Cmc12g0322131 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0322131
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	CACTA en-spm transposon protein
Location	CMiso1.1chr12: 9751528 .. 9753078 (+)
RNA-Seq Expression	Cmc12g0322131
Synteny	Cmc12g0322131

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGGAGAGGAGAAAAAGAAAGGAGAAGAAGAAGAACGTCGCCCGGCCGTGCTTTCCTTTTGTTCCGCCGCCGTCCGTCGCCGACCGCCTCGCCGTTGTTCCTCGTCGCCGTCTGCCACTTTAGGTAAGTGAAATATGTAAATTTATTTAGTTTTTTTAGGGTTTTTTTTGATAAAAATTAGTTTAGGGTTTGTTTGTTTTTTTGTTTCAAAGTTAAAAAAATGTATGTATTATTGAAATTGTTTAAAGTTCTTTTTTGTTTTTGTTTTAGTTTTGCTTTAGTTAATTAGTTTTAGGATTAGTTTTAGAATTTAGATTTTGAAATAGTTTTAGGATATAGATTTTGAATTAGTTTTAGGTTTTAGTGTTGAATTTGAATTTGAAGTGGTTTTAGGATTTAAGATTGACGTTGAGATTGAAGTTGAAATTGAATTTGAGATTGATAAAAAATTTGAATGTGTAGAGATTTTTGAGGTTATATTGAATTGGGGGGGGTGTTTATTGAATTTGAGATTGTGATTTAGGATCTCCAATTACTTAGTCGTTTGAACTTTGAGAAATACCTAATAAACTTTTAATTTTGTGTTTATACAAAATGTTTAACATTCTTCAATCTTATATACGGATGGTTTTAATGGGTCTACTCAACATATTTCTTAAAACATGAGATTTATGAGAATGTGTTAGAATGCTAAGTTTCTGAAAATATTAGAGCAAAGAGATAATTTAAAGCAAAGCTAGATTTGAGACTTGCTTAATGCAAGAGTTTCTTTTTTCATAAGCATGCTAACTTAAGAAAGTTAAAGTTTTAGCATGAGATTTTTGAATATGCTTAAGTCTATACCGAGATGTCTTGATCTGATAGAAATTCTATGGGGAAGATTATCTTGTGTACAGTGGTCGTGTAATTATTATGAAATGGAATTACTACTTATCTGGGGAGAGGGAGGTTTAAGTTAAATTGAAAATGTTTGTTTTCTATGTCCATAGCCATTATTATGTCATATCGACCATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGACGATTTAGATAATAACATCGCAGGAGGGTCATCATCTGTGGGCGACAATACGGGTGAGTCTAAGAATTTTCTTCATTTTAACTTACAAATATTTCATGTTCTTTTTTCTAACTTTATATGTTATTGTTTATTTATTGAGCAGAGTCTTCTTCTCAACAAACGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACAAGTGGAAGCTATGAAAAAGATGATTGAAGACCTAACTCGTGCACAACAGGGACCACCACATGATCCCTAGCTTCATTATGTTTATGTTTTTTCTATATTGAGAACTATATTTTGTTGTAGTCAACTTATTCGTATTATTAATTTTAATTCTATTTTTTTAATTTGTGTTTGTATATTTATTAATTTATTTTAATTTAATCCAAAACGTCGCG

mRNA sequence

GAGAGGAGAGGAGAAAAAGAAAGGAGAAGAAGAAGAACGTCGCCCGGCCGTGCTTTCCTTTTGTTCCGCCGCCGTCCGTCGCCGACCGCCTCGCCGTTGTTCCTCGTCGCCGTCTGCCACTTTAGCCATTATTATGTCATATCGACCATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGACGATTTAGATAATAACATCGCAGGAGGGTCATCATCTGTGGGCGACAATACGGAGTCTTCTTCTCAACAAACGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACAAGTGGAAGCTATGAAAAAGATGATTGAAGACCTAACTCGTGCACAACAGGGACCACCACATGATCCCTAGCTTCATTATGTTTATGTTTTTTCTATATTGAGAACTATATTTTGTTGTAGTCAACTTATTCGTATTATTAATTTTAATTCTATTTTTTTAATTTGTGTTTGTATATTTATTAATTTATTTTAATTTAATCCAAAACGTCGCG

Coding sequence (CDS)

ATGTCATATCGACCATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGACGATTTAGATAATAACATCGCAGGAGGGTCATCATCTGTGGGCGACAATACGGAGTCTTCTTCTCAACAAACGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACAAGTGGAAGCTATGAAAAAGATGATTGAAGACCTAACTCGTGCACAACAGGGACCACCACATGATCCCTAG

Protein sequence

MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPQVEAMKKMIEDLTRAQQGPPHDP

Homology

[Close]

BLAST of Cmc12g0322131 vs. NCBI nr
Match: TYK22506.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 163.7 bits (413), Expect = 8.7e-37
Identity = 84/92 (91.30%), Postives = 85/92 (92.39%), Query Frame = 0


Query: 1   MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 60
           MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE
Sbjct: 146 MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 205

Query: 61  RHVAINGRIPMTIAPGAEKPISPQVEAMKKMI 93
           RHVAINGRIPMTIAPGAEKPISP      + I
Sbjct: 206 RHVAINGRIPMTIAPGAEKPISPHAVRFSQAI 237

[Close]

BLAST of Cmc12g0322131 vs. NCBI nr
Match: TYK24683.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 163.7 bits (413), Expect = 8.7e-37
Identity = 84/92 (91.30%), Postives = 85/92 (92.39%), Query Frame = 0


