Cmc12g0321681 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0321681
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
LocationCMiso1.1chr12: 8746145 .. 8747029 (-)
RNA-Seq ExpressionCmc12g0321681
SyntenyCmc12g0321681
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAACTAGTTAACGAAATGTTAGTTTCAGTGATCATAAGGCCAAGCGCAAGCCCCTACTCAAGCCTAGTGTTGTTGGTCAAGAAAAAGGACGGCAGCTGGAGATTCTATGTCGATTACCGAGCCTTGAATAATGTCACGATCCCAGATAAATTTCCAATCCCAGTAGTGGAAGAATTATTTGACGAATTAGGAGGAGCTTCACTATTTTCTAAGATCGATTTGAAAGCAGGGTATCATCAAATCCGAATGGTAGACAGGGATATTGAGAAGACAACCTTCCGAACACACAAAGGACATTATGAATTCCTAGTGATGCCTTTCGAACTCACTAACGCGCCAGCTACCTTCCAATCCTTAATGAACTCTATCTTCAGACCATACTTGAGAAAATTTGTCCTCATTTTCTTTGATGACATACTGATCTACAGCCGAAATTGGGAAGATCATTTAAAACACATGGAGATTGTTTTCTTGGTGTTGCGAAAACACGAGTTGTTTGCAAACCGGAAGAAATGCAGTTTTGGATTAGCTAAAGTAGAGTACCTGGGACACCTCATATCAAGCAAGGGTGTCGAAGTGGATCCAAAAAAAATTAAAGCCATAACTAAGTGGCCTAAACCAACAAATGTATGTGAAACTCGAGGTTTCCTTGGGCTGACTGGATACTATAGAAAATTCGTACACCATTATGCCACCTTAGCAGCCCCACTAACCCAACTACTAAAGAAGGGAGGGTTTAAATGGAATGCTGAAGCAGAACAGGCTTTTGAGAAGCTCAAGGAAGCAATGATAGCCTTACCGGTATTAGCCTTGCCTATGTTTGATAAACCATTCGAGATCGAAACTGACGCTTCAGGGTATAGAGTGGGAGCTGTCTGA

mRNA sequence

ATGGAAAAACTAGTTAACGAAATGTTAGTTTCAGTGATCATAAGGCCAAGCGCAAGCCCCTACTCAAGCCTAGTGTTGTTGGTCAAGAAAAAGGACGGCAGCTGGAGATTCTATGTCGATTACCGAGCCTTGAATAATGTCACGATCCCAGATAAATTTCCAATCCCAGTAGTGGAAGAATTATTTGACGAATTAGGAGGAGCTTCACTATTTTCTAAGATCGATTTGAAAGCAGGGTATCATCAAATCCGAATGGTAGACAGGGATATTGAGAAGACAACCTTCCGAACACACAAAGGACATTATGAATTCCTAGTGATGCCTTTCGAACTCACTAACGCGCCAGCTACCTTCCAATCCTTAATGAACTCTATCTTCAGACCATACTTGAGAAAATTTGTCCTCATTTTCTTTGATGACATACTGATCTACAGCCGAAATTGGGAAGATCATTTAAAACACATGGAGATTGTTTTCTTGGTGTTGCGAAAACACGAGTTGTTTGCAAACCGGAAGAAATGCAGTTTTGGATTAGCTAAAGTAGAGTACCTGGGACACCTCATATCAAGCAAGGGTGTCGAAGTGGATCCAAAAAAAATTAAAGCCATAACTAAGTGGCCTAAACCAACAAATGTATGTGAAACTCGAGGTTTCCTTGGGCTGACTGGATACTATAGAAAATTCGTACACCATTATGCCACCTTAGCAGCCCCACTAACCCAACTACTAAAGAAGGGAGGGTTTAAATGGAATGCTGAAGCAGAACAGGCTTTTGAGAAGCTCAAGGAAGCAATGATAGCCTTACCGGTATTAGCCTTGCCTATGTTTGATAAACCATTCGAGATCGAAACTGACGCTTCAGGGTATAGAGTGGGAGCTGTCTGA

Coding sequence (CDS)

