Cmc12g0325481 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0325481
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	agamous-like MADS-box protein AGL80
Location	CMiso1.1chr12: 15638417 .. 15639076 (+)
RNA-Seq Expression	Cmc12g0325481
Synteny	Cmc12g0325481

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAGAAAGAAGGTGAAACTTGCATACATTACAAATGATGCATCAAGAAAAGCCACATTCAAGAAAAGGAAAAAGGGTTTATTGAAGAAGCTGGCTGAGCTTACCACTCTATGTGGGATTGAGGCATGTGCCATAATCTTCAATCCCTCCAATTCACAACCTGACCTTTGGCCCTCCACCTTAGGCCTCCAAAAGGTTCTCTCTAAGTTCAAAAGTCTACCAGAGATGGAGCAATGCAAGAAGATGGTCAACCAAGAGACGTTCCTTCGTGATCGTATCGCGAAAGCTGCTGACCAACTCAAGAAGCTACAAAGGGAGAATCGTGAGAAGGAGATCACTCGACTCATGTTTCAAAGTCTCGTTGCTGGAGCAACCCCACCTCCAGATCTCAATGTCATCGATTTGAATGACCTTGGTTGGCTAGTTGATCAAAAAATGGCTGATATTGGTAAGAGAATGGAATCACTTACAGTAAACCGATCGTCGTCACATGTGGCGACAAATGAGCCGTCGTGGTTTATGGAGATGGTGAATCAAGGAGGTAATGATGAAGATCATATGGGATTCAATATTGGGGATGATGTGATTCAACTTCCTAGCTTTGGGGAGTATGATAATCATGGTACTTTTTGGTCAAATAATGTCATTTTCCCTTGA

mRNA sequence

ATGACAAGAAAGAAGGTGAAACTTGCATACATTACAAATGATGCATCAAGAAAAGCCACATTCAAGAAAAGGAAAAAGGGTTTATTGAAGAAGCTGGCTGAGCTTACCACTCTATGTGGGATTGAGGCATGTGCCATAATCTTCAATCCCTCCAATTCACAACCTGACCTTTGGCCCTCCACCTTAGGCCTCCAAAAGGTTCTCTCTAAGTTCAAAAGTCTACCAGAGATGGAGCAATGCAAGAAGATGGTCAACCAAGAGACGTTCCTTCGTGATCGTATCGCGAAAGCTGCTGACCAACTCAAGAAGCTACAAAGGGAGAATCGTGAGAAGGAGATCACTCGACTCATGTTTCAAAGTCTCGTTGCTGGAGCAACCCCACCTCCAGATCTCAATGTCATCGATTTGAATGACCTTGGTTGGCTAGTTGATCAAAAAATGGCTGATATTGGTAAGAGAATGGAATCACTTACAGTAAACCGATCGTCGTCACATGTGGCGACAAATGAGCCGTCGTGGTTTATGGAGATGGTGAATCAAGGAGGTAATGATGAAGATCATATGGGATTCAATATTGGGGATGATGTGATTCAACTTCCTAGCTTTGGGGAGTATGATAATCATGGTACTTTTTGGTCAAATAATGTCATTTTCCCTTGA

Coding sequence (CDS)

ATGACAAGAAAGAAGGTGAAACTTGCATACATTACAAATGATGCATCAAGAAAAGCCACATTCAAGAAAAGGAAAAAGGGTTTATTGAAGAAGCTGGCTGAGCTTACCACTCTATGTGGGATTGAGGCATGTGCCATAATCTTCAATCCCTCCAATTCACAACCTGACCTTTGGCCCTCCACCTTAGGCCTCCAAAAGGTTCTCTCTAAGTTCAAAAGTCTACCAGAGATGGAGCAATGCAAGAAGATGGTCAACCAAGAGACGTTCCTTCGTGATCGTATCGCGAAAGCTGCTGACCAACTCAAGAAGCTACAAAGGGAGAATCGTGAGAAGGAGATCACTCGACTCATGTTTCAAAGTCTCGTTGCTGGAGCAACCCCACCTCCAGATCTCAATGTCATCGATTTGAATGACCTTGGTTGGCTAGTTGATCAAAAAATGGCTGATATTGGTAAGAGAATGGAATCACTTACAGTAAACCGATCGTCGTCACATGTGGCGACAAATGAGCCGTCGTGGTTTATGGAGATGGTGAATCAAGGAGGTAATGATGAAGATCATATGGGATTCAATATTGGGGATGATGTGATTCAACTTCCTAGCTTTGGGGAGTATGATAATCATGGTACTTTTTGGTCAAATAATGTCATTTTCCCTTGA

