Cmc12g0324811 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0324811
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionAminotransferase class I and II
LocationCMiso1.1chr12: 14697948 .. 14698802 (+)
RNA-Seq ExpressionCmc12g0324811
SyntenyCmc12g0324811
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGACTCCTGACAACGTGTCTGCCATCACTCCAAATCAAAGCGCCGTAACCTACCCGATCCTTTGGCACAACTCCAGCGAGCGTCAATTCAAAGCTCTTCTCTTCTCCAACTCTCTCAAACTTCAAAAATCTGGGCTTCACAGAAACCACAACTCCGTTGGGGTGGAGAATTTGGGCTCTATAAACTCCCGGACTGCCAACGTTCTTCAGTTTTCTAGTGACACTCACACTACCTTTCAAATTTTGAACCCCAATGGAAGGGTAATTAAGGTTCAAAACAGACGAAGCAGGAGGACATTTGAAAGGTTCATCAGAGAATGCACGAATGGTCTTCTCGTCGTAGCCGCTGGCGCAGAGGAATTCCAAGTAGTCGTTGGGGGAGAGGTCGTAGACAAGGCCGGGGTCAATGGCTCCAGTAGGGTTGATGTGGCCGGAGCCATATGCAAATGGAGTGGCAGGGGCGAGGTCAAGAGATCCCCCATCGATCATGGGGTTCAATGTGTTGTCACGAACTTGGGAGGAGGTCATGATGGCAGATTTAATGGCAGAGGGGCTCCAATCCGGGTGGAGATTTCGGAGAAGGCCGACGAGGCCAGCGACGTGGGGGCAAGACATGGAGGTACCTGACATTGTAATGAATGGAGTTGTTCTGTTGTCAGATGCATCGCGTGTTGGACTTATAGCTTCTGAAAATGCCGCAATTATGTTTACTCCTGGAGCGGTCACATCAGGCTGCAAAGAAGTACTTTTATTCAAATCACAACAAATATAACACTCATTAACACTCAATAAGACTACATTTTGGCTGATAGTGGCAAACTTTTGTTTTTTTATTTAATGTAGAGGCTCAACAC

mRNA sequence

TGGGACTCCTGACAACGTGTCTGCCATCACTCCAAATCAAAGCGCCGTAACCTACCCGATCCTTTGGCACAACTCCAGCGAGCGTCAATTCAAAGCTCTTCTCTTCTCCAACTCTCTCAAACTTCAAAAATCTGGGCTTCACAGAAACCACAACTCCGTTGGGGTGGAGAATTTGGGCTCTATAAACTCCCGGACTGCCAACGTTCTTCAGTTTTCTAGTGACACTCACACTACCTTTCAAATTTTGAACCCCAATGGAAGGGTAATTAAGGTTCAAAACAGACGAAGCAGGAGGACATTTGAAAGGTTCATCAGAGAATGCACGAATGGTCTTCTCGTCGTAGCCGCTGGCGCAGAGGAATTCCAAGTAGTCGTTGGGGGAGAGGTCGTAGACAAGGCCGGGGTCAATGGCTCCAGTAGGGTTGATGTGGCCGGAGCCATATGCAAATGGAGTGGCAGGGGCGAGGTCAAGAGATCCCCCATCGATCATGGGGTTCAATGTGTTGTCACGAACTTGGGAGGAGGTCATGATGGCAGATTTAATGGCAGAGGGGCTCCAATCCGGGTGGAGATTTCGGAGAAGGCCGACGAGGCCAGCGACGTGGGGGCAAGACATGGAGGTACCTGACATTGTAATGAATGGAGTTGTTCTGTTGTCAGATGCATCGCGTGTTGGACTTATAGCTTCTGAAAATGCCGCAATTATGTTTACTCCTGGAGCGGTCACATCAGGCTGCAAAGAAGTACTTTTATTCAAATCACAACAAATATAACACTCATTAACACTCAATAAGACTACATTTTGGCTGATAGTGGCAAACTTTTGTTTTTTTATTTAATGTAGAGGCTCAACAC

Coding sequence (CDS)

ATGGCTCCAGTAGGGTTGATGTGGCCGGAGCCATATGCAAATGGAGTGGCAGGGGCGAGGTCAAGAGATCCCCCATCGATCATGGGGTTCAATGTGTTGTCACGAACTTGGGAGGAGGTCATGATGGCAGATTTAATGGCAGAGGGGCTCCAATCCGGGTGGAGATTTCGGAGAAGGCCGACGAGGCCAGCGACGTGGGGGCAAGACATGGAGGTACCTGACATTGTAATGAATGGAGTTGTTCTGTTGTCAGATGCATCGCGTGTTGGACTTATAGCTTCTGAAAATGCCGCAATTATGTTTACTCCTGGAGCGGTCACATCAGGCTGCAAAGAAGTACTTTTATTCAAATCACAACAAATATAA

Protein sequence

MAPVGLMWPEPYANGVAGARSRDPPSIMGFNVLSRTWEEVMMADLMAEGLQSGWRFRRRPTRPATWGQDMEVPDIVMNGVVLLSDASRVGLIASENAAIMFTPGAVTSGCKEVLLFKSQQI
Homology
BLAST of Cmc12g0324811 vs. NCBI nr
Match: PON57783.1 (hypothetical protein PanWU01x14_171450 [Parasponia andersonii])