ATGGAAAAACTAGTTAACGAAATGTTAGTTTCAGTGATCATAAGGCCAAGCGCAAGCCCCTACTCAAGCCTAGTGTTGTTGGTCAAGAAAAAGGACGGCAGCTGGAGATTCTATGTCGATTACCGAGCCTTGAATAATGTCACGATCCCAGATAAATTTCCAATCCCAGTAGTGGAAGAATTATTTGACGAATTAGGAGGAGCTTCACTATTTTCTAAGATCGATTTGAAAGCAGGGTATCATCAAATCCGAATGGTAGACAGGGATATTGAGAAGACAACCTTCCGAACACACAAAGGACATTATGAATTCCTAGTGATGCCTTTCGAACTCACTAACGCGCCAGCTACCTTCCAATCCTTAATGAACTCTATCTTCAGACCATACTTGAGAAAATTTGTCCTCATTTTCTTTGATGACATACTGATCTACAGCCGAAATTGGGAAGATCATTTAAAACACATGGAGATTGTTTTCTTGGTGTTGCGAAAACACGAGTTGTTTGCAAACCGGAAGAAATGCAGTTTTGGATTAGCTAAAGTAGAGTACCTGGGACACCTCATATCAAGCAAGGGTGTCGAAGTGGATCCAAAAAAAATTAAAGCCATAACTAAGTGGCCTAAACCAACAAATGTATGTGAAACTCGAGGTTTCCTTGGGCTGACTGGATACTATAGAAAATTCGTACACCATTATGCCACCTTAGCAGCCCCACTAACCCAACTACTAAAGAAGGGAGGGTTTAAATGGAATGCTGAAGCAGAACAGGCTTTTGAGAAGCTCAAGGAAGCAATGATAGCCTTACCGGTATTAGCCTTGCCTATGTTTGATAAACCATTCGAGATCGAAACTGACGCTTCAGGGTATAGAGTGGGAGCTGTCTGA

Protein sequence

MEKLVNEMLVSVIIRPSASPYSSLVLLVKKKDGSWRFYVDYRALNNVTIPDKFPIPVVEELFDELGGASLFSKIDLKAGYHQIRMVDRDIEKTTFRTHKGHYEFLVMPFELTNAPATFQSLMNSIFRPYLRKFVLIFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAKVEYLGHLISSKGVEVDPKKIKAITKWPKPTNVCETRGFLGLTGYYRKFVHHYATLAAPLTQLLKKGGFKWNAEAEQAFEKLKEAMIALPVLALPMFDKPFEIETDASGYRVGAV
Homology
BLAST of Cmc12g0321681 vs. NCBI nr
Match: KAA0065392.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 565.1 bits (1455), Expect = 3.6e-157
Identity = 276/294 (93.88%), Postives = 284/294 (96.60%), Query Frame = 0

Query: 1   MEKLVNEMLVSVIIRPSASPYSSLVLLVKKKDGSWRFYVDYRALNNVTIPDKFPIPVVEE 60
           MEKLVNEMLVS IIRPSASPYSS VLLVKKKDGSWRF VDYRALNNVT+PDKFPIPVVEE
Sbjct: 648 MEKLVNEMLVSGIIRPSASPYSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 707

Query: 61  LFDELGGASLFSKIDLKAGYHQIRMVDRDIEKTTFRTHKGHYEFLVMPFELTNAPATFQS 120
           LFDELGGASLF+KIDLKAGYHQIRMVD DIEKT FRTH+GHYEFLVMPF LTNAPATFQS
Sbjct: 708 LFDELGGASLFTKIDLKAGYHQIRMVDGDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQS 767

Query: 121 LMNSIFRPYLRKFVLIFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 180
           LMNSIFRPYLRKFVL+FFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK
Sbjct: 768 LMNSIFRPYLRKFVLVFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 827

Query: 181 VEYLGHLISSKGVEVDPKKIKAITKWPKPTNVCETRGFLGLTGYYRKFVHHYATLAAPLT 240
           VEYLGHLIS+KGVEVDP+KIKAIT WPKPTNV ETRGFLGLTGYYRKFVHHY TLAAPLT
Sbjct: 828 VEYLGHLISNKGVEVDPEKIKAITNWPKPTNVRETRGFLGLTGYYRKFVHHYGTLAAPLT 887

