Cmc12g0326231 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0326231
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description5'-nucleotidase domain-containing protein DDB_G0275467
LocationCMiso1.1chr12: 16697266 .. 16699234 (-)
RNA-Seq ExpressionCmc12g0326231
SyntenyCmc12g0326231
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGTTGAGCCCGAAAGAAATCAAAGAGATATATGGCACACGATATATTGGGGGAGACCAAGCTTCCGGGCTTGTTGGCCTAATGGATTTCTTTTGCTTCAGTGAGGTTTGTTGTTTCCTTACCCCGTTCTAGTTCTATGTTATGTCATTCATGAACTAAACCAATGAGAAGTATACATATACTGGTGAAAAAATAATGGGTAATGAATGTTATCTCTTAGTTTACCACATAAAATGTATAACATAAATGATTTTGAATGATCAGATAACTTTAGTTGGTAGACATTTAAGTTCTGAATGTGCTAAAAATTGCAAAATAAAATATTGCTCACTAAAATTAAAGTTAATATGGATTTGCTTTTAAACCTAACCTAAGTCCACATAGTTTTGTTTCTTAATTTCTCTATGGTCCATGGAGATATTGTTCTTACTTATACACTCTAGATCTCTAACAACTTTTACAAATCCTATTATGTGTGATAATCTTACAACTTTTGATTCACATAAAGTCTTTGAGGATTATTACTTTTAGTTGTCTTCCAAAGATTTTATCCATGTGAGCTATGTTGAAAATTCATTTATTAATTATGAGGAGTTTTCTATAGTTCTACAAGAGTATGGTATTATATATCCACCATAGATTGCGGCTCATGATTTTGCTTTTAGATAATACTTTTTTTTTCATTCAAGAACTCCCTCACTAACCATATAATGCTTTGAAAAAAAATTGCCTTAAAAAAGTTGTGAATGAGGCATAAAGCATATCTGCTTAAGAGTTGAGATAAGAGTGAAAGAGAAAGTGGAAGTATTTTTTTCCTTAAATGACAGAAGTTGGGTGCTTTCCAATGGCAACCCCAAGTCTACTGCAAGCGATTGAGATCTGTCAACTTCTGTCTCCATTACAAATAAGCCACTGATTCAAAATGGAATGAGTCATTTACCAAGCTACTGGACCACCCAACACTTATTCTGCTAGAATATAACATAACTAAGAGTAATTTGGTGGAGATAGCATAACTCTAATCGAGATTATATCACAAACAAGATCGAGATTGTACATAATCTTTTTTCGAATCTTATGAATCTTATGTAATTATTTCAAATCTTTTGCAATTTATTTACTCCCATTTACATTTGAATGCATTGAGAGATCTGATCTTGCATGATGTTGTGGGTTGTTTAACAAGCTCTACATTTTCTGCTTTTATATGTAATATCAACTTCCAATATGAACTCAGAGTACACTGGTAATAGTAGATTCATTTTTCTTATTAATTAAATGAATTTTAAATGTTGGTTAGTTGATAGCTGTAAATTTGTAATCTCTATGTTTGCTAAGAAATGTACTCGCCTTTTCATTGACAGAATATCTAATTTTTGTAGTAGTGATTTTAATTTGAACCTTAGTAGTTGAGGATAAAGTTTTTGTTGAGGATAACACATGTGTTTGCGGTTCGTATCTTTTATTTTTTTCTTAGACAATTTTGATGATTAATATAACCTACAATTCTTGTATTTTGACTTGTTAAATACTTCATTTATGATTGTCCTTGTCTTTCTTAGGTACTTCCAAATATTGTCTTTTGTTAAATACTTGAGAGATAGTTGTTCTAATGGTTGACTAGAGGATTCCTCATAGTATGAATGTTAGTACGACATGTACATTCTCAACGTGCAACCCTTTCATATTATCGTTTTATATGTGTATGTGTTGAGATGATCAAACTACAAACTTTTAAAGATGAATTATTTTTCTTTTTTTGGCTAAAACTTGCTAAACGTTATTGTAGGTCATTGCTTCAAGAATTATTTAGTGAAACTTACTATGAGGCTTCATGAAGTATTAACACTCGAAAAGACGTAATTATCAAGAGTTGGAATATAATTTAATGTTTTAGAGTCTTATAGTTAGTAATTTTATTTATCATTGTAAATTGAGAGTAGTTTGTGAAGAGACATGAATAGTC