HSP 1 Score: 82.8 bits (203), Expect = 2.2e-12
Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 0

Query: 28  MGFNVLSRTWEEVMMADLMAEGLQSGWRFRRRPTRPATWGQDMEVPDIVMNGVVLLSDAS 87
           MG+  LS     V+MADLMA GLQSGW    R   P TWGQ ++VPD ++N V  +S+++
Sbjct: 1   MGWFRLSTVLAVVIMADLMAAGLQSGWADLSRAAAPPTWGQAIDVPDRMLNSVFRVSESN 60

Query: 88  RVGLIASENAAIMFTPGAVTSGCK 112
            VG IAS +AA M TPGA+ SG +
Sbjct: 61  PVGPIASVHAARMLTPGAIKSGLR 84

BLAST of Cmc12g0324811 vs. NCBI nr
Match: PON90003.1 (hypothetical protein TorRG33x02_142890 [Trema orientale])

HSP 1 Score: 80.9 bits (198), Expect = 8.5e-12
Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 0

Query: 28  MGFNVLSRTWEEVMMADLMAEGLQSGWRFRRRPTRPATWGQDMEVPDIVMNGVVLLSDAS 87
           MG+  LS     V+MADLMA GLQSGW    R   P TWGQ ++VPD ++N V  +S+++
Sbjct: 1   MGWFRLSTVLAVVIMADLMAAGLQSGWADLSRAAAPLTWGQAIDVPDRMLNSVFRVSESN 60

Query: 88  RVGLIASENAAIMFTPGAVTSGCK 112
            VG  AS +AA M TPGA+ SG +
Sbjct: 61  PVGPTASVHAARMLTPGAIKSGLR 84

BLAST of Cmc12g0324811 vs. NCBI nr
Match: KAB8096564.1 (hypothetical protein EE612_025061 [Oryza sativa] >KAB8096565.1 hypothetical protein EE612_025061 [Oryza sativa] >BAS90591.1 Os04g0573200 [Oryza sativa Japonica Group])

HSP 1 Score: 74.3 bits (181), Expect = 7.9e-10
Identity = 47/105 (44.76%), Postives = 58/105 (55.24%), Query Frame = 0

Query: 7   MWPEPYANGVAGARSRDPPSIMGFNVLSRTWEEVMMADLMAEGLQSGWRFRRRPTRPATW 66
           M P P +NGV         S +G  VLS T+  V+ ADL+  GLQSGW        PAT 
Sbjct: 1   MCPAPCSNGVDALPV--AASFIGRYVLSCTYAVVISADLICAGLQSGWLALISAATPATC 60

Query: 67  GQDMEVPDIVMNGVVLLSDASRVGLIASENAAIMFTPGAVTSGCK 112
           G DM+VPD ++N    LS     GL +  +AA MFTPGA TSG +
Sbjct: 61  GHDMDVPDRMLNPTRRLSLDKLDGLASPLHAAKMFTPGATTSGLR 103

BLAST of Cmc12g0324811 vs. NCBI nr
Match: RWR95882.1 (hypothetical protein CKAN_02524200 [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-09
Identity = 38/70 (54.29%), Postives = 45/70 (64.29%), Query Frame = 0

Query: 42  MADLMAEGLQSGWRFRRRPTRPATWGQDMEVPDIVMNGVVLLSDASRVGLIASENAAIMF 101
           MADL A GL+ GW FR R   P T GQ +EVPD ++N   LLS +S VGL+A    A MF
Sbjct: 1   MADLRAAGLKLGWAFRSRAATPLTCGQAIEVPDSMLNSTRLLSKSSPVGLLAPVQLAKMF 60

Query: 102 TPGAVTSGCK 112
            PGA TSG +
Sbjct: 61  APGATTSGLR 70

BLAST of Cmc12g0324811 vs. NCBI nr
Match: GER33831.1 (protein kinase 2B [Striga asiatica])

HSP 1 Score: 72.4 bits (176), Expect = 3.0e-09
Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 42  MADLMAEGLQSGWRFRRRPTRPATWGQDMEVPDIVMNGVVLLSDASRVGLIASENAAIMF 101
           MADL+A GLQSG   RRRP  P TWGQDMEVPDI++ GV   S +  +G  AS N AIM 
Sbjct: 1   MADLIAAGLQSGCNERRRPATPETWGQDMEVPDIMLKGVFRWSKSKSLGFAASLNEAIMI 60

Query: 102 T 103
           +
Sbjct: 61  S 61

BLAST of Cmc12g0324811 vs. ExPASy TrEMBL
Match: A0A2P5C9S8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_171450 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12
Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 0

Query: 28  MGFNVLSRTWEEVMMADLMAEGLQSGWRFRRRPTRPATWGQDMEVPDIVMNGVVLLSDAS 87
           MG+  LS     V+MADLMA GLQSGW    R   P TWGQ ++VPD ++N V  +S+++
Sbjct: 1   MGWFRLSTVLAVVIMADLMAAGLQSGWADLSRAAAPPTWGQAIDVPDRMLNSVFRVSESN 60

