Cmc12g0322771 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0322771
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionorganic cation/carnitine transporter 7
LocationCMiso1.1chr12: 11066425 .. 11069377 (+)
RNA-Seq ExpressionCmc12g0322771
SyntenyCmc12g0322771
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGAAAAAACGATTCATTAAAGAATTAAAAAAAAATCTAAATCCCCATTTTTTTCTCTCTCCACAATACTACCCAAAACCCCATTTTCCATCTCCACTATTCGCAACGAACGACGACGGCTGATGGTGACCTTCGGCGGCGACCGACGTCTGACGGTGACCCACGACGCGATGCTACACTAGAACGGCTACGAGTGAAAGACTCCACGCGAATGGCTCCACCCGAACGTCTGACGGTGACCCACTCTGACGATGCTCGTGAACCGTGGCCATGACTTAGCTGTTTTTGATTTCGAGACATTGCGCACGGCTGACCCTTTTATTGCTGGTATGCTTGTTTCTATTTCTTAATTTGAAGTTGAATCTCTGGTATTTCCTTTTTTCTCTACAATTCGTTGATTCCGGATTATTGTAGGTTGGTTTCTAAGTGCTTATAGGTTGTACAATCATGTCTTCAAGTCTAAGGTTCCATATCCATAAGAAAGCTCCAACATGATGAAGTCAAAGATTTTGCTTGTCCTTTTTGAATGAACGACCTAAGTAATTGGGAAATGGGAATAAGATGTCTCCAGGTCTTGGAAATTCCCATCCAAAAGTTCTAGTAAAAATTATATATGTAACTCTGTGACATAGATGCAGCTGCTAAAATTGTGGATTTCATTTTCAAAATGTCGAATGTGTACTTTTTAAACAGTTTTTTGAAGAGTCAGCTCTTCTTCATCTATTAATCAAACATAAACTAACTATTACACACTAATCCTTAGCATTTGGGCCATACTAATTCTAACACATATTAATTAGCATCAATCACCTAGAAAGTGATTACACAATCTCAGCAACATTTGTTGAGGCTCTCTCTTGAACTTTTACCACCAATCCTTTCATCTTCAACTTTGAGATTTGAATTTTTTGCCATTGATTCTCAAGTTGCAACCTTGCAGTTGAAGGCTGAAGCTTCATACATGTGAAAGGTTGGTTTTCATTTCAATTTTATTGCTCTGTTCCAAGTTTCAAGCACCATTTGTATAAATCAAAACTCTCTTCACCTTCCCTAGGATGGCTTCACCTTCAATTATATTCCATTCAAAACAACCTAAGAAATGATAAATTTTCCATCTAAAGCTATATAGTTACTAACCAGAATTTCTGTTATGACCATGAAGGTAACACTCTTCCATTATTACCATGATCCAAGTTATTGTTTAGCTCCAAGTCGCGAATTTCATAATGACTGTCATCGAAATCCAGCTCACTGTCAAATAATTGATCTGGATGTTCCGGCCTAGAAGAATTGTGGACTTTAGGATCTTTGTGCTGAATATTTGTTGCCCTCTTCTTTGATCTATCAAAGCTTTTAGTGGCATCATTTTCATCTAAATATTCATCTTTATCTTTATTTCCGCCTCTTCTTCATTTTCCAGAATCGTTACTGTCATTACTGTTGCTTCCATTTTTTCCTGCTCCATAGAATTCCTTGATGGTAGATTCTATGGTTTCCAAAATACGGTCACCGTACTTCCTCTTCTTCTTCACTAGTGCTTGTTTCAAATTTGTATAATACCTTAAACAGAGACTTAGACGAGAAGGAGCGACCATGCATTGTATTTACACGATTTTGTTATTGAATGCAAAATGCATTTGGAGGGGGACTGGGAGCTAGGGTCCATTAGCTTCAGAAAAAAGAAAAAAGAGAAAACTGGTTGATAGAAGTACATGTCTTCCCGGAAATCTGGCAACTAGGAAAATTTTGATTTATGAAGTAGTAGATAGTACATGTCTTGTTACCTTTTCTACATGAAAATAGTTTTTACATTATCCTATTTGTTCGAATTCTATGGTTACTGTTATGTTCCACAACTTCTTGTTACATATTTATTTCTCTTGTTTGAAAAGGCCGATGTTTCTCAATCAAGTCTGTTTCATGTTTAGCCTATGCTTACTCTCTCAAGGCATTTGTGCTAGTTTCTAGCTCGTATATTGTTGATTCTTCTTTTCTTCTTTTCTTCTTTTTGTGCAGTCTATTTGGTGGTTCATGTGTCCTCCAAAGATGCTAGTTTGTGTTTTATATCCCGCTTTTATGCAATCTATAAATTTATCAATATCTTAGCATTTTGTATTCTAACTTCCAATTGTTTTCTTTTTTGTTATAAATATTTTAGGTTAAAAGATACTTAGGTGTATTCTAGATAGGCCAGTATCATTACTTGTCATCTTCTCATCTTGATGAGAACAAGTAATATTAAATGTCATCTTCTCAAATTTGATATTCTAGAGATAAAAACAAGTCTACCAATACATCAAGAAGTTTGCAAGAAGGTTTTATGGCCTCAAGTTGTGTTGAGGCCATCTCTTAATATTAGTCATTCAAAGCAACAGAACATCTTAAGTCTTTGAGTTCTAAGTTATTGTTTGAAGTTTGTTTTTAACACCATAGACATTGATAGCTTTTTTATGAAAGTTGATCAACTTAAACTATTATTAGGAGACTATAATGAGATCTCTATATTTCTGGAAAATTCTCTCATATCTGAAATTAGTGTGGAGTACTTCTTGTTTTGTAAGGTGGAGGATGGAGGTGAAAGTCCGAGGTACACCATTGACGAAGCTCTTGTATCCATGGGTTTTGGGAAATTTCAAATTCTTGTGCTTGCTTATGCTGGAATGGGATGGGTATGAGGAGCTATGGAATGTTGCATATTACATAGTAGAACCATAAGAGCTGACGTTATTTGGCCACAGGCCACAGTAATCTTATCATCCATCACGGCCCAATTTTAAACTTGACACATATTTTGCTTGTCACACTTGTAGAATGAGCCAACGGGGAGTATGTGTGTACCTTAAGGAGGGATAGGTCAATAACAGAGAAAATTGTTTGATGTGTGATTTTTTCCCAAGTGGTTATAGATCCTAAAAGTAATTAGTAGAGTAATGAAACTTAGCTACATAGCCT

