Cmc12g0321881 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0321881
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionrecQ-mediated genome instability protein 2
LocationCMiso1.1chr12: 9021501 .. 9024162 (+)
RNA-Seq ExpressionCmc12g0321881
SyntenyCmc12g0321881
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTATATAAAGAAGCTTTTTAAATTTAGAGCAATTTTGGAAGCAGCCGGACATGGACTACAGCCTAGCAGCCTTGAAGCTTCTATGCCGGCAGCTCAAAGACGCCCGCGGAACTCCGTCTCACGCCACCGCCACTCTTAGCGGCATTCTCTTCCAACGCGCCTGGCTTCAGGTCCTCTCTTCCACATCCTTCATTTCTCCCCGTTTCTCACTATCCTCTCTCTAATCAGAGTTCTCCCACCAGGGGATCTTGGTCTCCGTCGACAAAGAAAATGGTAAATTGATTCTCGACGATGGCACCGGCACCGTCGAGCTCTCCCTCCCTCGCAACTTCCTTCTCCGCCCTTGGAGCCTCGGTATTTGCCCTACTACTTCCCCATTCTCTTTTTGCTGCTGCATTTTGAGTTGGTTTCTCTCACTCTCTTTGTTTGTTTTTGTTCAGGGATGTACGTGATGGTTGTTGGCGCTTTTCTCTTCCGGACGAATGAACCGCCCTTTATTTCGGTGAGATTGAGATTTCATCCTTTCTTCCTTTTCTTCCTTATTAATGACTCTCTTGTGCTTGACATGTAGAGAAGAATTGAATTGTTTTTCCCCTGAACTTTTGTTTTCTTTTAAAGAGAAAATTAGGTGAAGAAACTTCTAAGACATCCTTGGTTGAAGATCATTGGTTTTCATCTATTGAGTTTTTTAAAAATACCTTTGGATGGGCATTTTCAAGGCCAGGGATTTCTTTATTCTCATTTCTCTATTACTTACATAGTTACATTTATGCAATATCCATTCAAAAGGACAAAGAAAATCCTTTGGGTTGATCATGTTCGAGCTTTCTTTTGAATCTTCGATTTGAATGCGAAGAGTGGTCTATGTTTCCTAACGAATTAAAATGTTCTGGAATGCGTAGTAAAAGATTCAAGTTTAGTTTTTGGATGATTGAACTGCATTTTCTTGAGACACTGGAATATTGATGGTTCCACTACTTGCCACAAATTTATCGAATCGGTTATTATTAAGATGTATGCATCCCTTTGAAGATTACAGCCTAACTTCTCATATTACGTGTTGGAAATTTTGTTCAGTATCAGTGAATTTCATTCAATCTATGAAATTTTTGTTGCCTTCTTAAAAGAATATATTCTCCGTAGTGCCATTTTTCGTGCTCTTTTTCTATTTTTATGAGTTTTGCCGATAAGCCAGCTGCCATAGAAGCATGTTGGTGGATTATTCGGTACTTTTCTTTTTCTTTTTTTTCATGGGGGGGGGAGCGGATTAGAAACAATTTCATTGATTGAATGAAAGATCTAATCCATGAAATTTCCAAGAGATACAAAATGAACCCATTTAATTGCAGGGTAGACAAGTTTTCTCCAATTTGCAAGGAAATTTAAACGGTCAATCTGTATCTGTATGCACTGTAGATTTTCATACCAAAATAGAGCATGGCAAACAACTAATTCAAGGACATCCTCAGAATATCTTTTTTTGACTTGAAAAGTTTTGTCGTCTCTCACATCCCAAAACTCCATAAAACCGCGCTTATCATACTTGACCATATTTGAGCCTTAGTAGCTTTGAAATGGTGATCTGTGAGAAACATGTTGATCCAATCAAGAGAGGCCAAAGAATCGTTCAGTATTTGCAGGTTTTTCTTTTAGTATTCAATAATATTGCTATTTCAATCTTAGAGATGGTTGACTCCACTTAATTTAAAGCAAGTTTAATCATATCAATTTCAGCATTTTATCTGTCTTTACCTCCTTTCTATTCATTTTTAAATACCACATCTTCATTTGCTGATATTCAACTTGTAGCTGTGAATCTGTGATGTTTTGTTTCATCAGCATTTTGTTTCCATATCCAATATTTAGGAGGAAAGATAGTGTTCATAACTAAATTACTTAATAGCATGGAGTTTTGGTTTGATATCTACCATCAACAAGTAGTTAATTCTACAATTTTATGTTTGTATTAGGTCCACAAGATTGTTGATCTTTCAAAGTCTCCTAATCGAGAGGCAATGTGGTATCTTGAAGTCATGGAAGCATACAAAATGTTCTATGAACCTCTGGTTGAAGAGTTTTTGTAACTTGTTTTGTCGACCTAAAAGGTGTTGATTATTTTATTTTCATGTTAATCCTGCTATGAAAAATGCATCAATTTCTTGTAATCCTACAAATGGGTTATGATGGTCTTTCGATCTTGTAAGATCACAACTCAAGTAGAGAATCCGAGTATTATCCTCTCCTTTGGTAGGCATAATTTTGAAAACACAAGTAGATAAGGATAAGCAGATAGGAAAGCCAATCCTCTTGCTTTGTGTATCTGATGATGTCAAAGAGAATTTTGTGATATACGTACACCATAGTAATTGGGGTTAATTCTCGGTTTAATGTTTTAGTTTCTTGTCAGTAGTTTTAAGTACTTGGTCAGTAAATACCCTATTAATGGAGGTTTTTTCGGCATGTAATTGGTAACTTTTTGATGTAGGATATATATACCTTCCATAGGGAGATATATGGAGAATCCTTGGATTGGGCCTAAAATGCACACATCACAAAACTTGTAAAGATATTCAGATTGTAGATTGTATTTCATTTAAAGGGGATGTTTGTTTGCTTACCACATACTTCTCTCTTTGGGTGCCTATAATTCATGAAAGGGGT

