Cmc12g0324351 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0324351
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
LocationCMiso1.1chr12: 13941050 .. 13941544 (+)
RNA-Seq ExpressionCmc12g0324351
SyntenyCmc12g0324351
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAATGAATTTGAAATCAAGGATTTGGAAAATCTAAAATATTTCCTTGCAGTGGAGGTGTTCAGATTTAAAGAAGACATCTCCGTGTCTCAGAGAAAATACATCCTTGATCTGCTAACCGAGACAGGTATGTTGGGATGTCGCCCAACTGACACTTCTATTGAATTCAACTATAAACTAGGAAACTTCGATGATCAAGTTCCAGTTGATAAAGAACAATATTGGCGCCTTGTGGGTAAATTGATTTACTTATCTCATACTCGTCCTAATATTTTCTTTGCTGTGAGTACTATTAGCCAGTTTATGCAGGCTCCTTATGAGGAACACATGGAAGCTGTTAAAAGAATTTTGAGATACTTAAAAACGACACCTGGTAAAGGGTTGATGTTTAGAAAGACAAACAAAAAGACCATTGAGCCATATACTGACTCAGATTGGGCAGGACCTATTGTTGACAAAAAGTCTACCTCCGATTATTATACCTTTGTTTAG

mRNA sequence

ATGGGTAATGAATTTGAAATCAAGGATTTGGAAAATCTAAAATATTTCCTTGCAGTGGAGGTGTTCAGATTTAAAGAAGACATCTCCGTGTCTCAGAGAAAATACATCCTTGATCTGCTAACCGAGACAGGTATGTTGGGATGTCGCCCAACTGACACTTCTATTGAATTCAACTATAAACTAGGAAACTTCGATGATCAAGTTCCAGTTGATAAAGAACAATATTGGCGCCTTGTGGGTAAATTGATTTACTTATCTCATACTCGTCCTAATATTTTCTTTGCTGTGAGTACTATTAGCCAGTTTATGCAGGCTCCTTATGAGGAACACATGGAAGCTGTTAAAAGAATTTTGAGATACTTAAAAACGACACCTGGTAAAGGGTTGATGTTTAGAAAGACAAACAAAAAGACCATTGAGCCATATACTGACTCAGATTGGGCAGGACCTATTGTTGACAAAAAGTCTACCTCCGATTATTATACCTTTGTTTAG

Coding sequence (CDS)

ATGGGTAATGAATTTGAAATCAAGGATTTGGAAAATCTAAAATATTTCCTTGCAGTGGAGGTGTTCAGATTTAAAGAAGACATCTCCGTGTCTCAGAGAAAATACATCCTTGATCTGCTAACCGAGACAGGTATGTTGGGATGTCGCCCAACTGACACTTCTATTGAATTCAACTATAAACTAGGAAACTTCGATGATCAAGTTCCAGTTGATAAAGAACAATATTGGCGCCTTGTGGGTAAATTGATTTACTTATCTCATACTCGTCCTAATATTTTCTTTGCTGTGAGTACTATTAGCCAGTTTATGCAGGCTCCTTATGAGGAACACATGGAAGCTGTTAAAAGAATTTTGAGATACTTAAAAACGACACCTGGTAAAGGGTTGATGTTTAGAAAGACAAACAAAAAGACCATTGAGCCATATACTGACTCAGATTGGGCAGGACCTATTGTTGACAAAAAGTCTACCTCCGATTATTATACCTTTGTTTAG

Protein sequence

MGNEFEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPTDTSIEFNYKLGNFDDQVPVDKEQYWRLVGKLIYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRYLKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSDYYTFV
Homology
BLAST of Cmc12g0324351 vs. NCBI nr
Match: KAA0035691.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK30854.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74
Identity = 142/159 (89.31%), Postives = 150/159 (94.34%), Query Frame = 0

Query: 1   MGNEFEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPTDTSIEFNYK 60
           MGNEFEIKDL NLKYFLA+EV RFKE ISVSQRKYILDLLTETGMLGCRPTDT IEFNYK
Sbjct: 320 MGNEFEIKDLGNLKYFLAMEVVRFKEGISVSQRKYILDLLTETGMLGCRPTDT-IEFNYK 379