Query: 241 QLLKKGGFKWNAEAEQAFEKLKEAMIALPVLALPMFDKPFEIETDASGYRVGAV 295
           QLLKKGGFKWNAEAEQAFEKLKEAMIALP+LALPMFDKPFEIETDASGY +GAV
Sbjct: 888 QLLKKGGFKWNAEAEQAFEKLKEAMIALPILALPMFDKPFEIETDASGYGIGAV 941

BLAST of Cmc12g0321681 vs. NCBI nr
Match: KAA0048423.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 565.1 bits (1455), Expect = 3.6e-157
Identity = 276/294 (93.88%), Postives = 284/294 (96.60%), Query Frame = 0

Query: 1   MEKLVNEMLVSVIIRPSASPYSSLVLLVKKKDGSWRFYVDYRALNNVTIPDKFPIPVVEE 60
           MEKLVNEMLVS IIRPSASPYSS VLLVKKKDGSWRF VDYRALNNVT+PDKFPIPVVEE
Sbjct: 648 MEKLVNEMLVSGIIRPSASPYSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 707

Query: 61  LFDELGGASLFSKIDLKAGYHQIRMVDRDIEKTTFRTHKGHYEFLVMPFELTNAPATFQS 120
           LFDELGGASLF+KIDLKAGYHQIRMVD DIEKT FRTH+GHYEFLVMPF LTNAPATFQS
Sbjct: 708 LFDELGGASLFTKIDLKAGYHQIRMVDGDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQS 767

Query: 121 LMNSIFRPYLRKFVLIFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 180
           LMNSIFRPYLRKFVL+FFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK
Sbjct: 768 LMNSIFRPYLRKFVLVFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 827

Query: 181 VEYLGHLISSKGVEVDPKKIKAITKWPKPTNVCETRGFLGLTGYYRKFVHHYATLAAPLT 240
           VEYLGHLIS+KGVEVDP+KIKAIT WPKPTNV ETRGFLGLTGYYRKFVHHY TLAAPLT
Sbjct: 828 VEYLGHLISNKGVEVDPEKIKAITNWPKPTNVRETRGFLGLTGYYRKFVHHYGTLAAPLT 887

Query: 241 QLLKKGGFKWNAEAEQAFEKLKEAMIALPVLALPMFDKPFEIETDASGYRVGAV 295
           QLLKKGGFKWNAEAEQAFEKLKEAMIALP+LALPMFDKPFEIETDASGY +GAV
Sbjct: 888 QLLKKGGFKWNAEAEQAFEKLKEAMIALPILALPMFDKPFEIETDASGYGIGAV 941

BLAST of Cmc12g0321681 vs. NCBI nr
Match: TYK30083.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 565.1 bits (1455), Expect = 3.6e-157
Identity = 276/294 (93.88%), Postives = 284/294 (96.60%), Query Frame = 0

Query: 1   MEKLVNEMLVSVIIRPSASPYSSLVLLVKKKDGSWRFYVDYRALNNVTIPDKFPIPVVEE 60
           MEKLVNEMLVS IIRPSASPYSS VLLVKKKDGSWRF VDYRALNNVT+PDKFPIPVVEE
Sbjct: 648 MEKLVNEMLVSGIIRPSASPYSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 707

Query: 61  LFDELGGASLFSKIDLKAGYHQIRMVDRDIEKTTFRTHKGHYEFLVMPFELTNAPATFQS 120
           LFDELGGASLF+KIDLKAGYHQIRMVD DIEKT FRTH+GHYEFLVMPF LTNAPATFQS
Sbjct: 708 LFDELGGASLFTKIDLKAGYHQIRMVDGDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQS 767

Query: 121 LMNSIFRPYLRKFVLIFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 180
           LMNSIFRPYLRKFVL+FFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK
Sbjct: 768 LMNSIFRPYLRKFVLVFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 827