Protein sequence

MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPSTLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQSLVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQGGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNNVIFP

Homology

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BLAST of Cmc12g0325481 vs. NCBI nr
Match: XP_008458956.1 (PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo] >KAA0054322.1 agamous-like MADS-box protein AGL80 [Cucumis melo var. makuwa] >TYK12358.1 agamous-like MADS-box protein AGL80 [Cucumis melo var. makuwa])

HSP 1 Score: 440.7 bits (1132), Expect = 7.6e-120
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120
           TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120

Query: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQ 180
           LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQ
Sbjct: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQ 180

Query: 181 GGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNNVIFP 220
           GGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNNVIFP
Sbjct: 181 GGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNNVIFP 219

[Close]

BLAST of Cmc12g0325481 vs. NCBI nr
Match: XP_004139619.1 (agamous-like MADS-box protein AGL80 [Cucumis sativus])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 212/220 (96.36%), Postives = 213/220 (96.82%), Query Frame = 0


Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120
           TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITR+MFQS
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120

Query: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQ 180
           LVAGATPP DLNVIDLNDLGWLVDQKMADIGKRME LTVNR SS VATNEPSWFMEMVNQ
Sbjct: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNR-SSRVATNEPSWFMEMVNQ 180

Query: 181 GGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWS-NNVIFP 220
           G NDEDHMGFNIGDDVIQLPSFGE DNHGTFWS NNVIFP
Sbjct: 181 GANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNNNVIFP 219

[Close]

BLAST of Cmc12g0325481 vs. NCBI nr
Match: KAE8652877.1 (hypothetical protein Csa_013025 [Cucumis sativus])

HSP 1 Score: 392.5 bits (1007), Expect = 2.4e-105
Identity = 201/208 (96.63%), Postives = 202/208 (97.12%), Query Frame = 0


Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120
           TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITR+MFQS
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120

Query: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQ 180
           LVAGATPP DLNVIDLNDLGWLVDQKMADIGKRME LTVNR SS VATNEPSWFMEMVNQ
Sbjct: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNR-SSRVATNEPSWFMEMVNQ 180

Query: 181 GGNDEDHMGFNIGDDVIQLPSFGEYDNH 209
           G NDEDHMGFNIGDDVIQLPSFGE DNH
Sbjct: 181 GANDEDHMGFNIGDDVIQLPSFGEDDNH 207

[Close]

BLAST of Cmc12g0325481 vs. NCBI nr
Match: XP_038895832.1 (agamous-like MADS-box protein AGL80 [Benincasa hispida])

HSP 1 Score: 370.2 bits (949), Expect = 1.3e-98
Identity = 185/219 (84.47%), Postives = 196/219 (89.50%), Query Frame = 0


Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYITND +RKATF KRKKGLLKKL ELTTLCGIEACAIIFNP NSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDTARKATFNKRKKGLLKKLNELTTLCGIEACAIIFNPFNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120
            LGLQ+VLSKFKSLPEMEQCKKMVNQET+L DRIAKA DQLKKLQRENREKEI RLMFQS
Sbjct: 61  ALGLQRVLSKFKSLPEMEQCKKMVNQETYLCDRIAKATDQLKKLQRENREKEIARLMFQS 120

Query: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQ 180
           L AG TPPPDLNVIDLNDLGWLVDQK+AD+GKRME L VN+ S   AT EPSWFMEM+++
Sbjct: 121 LAAGGTPPPDLNVIDLNDLGWLVDQKVADVGKRMELLRVNQ-SMRAATREPSWFMEMMSR 180