Query: 61  LGNFDDQVPVDKEQYWRLVGKLIYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRY 120
           LGNFDDQVPVDKEQY  LVGKLIYLSHTRPNIFFAVS +SQFMQAPYEEHMEA+KRILRY
Sbjct: 380 LGNFDDQVPVDKEQYRCLVGKLIYLSHTRPNIFFAVSAVSQFMQAPYEEHMEAIKRILRY 439

Query: 121 LKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSD 160
           LKTTP KGLMFRKT+KKTIEPYTDSDWAGPI D+KS+++
Sbjct: 440 LKTTPSKGLMFRKTDKKTIEPYTDSDWAGPIADRKSSAE 477

BLAST of Cmc12g0324351 vs. NCBI nr
Match: TYK26804.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 280.8 bits (717), Expect = 7.6e-72
Identity = 139/164 (84.76%), Postives = 144/164 (87.80%), Query Frame = 0

Query: 1   MGNEFEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPTDTSIEFNYK 60
           MGNE EIKDL NLKYFL +EV R KE ISVSQRKY LDLLTE GMLGCRP DT IEFN K
Sbjct: 63  MGNELEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTEIGMLGCRPADTPIEFNCK 122

Query: 61  LGNFDDQVPVDKEQYWRLVGKLIYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRY 120
           LGNFDDQVPVDKEQY RLVGKLIYLSHTRP+I FAVS +SQFMQAPYEEHMEAVKRILRY
Sbjct: 123 LGNFDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSAVSQFMQAPYEEHMEAVKRILRY 182

Query: 121 LKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSDYYTFV 165
           LKTTP KGLMFRKTNKK IE YTDSDWAG +VD+KSTS Y TFV
Sbjct: 183 LKTTPNKGLMFRKTNKKAIEAYTDSDWAGSVVDRKSTSSYCTFV 226

BLAST of Cmc12g0324351 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 277.3 bits (708), Expect = 8.4e-71
Identity = 136/164 (82.93%), Postives = 145/164 (88.41%), Query Frame = 0

Query: 1    MGNEFEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPTDTSIEFNYK 60
            MG+EFEIKDL NLKYFL +EV R KE ISVSQRKY LDLLTETGMLGCRP DT IEFN K
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNFDDQVPVDKEQYWRLVGKLIYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRY 120
            LGN DDQVPVDKEQY RLVGKLIYLSHTRP+I FAVS +SQFMQAPYE+HMEAV RILRY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSDYYTFV 165
            LK TPGKGLMFRKTN+KTIE YTDSDWAG ++D+KSTS Y TFV
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

BLAST of Cmc12g0324351 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 277.3 bits (708), Expect = 8.4e-71
Identity = 136/164 (82.93%), Postives = 145/164 (88.41%), Query Frame = 0

Query: 1    MGNEFEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPTDTSIEFNYK 60
            MG+EFEIKDL NLKYFL +EV R KE ISVSQRKY LDLLTETGMLGCRP DT IEFN K
Sbjct: 1283 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1342

Query: 61   LGNFDDQVPVDKEQYWRLVGKLIYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRY 120
            LGN DDQVPVDKEQY RLVGKLIYLSHTRP+I FAVS +SQFMQAPYE+HMEAV RILRY
Sbjct: 1343 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1402

Query: 121  LKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSDYYTFV 165
            LK TPGKGLMFRKTN+KTIE YTDSDWAG ++D+KSTS Y TFV
Sbjct: 1403 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1446

BLAST of Cmc12g0324351 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 277.3 bits (708), Expect = 8.4e-71
Identity = 136/164 (82.93%), Postives = 145/164 (88.41%), Query Frame = 0

Query: 1    MGNEFEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPTDTSIEFNYK 60
            MG+EFEIKDL NLKYFL +EV R KE ISVSQRKY LDLLTETGMLGCRP DT IEFN K
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNFDDQVPVDKEQYWRLVGKLIYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRY 120
            LGN DDQVPVDKEQY RLVGKLIYLSHTRP+I FAVS +SQFMQAPYE+HMEAV RILRY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSDYYTFV 165
            LK TPGKGLMFRKTN+KTIE YTDSDWAG ++D+KSTS Y TFV
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