Query: 181 VEYLGHLISSKGVEVDPKKIKAITKWPKPTNVCETRGFLGLTGYYRKFVHHYATLAAPLT 240
           VEYLGHLIS+KGVEVDP+KIKAIT WPKPTNV ETRGFLGLTGYYRKFVHHY TLAAPLT
Sbjct: 828 VEYLGHLISNKGVEVDPEKIKAITNWPKPTNVRETRGFLGLTGYYRKFVHHYGTLAAPLT 887

Query: 241 QLLKKGGFKWNAEAEQAFEKLKEAMIALPVLALPMFDKPFEIETDASGYRVGAV 295
           QLLKKGGFKWNAEAEQAFEKLKEAMIALP+LALPMFDKPFEIETDASGY +GAV
Sbjct: 888 QLLKKGGFKWNAEAEQAFEKLKEAMIALPILALPMFDKPFEIETDASGYGIGAV 941

BLAST of Cmc12g0321681 vs. NCBI nr
Match: KAA0032454.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ99900.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 565.1 bits (1455), Expect = 3.6e-157
Identity = 276/294 (93.88%), Postives = 284/294 (96.60%), Query Frame = 0

Query: 1   MEKLVNEMLVSVIIRPSASPYSSLVLLVKKKDGSWRFYVDYRALNNVTIPDKFPIPVVEE 60
           MEKLVNEMLVS IIRPSASPYSS VLLVKKKDGSWRF VDYRALNNVT+PDKFPIPVVEE
Sbjct: 648 MEKLVNEMLVSGIIRPSASPYSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 707

Query: 61  LFDELGGASLFSKIDLKAGYHQIRMVDRDIEKTTFRTHKGHYEFLVMPFELTNAPATFQS 120
           LFDELGGASLF+KIDLKAGYHQIRMVD DIEKT FRTH+GHYEFLVMPF LTNAPATFQS
Sbjct: 708 LFDELGGASLFTKIDLKAGYHQIRMVDGDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQS 767

Query: 121 LMNSIFRPYLRKFVLIFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 180
           LMNSIFRPYLRKFVL+FFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK
Sbjct: 768 LMNSIFRPYLRKFVLVFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 827

Query: 181 VEYLGHLISSKGVEVDPKKIKAITKWPKPTNVCETRGFLGLTGYYRKFVHHYATLAAPLT 240
           VEYLGHLIS+KGVEVDP+KIKAIT WPKPTNV ETRGFLGLTGYYRKFVHHY TLAAPLT
Sbjct: 828 VEYLGHLISNKGVEVDPEKIKAITNWPKPTNVRETRGFLGLTGYYRKFVHHYGTLAAPLT 887

Query: 241 QLLKKGGFKWNAEAEQAFEKLKEAMIALPVLALPMFDKPFEIETDASGYRVGAV 295
           QLLKKGGFKWNAEAEQAFEKLKEAMIALP+LALPMFDKPFEIETDASGY +GAV
Sbjct: 888 QLLKKGGFKWNAEAEQAFEKLKEAMIALPILALPMFDKPFEIETDASGYGIGAV 941

BLAST of Cmc12g0321681 vs. NCBI nr
Match: TYK22240.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 565.1 bits (1455), Expect = 3.6e-157
Identity = 276/294 (93.88%), Postives = 284/294 (96.60%), Query Frame = 0

Query: 1   MEKLVNEMLVSVIIRPSASPYSSLVLLVKKKDGSWRFYVDYRALNNVTIPDKFPIPVVEE 60
           MEKLVNEMLVS IIRPSASPYSS VLLVKKKDGSWRF VDYRALNNVT+PDKFPIPVVEE
Sbjct: 648 MEKLVNEMLVSGIIRPSASPYSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 707

Query: 61  LFDELGGASLFSKIDLKAGYHQIRMVDRDIEKTTFRTHKGHYEFLVMPFELTNAPATFQS 120
           LFDELGGASLF+KIDLKAGYHQIRMVD DIEKT FRTH+GHYEFLVMPF LTNAPATFQS
Sbjct: 708 LFDELGGASLFTKIDLKAGYHQIRMVDGDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQS 767

Query: 121 LMNSIFRPYLRKFVLIFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 180
           LMNSIFRPYLRKFVL+FFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK
Sbjct: 768 LMNSIFRPYLRKFVLVFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 827