mRNA sequence

TTTATATAAAGAAGCTTTTTAAATTTAGAGCAATTTTGGAAGCAGCCGGACATGGACTACAGCCTAGCAGCCTTGAAGCTTCTATGCCGGCAGCTCAAAGACGCCCGCGGAACTCCGTCTCACGCCACCGCCACTCTTAGCGGCATTCTCTTCCAACGCGCCTGGCTTCAGGGGATCTTGGTCTCCGTCGACAAAGAAAATGGTAAATTGATTCTCGACGATGGCACCGGCACCGTCGAGCTCTCCCTCCCTCGCAACTTCCTTCTCCGCCCTTGGAGCCTCGGGATGTACGTGATGGTTGTTGGCGCTTTTCTCTTCCGGACGAATGAACCGCCCTTTATTTCGGTCCACAAGATTGTTGATCTTTCAAAGTCTCCTAATCGAGAGGCAATGTGGTATCTTGAAGTCATGGAAGCATACAAAATGTTCTATGAACCTCTGGTTGAAGAGTTTTTGTAACTTGTTTTGTCGACCTAAAAGGTGTTGATTATTTTATTTTCATGTTAATCCTGCTATGAAAAATGCATCAATTTCTTGTAATCCTACAAATGGGTTATGATGGTCTTTCGATCTTGTAAGATCACAACTCAAGTAGAGAATCCGAGTATTATCCTCTCCTTTGGTAGGCATAATTTTGAAAACACAAGTAGATAAGGATAAGCAGATAGGAAAGCCAATCCTCTTGCTTTGTGTATCTGATGATGTCAAAGAGAATTTTGTGATATACGTACACCATAGTAATTGGGGTTAATTCTCGGTTTAATGTTTTAGTTTCTTGTCAGTAGTTTTAAGTACTTGGTCAGTAAATACCCTATTAATGGAGGTTTTTTCGGCATGTAATTGGTAACTTTTTGATGTAGGATATATATACCTTCCATAGGGAGATATATGGAGAATCCTTGGATTGGGCCTAAAATGCACACATCACAAAACTTGTAAAGATATTCAGATTGTAGATTGTATTTCATTTAAAGGGGATGTTTGTTTGCTTACCACATACTTCTCTCTTTGGGTGCCTATAATTCATGAAAGGGGT

Coding sequence (CDS)

