Cmc12g0326251 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0326251
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotransposon protein
LocationCMiso1.1chr12: 16708994 .. 16712816 (+)
RNA-Seq ExpressionCmc12g0326251
SyntenyCmc12g0326251
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATAATTTAAACGTTACACAACGTTAACAATTTACATTTAGTAAACAATTTTTAAATTAGTACTCATACATCATATTTTTTTTCTGCCCGCAGTCGCATCCTGCAGCGAAAGGACTCCTGAACAAACCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCGGGATAGGGCGACCGGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCAGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGATGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATGTGGCGCTCGACCAAACAAACGAGCAACTCAGGGAGATTGCGCAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTCCGGGGTTTCGTACTCATGCCTGAGGATGAAAGGGAGGGCTTCTGTAGAGTCCTCCTACGTGACATAGAGAGATAGTTTCTGTTTGTAGTGACCTGTGTTGCTTATTATTTCGTTACGTATTTTTCTGTATCATGTATTCGATGGTTTATGCATTTTGTATTGTCAAGAACTTCTTTTGTTCATTCCTAATGTTTATTTTAAATGAAAGAAACTAGTCAGAATTTTCGAAAAGCGTTATAACGGCTATTTATATAGGTTTAAAATTGGATGACTTCGCTATCGGCCATTCGAAATATTGAATAATTTTTTTATCTTTATAAGAAATTAATTGTAATAAATTTATCACAATATGTTCAGAAATTAATTTTAATTTGGCCAACTGTATATATTAATTTAATAACATTACACATACAACAAATAAAATAGGAGAATAATACGGATTCGAGGATTTCGTAAAAAAATATGCAATAATTTTTTTATGATATTTACAATTGAATTTAAAAATATTATACAACATAAAAAATTAATTAACCCACCCCATTTAACAATTTTCCCAAATAAAATTTATCACAAAATCCACATAAACCTACCCACTTAACCCTTCCCCCAAACACATTTTATCATAAAATCCCCATTAAACTACCCACCTAACCCTTCCCCCAAACACATCTTATCATAAAATCCCCATTAATCCTCCCCACCTAACCCTTCCCCAAACACATTTTATCATAAAATCCCCATTAACTCTTCCCACCTAACCCTTCCCCCAAACACATATTATCATAAAACTACCTTTTTAAACCCTTCCCCCAAACAAGGGTTATGATAAAACTAGGTTTAACTAACACTGTTTTATCTTAACACTAACCCTTCCCTGAATCAACCCTTCCCCCAAACGCACCCTCAGGGTTGTGCTTGATAGAAAATTTCCAATTTTGTATAAATGATTAGTTCCAATTGCCCAAAGTTTGATTAGTTCAACGTTATCTAAAACTTACAAATTAAATTTGAAAACGATAGAGTAGATTTGAATTGATTTTTTAATTGTTTAAATAATAAGCATTATAAATATAAAAGAAATATTTATAAACACATCTAAAAAGATCATCCAAACATGGATGTAAATTTGAACGCTTAGAAATCTCCTAGACACACAAGTTTTGTAATTATTAAAATATATAATAGGGTAAGAACTTGAAAGTTAAAAAAATCTGAAAATGTATTTGAAAGATTTAAACACACAAAAAATCAAAATATGAGAACTTAATGTGATTCGAACATCCTACCATTCTCAATTAAATAGGTAAATGGGGAGTTATTAGAATAAAAGATAAATAGACACATTAAATATATATGAAATTAAATAGGTGTAAAGGTTAGGATGTAGACTTGTAAATAATTCTAAAGTGAGAGAGGCACATGTTAAGTTAAATTTTTGTCAGTTTTTGTACGTATTATACATATTTTTTCTGTGGTTTCTTTTACAGATTTGTCTCTCTCTGCTCCTATATTTTGATTTCTGGAGTGTATGGATGCTGTTCTAAAGTTTAGACAATTCAGAACAGACACACCTGATGTAATGTGTGAAAAACAACTTCTATAGACACACCATAAATTGACTTTTCTTCTCTTAGTTAACGTACAAAGTGTTTTCATGCGTAGGTTCAAACAGCTTAAACTTGAATTTAGTAACAAAAGTTGAGCGTACCCATATGGACCCTAGTGGAAACAATTTAATATGGTAGAATTAGTACCATAACTTTTTCAAAAAACTAACATGAGAAAGATCCAATTCACATTTGAAACAACAGCTGCTCCATTTCTTCTCTAGAGAATTAAAGATCATATACACAGGCTTGATCCACTAAACAAAAGTGTTAATTAAAACCTACCAACTCACCAACTTTGATTAATGATTTAACATCATTTCCTTCCCATGTGATATTGATTTCCATTTGTTATTGGTCTTCATACAATATTCAAGCACACAAGTCAAAAAGACTCTTAAAAGCATTGACAACATAACAAATTGAAAGCTTATATATGGAGAGTGAGGGGATTGACTTCCATTCCATGTTATGTTTTGCTTTAAAATGGAAGAAAGAGCAAAGAGAGGGCCTATATATATATATATATGTATGTATGTATAACAAAATTAAAACTTGAAATTATGAGACAACATTATTTGAATTCCAATTCTATTATCTTTGGTTCGCTTTGAAAGTGGAAAAAAAAGAACTCCTGAAATACAATTAAAAAAAAAGGATGAATTTAACATTGAAATGAGAAAACATTTGAATTCAAATTTTGTTTTGAAGATAAAAAAAGGGTCTAGACAAAAAGAAGATGAAAACTTGGGGAGGATAAGGGTATTGATTTCCCATATATTCCAATTCTTTGGATGTTTTAAAGATGAAAACTTGAGAAGAAAGGACATTAACACCTAAAATTTTTCATATCATTGATTTTCCTTTACAATGAAATTTAACTTTTAGAGAGAAAAAACTTAAGGAGAGAGAAAGAAGATTAATTATTGAATTCCCATTTCCACATCTTAATGACCTTCCCATGTGATTTGGTTGGAATTCAATAGCAAATCACAACTGAAATTACAAATCAATTGAAAGGAAAACACAAAAAGAAAAAACAACCTTGCAATTTAACAACCCGTTCCAAATAAACAAAATCAACCCACCACTTGGGAAGAAAAAATCTATGAGAATTACAACATTAAAGTTAGTTTCATATAAATGGCAAAGACAATAAATAATCAATGAATAAATAAGACCACAAACAGCTAGTTTCAACTTTCAATAGAGAAATTAAAAAGAGAAAAAAGGGGGTGGGGATATGTGTACCTGAAATATGAAGGAATTGGAGGCATTGTTAAATGAAAATTTGTTGGTGAATGAGTGATTGAAGCTGCTAGAATGACCTGATTTTCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGAAAAGCATAACATCATCAAGATCCATAGAAGAAAACCCATTTTTTGCCTTATTAATTTCAATAATATTGCTTTATGAAAATCTCTAAATTAAAAGAGAATTCAGCAAATTAAATCAGATCATGCTGGCAGCTTCAACCTCTCAAACCAACACATATAATCCCCAAAATCTCAACCATCAAGAGAGAGAGAGAAAGAGAGATGTCAAAGAGAGATGTCAAAGAGAGAGAGAGAGAGAGAGAGCTATTTATTT