Query: 1   MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 60
           MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE
Sbjct: 89  MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 148

Query: 61  RHVAINGRIPMTIAPGAEKPISPQVEAMKKMI 93
           RHVAINGRIPMTIAPGAEKPISP      + I
Sbjct: 149 RHVAINGRIPMTIAPGAEKPISPHAVRFSQAI 180

[Close]

BLAST of Cmc12g0322131 vs. NCBI nr
Match: TYK10126.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 163.7 bits (413), Expect = 8.7e-37
Identity = 84/92 (91.30%), Postives = 85/92 (92.39%), Query Frame = 0


Query: 1   MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 60
           MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE
Sbjct: 146 MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 205

Query: 61  RHVAINGRIPMTIAPGAEKPISPQVEAMKKMI 93
           RHVAINGRIPMTIAPGAEKPISP      + I
Sbjct: 206 RHVAINGRIPMTIAPGAEKPISPHAVRFSQAI 237

[Close]

BLAST of Cmc12g0322131 vs. NCBI nr
Match: TYK17218.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 163.7 bits (413), Expect = 8.7e-37
Identity = 84/92 (91.30%), Postives = 85/92 (92.39%), Query Frame = 0


Query: 1   MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 60
           MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE
Sbjct: 145 MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 204

Query: 61  RHVAINGRIPMTIAPGAEKPISPQVEAMKKMI 93
           RHVAINGRIPMTIAPGAEKPISP      + I
Sbjct: 205 RHVAINGRIPMTIAPGAEKPISPHAVRFSQAI 236

[Close]

BLAST of Cmc12g0322131 vs. NCBI nr
Match: KAA0044722.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 162.2 bits (409), Expect = 2.5e-36
Identity = 83/92 (90.22%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 1   MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 60
           MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE
Sbjct: 89  MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 148

Query: 61  RHVAINGRIPMTIAPGAEKPISPQVEAMKKMI 93
           RHVAINGRIPMTI PGAEKPISP      + I
Sbjct: 149 RHVAINGRIPMTIVPGAEKPISPHAVRFSQAI 180

[Close]

BLAST of Cmc12g0322131 vs. ExPASy TrEMBL
Match: A0A5D3DFY2 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00030 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.2e-37
Identity = 84/92 (91.30%), Postives = 85/92 (92.39%), Query Frame = 0


Query: 1   MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 60
           MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE
Sbjct: 146 MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 205

Query: 61  RHVAINGRIPMTIAPGAEKPISPQVEAMKKMI 93
           RHVAINGRIPMTIAPGAEKPISP      + I
Sbjct: 206 RHVAINGRIPMTIAPGAEKPISPHAVRFSQAI 237

[Close]

BLAST of Cmc12g0322131 vs. ExPASy TrEMBL
Match: A0A5D3CI90 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002690 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.2e-37
Identity = 84/92 (91.30%), Postives = 85/92 (92.39%), Query Frame = 0


Query: 1   MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 60
           MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE
Sbjct: 146 MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 205

Query: 61  RHVAINGRIPMTIAPGAEKPISPQVEAMKKMI 93
           RHVAINGRIPMTIAPGAEKPISP      + I
Sbjct: 206 RHVAINGRIPMTIAPGAEKPISPHAVRFSQAI 237

[Close]

BLAST of Cmc12g0322131 vs. ExPASy TrEMBL
Match: A0A5D3DM13 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002340 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.2e-37
Identity = 84/92 (91.30%), Postives = 85/92 (92.39%), Query Frame = 0


Query: 1   MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 60
           MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE
Sbjct: 89  MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 148

Query: 61  RHVAINGRIPMTIAPGAEKPISPQVEAMKKMI 93
           RHVAINGRIPMTIAPGAEKPISP      + I
Sbjct: 149 RHVAINGRIPMTIAPGAEKPISPHAVRFSQAI 180

[Close]

BLAST of Cmc12g0322131 vs. ExPASy TrEMBL
Match: A0A5D3D141 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00680 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.2e-37
Identity = 84/92 (91.30%), Postives = 85/92 (92.39%), Query Frame = 0


Query: 1   MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 60
           MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE
Sbjct: 145 MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 204

Query: 61  RHVAINGRIPMTIAPGAEKPISPQVEAMKKMI 93
           RHVAINGRIPMTIAPGAEKPISP      + I
Sbjct: 205 RHVAINGRIPMTIAPGAEKPISPHAVRFSQAI 236

[Close]

BLAST of Cmc12g0322131 vs. ExPASy TrEMBL
Match: A0A5A7TN27 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00060 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36
Identity = 83/92 (90.22%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 1   MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 60
           MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE
Sbjct: 89  MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLLELE 148

Query: 61  RHVAINGRIPMTIAPGAEKPISPQVEAMKKMI 93
           RHVAINGRIPMTI PGAEKPISP      + I
Sbjct: 149 RHVAINGRIPMTIVPGAEKPISPHAVRFSQAI 180

The following BLAST results are available for this feature:

BLAST of Cmc12g0322131 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK22506.1	8.7e-37	91.30	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK24683.1	8.7e-37	91.30	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK10126.1	8.7e-37	91.30	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK17218.1	8.7e-37	91.30	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0044722.1	2.5e-36	90.22	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc12g0322131 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc12g0322131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DFY2	4.2e-37	91.30	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3CI90	4.2e-37	91.30	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3DM13	4.2e-37	91.30	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3D141	4.2e-37	91.30	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7TN27	1.2e-36	90.22	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of Cmc12g0322131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0322131.1	Cmc12g0322131.1	mRNA