mRNA sequence

TTTGAAAAAACGATTCATTAAAGAATTAAAAAAAAATCTAAATCCCCATTTTTTTCTCTCTCCACAATACTACCCAAAACCCCATTTTCCATCTCCACTATTCGCAACGAACGACGACGGCTGATGGTGACCTTCGGCGGCGACCGACGTCTGACGGTGACCCACGACGCGATGCTACACTAGAACGGCTACGAGTGAAAGACTCCACGCGAATGGCTCCACCCGAACGTCTGACGGTGACCCACTCTGACGATGCTCGTGAACCGTGGCCATGACTTAGCTGTTTTTGATTTCGAGACATTGCGCACGGCTGACCCTTTTATTGCTGGTTGGTTTCTAAGTGCTTATAGGTTGTACAATCATGTCTTCAAGTCTAAGGTTCCATATCCATAAGAAAGCTCCAACATGATGAAGTCAAAGATTTTGCTTGTCCTTTTTGAATGAACGACCTAAGTAATTGGGAAATGGGAATAAGATGTCTCCAGGTCTTGGAAATTCCCATCCAAAAGTTCTAGTAAAAATTATATATGTAACTCTGTGACATAGATGCAGCTGCTAAAATTGTGGATTTCATTTTCAAAATGTCGAATGTGTACTTTTTAAACAGTTTTTTGAAGAGTCAGCTCTTCTTCATCTATTAATCAAACATAAACTAACTATTACACACTAATCCTTAGCATTTGGGCCATACTAATTCTAACACATATTAATTAGCATCAATCACCTAGAAAGTGATTACACAATCTCAGCAACATTTGTTGAGGCTCTCTCTTGAACTTTTACCACCAATCCTTTCATCTTCAACTTTGAGATTTGAATTTTTTGCCATTGATTCTCAAGTTGCAACCTTGCAGTTGAAGGCTGAAGCTTCATACATGTGAAAGGTTGGTTTTCATTTCAATTTTATTGCTCTGTTCCAAGTTTCAAGCACCATTTGTATAAATCAAAACTCTCTTCACCTTCCCTAGGATGGCTTCACCTTCAATTATATTCCATTCAAAACAACCTAAGAAATGATAAATTTTCCATCTAAAGCTATATAGTTACTAACCAGAATTTCTGTTATGACCATGAAGGTAACACTCTTCCATTATTACCATGATCCAAGTTATTGTTTAGCTCCAAGTCGCGAATTTCATAATGACTGTCATCGAAATCCAGCTCACTGTCAAATAATTGATCTGGATGTTCCGGCCTAGAAGAATTGTGGACTTTAGGATCTTTGTGCTGAATATTTGTTGCCCTCTTCTTTGATCTATCAAAGCTTTTAGTGGCATCATTTTCATCTAAATATTCATCTTTATCTTTATTTCCGCCTCTTCTTCATTTTCCAGAATCGTTACTGTCATTACTGTTGCTTCCATTTTTTCCTGCTCCATAGAATTCCTTGATGGTAGATTCTATGGTTTCCAAAATACGGTCACCGTACTTCCTCTTCTTCTTCACTAGTGCTTGTTTCAAATTTGTATAATACCTTAAACAGAGACTTAGACGAGAAGGAGCGACCATGCATTGTATTTACACGATTTTGTTATTGAATGCAAAATGCATTTGGAGGGGGACTGGGAGCTAGGGTCCATTAGCTTCAGAAAAAAGAAAAAAGAGAAAACTGGTTGATAGAAGTACATGTCTTCCCGGAAATCTGGCAACTAGGAAAATTTTGATTTATGAAGTAGTAGATAGTACATGTCTTGTTACCTTTTCTACATGAAAATAGTTTTTACATTATCCTATTTGTTCGAATTCTATGGTTACTGTTATGTTCCACAACTTCTTGTTACATATTTATTTCTCTTGTTTGAAAAGGCCGATGTTTCTCAATCAAGTCTGTTTCATGTTTAGCCTATGCTTACTCTCTCAAGGCATTTGTGCTAGTTTCTAGCTCGTATATTGTTGATTCTTCTTTTCTTCTTTTCTTCTTTTTGTGCAGTCTATTTGGTGGTTCATGTGTCCTCCAAAGATGCTAGTTTGTGTTTTATATCCCGCTTTTATGCAATCTATAAATTTATCAATATCTTAGCATTTTGTATTCTAACTTCCAATTGTTTTCTTTTTTGTTATAAATATTTTAGGTTAAAAGATACTTAGGTGTATTCTAGATAGGCCAGTATCATTACTTGTCATCTTCTCATCTTGATGAGAACAAGTAATATTAAATGTCATCTTCTCAAATTTGATATTCTAGAGATAAAAACAAGTCTACCAATACATCAAGAAGTTTGCAAGAAGGTTTTATGGCCTCAAGTTGTGTTGAGGCCATCTCTTAATATTAGTCATTCAAAGCAACAGAACATCTTAAGTCTTTGAGTTCTAAGTTATTGTTTGAAGTTTGTTTTTAACACCATAGACATTGATAGCTTTTTTATGAAAGTTGATCAACTTAAACTATTATTAGGAGACTATAATGAGATCTCTATATTTCTGGAAAATTCTCTCATATCTGAAATTAGTGTGGAGTACTTCTTGTTTTGTAAGGTGGAGGATGGAGGTGAAAGTCCGAGGTACACCATTGACGAAGCTCTTGTATCCATGGGTTTTGGGAAATTTCAAATTCTTGTGCTTGCTTATGCTGGAATGGGATGGGTATGAGGAGCTATGGAATGTTGCATATTACATAGTAGAACCATAAGAGCTGACGTTATTTGGCCACAGGCCACAGTAATCTTATCATCCATCACGGCCCAATTTTAAACTTGACACATATTTTGCTTGTCACACTTGTAGAATGAGCCAACGGGGAGTATGTGTGTACCTTAAGGAGGGATAGGTCAATAACAGAGAAAATTGTTTGATGTGTGATTTTTTCCCAAGTGGTTATAGATCCTAAAAGTAATTAGTAGAGTAATGAAACTTAGCTACATAGCCT