mRNA sequence

TATAATTTAAACGTTACACAACGTTAACAATTTACATTTAGTAAACAATTTTTAAATTAGTACTCATACATCATATTTTTTTTCTGCCCGCAGTCGCATCCTGCAGCGAAAGGACTCCTGAACAAACCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCGGGATAGGGCGACCGGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCAGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGATGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATGTGGCGCTCGACCAAACAAACGAGCAACTCAGGGAGATTGCGCAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTCCGGGGTTTCGTACTCATGCCTGAGGATGAAAGGGAGGGCTTCTGTAGAGTCCTCCTACGTGACATAGAGAGATAGTTTCTGTTTGTAGTGACCTGTGTTGCTTATTATTTCGTTACGTATTTTTCTGTATCATGTATTCGATGGTTTATGCATTTTGTATTGTCAAGAACTTCTTTTGTTCATTCCTAATGTTTATTTTAAATGAAAGAAACTAGTCAGAATTTTCGAAAAGCGTTATAACGGCTATTTATATAGGTTTAAAATTGGATGACTTCGCTATCGGCCATTCGAAATATTGAATAATTTTTTTATCTTTATAAGAAATTAATTGTAATAAATTTATCACAATATGTTCAGAAATTAATTTTAATTTGGCCAACTGTATATATTAATTTAATAACATTACACATACAACAAATAAAATAGGAGAATAATACGGATTCGAGGATTTCGTAAAAAAATATGCAATAATTTTTTTATGATATTTACAATTGAATTTAAAAATATTATACAACATAAAAAATTAATTAACCCACCCCATTTAACAATTTTCCCAAATAAAATTTATCACAAAATCCACATAAACCTACCCACTTAACCCTTCCCCCAAACACATTTTATCATAAAATCCCCATTAAACTACCCACCTAACCCTTCCCCCAAACACATCTTATCATAAAATCCCCATTAATCCTCCCCACCTAACCCTTCCCCAAACACATTTTATCATAAAATCCCCATTAACTCTTCCCACCTAACCCTTCCCCCAAACACATATTATCATAAAACTACCTTTTTAAACCCTTCCCCCAAACAAGGGTTATGATAAAACTAGGTTTAACTAACACTGTTTTATCTTAACACTAACCCTTCCCTGAATCAACCCTTCCCCCAAACGCACCCTCAGGGTTGTGCTTGATAGAAAATTTCCAATTTTGTATAAATGATTAGTTCCAATTGCCCAAAGTTTGATTAGTTCAACGTTATCTAAAACTTACAAATTAAATTTGAAAACGATAGAGTAGATTTGAATTGATTTTTTAATTGTTTAAATAATAAGCATTATAAATATAAAAGAAATATTTATAAACACATCTAAAAAGATCATCCAAACATGGATGTAAATTTGAACGCTTAGAAATCTCCTAGACACACAAGTTTTGTAATTATTAAAATATATAATAGGGTAAGAACTTGAAAGTTAAAAAAATCTGAAAATGTATTTGAAAGATTTAAACACACAAAAAATCAAAATATGAGAACTTAATGTGATTCGAACATCCTACCATTCTCAATTAAATAGGTAAATGGGGAGTTATTAGAATAAAAGATAAATAGACACATTAAATATATATGAAATTAAATAGGTGTAAAGGTTAGGATGTAGACTTGTAAATAATTCTAAAGTGAGAGAGGCACATGTTAAGTTAAATTTTTGTCAGTTTTTGTACGTATTATACATATTTTTTCTGTGGTTTCTTTTACAGATTTGTCTCTCTCTGCTCCTATATTTTGATTTCTGGAGTGTATGGATGCTGTTCTAAAGTTTAGACAATTCAGAACAGACACACCTGATGTAATGTGTGAAAAACAACTTCTATAGACACACCATAAATTGACTTTTCTTCTCTTAGTTAACGTACAAAGTGTTTTCATGCGTAGGTTCAAACAGCTTAAACTTGAATTTAGTAACAAAAGTTGAGCGTACCCATATGGACCCTAGTGGAAACAATTTAATATGGTAGAATTAGTACCATAACTTTTTCAAAAAACTAACATGAGAAAGATCCAATTCACATTTGAAACAACAGCTGCTCCATTTCTTCTCTAGAGAATTAAAGATCATATACACAGGCTTGATCCACTAAACAAAAGTGTTAATTAAAACCTACCAACTCACCAACTTTGATTAATGATTTAACATCATTTCCTTCCCATGTGATATTGATTTCCATTTGTTATTGGTCTTCATACAATATTCAAGCACACAAGTCAAAAAGACTCTTAAAAGCATTGACAACATAACAAATTGAAAGCTTATATATGGAGAGTGAGGGGATTGACTTCCATTCCATGTTATGTTTTGCTTTAAAATGGAAGAAAGAGCAAAGAGAGGGCCTATATATATATATATATGTATGTATGTATAACAAAATTAAAACTTGAAATTATGAGACAACATTATTTGAATTCCAATTCTATTATCTTTGGTTCGCTTTGAAAGTGGAAAAAAAAGAACTCCTGAAATACAATTAAAAAAAAAGGATGAATTTAACATTGAAATGAGAAAACATTTGAATTCAAATTTTGTTTTGAAGATAAAAAAAGGGTCTAGACAAAAAGAAGATGAAAACTTGGGGAGGATAAGGGTATTGATTTCCCATATATTCCAATTCTTTGGATGTTTTAAAGATGAAAACTTGAGAAGAAAGGACATTAACACCTAAAATTTTTCATATCATTGATTTTCCTTTACAATGAAATTTAACTTTTAGAGAGAAAAAACTTAAGGAGAGAGAAAGAAGATTAATTATTGAATTCCCATTTCCACATCTTAATGACCTTCCCATGTGATTTGGTTGGAATTCAATAGCAAATCACAACTGAAATTACAAATCAATTGAAAGGAAAACACAAAAAGAAAAAACAACCTTGCAATTTAACAACCCGTTCCAAATAAACAAAATCAACCCACCACTTGGGAAGAAAAAATCTATGAGAATTACAACATTAAAGTTAGTTTCATATAAATGGCAAAGACAATAAATAATCAATGAATAAATAAGACCACAAACAGCTAGTTTCAACTTTCAATAGAGAAATTAAAAAGAGAAAAAAGGGGGTGGGGATATGTGTACCTGAAATATGAAGGAATTGGAGGCATTGTTAAATGAAAATTTGTTGGTGAATGAGTGATTGAAGCTGCTAGAATGACCTGATTTTCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGAAAAGCATAACATCATCAAGATCCATAGAAGAAAACCCATTTTTTGCCTTATTAATTTCAATAATATTGCTTTATGAAAATCTCTAAATTAAAAGAGAATTCAGCAAATTAAATCAGATCATGCTGGCAGCTTCAACCTCTCAAACCAACACATATAATCCCCAAAATCTCAACCATCAAGAGAGAGAGAGAAAGAGAGATGTCAAAGAGAGATGTCAAAGAGAGAGAGAGAGAGAGAGAGCTATTTATTT