Query: 181 VEYLGHLISSKGVEVDPKKIKAITKWPKPTNVCETRGFLGLTGYYRKFVHHYATLAAPLT 240
           VEYLGHLIS+KGVEVDP+KIKAIT WPKPTNV ETRGFLGLTGYYRKFVHHY TLAAPLT
Sbjct: 828 VEYLGHLISNKGVEVDPEKIKAITNWPKPTNVRETRGFLGLTGYYRKFVHHYGTLAAPLT 887

Query: 241 QLLKKGGFKWNAEAEQAFEKLKEAMIALPVLALPMFDKPFEIETDASGYRVGAV 295
           QLLKKGGFKWNAEAEQAFEKLKEAMIALP+LALPMFDKPFEIETDASGY +GAV
Sbjct: 888 QLLKKGGFKWNAEAEQAFEKLKEAMIALPILALPMFDKPFEIETDASGYGIGAV 941

BLAST of Cmc12g0321681 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 3.8e-69
Identity = 138/301 (45.85%), Postives = 186/301 (61.79%), Query Frame = 0

Query: 1   MEKLVNEMLVSVIIRPSASPYSSLVLLVKKKD-----GSWRFYVDYRALNNVTIPDKFPI 60
           +E  V EML   +IR S SPY+S   +V KK        +R  +DYR LN +TIPD++PI
Sbjct: 222 VENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPI 281

Query: 61  PVVEELFDELGGASLFSKIDLKAGYHQIRMVDRDIEKTTFRTHKGHYEFLVMPFELTNAP 120
           P ++E+  +LG    F+ IDL  G+HQI M +  I KT F T  GHYE+L MPF L NAP
Sbjct: 282 PNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAP 341

Query: 121 ATFQSLMNSIFRPYLRKFVLIFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCS 180
           ATFQ  MN+I RP L K  L++ DDI+I+S +  +HL  +++VF  L    L     KC 
Sbjct: 342 ATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCE 401

Query: 181 FGLAKVEYLGHLISSKGVEVDPKKIKAITKWPKPTNVCETRGFLGLTGYYRKFVHHYATL 240
           F   +  +LGH+++  G++ +P K+KAI  +P PT   E R FLGLTGYYRKF+ +YA +
Sbjct: 402 FLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADI 461

Query: 241 AAPLTQLLKKGGFKWNAEAE--QAFEKLKEAMIALPVLALPMFDKPFEIETDASGYRVGA 295
           A P+T  LKK       + E  +AFEKLK  +I  P+L LP F+K F + TDAS   +GA
Sbjct: 462 AKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGA 521

BLAST of Cmc12g0321681 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.8e-66
Identity = 133/301 (44.19%), Postives = 190/301 (63.12%), Query Frame = 0

Query: 1   MEKLVNEMLVSVIIRPSASPYSSLVLLV-KKKDGS----WRFYVDYRALNNVTIPDKFPI 60
           +E  + +ML   IIR S SPY+S + +V KK+D S    +R  +DYR LN +T+ D+ PI
Sbjct: 223 VESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPI 282

Query: 61  PVVEELFDELGGASLFSKIDLKAGYHQIRMVDRDIEKTTFRTHKGHYEFLVMPFELTNAP 120
           P ++E+  +LG  + F+ IDL  G+HQI M    + KT F T  GHYE+L MPF L NAP
Sbjct: 283 PNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAP 342

Query: 121 ATFQSLMNSIFRPYLRKFVLIFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCS 180
           ATFQ  MN I RP L K  L++ DDI+++S + ++HL+ + +VF  L K  L     KC 
Sbjct: 343 ATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCE 402

Query: 181 FGLAKVEYLGHLISSKGVEVDPKKIKAITKWPKPTNVCETRGFLGLTGYYRKFVHHYATL 240
           F   +  +LGH+++  G++ +P+KI+AI K+P PT   E + FLGLTGYYRKF+ ++A +
Sbjct: 403 FLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADI 462