BLAST of Cmc12g0324351 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.7e-32
Identity = 69/164 (42.07%), Postives = 99/164 (60.37%), Query Frame = 0

Query: 1    MGNEFEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPTDTSIEFNYK 60
            +   F +KD E L YFL +E  R    + +SQR+YILDLL  T M+  +P  T +  + K
Sbjct: 1171 LSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPK 1230

Query: 61   LGNFDDQVPVDKEQYWRLVGKLIYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRY 120
            L  +      D  +Y  +VG L YL+ TRP+I +AV+ +SQFM  P EEH++A+KRILRY
Sbjct: 1231 LSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRY 1290

Query: 121  LKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSDYYTFV 165
            L  TP  G+  +K N  ++  Y+D+DWAG   D  ST+ Y  ++
Sbjct: 1291 LAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYL 1334

BLAST of Cmc12g0324351 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-29
Identity = 63/164 (38.41%), Postives = 97/164 (59.15%), Query Frame = 0

Query: 1    MGNEFEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPTDTSIEFNYK 60
            +   F +K+ E+L YFL +E  R  + + +SQR+Y LDLL  T ML  +P  T +  + K
Sbjct: 1154 LSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPK 1213

Query: 61   LGNFDDQVPVDKEQYWRLVGKLIYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRY 120
            L         D  +Y  +VG L YL+ TRP++ +AV+ +SQ+M  P ++H  A+KR+LRY
Sbjct: 1214 LTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRY 1273

Query: 121  LKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSDYYTFV 165
            L  TP  G+  +K N  ++  Y+D+DWAG   D  ST+ Y  ++
Sbjct: 1274 LAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYL 1317

BLAST of Cmc12g0324351 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.7e-22
Identity = 55/164 (33.54%), Postives = 88/164 (53.66%), Query Frame = 0

Query: 1   MGNEFEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPTDTSIEFNYK 60
           + + F +KDL  + YFL +++      + +SQ KY   +L   GML C+P  T +     
Sbjct: 27  LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN 86

Query: 61  LGNFDDQVPVDKEQYWRLVGKLIYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRY 120
                 + P D   +  +VG L YL+ TRP+I +AV+ + Q M  P     + +KR+LRY
Sbjct: 87  SSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRY 146

Query: 121 LKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSDYYTFV 165
           +K T   GL   K +K  ++ + DSDWAG    ++ST+ + TF+
Sbjct: 147 VKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 189

BLAST of Cmc12g0324351 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16
Identity = 53/162 (32.72%), Postives = 89/162 (54.94%), Query Frame = 0

Query: 4    EFEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPTDTSI--EFNYKL 63
            +F + DL  +K+F+ + +   ++ I +SQ  Y+  +L++  M  C    T +  + NY+L
Sbjct: 1111 KFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYEL 1170

Query: 64   GNFDDQVPVDKEQYWRLVGKLIYLS-HTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRY 123
             N D+           L+G L+Y+   TRP++  AV+ +S++      E  + +KR+LRY
Sbjct: 1171 LNSDEDCNTPCRS---LIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRY 1230

Query: 124  LKTTPGKGLMFRK--TNKKTIEPYTDSDWAGPIVDKKSTSDY 161
            LK T    L+F+K    +  I  Y DSDWAG  +D+KST+ Y
Sbjct: 1231 LKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGY 1269

BLAST of Cmc12g0324351 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16
Identity = 59/173 (34.10%), Postives = 96/173 (55.49%), Query Frame = 0

Query: 1    MGNEFEIKDLENLKYFLAVEVFRFK--EDISVSQRKYILDLLTETGMLGCRPTDTSIEFN 60
            +   F++KDL   +  L +++ R +    + +SQ KYI  +L    M   +P  T +  +
Sbjct: 1029 LSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGH 1088

Query: 61   YKLG------NFDDQVPVDKEQYWRLVGKLIY-LSHTRPNIFFAVSTISQFMQAPYEEHM 120
             KL         +++  + K  Y   VG L+Y +  TRP+I  AV  +S+F++ P +EH 
Sbjct: 1089 LKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHW 1148