Coding sequence (CDS)

ATGTATTTGGTCGGGATAGGGCGACCGGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCAGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGATGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATGTGGCGCTCGACCAAACAAACGAGCAACTCAGGGAGATTGCGCAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTCCGGGGTTTCGTACTCATGCCTGAGGATGAAAGGGAGGGCTTCTGTAGAGTCCTCCTACGTGACATAGAGAGATAG

Protein sequence

MYLVGIGRPVGSLRHSRTWGLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDLLALQMVGPDQVDRRGRGEVSETSSLKRYMWRSTKQTSNSGRLRSGQHATLQMTTTCAREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER
Homology
[Close]
BLAST of Cmc12g0326251 vs. NCBI nr
Match: KAA0062452.1 (hypothetical protein E6C27_scaffold130G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 223.0 bits (567), Expect = 1.9e-54
Identity = 110/118 (93.22%), Postives = 111/118 (94.07%), Query Frame = 0 

Query: 1   MYLVGIGRPVGSLRHSRTWGLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDL 60
           MY V IGRPVG LRHS TWGLTS VADMTDLIWGMETRTSRPCT RELTSRRTMYVHPDL
Sbjct: 1   MYSVAIGRPVGLLRHSWTWGLTSLVADMTDLIWGMETRTSRPCTTRELTSRRTMYVHPDL 60

Query: 61  LALQMVGPDQVDRRGRGEVSETSSLKRYMWRSTKQTSNSGRLRSGQHATLQMTTTCAR 119
           LALQ VGPDQVDRRGRGEVSETSSLKRY+WRSTKQTSNSGRLRSGQHATLQMTTTCAR
Sbjct: 61  LALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCAR 118

[Close]
BLAST of Cmc12g0326251 vs. NCBI nr
Match: TYK27431.1 (hypothetical protein E5676_scaffold325G001260 [Cucumis melo var. makuwa])

HSP 1 Score: 223.0 bits (567), Expect = 1.9e-54
Identity = 110/118 (93.22%), Postives = 111/118 (94.07%), Query Frame = 0 

Query: 1   MYLVGIGRPVGSLRHSRTWGLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDL 60
           MY V IGRPVG LRHS TWGLTS VADMTDLIWGMETRTSRPCT RELTSRRTMYVHPDL
Sbjct: 1   MYSVAIGRPVGLLRHSWTWGLTSLVADMTDLIWGMETRTSRPCTTRELTSRRTMYVHPDL 60

Query: 61  LALQMVGPDQVDRRGRGEVSETSSLKRYMWRSTKQTSNSGRLRSGQHATLQMTTTCAR 119
           LALQ VGPDQVDRRGRGEVSETSSLKRY+WRSTKQTSNSGRLRSGQHATLQMTTTCAR
Sbjct: 61  LALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCAR 118

