I +YVDD+L+ + ++ K L+ + MKDLG+
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120
Query: 334 DVILGVKIRKNKT-SLFLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQ- 393
D LG+ I ++ + L Y+ K + + +TP SK L + +
Sbjct: 121 DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180
Query: 394 PEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHF 453
Y I+G +++ N RPDI+Y VS LSR+ P H ++ R +LRYL T CL +
Sbjct: 181 TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240
Query: 454 NK-FPAVLEGYCDANWVTDNDEVNSTSGYVFLLRGGAISWKSTK 495
L YCDA+ +D +ST GYV LL G ++W S K
Sbjct: 241 RSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKK 284
BLAST of Cmc12g0326291 vs. ExPASy TrEMBL
Match:
A0A5D3C5T2 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00500 PE=4 SV=1)
HSP 1 Score: 1031.2 bits (2665), Expect = 1.5e-297
Identity = 508/529 (96.03%), Postives = 512/529 (96.79%), Query Frame = 0
Query: 1 MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIASETPVSETVDTPNLSCEL 60
MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEI SE PVSETVDTPNLSCEL
Sbjct: 731 MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSETVDTPNLSCEL 790
Query: 61 ELRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDLKTNQEALNSVDSNMWK 120
E RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNL+LIDED KT QEALNSVDS MWK
Sbjct: 791 EPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWK 850
Query: 121 EAIKSELDSLVMYHTWELVDLPMGNKPIRCKWIFKRKTKPNGSIERYKSRLVVVGYTRKQ 180
EAIKSELDSL M HTWELVDLPMGNKPIRCKWIFKRKTKPNG IERYK+RLVVVGYT+KQ
Sbjct: 851 EAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQ 910
Query: 181 GVDYFDTYSPVTKITTIRALITLATIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKIS 240
GVDYFDTYSPVTKITTIRALI LA IHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKIS
Sbjct: 911 GVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKIS 970
Query: 241 GQENKVCKLRKSLYGLKQASKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLY 300
GQENKVCKLRKSLYGLKQA KQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLY
Sbjct: 971 GQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLY 1030
Query: 301 VDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLFLCQSHYVEKIL 360
VDDMLIFGTNMELITDTK+FLSSHFEMKDLGEADVILGVKIRKNKTSL LCQSHYVEKIL
Sbjct: 1031 VDDMLIFGTNMELITDTKYFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKIL 1090
Query: 361 KKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLS 420
KKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLS
Sbjct: 1091 KKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLS 1150
Query: 421 RYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYV 480
RYTHNPNRYHWDALRHLLRYLKGTIDYCLHF KFPAVLEGYCDANWVTDNDEVNSTSGYV
Sbjct: 1151 RYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKKFPAVLEGYCDANWVTDNDEVNSTSGYV 1210