Query: 88  RVGLIASENAAIMFTPGAVTSGCK 112
            VG IAS +AA M TPGA+ SG +
Sbjct: 61  PVGPIASVHAARMLTPGAIKSGLR 84

BLAST of Cmc12g0324811 vs. ExPASy TrEMBL
Match: A0A2P5EWV5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_142890 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.1e-12
Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 0

Query: 28  MGFNVLSRTWEEVMMADLMAEGLQSGWRFRRRPTRPATWGQDMEVPDIVMNGVVLLSDAS 87
           MG+  LS     V+MADLMA GLQSGW    R   P TWGQ ++VPD ++N V  +S+++
Sbjct: 1   MGWFRLSTVLAVVIMADLMAAGLQSGWADLSRAAAPLTWGQAIDVPDRMLNSVFRVSESN 60

Query: 88  RVGLIASENAAIMFTPGAVTSGCK 112
            VG  AS +AA M TPGA+ SG +
Sbjct: 61  PVGPTASVHAARMLTPGAIKSGLR 84

BLAST of Cmc12g0324811 vs. ExPASy TrEMBL
Match: A0A7N0V6X1 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-10
Identity = 50/115 (43.48%), Postives = 64/115 (55.65%), Query Frame = 0

Query: 1   MAPVGLMWPEPYANGVAGARSRDPPSIMGFNVLSRTW--EEVMMADLMAEGLQSGWRFRR 60
           +A VGL WP P A   AG       S M F    R W   EVMMA+ MA G+QSGW    
Sbjct: 6   LALVGLTWPAPVAKRSAG---ESVWSTMMF--FPRLWVSAEVMMAERMAAGVQSGWELLS 65

Query: 61  RPTRPATWGQDMEVPDIVMNGVVLLSDASRVGLIASEN--AAIMFTPGAVTSGCK 112
           R   P  WGQDMEVP+I++N  V+ ++     L+++ N  AA M TPG + SG +
Sbjct: 66  RAEMPLRWGQDMEVPEIMLNVAVVGAE-----LLSTWNGQAARMLTPGPMMSGLR 110

BLAST of Cmc12g0324811 vs. ExPASy TrEMBL
Match: A0A0P0WDQ8 (Os04g0573200 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0573200 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.8e-10
Identity = 47/105 (44.76%), Postives = 58/105 (55.24%), Query Frame = 0

Query: 7   MWPEPYANGVAGARSRDPPSIMGFNVLSRTWEEVMMADLMAEGLQSGWRFRRRPTRPATW 66
           M P P +NGV         S +G  VLS T+  V+ ADL+  GLQSGW        PAT 
Sbjct: 1   MCPAPCSNGVDALPV--AASFIGRYVLSCTYAVVISADLICAGLQSGWLALISAATPATC 60

Query: 67  GQDMEVPDIVMNGVVLLSDASRVGLIASENAAIMFTPGAVTSGCK 112
           G DM+VPD ++N    LS     GL +  +AA MFTPGA TSG +
Sbjct: 61  GHDMDVPDRMLNPTRRLSLDKLDGLASPLHAAKMFTPGATTSGLR 103

BLAST of Cmc12g0324811 vs. ExPASy TrEMBL
Match: J3LAL6 (Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.8e-10
Identity = 43/82 (52.44%), Postives = 49/82 (59.76%), Query Frame = 0

Query: 28  MGFNVLSRTWEEVMMADLMAEGLQSGWRFRRRPTRPATWGQDMEVPDIVMNGVVLLSDAS 87
           MG+  LS +   VM A+ MA GLQSG   R RPT PAT G DMEVPD  +     LS A 
Sbjct: 1   MGWRSLSTSVAVVMSAERMAAGLQSGRSVRSRPTMPATCGHDMEVPDSELKATRRLSKAR 60

Query: 88  RVGLIASENAAIMFTPGAVTSG 110
            VG +A  +AA   TPGAV SG
Sbjct: 61  SVGELARVHAATTLTPGAVMSG 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON57783.12.2e-1251.19hypothetical protein PanWU01x14_171450 [Parasponia andersonii][more]
PON90003.18.5e-1250.00hypothetical protein TorRG33x02_142890 [Trema orientale][more]
KAB8096564.17.9e-1044.76hypothetical protein EE612_025061 [Oryza sativa] >KAB8096565.1 hypothetical prot... [more]
RWR95882.11.0e-0954.29hypothetical protein CKAN_02524200 [Cinnamomum micranthum f. kanehirae][more]
GER33831.13.0e-0959.02protein kinase 2B [Striga asiatica][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5C9S81.1e-1251.19Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_171450 PE... [more]
A0A2P5EWV54.1e-1250.00Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_142890 PE=4 SV... [more]
A0A7N0V6X11.7e-1043.48Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1[more]
A0A0P0WDQ83.8e-1044.76Os04g0573200 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0573200 PE... [more]
J3LAL63.8e-1052.44Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0324811.1Cmc12g0324811.1mRNA