Query: 121  EAVKRILRYLKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSDY-YTF 164
            EAVK ILRYL+ T G  L F  ++   ++ YTD+D AG I ++KS++ Y +TF
Sbjct: 1149 EAVKWILRYLRGTTGDCLCFGGSD-PILKGYTDADMAGDIDNRKSSTGYLFTF 1200

BLAST of Cmc12g0324351 vs. ExPASy TrEMBL
Match: A0A5D3E4L6 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00520 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 6.0e-75
Identity = 142/159 (89.31%), Postives = 150/159 (94.34%), Query Frame = 0

Query: 1   MGNEFEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPTDTSIEFNYK 60
           MGNEFEIKDL NLKYFLA+EV RFKE ISVSQRKYILDLLTETGMLGCRPTDT IEFNYK
Sbjct: 320 MGNEFEIKDLGNLKYFLAMEVVRFKEGISVSQRKYILDLLTETGMLGCRPTDT-IEFNYK 379

Query: 61  LGNFDDQVPVDKEQYWRLVGKLIYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRY 120
           LGNFDDQVPVDKEQY  LVGKLIYLSHTRPNIFFAVS +SQFMQAPYEEHMEA+KRILRY
Sbjct: 380 LGNFDDQVPVDKEQYRCLVGKLIYLSHTRPNIFFAVSAVSQFMQAPYEEHMEAIKRILRY 439

Query: 121 LKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSD 160
           LKTTP KGLMFRKT+KKTIEPYTDSDWAGPI D+KS+++
Sbjct: 440 LKTTPSKGLMFRKTDKKTIEPYTDSDWAGPIADRKSSAE 477

BLAST of Cmc12g0324351 vs. ExPASy TrEMBL
Match: A0A5D3DTD0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G001170 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.7e-72
Identity = 139/164 (84.76%), Postives = 144/164 (87.80%), Query Frame = 0

Query: 1   MGNEFEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPTDTSIEFNYK 60
           MGNE EIKDL NLKYFL +EV R KE ISVSQRKY LDLLTE GMLGCRP DT IEFN K
Sbjct: 63  MGNELEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTEIGMLGCRPADTPIEFNCK 122

Query: 61  LGNFDDQVPVDKEQYWRLVGKLIYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRY 120
           LGNFDDQVPVDKEQY RLVGKLIYLSHTRP+I FAVS +SQFMQAPYEEHMEAVKRILRY
Sbjct: 123 LGNFDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSAVSQFMQAPYEEHMEAVKRILRY 182

Query: 121 LKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSDYYTFV 165
           LKTTP KGLMFRKTNKK IE YTDSDWAG +VD+KSTS Y TFV
Sbjct: 183 LKTTPNKGLMFRKTNKKAIEAYTDSDWAGSVVDRKSTSSYCTFV 226

BLAST of Cmc12g0324351 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.0e-71
Identity = 136/164 (82.93%), Postives = 145/164 (88.41%), Query Frame = 0

Query: 1    MGNEFEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPTDTSIEFNYK 60
            MG+EFEIKDL NLKYFL +EV R KE ISVSQRKY LDLLTETGMLGCRP DT IEFN K
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNFDDQVPVDKEQYWRLVGKLIYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRY 120
            LGN DDQVPVDKEQY RLVGKLIYLSHTRP+I FAVS +SQFMQAPYE+HMEAV RILRY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSDYYTFV 165
            LK TPGKGLMFRKTN+KTIE YTDSDWAG ++D+KSTS Y TFV
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

BLAST of Cmc12g0324351 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.0e-71
Identity = 136/164 (82.93%), Postives = 145/164 (88.41%), Query Frame = 0

Query: 1    MGNEFEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPTDTSIEFNYK 60
            MG+EFEIKDL NLKYFL +EV R KE ISVSQRKY LDLLTETGMLGCRP DT IEFN K
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNFDDQVPVDKEQYWRLVGKLIYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRY 120
            LGN DDQVPVDKEQY RLVGKLIYLSHTRP+I FAVS +SQFMQAPYE+HMEAV RILRY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSDYYTFV 165
            LK TPGKGLMFRKTN+KTIE YTDSDWAG ++D+KSTS Y TFV
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

BLAST of Cmc12g0324351 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.0e-71
Identity = 136/164 (82.93%), Postives = 145/164 (88.41%), Query Frame = 0