Query: 181 GGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNNVIFP 220
           G +DED M FNIGDDVIQLPSFGE DNHG FWSNN +FP
Sbjct: 181 GVDDEDQMKFNIGDDVIQLPSFGEDDNHGAFWSNNTLFP 218

[Close]

BLAST of Cmc12g0325481 vs. NCBI nr
Match: XP_038895833.1 (agamous-like MADS-box protein AGL80 [Benincasa hispida])

HSP 1 Score: 328.2 bits (840), Expect = 5.5e-86
Identity = 166/202 (82.18%), Postives = 179/202 (88.61%), Query Frame = 0


Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYITND +RKAT K+RKK LLKKL ELT LCGIEACAIIFNP NSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDTARKATLKERKKSLLKKLNELTALCGIEACAIIFNPFNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120
            LGLQ+VLSKFKSLPEMEQCKKMVNQET++ DRI+KA DQLKKLQRENREK I RLMFQS
Sbjct: 61  ILGLQRVLSKFKSLPEMEQCKKMVNQETYICDRISKAVDQLKKLQRENREKVIARLMFQS 120

Query: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQ 180
           LVAGATPPPDL +IDLNDLGWLVDQK+ D+GKRME L VN+ S  VAT EPSWFMEMV++
Sbjct: 121 LVAGATPPPDLTIIDLNDLGWLVDQKVVDVGKRMELLKVNQ-SMRVATMEPSWFMEMVSR 180

Query: 181 GGNDEDHMGFNIGDDVIQLPSF 203
           G  DED MGFNIGDDVIQ+P F
Sbjct: 181 GAVDEDQMGFNIGDDVIQIPRF 201

[Close]

BLAST of Cmc12g0325481 vs. ExPASy Swiss-Prot
Match: Q9FJK3 (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 8.9e-47
Identity = 91/157 (57.96%), Postives = 131/157 (83.44%), Query Frame = 0


Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYI+ND+SRKATFKKRKKGL+KK+ EL+TLCGI ACAII++P ++ P++WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120
             G+Q+V+S+F++LPEM+Q KKMV+QE FL+ RIAKA + L++ ++++RE E+T +MFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESL 158
           L+ G      LN++DLNDLG++++Q + D+ +R+E L
Sbjct: 121 LI-GNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEIL 156

[Close]

BLAST of Cmc12g0325481 vs. ExPASy Swiss-Prot
Match: Q7XJK8 (MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.9e-34
Identity = 78/162 (48.15%), Postives = 109/162 (67.28%), Query Frame = 0


Query: 3   RKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPSTL 62
           ++K+KL+ I N  SRK TF KRKKG+ KKL EL TLCG+EACA++++P NS P+ WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQSLV 122
           G++ V+SKF  L  +++ KKMV+QETF+  RIAK  +QL+KL+ EN   +I  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCL- 121

Query: 123 AGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSS 165
            G T   +L+  DL DL   +D+ +  + +R+E L  N  SS
Sbjct: 122 KGETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIENGESS 162

[Close]

BLAST of Cmc12g0325481 vs. ExPASy Swiss-Prot
Match: O80805 (MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.8e-31
Identity = 77/162 (47.53%), Postives = 108/162 (66.67%), Query Frame = 0


Query: 3   RKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPSTL 62
           R K+KL++I ND+ RK TF KRKKG+LKK  EL TLCG++ACA+I +P NS  + WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQSLV 122
           G+++V+SKF     +++ KKMV+QETFLR RIAK  ++L+KL+ ENR  +I  LMF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCL- 121

Query: 123 AGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSS 165
            G      L+  DL DL   +++ +  + +R+E L  N  SS
Sbjct: 122 KGEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGESS 162

[Close]

BLAST of Cmc12g0325481 vs. ExPASy Swiss-Prot
Match: Q7XJK6 (Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.6e-30
Identity = 72/160 (45.00%), Postives = 101/160 (63.12%), Query Frame = 0