Coding sequence (CDS)

ATGAAAGTTGATCAACTTAAACTATTATTAGGAGACTATAATGAGATCTCTATATTTCTGGAAAATTCTCTCATATCTGAAATTAGTGTGGAGTACTTCTTGTTTTGTAAGGTGGAGGATGGAGGTGAAAGTCCGAGGTACACCATTGACGAAGCTCTTGTATCCATGGGTTTTGGGAAATTTCAAATTCTTGTGCTTGCTTATGCTGGAATGGGATGGGTATGA

Protein sequence

MKVDQLKLLLGDYNEISIFLENSLISEISVEYFLFCKVEDGGESPRYTIDEALVSMGFGKFQILVLAYAGMGWV
Homology
[Close]
BLAST of Cmc12g0322771 vs. NCBI nr
Match: XP_008456184.1 (PREDICTED: organic cation/carnitine transporter 7 [Cucumis melo] >KAA0037214.1 organic cation/carnitine transporter 7 [Cucumis melo var. makuwa] >TYK13859.1 organic cation/carnitine transporter 7 [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 7.5e-11
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 37 KVEDGGESPRYTIDEALVSMGFGKFQILVLAYAGMGWV 75
          +VEDGGESPRYTIDEALVSMGFG FQILVLAYAGMGW+
Sbjct: 16 QVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWI 53

[Close]
BLAST of Cmc12g0322771 vs. NCBI nr
Match: XP_022983574.1 (organic cation/carnitine transporter 7-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 74.7 bits (182), Expect = 3.7e-10
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 37 KVEDGGESPRYTIDEALVSMGFGKFQILVLAYAGMGWV 75
          +VEDGGESPRYTIDEALVSMGFG +QILVL YAGMGWV
Sbjct: 14 QVEDGGESPRYTIDEALVSMGFGNYQILVLVYAGMGWV 51

[Close]
BLAST of Cmc12g0322771 vs. NCBI nr
Match: XP_023529009.1 (organic cation/carnitine transporter 7-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 74.7 bits (182), Expect = 3.7e-10
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 37 KVEDGGESPRYTIDEALVSMGFGKFQILVLAYAGMGWV 75
          +VEDGGESPRYTIDEALVSMGFG +QILVL YAGMGWV
Sbjct: 14 QVEDGGESPRYTIDEALVSMGFGNYQILVLVYAGMGWV 51

[Close]
BLAST of Cmc12g0322771 vs. NCBI nr
Match: XP_022935558.1 (organic cation/carnitine transporter 7-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 74.7 bits (182), Expect = 3.7e-10
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 37 KVEDGGESPRYTIDEALVSMGFGKFQILVLAYAGMGWV 75
          +VEDGGESPRYTIDEALVSMGFG +QILVL YAGMGWV
Sbjct: 14 QVEDGGESPRYTIDEALVSMGFGNYQILVLVYAGMGWV 51

[Close]
BLAST of Cmc12g0322771 vs. NCBI nr
Match: KAG7017977.1 (Organic cation/carnitine transporter 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 74.7 bits (182), Expect = 3.7e-10
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 37 KVEDGGESPRYTIDEALVSMGFGKFQILVLAYAGMGWV 75
          +VEDGGESPRYTIDEALVSMGFG +QILVL YAGMGWV
Sbjct: 14 QVEDGGESPRYTIDEALVSMGFGNYQILVLVYAGMGWV 51

[Close]
BLAST of Cmc12g0322771 vs. ExPASy Swiss-Prot
Match: Q940M4 (Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 8.0e-08
Identity = 25/29 (86.21%), Postives = 28/29 (96.55%), Query Frame = 0 

Query: 46 RYTIDEALVSMGFGKFQILVLAYAGMGWV 75
          R+T+DEALV+MGFGKFQI VLAYAGMGWV
Sbjct: 7  RFTVDEALVAMGFGKFQIYVLAYAGMGWV 35

[Close]
BLAST of Cmc12g0322771 vs. ExPASy TrEMBL
Match: A0A5A7T162 (Organic cation/carnitine transporter 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00440 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.6e-11
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 37 KVEDGGESPRYTIDEALVSMGFGKFQILVLAYAGMGWV 75
          +VEDGGESPRYTIDEALVSMGFG FQILVLAYAGMGW+
Sbjct: 16 QVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWI 53