Query: 481 FLLRGGAISWKSTKQTCIARSTMEFEFIALELAGQEAEWIKNLLEDVPL 530
FLL GGAISWKSTKQTCIARSTME EFIALELAGQEAEWIKNLL DVPL
Sbjct: 1211 FLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEWIKNLLGDVPL 1259
BLAST of Cmc12g0326291 vs. ExPASy TrEMBL
Match:
A0A5N6PGV2 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_08640 PE=4 SV=1)
HSP 1 Score: 707.2 bits (1824), Expect = 5.1e-200
Identity = 346/530 (65.28%), Postives = 429/530 (80.94%), Query Frame = 0
Query: 1 MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIASETPVSETVDTPNLSCEL 60
M L+D++I ES +AEFFE FPLK+ L M ++ P S + + +
Sbjct: 90 MLLSDRSIIESCNAEFFEDEFPLKK------LKGIMSSVNVSQVDPSSSIKEIEH----V 149
Query: 61 ELRRSKRQRTEKSFGPDFLSTFIVE--RRDEIDCNFTNLYLIDEDLKTNQEALNSVDSNM 120
E RRSKR RTE SFGPDFL++F+ E D + +F +++L++ D KT QEA+ SVD+N+
Sbjct: 150 EPRRSKRCRTETSFGPDFLTSFLTENFHVDMLSEDFVSIFLLENDPKTYQEAITSVDANL 209
Query: 121 WKEAIKSELDSLVMYHTWELVDLPMGNKPIRCKWIFKRKTKPNGSIERYKSRLVVVGYTR 180
WKEAIKSE+DS++ HTWEL DLP GNKPI KWIFK+K +P+G++++YK+RLV+ G+T+
Sbjct: 210 WKEAIKSEVDSILSNHTWELTDLPKGNKPIGSKWIFKKKLRPDGTVDKYKARLVIRGFTQ 269
Query: 181 KQGVDYFDTYSPVTKITTIRALITLATIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFK 240
K G+DYFDTYSPVTKITTIR+LI++A I+ LLIHQMDVKTAFLNG+L+EEIYM QPEGF
Sbjct: 270 KHGLDYFDTYSPVTKITTIRSLISIAAINGLLIHQMDVKTAFLNGDLDEEIYMLQPEGFV 329
Query: 241 ISGQENKVCKLRKSLYGLKQASKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILIC 300
+SG E+KVCKLRKSLYGLKQA K+WYEKF+ TL +G+ +N+SD+CVYSK +LIC
Sbjct: 330 VSGLESKVCKLRKSLYGLKQAPKKWYEKFDRTLKQDGYIVNNSDSCVYSKRSKTGYVLIC 389
Query: 301 LYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLFLCQSHYVEK 360
LYVDDMLIFG +M I TK FLSS FEMKDLGEADVILGVKI++ + LCQSHY+E+
Sbjct: 390 LYVDDMLIFGADMHDINQTKAFLSSKFEMKDLGEADVILGVKIKRTWNGISLCQSHYIEQ 449
Query: 361 ILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSR 420
+LKKFD F+++PV+TP+D S LKKN +SVSQ EYAKIIGSVM+LMNYTRPDIAY VSR
Sbjct: 450 MLKKFDCFELNPVKTPYDPSILLKKNNHESVSQSEYAKIIGSVMFLMNYTRPDIAYTVSR 509
Query: 421 LSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSG 480
LSRYTHNP++ HW A+ L+RYL+GT++ CLH+NKFPAVLEGYCDANWVTDNDEV+STSG
Sbjct: 510 LSRYTHNPSKEHWSAIHRLMRYLRGTMELCLHYNKFPAVLEGYCDANWVTDNDEVSSTSG 569
Query: 481 YVFLLRGGAISWKSTKQTCIARSTMEFEFIALELAGQEAEWIKNLLEDVP 529
YVF++ GGAISWKS+KQTCIARSTME EFIALELAGQEAEW++ LL D+P
Sbjct: 570 YVFIMGGGAISWKSSKQTCIARSTMESEFIALELAGQEAEWLRGLLSDIP 609
BLAST of Cmc12g0326291 vs. ExPASy TrEMBL
Match:
A0A2N9EQT1 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4851 PE=4 SV=1)
HSP 1 Score: 666.0 bits (1717), Expect = 1.3e-187
Identity = 327/529 (61.81%), Postives = 408/529 (77.13%), Query Frame = 0
Query: 1 MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIASETPVSETVDTPNLSCEL 60
+ L TI E+RDA+FFE +FP+K++ + S + P++ S + + E+ T
Sbjct: 194 LVLQTNTIVETRDADFFEQIFPMKKTRF--SNESLPVTPQVRSISTLDESHSTQ------ 253