ATGGACTACAGCCTAGCAGCCTTGAAGCTTCTATGCCGGCAGCTCAAAGACGCCCGCGGAACTCCGTCTCACGCCACCGCCACTCTTAGCGGCATTCTCTTCCAACGCGCCTGGCTTCAGGGGATCTTGGTCTCCGTCGACAAAGAAAATGGTAAATTGATTCTCGACGATGGCACCGGCACCGTCGAGCTCTCCCTCCCTCGCAACTTCCTTCTCCGCCCTTGGAGCCTCGGGATGTACGTGATGGTTGTTGGCGCTTTTCTCTTCCGGACGAATGAACCGCCCTTTATTTCGGTCCACAAGATTGTTGATCTTTCAAAGTCTCCTAATCGAGAGGCAATGTGGTATCTTGAAGTCATGGAAGCATACAAAATGTTCTATGAACCTCTGGTTGAAGAGTTTTTGTAA

Protein sequence

MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL
Homology
[Close]
BLAST of Cmc12g0321881 vs. NCBI nr
Match: XP_008462275.1 (PREDICTED: recQ-mediated genome instability protein 2 [Cucumis melo] >KAA0052096.1 recQ-mediated genome instability protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 274.2 bits (700), Expect = 5.8e-70
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTG 60
           MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTG
Sbjct: 1   MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTG 60

Query: 61  TVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVM 120
           TVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVM
Sbjct: 61  TVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVM 120

Query: 121 EAYKMFYEPLVEEFL 136
           EAYKMFYEPLVEEFL
Sbjct: 121 EAYKMFYEPLVEEFL 135

[Close]
BLAST of Cmc12g0321881 vs. NCBI nr
Match: XP_004139456.1 (recQ-mediated genome instability protein 2 isoform X2 [Cucumis sativus] >KGN64872.1 hypothetical protein Csa_022713 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 5.3e-63
Identity = 123/135 (91.11%), Postives = 127/135 (94.07%), Query Frame = 0 

Query: 1   MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTG 60
           MDYSL ALKLLCRQLKDARGTPSH TA L GILFQRAWLQGILVSVDKENGKLILDD TG
Sbjct: 1   MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATG 60

Query: 61  TVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVM 120
           TVELSL R+FLLRPWSLGMYVMVVGAFLFRTNE PFI VHKI+DLSKSPNREAMWYLEVM
Sbjct: 61  TVELSLSRDFLLRPWSLGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVM 120

Query: 121 EAYKMFYEPLVEEFL 136
           EAYK+FYEPLVE+FL
Sbjct: 121 EAYKLFYEPLVEDFL 135

[Close]
BLAST of Cmc12g0321881 vs. NCBI nr
Match: XP_031736186.1 (recQ-mediated genome instability protein 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 2.3e-58
Identity = 123/164 (75.00%), Postives = 127/164 (77.44%), Query Frame = 0 

Query: 1   MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTG 60
           MDYSL ALKLLCRQLKDARGTPSH TA L GILFQRAWLQGILVSVDKENGKLILDD TG
Sbjct: 1   MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATG 60

Query: 61  TVELSLPRNFLLRPWSL-----------------------------GMYVMVVGAFLFRT 120
           TVELSL R+FLLRPWSL                             GMYVMVVGAFLFRT
Sbjct: 61  TVELSLSRDFLLRPWSLGIFPTTSPFSFLLLHFELDSLAFFFCFCSGMYVMVVGAFLFRT 120

Query: 121 NEPPFISVHKIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL 136
           NE PFI VHKI+DLSKSPNREAMWYLEVMEAYK+FYEPLVE+FL
Sbjct: 121 NELPFIVVHKIIDLSKSPNREAMWYLEVMEAYKLFYEPLVEDFL 164

[Close]
BLAST of Cmc12g0321881 vs. NCBI nr
Match: XP_038894076.1 (uncharacterized protein LOC120082820 [Benincasa hispida])

HSP 1 Score: 232.6 bits (592), Expect = 1.9e-57
Identity = 114/134 (85.07%), Postives = 123/134 (91.79%), Query Frame = 0 

Query: 1   MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTG 60
           MDYSLAALKLLCRQLKDAR +P++  ATL GILFQRAWLQG LVSVDKEN KLILDDGTG
Sbjct: 1   MDYSLAALKLLCRQLKDARQSPTNNAATLGGILFQRAWLQGNLVSVDKENAKLILDDGTG 60

Query: 61  TVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVM 120
           TVELSL R+F LRPW LGMYVMVVGAF+FRTNEPP I+VHKIVDLSK P+REAMWYLEV+
Sbjct: 61  TVELSLSRDFRLRPWILGMYVMVVGAFVFRTNEPPVIAVHKIVDLSKFPDREAMWYLEVV 120