[Close]
BLAST of Cmc12g0322771 vs. ExPASy TrEMBL
Match: A0A1S3C3X5 (organic cation/carnitine transporter 7 OS=Cucumis melo OX=3656 GN=LOC103496199 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.6e-11
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 37 KVEDGGESPRYTIDEALVSMGFGKFQILVLAYAGMGWV 75
          +VEDGGESPRYTIDEALVSMGFG FQILVLAYAGMGW+
Sbjct: 16 QVEDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWI 53

[Close]
BLAST of Cmc12g0322771 vs. ExPASy TrEMBL
Match: A0A6J1J7T5 (organic cation/carnitine transporter 7-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482137 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.8e-10
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 37 KVEDGGESPRYTIDEALVSMGFGKFQILVLAYAGMGWV 75
          +VEDGGESPRYTIDEALVSMGFG +QILVL YAGMGWV
Sbjct: 14 QVEDGGESPRYTIDEALVSMGFGNYQILVLVYAGMGWV 51

[Close]
BLAST of Cmc12g0322771 vs. ExPASy TrEMBL
Match: A0A6J1J688 (organic cation/carnitine transporter 7-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482137 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.8e-10
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 37 KVEDGGESPRYTIDEALVSMGFGKFQILVLAYAGMGWV 75
          +VEDGGESPRYTIDEALVSMGFG +QILVL YAGMGWV
Sbjct: 14 QVEDGGESPRYTIDEALVSMGFGNYQILVLVYAGMGWV 51

[Close]
BLAST of Cmc12g0322771 vs. ExPASy TrEMBL
Match: A0A0A0L6X7 (MFS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G198470 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.8e-10
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 37 KVEDGGESPRYTIDEALVSMGFGKFQILVLAYAGMGWV 75
          +V DGGESPRYTIDEALVSMGFG FQILVLAYAGMGWV
Sbjct: 16 QVGDGGESPRYTIDEALVSMGFGNFQILVLAYAGMGWV 53

[Close]
BLAST of Cmc12g0322771 vs. TAIR 10
Match: AT3G13050.1 (Major facilitator superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 5.7e-09
Identity = 25/29 (86.21%), Postives = 28/29 (96.55%), Query Frame = 0 

Query: 46 RYTIDEALVSMGFGKFQILVLAYAGMGWV 75
          R+T+DEALV+MGFGKFQI VLAYAGMGWV
Sbjct: 7  RFTVDEALVAMGFGKFQIYVLAYAGMGWV 35

The following BLAST results are available for this feature:
BLAST of Cmc12g0322771 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008456184.17.5e-1192.11PREDICTED: organic cation/carnitine transporter 7 [Cucumis melo] >KAA0037214.1 o... [more]
XP_022983574.13.7e-1089.47organic cation/carnitine transporter 7-like isoform X1 [Cucurbita maxima][more]
XP_023529009.13.7e-1089.47organic cation/carnitine transporter 7-like isoform X1 [Cucurbita pepo subsp. pe... [more]
XP_022935558.13.7e-1089.47organic cation/carnitine transporter 7-like isoform X1 [Cucurbita moschata][more]
KAG7017977.13.7e-1089.47Organic cation/carnitine transporter 7 [Cucurbita argyrosperma subsp. argyrosper... [more]
BLAST of Cmc12g0322771 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q940M48.0e-0886.21Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 P... [more]
BLAST of Cmc12g0322771 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T1623.6e-1192.11Organic cation/carnitine transporter 7 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3C3X53.6e-1192.11organic cation/carnitine transporter 7 OS=Cucumis melo OX=3656 GN=LOC103496199 P... [more]
A0A6J1J7T51.8e-1089.47organic cation/carnitine transporter 7-like isoform X1 OS=Cucurbita maxima OX=36... [more]
A0A6J1J6881.8e-1089.47organic cation/carnitine transporter 7-like isoform X2 OS=Cucurbita maxima OX=36... [more]
A0A0A0L6X71.8e-1092.11MFS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G198470 PE=4 SV... [more]
BLAST of Cmc12g0322771 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13050.15.7e-0986.21Major facilitator superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0322771.1Cmc12g0322771.1mRNA