Query: 61 ELRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDLKTNQEALNSVDSNMWK 120
ELRRSKR + +FGPDF++ F+ E +D KT QEA+ SVD+ WK
Sbjct: 254 ELRRSKRPKIGTNFGPDFVTAFLTE----------------DDPKTYQEAMKSVDATFWK 313
Query: 121 EAIKSELDSLVMYHTWELVDLPMGNKPIRCKWIFKRKTKPNGSIERYKSRLVVVGYTRKQ 180
+AI SEL+S++ HTWELV+LP G K I KW+FK+K K +GSIE++K+RLV GYT+K+
Sbjct: 314 DAIHSELESIMGNHTWELVELPRGCKTIGSKWVFKKKLKADGSIEKFKARLVAKGYTQKE 373
Query: 181 GVDYFDTYSPVTKITTIRALITLATIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKIS 240
G+DYFDTYSPVT++TTIR L+ +A+I+ L+IHQMDVKTAFLNG+L+EEIYM QPEGF +
Sbjct: 374 GIDYFDTYSPVTRLTTIRILVAIASIYKLIIHQMDVKTAFLNGDLDEEIYMDQPEGFVVQ 433
Query: 241 GQENKVCKLRKSLYGLKQASKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLY 300
GQENKVCKLRKSLYGLKQA KQW+EKF+ TL++NGF +N SD CVYSK GA ++ICLY
Sbjct: 434 GQENKVCKLRKSLYGLKQAPKQWHEKFDKTLVSNGFAVNESDRCVYSKFSGASGVIICLY 493
Query: 301 VDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLFLCQSHYVEKIL 360
VDDMLIFGT+M + +TK FLSS+F+MKDLGEAD+ILG++I +N L L QSHY+EK+L
Sbjct: 494 VDDMLIFGTDMNAVKNTKDFLSSNFDMKDLGEADLILGIRIIRNNEGLTLSQSHYIEKVL 553
Query: 361 KKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLS 420
KKF+ +D PVRTP+D S HLKKN G VSQ EYAKIIGSVM+LMN TRPDIAYAVSRLS
Sbjct: 554 KKFNHYDYEPVRTPYDPSIHLKKNSGSPVSQSEYAKIIGSVMFLMNCTRPDIAYAVSRLS 613
Query: 421 RYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYV 480
RYTHNP HW+A+ LL+YLKGT++ L + PAVLEGYCDANW++DNDE NSTSGYV
Sbjct: 614 RYTHNPAHEHWNAITRLLKYLKGTMNLGLTYTGHPAVLEGYCDANWISDNDETNSTSGYV 673
Query: 481 FLLRGGAISWKSTKQTCIARSTMEFEFIALELAGQEAEWIKNLLEDVPL 530
F L GGAISWKS+KQTC ARSTME EF+ALE AG EAEW++NLL D+PL
Sbjct: 674 FTLGGGAISWKSSKQTCNARSTMESEFVALEKAGTEAEWLRNLLADIPL 698
BLAST of Cmc12g0326291 vs. ExPASy TrEMBL
Match:
A0A2N9H4B0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37208 PE=4 SV=1)
HSP 1 Score: 666.0 bits (1717), Expect = 1.3e-187
Identity = 327/529 (61.81%), Postives = 408/529 (77.13%), Query Frame = 0
Query: 1 MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIASETPVSETVDTPNLSCEL 60
+ L TI E+RDA+FFE +FP+K++ + S + P++ S + + E+ T
Sbjct: 704 LVLQTNTIVETRDADFFEQIFPMKKTRF--SNESLPVTPQVRSISTLDESHSTQ------ 763
Query: 61 ELRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDLKTNQEALNSVDSNMWK 120
ELRRSKR + +FGPDF++ F+ E +D KT QEA+ SVD+ WK
Sbjct: 764 ELRRSKRPKIGTNFGPDFVTAFLTE----------------DDPKTYQEAMKSVDATFWK 823
Query: 121 EAIKSELDSLVMYHTWELVDLPMGNKPIRCKWIFKRKTKPNGSIERYKSRLVVVGYTRKQ 180
+AI SEL+S++ HTWELV+LP G K I KW+FK+K K +GSIE++K+RLV GYT+K+
Sbjct: 824 DAIHSELESIMGNHTWELVELPRGCKTIGSKWVFKKKLKADGSIEKFKARLVAKGYTQKE 883
Query: 181 GVDYFDTYSPVTKITTIRALITLATIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGFKIS 240
G+DYFDTYSPVT++TTIR L+ +A+I+ L+IHQMDVKTAFLNG+L+EEIYM QPEGF +
Sbjct: 884 GIDYFDTYSPVTRLTTIRILVAIASIYKLIIHQMDVKTAFLNGDLDEEIYMDQPEGFVVQ 943