Query: 121 EAYKMFYEPLVEEF 135
           EAYKMFYEPL+EEF
Sbjct: 121 EAYKMFYEPLIEEF 134

[Close]
BLAST of Cmc12g0321881 vs. NCBI nr
Match: XP_022152884.1 (recQ-mediated genome instability protein 2 isoform X1 [Momordica charantia] >XP_022152885.1 recQ-mediated genome instability protein 2 isoform X1 [Momordica charantia])

HSP 1 Score: 223.8 bits (569), Expect = 9.0e-55
Identity = 109/135 (80.74%), Postives = 118/135 (87.41%), Query Frame = 0 

Query: 1   MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTG 60
           MDYSLAALK+LC QL  AR TPS   ATL GILFQRAWLQGILVSVDK N +L+LDDGTG
Sbjct: 1   MDYSLAALKVLCAQLTGARPTPSQHAATLGGILFQRAWLQGILVSVDKHNARLVLDDGTG 60

Query: 61  TVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVM 120
           TVELSL R+F LRPW+LGMYVMVVGAF+ R NEPP I VHKIVDLS+ P+REAMWYLEVM
Sbjct: 61  TVELSLSRDFRLRPWNLGMYVMVVGAFVIRPNEPPIIGVHKIVDLSEFPSREAMWYLEVM 120

Query: 121 EAYKMFYEPLVEEFL 136
           EAYKMFYEPL+EEFL
Sbjct: 121 EAYKMFYEPLIEEFL 135

[Close]
BLAST of Cmc12g0321881 vs. ExPASy Swiss-Prot
Match: Q96E14 (RecQ-mediated genome instability protein 2 OS=Homo sapiens OX=9606 GN=RMI2 PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 6.2e-06
Identity = 44/124 (35.48%), Postives = 62/124 (50.00%), Query Frame = 0 

Query: 8   LKLLCRQL-KDARGTP-----SHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGT 67
           LK+L  QL +DA G P     S A A    +     W+QG +V  D+   +L    G  +
Sbjct: 23  LKVLAEQLRRDAEGGPGAWRLSRAAAGRGPLDLAAVWMQGRVVMADRGEARLRDPSGDFS 82

Query: 68  VELSLPRNFLLRPWSL-GMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVM 125
           V   L R    RP  + G YVMV+G     + EP   +V K+ DLS +P  E+MW LEV 
Sbjct: 83  VR-GLERVPRGRPCLVPGKYVMVMGVVQACSPEPCLQAV-KMTDLSDNPIHESMWELEVE 142

[Close]
BLAST of Cmc12g0321881 vs. ExPASy Swiss-Prot
Match: Q5ZM20 (RecQ-mediated genome instability protein 2 OS=Gallus gallus OX=9031 GN=RMI2 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.4e-05
Identity = 45/132 (34.09%), Postives = 67/132 (50.76%), Query Frame = 0 

Query: 8   LKLLCRQLKDARGTPSHATATLS-------GILFQRAWLQGILVSVDK-ENGKLILDDGT 67
           LK+L  QL+ A G  +  T  LS        +  +  W+QG ++ V++   G   L DG+
Sbjct: 10  LKVLAAQLR-AAGRGAGGTWRLSRTETGRAPLCLRAVWMQGTVLQVERGGGGSARLRDGS 69

Query: 68  GTVEL----SLPRNFLLRP-WSLGMYVMVVGAFLFRTNEP-PFISVHKIVDLSKSPNREA 126
           G   +     +PR    RP  S G YVMV+G  + R   P P +   K+ DLS++P  E 
Sbjct: 70  GHFTVLGVEDVPRG---RPCLSAGKYVMVMG--MVRACSPEPVLRAIKMTDLSENPVHEE 129

[Close]
BLAST of Cmc12g0321881 vs. ExPASy Swiss-Prot
Match: A5PJU7 (RecQ-mediated genome instability protein 2 OS=Bos taurus OX=9913 GN=RMI2 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 8.9e-05
Identity = 42/128 (32.81%), Postives = 64/128 (50.00%), Query Frame = 0 

Query: 8   LKLLCRQL-KDARGTP-----SHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGT 67
           +K+L  QL +DA G P     S A      +  +  W+QG +  V+   G   L D +G+
Sbjct: 24  IKVLAEQLRRDAEGGPGSWRLSRAAVGREPLELRAVWMQGTV--VEAGGGVARLRDPSGS 83