[Close]
BLAST of Cmc12g0326251 vs. NCBI nr
Match: KAA0054568.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 190.3 bits (482), Expect = 1.4e-44
Identity = 97/117 (82.91%), Postives = 101/117 (86.32%), Query Frame = 0 

Query: 2   YLVGIGRPVGSLRHSRTWGLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDLL 61
           Y+ G  R  G       WGLTS VADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDLL
Sbjct: 134 YVFGRDRATGRF----AWGLTSLVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDLL 193

Query: 62  ALQMVGPDQVDRRGRGEVSETSSLKRYMWRSTKQTSNSGRLRSGQHATLQMTTTCAR 119
           ALQ VGP+QVDRR RG+VSETSSLKRY+WRSTKQTSNSGRLRSGQHATLQM TTCAR
Sbjct: 194 ALQRVGPNQVDRRRRGKVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMITTCAR 246

[Close]
BLAST of Cmc12g0326251 vs. NCBI nr
Match: KAA0056563.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 189.9 bits (481), Expect = 1.8e-44
Identity = 99/120 (82.50%), Postives = 103/120 (85.83%), Query Frame = 0 

Query: 2   YLVGIGRPVGSLRHSRTW---GLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHP 61
           Y+ G  R  G  R + T+   G    VADMTDLIWGMETRTSRPCTARELTSRRTMYVHP
Sbjct: 107 YVFGRDRATG--RFAETFADVGSNEPVADMTDLIWGMETRTSRPCTARELTSRRTMYVHP 166

Query: 62  DLLALQMVGPDQVDRRGRGEVSETSSLKRYMWRSTKQTSNSGRLRSGQHATLQMTTTCAR 119
           DLLALQ VGPDQVDRRGRGEVSETSSLKRY+WRSTKQTSNSGRLRSGQHATLQMTTTCAR
Sbjct: 167 DLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCAR 224

[Close]
BLAST of Cmc12g0326251 vs. NCBI nr
Match: TYK08719.1 (hypothetical protein E5676_scaffold76G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 172.9 bits (437), Expect = 2.2e-39
Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 0 

Query: 28  MTDLIWGMETRTSRPCTARELTSRRTMYVHPDLLALQMVGPDQVDRRGRGEVSETSSLKR 87
           MTDLIWGMETRTS PCTARELTSRRTMYVHPDLLALQ VG DQVDRRGRGEVSETSSLKR
Sbjct: 1   MTDLIWGMETRTSSPCTARELTSRRTMYVHPDLLALQRVGSDQVDRRGRGEVSETSSLKR 60

Query: 88  YMWRSTKQTSNSGRLRSGQHATLQMTTTCAR 119
           Y+W STKQTSNSGRLRSGQHATLQMTTTCAR
Sbjct: 61  YIWGSTKQTSNSGRLRSGQHATLQMTTTCAR 91

[Close]
BLAST of Cmc12g0326251 vs. ExPASy TrEMBL
Match: A0A5A7V2L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00330 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 9.2e-55
Identity = 110/118 (93.22%), Postives = 111/118 (94.07%), Query Frame = 0 

Query: 1   MYLVGIGRPVGSLRHSRTWGLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDL 60
           MY V IGRPVG LRHS TWGLTS VADMTDLIWGMETRTSRPCT RELTSRRTMYVHPDL
Sbjct: 1   MYSVAIGRPVGLLRHSWTWGLTSLVADMTDLIWGMETRTSRPCTTRELTSRRTMYVHPDL 60

Query: 61  LALQMVGPDQVDRRGRGEVSETSSLKRYMWRSTKQTSNSGRLRSGQHATLQMTTTCAR 119
           LALQ VGPDQVDRRGRGEVSETSSLKRY+WRSTKQTSNSGRLRSGQHATLQMTTTCAR
Sbjct: 61  LALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCAR 118

[Close]
BLAST of Cmc12g0326251 vs. ExPASy TrEMBL
Match: A0A5D3DUQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001260 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 9.2e-55
Identity = 110/118 (93.22%), Postives = 111/118 (94.07%), Query Frame = 0 

Query: 1   MYLVGIGRPVGSLRHSRTWGLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDL 60
           MY V IGRPVG LRHS TWGLTS VADMTDLIWGMETRTSRPCT RELTSRRTMYVHPDL
Sbjct: 1   MYSVAIGRPVGLLRHSWTWGLTSLVADMTDLIWGMETRTSRPCTTRELTSRRTMYVHPDL 60