Query: 241 GQENKVCKLRKSLYGLKQASKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLY 300
GQENKVCKLRKSLYGLKQA KQW+EKF+ TL++NGF +N SD CVYSK GA ++ICLY
Sbjct: 944 GQENKVCKLRKSLYGLKQAPKQWHEKFDKTLVSNGFAVNESDRCVYSKFSGASGVIICLY 1003
Query: 301 VDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLFLCQSHYVEKIL 360
VDDMLIFGT+M + +TK FLSS+F+MKDLGEAD+ILG++I +N L L QSHY+EK+L
Sbjct: 1004 VDDMLIFGTDMNAVKNTKDFLSSNFDMKDLGEADLILGIRIIRNNEGLTLSQSHYIEKVL 1063
Query: 361 KKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLS 420
KKF+ +D PVRTP+D S HLKKN G VSQ EYAKIIGSVM+LMN TRPDIAYAVSRLS
Sbjct: 1064 KKFNHYDYEPVRTPYDPSIHLKKNSGSPVSQSEYAKIIGSVMFLMNCTRPDIAYAVSRLS 1123
Query: 421 RYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNSTSGYV 480
RYTHNP HW+A+ LL+YLKGT++ L + PAVLEGYCDANW++DNDE NSTSGYV
Sbjct: 1124 RYTHNPAHEHWNAITRLLKYLKGTMNLGLTYTGHPAVLEGYCDANWISDNDETNSTSGYV 1183
Query: 481 FLLRGGAISWKSTKQTCIARSTMEFEFIALELAGQEAEWIKNLLEDVPL 530
F L GGAISWKS+KQTC ARSTME EF+ALE AG EAEW++NLL D+PL
Sbjct: 1184 FTLGGGAISWKSSKQTCNARSTMESEFVALEKAGTEAEWLRNLLADIPL 1208
BLAST of Cmc12g0326291 vs. ExPASy TrEMBL
Match:
A0A6A2Y4J7 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112079pilonHSYRG00011 PE=4 SV=1)
HSP 1 Score: 629.8 bits (1623), Expect = 1.0e-176
Identity = 315/509 (61.89%), Postives = 390/509 (76.62%), Query Frame = 0
Query: 1 MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRM-HDPEIASETPV--SETVDTPNLS 60
M L D +I ESRD FFE+ FPLK+ ++ ++ + P +S P SE +D
Sbjct: 558 MLLQDYSICESRDVVFFENNFPLKEP--RMNIETQIEYIPSTSSSNPARSSEQID----- 617
Query: 61 CELELRRSKRQRTEKSFGPDFLSTFI--VERRDEIDCNFTNLYLIDEDLKTNQEALNSVD 120
E RRSKRQR E SFGPDF+ +FI + D I ++L+DED K +EA+ S++
Sbjct: 618 --FEPRRSKRQRVETSFGPDFIISFISVINDLDSISNPIAQIFLLDEDPKNFEEAIRSIN 677
Query: 121 SNMWKEAIKSELDSLVMYHTWELVDLPMGNKPIRCKWIFKRKTKPNGSIERYKSRLVVVG 180
++ WK A+ EL+S++ HTWELVDLP G KPI KW+F++K +P+GSI+RYK+RLVV G
Sbjct: 678 ASFWKSAVSDELESIMSNHTWELVDLPKGFKPISNKWVFRKKLRPDGSIQRYKARLVVKG 737
Query: 181 YTRKQGVDYFDTYSPVTKITTIRALITLATIHNLLIHQMDVKTAFLNGNLEEEIYMTQPE 240
+T++ G+DYFDTYSPVTKI+TIRAL LA+IH L +HQMDVKTAFLNG+L+EEIYM QP
Sbjct: 738 FTQRFGLDYFDTYSPVTKISTIRALFALASIHKLQVHQMDVKTAFLNGDLDEEIYMEQPL 797
Query: 241 GFKISGQENKVCKLRKSLYGLKQASKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCI 300
GF+ G E KV +L+KSLYGLKQA KQWYEKF+ T+++ GF +N SD CVYSKM +C+
Sbjct: 798 GFEAPGMEGKVYRLKKSLYGLKQAPKQWYEKFHKTILSFGFVVNGSDACVYSKMFDTECV 857
Query: 301 LICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLFLCQSHY 360
+I LYVDDMLIF +N+E I K FLS+ FEM LGE DVILGV++ K + LCQ+HY
Sbjct: 858 IISLYVDDMLIFSSNIESINKVKNFLSTKFEMTYLGEVDVILGVEVTKTEKGFSLCQAHY 917
Query: 361 VEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYA 420
++K+LKKFDSFDV PVRTP+D S HL KNKG SVSQ EYAK+IGS+M+LMNYTRPDIAYA
Sbjct: 918 IDKVLKKFDSFDVVPVRTPYDPSIHLVKNKGSSVSQTEYAKLIGSLMFLMNYTRPDIAYA 977