Query: 68  VEL-SLPRNFLLRPWSL-GMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEV 127
             +  L R    RP  + G YVMV+G     + EP   +V K+ DLS +P  E++W LEV
Sbjct: 84  FSVRGLERVPRGRPCLVPGKYVMVMGVIQACSPEPCLQAV-KMTDLSDNPLHESLWELEV 143

[Close]
BLAST of Cmc12g0321881 vs. ExPASy TrEMBL
Match: A0A5A7UD07 (RecQ-mediated genome instability protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00780 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.8e-70
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTG 60
           MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTG
Sbjct: 1   MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTG 60

Query: 61  TVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVM 120
           TVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVM
Sbjct: 61  TVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVM 120

Query: 121 EAYKMFYEPLVEEFL 136
           EAYKMFYEPLVEEFL
Sbjct: 121 EAYKMFYEPLVEEFL 135

[Close]
BLAST of Cmc12g0321881 vs. ExPASy TrEMBL
Match: A0A1S3CGI5 (recQ-mediated genome instability protein 2 OS=Cucumis melo OX=3656 GN=LOC103500657 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.8e-70
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTG 60
           MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTG
Sbjct: 1   MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTG 60

Query: 61  TVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVM 120
           TVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVM
Sbjct: 61  TVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVM 120

Query: 121 EAYKMFYEPLVEEFL 136
           EAYKMFYEPLVEEFL
Sbjct: 121 EAYKMFYEPLVEEFL 135

[Close]
BLAST of Cmc12g0321881 vs. ExPASy TrEMBL
Match: A0A0A0LVL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G137780 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.6e-63
Identity = 123/135 (91.11%), Postives = 127/135 (94.07%), Query Frame = 0 

Query: 1   MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTG 60
           MDYSL ALKLLCRQLKDARGTPSH TA L GILFQRAWLQGILVSVDKENGKLILDD TG
Sbjct: 1   MDYSLGALKLLCRQLKDARGTPSHPTANLGGILFQRAWLQGILVSVDKENGKLILDDATG 60

Query: 61  TVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVM 120
           TVELSL R+FLLRPWSLGMYVMVVGAFLFRTNE PFI VHKI+DLSKSPNREAMWYLEVM
Sbjct: 61  TVELSLSRDFLLRPWSLGMYVMVVGAFLFRTNELPFIVVHKIIDLSKSPNREAMWYLEVM 120

Query: 121 EAYKMFYEPLVEEFL 136
           EAYK+FYEPLVE+FL
Sbjct: 121 EAYKLFYEPLVEDFL 135

[Close]
BLAST of Cmc12g0321881 vs. ExPASy TrEMBL
Match: A0A6J1DF83 (recQ-mediated genome instability protein 2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020510 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.4e-55
Identity = 109/135 (80.74%), Postives = 118/135 (87.41%), Query Frame = 0 

Query: 1   MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTG 60
           MDYSLAALK+LC QL  AR TPS   ATL GILFQRAWLQGILVSVDK N +L+LDDGTG
Sbjct: 1   MDYSLAALKVLCAQLTGARPTPSQHAATLGGILFQRAWLQGILVSVDKHNARLVLDDGTG 60

Query: 61  TVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVM 120
           TVELSL R+F LRPW+LGMYVMVVGAF+ R NEPP I VHKIVDLS+ P+REAMWYLEVM
Sbjct: 61  TVELSLSRDFRLRPWNLGMYVMVVGAFVIRPNEPPIIGVHKIVDLSEFPSREAMWYLEVM 120

Query: 121 EAYKMFYEPLVEEFL 136
           EAYKMFYEPL+EEFL
Sbjct: 121 EAYKMFYEPLIEEFL 135

[Close]
BLAST of Cmc12g0321881 vs. ExPASy TrEMBL
Match: A0A6J1I0C8 (uncharacterized protein LOC111469342 OS=Cucurbita maxima OX=3661 GN=LOC111469342 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 7.5e-55
Identity = 110/134 (82.09%), Postives = 118/134 (88.06%), Query Frame = 0 

Query: 1   MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTG 60
           MDY+LAALKLLCRQL DAR  PS+  ATL GILFQRAWLQGILV VD++NGKLILDDGTG
Sbjct: 1   MDYNLAALKLLCRQLNDARQAPSNNAATLGGILFQRAWLQGILVFVDRDNGKLILDDGTG 60