Query: 4   KKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPSTLG 63
           KKVKL+ I N+ SRK +F KRK G+ KKL EL+TLCG++ACA+I++P    P+ WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  LQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQSLVA 123
            +KV S+F  +P   + KKM++QET+L +RI KA +QLK L  ENRE ++ R MF   V 
Sbjct: 62  AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQVRRFMF-DCVE 121

Query: 124 GATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSS 164
           G       +  DL DL   ++  +  +  R+ES+  N  S
Sbjct: 122 GKMSQYHYDAKDLQDLQSCINLYLDQLNGRIESIKENGES 160

[Close]

BLAST of Cmc12g0325481 vs. ExPASy Swiss-Prot
Match: Q7XJK5 (Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=1 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 2.9e-29
Identity = 72/160 (45.00%), Postives = 100/160 (62.50%), Query Frame = 0


Query: 4   KKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPSTLG 63
           KKVKL+ I N+ SRK +F KRK G+ KKL EL+TLCG++ACA+I++P    P+ WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  LQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQSLVA 123
            +KV SKF  +P   + +KM++QET L +RI KA +QLK L  ENRE ++ R MF   V 
Sbjct: 62  AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQVRRFMF-DCVE 121

Query: 124 GATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSS 164
           G       +  DL DL   ++  +  +  R+ES+  N  S
Sbjct: 122 GKMSQYRYDAKDLQDLLSCMNLYLDQLNGRIESIKENGES 160

[Close]

BLAST of Cmc12g0325481 vs. ExPASy TrEMBL
Match: A0A5A7UEU7 (Agamous-like MADS-box protein AGL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001350 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 3.7e-120
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120
           TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120

Query: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQ 180
           LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQ
Sbjct: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQ 180

Query: 181 GGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNNVIFP 220
           GGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNNVIFP
Sbjct: 181 GGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNNVIFP 219

[Close]

BLAST of Cmc12g0325481 vs. ExPASy TrEMBL
Match: A0A1S3C968 (agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103498216 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 3.7e-120
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120
           TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120

Query: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQ 180
           LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQ
Sbjct: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQ 180

Query: 181 GGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNNVIFP 220
           GGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNNVIFP
Sbjct: 181 GGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNNVIFP 219

[Close]

BLAST of Cmc12g0325481 vs. ExPASy TrEMBL
Match: A0A0A0LVU5 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G191680 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.3e-112
Identity = 212/220 (96.36%), Postives = 213/220 (96.82%), Query Frame = 0


Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120
           TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITR+MFQS
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120

Query: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQ 180
           LVAGATPP DLNVIDLNDLGWLVDQKMADIGKRME LTVNR SS VATNEPSWFMEMVNQ
Sbjct: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNR-SSRVATNEPSWFMEMVNQ 180

Query: 181 GGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWS-NNVIFP 220
           G NDEDHMGFNIGDDVIQLPSFGE DNHGTFWS NNVIFP
Sbjct: 181 GANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNNNVIFP 219

[Close]

BLAST of Cmc12g0325481 vs. ExPASy TrEMBL
Match: A0A6J1EG77 (agamous-like MADS-box protein AGL80 OS=Cucurbita moschata OX=3662 GN=LOC111434044 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.1e-82
Identity = 163/216 (75.46%), Postives = 180/216 (83.33%), Query Frame = 0


Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKL YITNDA+RKATFKKRKKGL+KKL ELTTLCGIEACAIIF+P NSQPDLWPS
Sbjct: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120
            +GL++VL+KFKSL EMEQC KMVNQETFLRDRIAKA DQLKKLQRENREKEITRLMF+S
Sbjct: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120

Query: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATN-EPSWFMEMVN 180
           LVAGATPP DLN+IDL DL W VD+ M D+ KR+E LT   +   V +  EPSWFMEM++
Sbjct: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAVEPSWFMEMMS 180

Query: 181 QGGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNN 216
            G  D D MGF I DDVIQLP+    DNHG FWSNN
Sbjct: 181 HGAYD-DQMGFKIWDDVIQLPN---DDNHGAFWSNN 212

[Close]