Query: 61  LALQMVGPDQVDRRGRGEVSETSSLKRYMWRSTKQTSNSGRLRSGQHATLQMTTTCAR 119
           LALQ VGPDQVDRRGRGEVSETSSLKRY+WRSTKQTSNSGRLRSGQHATLQMTTTCAR
Sbjct: 61  LALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCAR 118

[Close]
BLAST of Cmc12g0326251 vs. ExPASy TrEMBL
Match: A0A5A7UHW5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G003600 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 6.6e-45
Identity = 97/117 (82.91%), Postives = 101/117 (86.32%), Query Frame = 0 

Query: 2   YLVGIGRPVGSLRHSRTWGLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDLL 61
           Y+ G  R  G       WGLTS VADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDLL
Sbjct: 134 YVFGRDRATGRF----AWGLTSLVADMTDLIWGMETRTSRPCTARELTSRRTMYVHPDLL 193

Query: 62  ALQMVGPDQVDRRGRGEVSETSSLKRYMWRSTKQTSNSGRLRSGQHATLQMTTTCAR 119
           ALQ VGP+QVDRR RG+VSETSSLKRY+WRSTKQTSNSGRLRSGQHATLQM TTCAR
Sbjct: 194 ALQRVGPNQVDRRRRGKVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMITTCAR 246

[Close]
BLAST of Cmc12g0326251 vs. ExPASy TrEMBL
Match: A0A5A7UL03 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00680 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 8.6e-45
Identity = 99/120 (82.50%), Postives = 103/120 (85.83%), Query Frame = 0 

Query: 2   YLVGIGRPVGSLRHSRTW---GLTSQVADMTDLIWGMETRTSRPCTARELTSRRTMYVHP 61
           Y+ G  R  G  R + T+   G    VADMTDLIWGMETRTSRPCTARELTSRRTMYVHP
Sbjct: 107 YVFGRDRATG--RFAETFADVGSNEPVADMTDLIWGMETRTSRPCTARELTSRRTMYVHP 166

Query: 62  DLLALQMVGPDQVDRRGRGEVSETSSLKRYMWRSTKQTSNSGRLRSGQHATLQMTTTCAR 119
           DLLALQ VGPDQVDRRGRGEVSETSSLKRY+WRSTKQTSNSGRLRSGQHATLQMTTTCAR
Sbjct: 167 DLLALQRVGPDQVDRRGRGEVSETSSLKRYIWRSTKQTSNSGRLRSGQHATLQMTTTCAR 224

[Close]
BLAST of Cmc12g0326251 vs. ExPASy TrEMBL
Match: A0A5D3CED6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00220 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.1e-39
Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 0 

Query: 28  MTDLIWGMETRTSRPCTARELTSRRTMYVHPDLLALQMVGPDQVDRRGRGEVSETSSLKR 87
           MTDLIWGMETRTS PCTARELTSRRTMYVHPDLLALQ VG DQVDRRGRGEVSETSSLKR
Sbjct: 1   MTDLIWGMETRTSSPCTARELTSRRTMYVHPDLLALQRVGSDQVDRRGRGEVSETSSLKR 60

Query: 88  YMWRSTKQTSNSGRLRSGQHATLQMTTTCAR 119
           Y+W STKQTSNSGRLRSGQHATLQMTTTCAR
Sbjct: 61  YIWGSTKQTSNSGRLRSGQHATLQMTTTCAR 91

The following BLAST results are available for this feature:
BLAST of Cmc12g0326251 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0062452.11.9e-5493.22hypothetical protein E6C27_scaffold130G00330 [Cucumis melo var. makuwa][more]
TYK27431.11.9e-5493.22hypothetical protein E5676_scaffold325G001260 [Cucumis melo var. makuwa][more]
KAA0054568.11.4e-4482.91retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0056563.11.8e-4482.50retrotransposon protein [Cucumis melo var. makuwa][more]
TYK08719.12.2e-3994.51hypothetical protein E5676_scaffold76G00220 [Cucumis melo var. makuwa][more]
BLAST of Cmc12g0326251 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc12g0326251 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V2L29.2e-5593.22Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DUQ69.2e-5593.22Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UHW56.6e-4582.91Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UL038.6e-4582.50Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CED61.1e-3994.51Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Cmc12g0326251 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0326251.1Cmc12g0326251.1mRNA