mRNA sequence

ATGCAGTTGAGCCCGAAAGAAATCAAAGAGATATATGGCACACGATATATTGGGGGAGACCAAGCTTCCGGGCTTGTTGGCCTAATGGATTTCTTTTGCTTCAGTGAGGTCATTGCTTCAAGAATTATTTAGTGAAACTTACTATGAGGCTTCATGAAGTATTAACACTCGAAAAGACGTAATTATCAAGAGTTGGAATATAATTTAATGTTTTAGAGTCTTATAGTTAGTAATTTTATTTATCATTGTAAATTGAGAGTAGTTTGTGAAGAGACATGAATAGTC

Coding sequence (CDS)

ATGCAGTTGAGCCCGAAAGAAATCAAAGAGATATATGGCACACGATATATTGGGGGAGACCAAGCTTCCGGGCTTGTTGGCCTAATGGATTTCTTTTGCTTCAGTGAGGTCATTGCTTCAAGAATTATTTAG

Protein sequence

MQLSPKEIKEIYGTRYIGGDQASGLVGLMDFFCFSEVIASRII
Homology
[Close]
BLAST of Cmc12g0326231 vs. NCBI nr
Match: XP_008443816.1 (PREDICTED: 5'-nucleotidase domain-containing protein DDB_G0275467 [Cucumis melo])

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-08
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 2   QLSPKEIKEIYGTRYIGGDQASGLVGLMDFFCFSE 37
           +LSPKEIKEIYGTR+IG DQA GLVGLMDFFCFSE
Sbjct: 253 KLSPKEIKEIYGTRHIGRDQAGGLVGLMDFFCFSE 287

[Close]
BLAST of Cmc12g0326231 vs. NCBI nr
Match: KAA0035119.1 (5'-nucleotidase domain-containing protein [Cucumis melo var. makuwa] >TYJ95960.1 5'-nucleotidase domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 1.5e-08
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 2   QLSPKEIKEIYGTRYIGGDQASGLVGLMDFFCFSE 37
           +LSPKEIKEIYGTR+IG DQA GLVGLMDFFCFSE
Sbjct: 195 KLSPKEIKEIYGTRHIGRDQARGLVGLMDFFCFSE 229

[Close]
BLAST of Cmc12g0326231 vs. NCBI nr
Match: XP_004146659.1 (5'-nucleotidase domain-containing protein DDB_G0275467 [Cucumis sativus] >KGN65260.1 hypothetical protein Csa_019920 [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 1.5e-08
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 2   QLSPKEIKEIYGTRYIGGDQASGLVGLMDFFCFSE 37
           +LSPKEIKEIYGTR+IG DQA GLVGLMDFFCFSE
Sbjct: 195 KLSPKEIKEIYGTRHIGRDQARGLVGLMDFFCFSE 229

[Close]
BLAST of Cmc12g0326231 vs. NCBI nr
Match: KAG7023420.1 (UDP-glucuronate 4-epimerase 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 66.6 bits (161), Expect = 5.9e-08
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 0 

Query: 2   QLSPKEIKEIYGTRYIGGDQASGLVGLMDFFCFSE 37
           +LSP EIKEIYGTR+IG DQA GLVGLMDFFCFSE
Sbjct: 625 KLSPSEIKEIYGTRHIGRDQARGLVGLMDFFCFSE 659

[Close]
BLAST of Cmc12g0326231 vs. NCBI nr
Match: KAG6589748.1 (UDP-glucuronate 4-epimerase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 66.6 bits (161), Expect = 5.9e-08
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 0 

Query: 2   QLSPKEIKEIYGTRYIGGDQASGLVGLMDFFCFSE 37
           +LSP EIKEIYGTR+IG DQA GLVGLMDFFCFSE
Sbjct: 677 KLSPSEIKEIYGTRHIGRDQARGLVGLMDFFCFSE 711

[Close]
BLAST of Cmc12g0326231 vs. ExPASy TrEMBL
Match: A0A1S3B8W5 (5'-nucleotidase domain-containing protein DDB_G0275467 OS=Cucumis melo OX=3656 GN=LOC103487320 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.7e-09
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 2   QLSPKEIKEIYGTRYIGGDQASGLVGLMDFFCFSE 37
           +LSPKEIKEIYGTR+IG DQA GLVGLMDFFCFSE
Sbjct: 253 KLSPKEIKEIYGTRHIGRDQAGGLVGLMDFFCFSE 287