BLAST of Cmc12g0325481 vs. ExPASy TrEMBL
Match: A0A6J1KLQ8 (agamous-like MADS-box protein AGL80 OS=Cucurbita maxima OX=3661 GN=LOC111495707 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.6e-81
Identity = 162/216 (75.00%), Postives = 179/216 (82.87%), Query Frame = 0


Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKL YITNDA+RKATFKKRKKGL+KKL ELTTLCGIEACAIIF+P NSQPDLWPS
Sbjct: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120
            +GL++VL+KFKSL EMEQC KMVNQETFLRDRIAKA DQLKKLQRE REKEITRLMF+S
Sbjct: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120

Query: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATN-EPSWFMEMVN 180
           LVAGATPP DLN+IDL DL WLVD+ M D+ KR+E LT   +   V +  EPSWFMEM++
Sbjct: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS 180

Query: 181 QGGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNN 216
               D D MGF I DDVIQLP+    DNHG FWSNN
Sbjct: 181 HEAYD-DQMGFKIWDDVIQLPN---DDNHGAFWSNN 212

[Close]

BLAST of Cmc12g0325481 vs. TAIR 10
Match: AT5G48670.1 (AGAMOUS-like 80 )

HSP 1 Score: 188.3 bits (477), Expect = 6.3e-48
Identity = 91/157 (57.96%), Postives = 131/157 (83.44%), Query Frame = 0


Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYI+ND+SRKATFKKRKKGL+KK+ EL+TLCGI ACAII++P ++ P++WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120
             G+Q+V+S+F++LPEM+Q KKMV+QE FL+ RIAKA + L++ ++++RE E+T +MFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESL 158
           L+ G      LN++DLNDLG++++Q + D+ +R+E L
Sbjct: 121 LI-GNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEIL 156

[Close]

BLAST of Cmc12g0325481 vs. TAIR 10
Match: AT5G26630.1 (MADS-box transcription factor family protein )

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-35
Identity = 79/187 (42.25%), Postives = 120/187 (64.17%), Query Frame = 0


Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTR+KVK+ +I N+ +RK+TFKKRKKGLLKK  EL  LCG+   A++ +P    P++WPS
Sbjct: 1   MTRQKVKMTFIENETARKSTFKKRKKGLLKKAQELGILCGVPIFAVVNSPYELNPEVWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120
                +V+S++K++  M++ KKMVNQETFL+ RI KA +  KKL++EN+E E+  +MF  
Sbjct: 61  REAANQVVSQWKTMSVMDKTKKMVNQETFLQQRITKATESWKKLRKENKELEMKNIMFDC 120

Query: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSH----VATNEPSWFME 180
           L +G T    +   +L D G++++Q++ D+ +R+E L  N   S     VA    S  M 
Sbjct: 121 L-SGKTLVSSIEKTELRDFGYVIEQQLKDVNRRIEILKRNNEPSSALVPVAAPTTSSVMP 180

Query: 181 MVNQGGN 184
           +V  G +
Sbjct: 181 VVEMGSS 186

[Close]

BLAST of Cmc12g0325481 vs. TAIR 10
Match: AT1G65300.1 (AGAMOUS-like 38 )

HSP 1 Score: 146.4 bits (368), Expect = 2.8e-35
Identity = 78/162 (48.15%), Postives = 109/162 (67.28%), Query Frame = 0


Query: 3   RKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPSTL 62
           ++K+KL+ I N  SRK TF KRKKG+ KKL EL TLCG+EACA++++P NS P+ WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQSLV 122
           G++ V+SKF  L  +++ KKMV+QETF+  RIAK  +QL+KL+ EN   +I  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCL- 121

Query: 123 AGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSS 165
            G T   +L+  DL DL   +D+ +  + +R+E L  N  SS
Sbjct: 122 KGETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIENGESS 162

[Close]

BLAST of Cmc12g0325481 vs. TAIR 10
Match: AT1G65330.1 (MADS-box transcription factor family protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-32
Identity = 77/162 (47.53%), Postives = 108/162 (66.67%), Query Frame = 0