Query: 421 VSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYCDANWVTDNDEVNS 480
VSRLSRYTHNP+ HW AL+ LL+YLKGT+D+ L F FPAVLEGYCDANWV+DNDEV+S
Sbjct: 978 VSRLSRYTHNPSGEHWIALKRLLKYLKGTLDWKLEFAGFPAVLEGYCDANWVSDNDEVSS 1037
Query: 481 TSGYVFLLRGGAISWKSTKQTCIARSTME 505
TSGYVF L G AISWKS+KQTCIARSTME
Sbjct: 1038 TSGYVFTLGGAAISWKSSKQTCIARSTME 1057
BLAST of Cmc12g0326291 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 301.2 bits (770), Expect = 1.6e-81
Identity = 156/418 (37.32%), Postives = 247/418 (59.09%), Query Frame = 0
Query: 118 MWKEAIKSELDSLVMYHTWELVDLPMGNKPIRCKWIFKRKTKPNGSIERYKSRLVVVGYT 177
+W A+ E+ ++ HTWE+ LP KPI CKW++K K +G+IERYK+RLV GYT
Sbjct: 97 VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYT 156
Query: 178 RKQGVDYFDTYSPVTKITTIRALITLATIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGF 237
+++G+D+ +T+SPV K+T+++ ++ ++ I+N +HQ+D+ AFLNG+L+EEIYM P G+
Sbjct: 157 QQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGY 216
Query: 238 KI----SGQENKVCKLRKSLYGLKQASKQWYEKFNNTLITNGFKINSSDTCVYSKMVGAD 297
S N VC L+KS+YGLKQAS+QW+ KF+ TLI GF + SD + K+
Sbjct: 217 AARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATL 276
Query: 298 CILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLFLCQS 357
+ + +YVDD++I N + + K L S F+++DLG LG++I ++ + +CQ
Sbjct: 277 FLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQR 336
Query: 358 HYVEKILKKFDSFDVSPVRTPFDASKHLKKNK-GDSVSQPEYAKIIGSVMYLMNYTRPDI 417
Y +L + P P D S + GD V Y ++IG +MYL TR DI
Sbjct: 337 KYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYL-QITRLDI 396
Query: 418 AYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDND 477
++AV++LS+++ P H A+ +L Y+KGT+ L ++ + L+ + DA++ + D
Sbjct: 397 SFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKD 456
Query: 478 EVNSTSGYVFLLRGGAISWKSTKQTCIARSTMEFEFIALELAGQEAEWIKNLLEDVPL 530
ST+GY L ISWKS KQ +++S+ E E+ AL A E W+ ++ L
Sbjct: 457 TRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL 513
BLAST of Cmc12g0326291 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 144.8 bits (364), Expect = 1.9e-34
Identity = 78/224 (34.82%), Postives = 124/224 (55.36%), Query Frame = 0
Query: 297 ICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLFLCQSHYV 356
+ LYVDD+L+ G++ L+ F LSS F MKDLG LG++I+ + + LFL Q+ Y
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 357 EKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAV 416
E+IL D P+ TP + + ++ I+G++ YL TRPDI+YAV
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYL-TLTRPDISYAV 122
Query: 417 SRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYCDANWVTDNDEVNS 476
+ + + H P +D L+ +LRY+KGTI + L+ +K + ++ +CD++W S
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182
Query: 477 TSGYVFLLRGGAISWKSTKQTCIARSTMEFEFIALELAGQEAEW 520
T+G+ L ISW + +Q ++RS+ E E+ AL L E W