[Close]
BLAST of Cmc12g0326231 vs. ExPASy TrEMBL
Match: A0A5A7T188 (5'-nucleotidase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00280 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.5e-09
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 2   QLSPKEIKEIYGTRYIGGDQASGLVGLMDFFCFSE 37
           +LSPKEIKEIYGTR+IG DQA GLVGLMDFFCFSE
Sbjct: 195 KLSPKEIKEIYGTRHIGRDQARGLVGLMDFFCFSE 229

[Close]
BLAST of Cmc12g0326231 vs. ExPASy TrEMBL
Match: A0A0A0LTK5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G277470 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.5e-09
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 2   QLSPKEIKEIYGTRYIGGDQASGLVGLMDFFCFSE 37
           +LSPKEIKEIYGTR+IG DQA GLVGLMDFFCFSE
Sbjct: 195 KLSPKEIKEIYGTRHIGRDQARGLVGLMDFFCFSE 229

[Close]
BLAST of Cmc12g0326231 vs. ExPASy TrEMBL
Match: A0A6J1JHK0 (LOW QUALITY PROTEIN: 5'-nucleotidase domain-containing protein DDB_G0275467 OS=Cucurbita maxima OX=3661 GN=LOC111485769 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.8e-08
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 0 

Query: 2   QLSPKEIKEIYGTRYIGGDQASGLVGLMDFFCFSE 37
           +LSP EIKEIYGTR+IG DQA GLVGLMDFFCFSE
Sbjct: 195 KLSPNEIKEIYGTRHIGRDQARGLVGLMDFFCFSE 229

[Close]
BLAST of Cmc12g0326231 vs. ExPASy TrEMBL
Match: A0A6J1E706 (5'-nucleotidase domain-containing protein DDB_G0275467 OS=Cucurbita moschata OX=3662 GN=LOC111430007 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.8e-08
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 0 

Query: 2   QLSPKEIKEIYGTRYIGGDQASGLVGLMDFFCFSE 37
           +LSP EIKEIYGTR+IG DQA GLVGLMDFFCFSE
Sbjct: 195 KLSPSEIKEIYGTRHIGRDQARGLVGLMDFFCFSE 229

[Close]
BLAST of Cmc12g0326231 vs. TAIR 10
Match: AT2G23890.1 (HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase )

HSP 1 Score: 60.5 bits (145), Expect = 3.9e-10
Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 2   QLSPKEIKEIYGTRYIGGDQASGLVGLMDFFCFSE 37
           +LS KEI+ +YGTR+IG DQA GLVGLMDFFCFSE
Sbjct: 193 KLSRKEIESMYGTRHIGRDQARGLVGLMDFFCFSE 227

The following BLAST results are available for this feature:
BLAST of Cmc12g0326231 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008443816.11.2e-0888.57PREDICTED: 5'-nucleotidase domain-containing protein DDB_G0275467 [Cucumis melo][more]
KAA0035119.11.5e-0888.575'-nucleotidase domain-containing protein [Cucumis melo var. makuwa] >TYJ95960.1... [more]
XP_004146659.11.5e-0888.575'-nucleotidase domain-containing protein DDB_G0275467 [Cucumis sativus] >KGN652... [more]
KAG7023420.15.9e-0885.71UDP-glucuronate 4-epimerase 1, partial [Cucurbita argyrosperma subsp. argyrosper... [more]
KAG6589748.15.9e-0885.71UDP-glucuronate 4-epimerase 1, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Cmc12g0326231 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc12g0326231 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B8W55.7e-0988.575'-nucleotidase domain-containing protein DDB_G0275467 OS=Cucumis melo OX=3656 G... [more]
A0A5A7T1887.5e-0988.575'-nucleotidase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A0A0LTK57.5e-0988.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G277470 PE=3 SV=1[more]
A0A6J1JHK02.8e-0885.71LOW QUALITY PROTEIN: 5'-nucleotidase domain-containing protein DDB_G0275467 OS=C... [more]
A0A6J1E7062.8e-0885.715'-nucleotidase domain-containing protein DDB_G0275467 OS=Cucurbita moschata OX=... [more]
BLAST of Cmc12g0326231 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G23890.13.9e-1077.14HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0326231.1Cmc12g0326231.1mRNA