Query: 3   RKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPSTL 62
           R K+KL++I ND+ RK TF KRKKG+LKK  EL TLCG++ACA+I +P NS  + WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQSLV 122
           G+++V+SKF     +++ KKMV+QETFLR RIAK  ++L+KL+ ENR  +I  LMF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCL- 121

Query: 123 AGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSS 165
            G      L+  DL DL   +++ +  + +R+E L  N  SS
Sbjct: 122 KGEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGESS 162

[Close]

BLAST of Cmc12g0325481 vs. TAIR 10
Match: AT3G05860.1 (MADS-box transcription factor family protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.4e-31
Identity = 74/172 (43.02%), Postives = 112/172 (65.12%), Query Frame = 0


Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKK+ L+YITN++ RKATF KRKKGL+KK+ EL+ LCGIEACA+I++P NS P++WPS
Sbjct: 1   MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120
              ++ V+  F+ L ++EQ KKMV+ E F+R  I+K  +   K   +N E+ +   MFQ 
Sbjct: 61  NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMFQ- 120

Query: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPS 173
           L++G     +L   +  DL   +DQ + ++    ++ T+N+  SH+   E S
Sbjct: 121 LLSGKGEKLNLTDRNREDLCKYIDQYLKEL-YHHKNKTINQ--SHIEPGESS 168

The following BLAST results are available for this feature:

BLAST of Cmc12g0325481 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458956.1	7.6e-120	100.00	PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo] >KAA0054322.1 agam...	[more]
XP_004139619.1	1.3e-111	96.36	agamous-like MADS-box protein AGL80 [Cucumis sativus]	[more]
KAE8652877.1	2.4e-105	96.63	hypothetical protein Csa_013025 [Cucumis sativus]	[more]
XP_038895832.1	1.3e-98	84.47	agamous-like MADS-box protein AGL80 [Benincasa hispida]	[more]
XP_038895833.1	5.5e-86	82.18	agamous-like MADS-box protein AGL80 [Benincasa hispida]	[more]

BLAST of Cmc12g0325481 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJK3	8.9e-47	57.96	Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=...	[more]
Q7XJK8	3.9e-34	48.15	MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 P...	[more]
O80805	1.8e-31	47.53	MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 P...	[more]
Q7XJK6	7.6e-30	45.00	Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=...	[more]
Q7XJK5	2.9e-29	45.00	Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=...	[more]

BLAST of Cmc12g0325481 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UEU7	3.7e-120	100.00	Agamous-like MADS-box protein AGL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3C968	3.7e-120	100.00	agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103498216 PE=4...	[more]
A0A0A0LVU5	6.3e-112	96.36	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G191680 PE...	[more]
A0A6J1EG77	3.1e-82	75.46	agamous-like MADS-box protein AGL80 OS=Cucurbita moschata OX=3662 GN=LOC11143404...	[more]
A0A6J1KLQ8	2.6e-81	75.00	agamous-like MADS-box protein AGL80 OS=Cucurbita maxima OX=3661 GN=LOC111495707 ...	[more]

BLAST of Cmc12g0325481 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48670.1	6.3e-48	57.96	AGAMOUS-like 80	[more]
AT5G26630.1	1.2e-35	42.25	MADS-box transcription factor family protein	[more]
AT1G65300.1	2.8e-35	48.15	AGAMOUS-like 38	[more]
AT1G65330.1	1.3e-32	47.53	MADS-box transcription factor family protein	[more]
AT3G05860.1	2.4e-31	43.02	MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..114
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..167
None	No IPR available	PANTHER	PTHR48019:SF17	AGAMOUS-LIKE MADS-BOX PROTEIN AGL80	coord: 1..167
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 38..59 score: 24.94 coord: 3..23 score: 40.11 coord: 23..38 score: 60.12
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 7.7E-24 score: 95.2
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 11..52 e-value: 2.2E-17 score: 62.3
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..52 score: 17.605024
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..97 e-value: 3.0E-18 score: 67.7
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..95
IPR033897	MADS SRF-like	CDD	cd00266	MADS_SRF_like	coord: 2..85 e-value: 9.98207E-22 score: 83.4635

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0325481.1	Cmc12g0325481.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
molecular_function	GO:0000987	cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003677	DNA binding