Query: 1    MGNEFEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPTDTSIEFNYK 60
            MG+EFEIKDL NLKYFL +EV R KE ISVSQRKY LDLLTETGMLGCRP DT IEFN K
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNFDDQVPVDKEQYWRLVGKLIYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRY 120
            LGN DDQVPVDKEQY RLVGKLIYLSHTRP+I FAVS +SQFMQAPYE+HMEAV RILRY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSDYYTFV 165
            LK TPGKGLMFRKTN+KTIE YTDSDWAG ++D+KSTS Y TFV
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

BLAST of Cmc12g0324351 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 122.9 bits (307), Expect = 2.5e-28
Identity = 67/165 (40.61%), Postives = 105/165 (63.64%), Query Frame = 0

Query: 5   FEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPT----DTSIEFN-Y 64
           F+++DL  LKYFL +E+ R    I++ QRKY LDLL ETG+LGC+P+    D S+ F+ +
Sbjct: 308 FKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 367

Query: 65  KLGNFDDQVPVDKEQYWRLVGKLIYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILR 124
             G+F     VD + Y RL+G+L+YL  TR +I FAV+ +SQF +AP   H +AV +IL 
Sbjct: 368 SGGDF-----VDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILH 427

Query: 125 YLKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSDYYTFV 165
           Y+K T G+GL +    +  ++ ++D+ +      ++ST+ Y  F+
Sbjct: 428 YIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467

BLAST of Cmc12g0324351 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 4.1e-23
Identity = 55/164 (33.54%), Postives = 88/164 (53.66%), Query Frame = 0

Query: 1   MGNEFEIKDLENLKYFLAVEVFRFKEDISVSQRKYILDLLTETGMLGCRPTDTSIEFNYK 60
           + + F +KDL  + YFL +++      + +SQ KY   +L   GML C+P  T +     
Sbjct: 27  LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN 86

Query: 61  LGNFDDQVPVDKEQYWRLVGKLIYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRY 120
                 + P D   +  +VG L YL+ TRP+I +AV+ + Q M  P     + +KR+LRY
Sbjct: 87  SSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRY 146

Query: 121 LKTTPGKGLMFRKTNKKTIEPYTDSDWAGPIVDKKSTSDYYTFV 165
           +K T   GL   K +K  ++ + DSDWAG    ++ST+ + TF+
Sbjct: 147 VKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 189

BLAST of Cmc12g0324351 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-10
Identity = 30/82 (36.59%), Postives = 51/82 (62.20%), Query Frame = 0

Query: 83  IYLSHTRPNIFFAVSTISQFMQAPYEEHMEAVKRILRYLKTTPGKGLMFRKTNKKTIEPY 142
           +YL+ TRP++ FAV+ +SQF  A     M+AV ++L Y+K T G+GL +  T+   ++ +
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 143 TDSDWAGPIVDKKSTSDYYTFV 165
            DSDWA     ++S + + + V
Sbjct: 61  ADSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0035691.11.2e-7489.31putative mitochondrial protein [Cucumis melo var. makuwa] >TYK30854.1 putative m... [more]
TYK26804.17.6e-7284.76putative mitochondrial protein [Cucumis melo var. makuwa][more]
TYJ99952.18.4e-7182.93Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu... [more]
KAA0031941.18.4e-7182.93Beta-galactosidase [Cucumis melo var. makuwa][more]
TYK08054.18.4e-7182.93Beta-galactosidase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q94HW22.7e-3242.07Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT942.8e-2938.41Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P925195.7e-2233.54Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
P041461.6e-1632.72Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P109781.6e-1634.10Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Match NameE-valueIdentityDescription
A0A5D3E4L66.0e-7589.31Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5D3DTD03.7e-7284.76Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5D3BJK74.0e-7182.93Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0... [more]
A0A5D3C4T44.0e-7182.93Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00... [more]
A0A5A7VLQ74.0e-7182.93Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0... [more]
Match NameE-valueIdentityDescription
AT4G23160.12.5e-2840.61cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.14.1e-2333.54DNA/RNA polymerases superfamily protein [more]
ATMG00240.11.8e-1036.59Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF335SUBFAMILY NOT NAMEDcoord: 9..147
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 9..147
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 30..150

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0324351.1Cmc12g0324351.1mRNA