Query: 61  TVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVM 120
           TVELSL  +F  RPWSLGMYVMVVGA++ RTNEP  I+VHKIVDLSK P REAMWYLEVM
Sbjct: 61  TVELSLSGDFRQRPWSLGMYVMVVGAYVVRTNEPSIIAVHKIVDLSKFPGREAMWYLEVM 120

Query: 121 EAYKMFYEPLVEEF 135
           EAYKMFYEPLVEEF
Sbjct: 121 EAYKMFYEPLVEEF 134

[Close]
BLAST of Cmc12g0321881 vs. TAIR 10
Match: AT1G08390.1 (unknown protein; Has 62 Blast hits to 62 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 179.1 bits (453), Expect = 2.4e-45
Identity = 85/136 (62.50%), Postives = 105/136 (77.21%), Query Frame = 0 

Query: 1   MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGK--LILDDG 60
           MDYSLAA+K+LC QL+DA+ TPS   A+L G+LFQRAWLQG+LV      G   L+LDDG
Sbjct: 1   MDYSLAAVKMLCSQLRDAKPTPSQNAASLGGVLFQRAWLQGVLVPFSGGGGDNCLVLDDG 60

Query: 61  TGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLE 120
           TG +EL L  +F LR W  GMYVMVVG +  RT + P + VHK+VDLS SP+REAMWYLE
Sbjct: 61  TGLLELGLTNDFALRQWKSGMYVMVVGVYQVRTGQIPLLKVHKMVDLSVSPDREAMWYLE 120

Query: 121 VMEAYKMFYEPLVEEF 135
           VM+AY++FYEPL++EF
Sbjct: 121 VMDAYRLFYEPLIQEF 136

The following BLAST results are available for this feature:
BLAST of Cmc12g0321881 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008462275.15.8e-70100.00PREDICTED: recQ-mediated genome instability protein 2 [Cucumis melo] >KAA0052096... [more]
XP_004139456.15.3e-6391.11recQ-mediated genome instability protein 2 isoform X2 [Cucumis sativus] >KGN6487... [more]
XP_031736186.12.3e-5875.00recQ-mediated genome instability protein 2 isoform X1 [Cucumis sativus][more]
XP_038894076.11.9e-5785.07uncharacterized protein LOC120082820 [Benincasa hispida][more]
XP_022152884.19.0e-5580.74recQ-mediated genome instability protein 2 isoform X1 [Momordica charantia] >XP_... [more]
BLAST of Cmc12g0321881 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q96E146.2e-0635.48RecQ-mediated genome instability protein 2 OS=Homo sapiens OX=9606 GN=RMI2 PE=1 ... [more]
Q5ZM201.4e-0534.09RecQ-mediated genome instability protein 2 OS=Gallus gallus OX=9031 GN=RMI2 PE=2... [more]
A5PJU78.9e-0532.81RecQ-mediated genome instability protein 2 OS=Bos taurus OX=9913 GN=RMI2 PE=2 SV... [more]
BLAST of Cmc12g0321881 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UD072.8e-70100.00RecQ-mediated genome instability protein 2 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A1S3CGI52.8e-70100.00recQ-mediated genome instability protein 2 OS=Cucumis melo OX=3656 GN=LOC1035006... [more]
A0A0A0LVL52.6e-6391.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G137780 PE=4 SV=1[more]
A0A6J1DF834.4e-5580.74recQ-mediated genome instability protein 2 isoform X1 OS=Momordica charantia OX=... [more]
A0A6J1I0C87.5e-5582.09uncharacterized protein LOC111469342 OS=Cucurbita maxima OX=3661 GN=LOC111469342... [more]
BLAST of Cmc12g0321881 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G08390.12.4e-4562.50unknown protein; Has 62 Blast hits to 62 proteins in 27 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032245RecQ-mediated genome instability protein 2PFAMPF16100RMI2coord: 6..123
e-value: 1.0E-33
score: 116.0
IPR032245RecQ-mediated genome instability protein 2PANTHERPTHR33962RECQ-MEDIATED GENOME INSTABILITY PROTEIN 2 RMI2coord: 1..133
NoneNo IPR availableGENE3D2.40.50.140coord: 4..126
e-value: 1.2E-32
score: 114.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0321881.1Cmc12g0321881.1mRNA