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of Cmc12g0326291 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 80.5 bits (197), Expect = 4.5e-15
Identity = 34/86 (39.53%), Postives = 57/86 (66.28%), Query Frame = 0
Query: 119 WKEAIKSELDSLVMYHTWELVDLPMGNKPIRCKWIFKRKTKPNGSIERYKSRLVVVGYTR 178
W +A++ ELD+L TW LV P+ + CKW+FK K +G+++R K+RLV G+ +
Sbjct: 40 WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99
Query: 179 KQGVDYFDTYSPVTKITTIRALITLA 205
++G+ + +TYSPV + TIR ++ +A
Sbjct: 100 EEGIYFVETYSPVVRTATIRTILNVA 125
BLAST of Cmc12g0326291 vs. TAIR 10
Match:
ATMG00240.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 48.1 bits (113), Expect = 2.5e-05
Identity = 26/83 (31.33%), Postives = 47/83 (56.63%), Query Frame = 0
Query: 402 MYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEG 461
MYL TRPD+ +AV+RLS+++ A+ +L Y+KGT+ L ++ + L+
Sbjct: 1 MYL-TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 60
Query: 462 YCDANWVTDNDEVNSTSGYVFLL 484
+ D++W + D S +G+ L+
Sbjct: 61 FADSDWASCPDTRRSVTGFCSLV 82
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK06518.1 | 3.2e-297 | 96.03 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAD6453934.1 | 1.1e-199 | 65.28 | hypothetical protein E3N88_08640 [Mikania micrantha] | [more] |
KAG7571733.1 | 9.6e-185 | 63.27 | Integrase catalytic core [Arabidopsis suecica] | [more] |
KAG7551885.1 | 2.8e-184 | 63.08 | Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa] | [more] |
KAG7592238.1 | 2.8e-184 | 63.08 | Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 6.6e-104 | 43.42 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Q94HW2 | 9.9e-84 | 39.67 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.4e-82 | 38.53 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P04146 | 1.6e-78 | 35.22 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
P25600 | 3.7e-38 | 34.86 | Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3C5T2 | 1.5e-297 | 96.03 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5N6PGV2 | 5.1e-200 | 65.28 | Reverse transcriptase Ty1/copia-type domain-containing protein OS=Mikania micran... | [more] |
A0A2N9EQT1 | 1.3e-187 | 61.81 | Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... | [more] |
A0A2N9H4B0 | 1.3e-187 | 61.81 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37208 PE=4 SV=1 | [more] |
A0A6A2Y4J7 | 1.0e-176 | 61.89 | Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112079pilon... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 1.6e-81 | 37.32 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00810.1 | 1.9e-34 | 34.82 | DNA/RNA polymerases superfamily protein | [more] |
ATMG00820.1 | 4.5e-15 | 39.53 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |
ATMG00240.1 | 2.5e-05 | 31.33 | Gag-Pol-related retrotransposon family protein | [more] |