Query: 241 AAPLTQLLKKGG--FKWNAEAEQAFEKLKEAMIALPVLALPMFDKPFEIETDASGYRVGA 295
           A P+T+ LKK       N E + AF+KLK  +   P+L +P F K F + TDAS   +GA
Sbjct: 463 AKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGA 522

BLAST of Cmc12g0321681 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 8.8e-66
Identity = 127/311 (40.84%), Postives = 191/311 (61.41%), Query Frame = 0

Query: 1   MEKLVNEMLVSVIIRPSASPYSSLVLLVKKK-----DGSWRFYVDYRALNNVTIPDKFPI 60
           +E+ ++E+L   IIRPS SPY+S + +V KK     +  +R  VD++ LN VTIPD +PI
Sbjct: 139 VERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPI 198

Query: 61  PVVEELFDELGGASLFSKIDLKAGYHQIRMVDRDIEKTTFRTHKGHYEFLVMPFELTNAP 120
           P +      LG A  F+ +DL +G+HQI M + DI KT F T  G YEFL +PF L NAP
Sbjct: 199 PDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAP 258

Query: 121 ATFQSLMNSIFRPYLRKFVLIFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCS 180
           A FQ +++ I R ++ K   ++ DDI+++S +++ H K++ +V   L K  L  N +K  
Sbjct: 259 AIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSH 318

Query: 181 FGLAKVEYLGHLISSKGVEVDPKKIKAITKWPKPTNVCETRGFLGLTGYYRKFVHHYATL 240
           F   +VE+LG+++++ G++ DPKK++AI++ P PT+V E + FLG+T YYRKF+  YA +
Sbjct: 319 FLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKV 378

Query: 241 AAPLTQLLK------------KGGFKWNAEAEQAFEKLKEAMIALPVLALPMFDKPFEIE 295
           A PLT L +            K     +  A Q+F  LK  + +  +LA P F KPF + 
Sbjct: 379 AKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLT 438

BLAST of Cmc12g0321681 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.5e-57
Identity = 117/309 (37.86%), Postives = 180/309 (58.25%), Query Frame = 0

Query: 5   VNEMLVSVIIRPSASPYSSLVLLVKKK------DGSWRFYVDYRALNNVTIPDKFPIPVV 64
           V ++L   IIRPS SPY+S   +V KK      + + R  +D+R LN  TIPD++P+P +
Sbjct: 201 VKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSI 260

Query: 65  EELFDELGGASLFSKIDLKAGYHQIRMVDRDIEKTTFRTHKGHYEFLVMPFELTNAPATF 124
             +   LG A  F+ +DLK+GYHQI + + D EKT+F  + G YEF  +PF L NA + F
Sbjct: 261 PMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIF 320

Query: 125 QSLMNSIFRPYLRKFVLIFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGL 184
           Q  ++ + R  + K   ++ DD++I+S N  DH++H++ V   L    +  +++K  F  
Sbjct: 321 QRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFK 380

Query: 185 AKVEYLGHLISSKGVEVDPKKIKAITKWPKPTNVCETRGFLGLTGYYRKFVHHYATLAAP 244
             VEYLG ++S  G + DP+K+KAI ++P+P  V + R FLGL  YYR F+  +A +A P
Sbjct: 381 ESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARP 440

Query: 245 LTQLL------------KKGGFKWNAEAEQAFEKLKEAMIALPV-LALPMFDKPFEIETD 295
           +T +L            KK   ++N     AF++L+  + +  V L  P F KPF++ TD
Sbjct: 441 ITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTD 500

BLAST of Cmc12g0321681 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 222.6 bits (566), Expect = 5.7e-57
Identity = 121/295 (41.02%), Postives = 177/295 (60.00%), Query Frame = 0

Query: 1   MEKLVNEMLVSVIIRPSASPYSSLVLLVKKKDGSWRFYVDYRALNNVTIPDKFPIPVVEE 60
           + K+V ++L +  I PS SP SS V+LV KKDG++R  VDYR LN  TI D FP+P ++ 
Sbjct: 612 INKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDN 671

Query: 61  LFDELGGASLFSKIDLKAGYHQIRMVDRDIEKTTFRTHKGHYEFLVMPFELTNAPATFQS 120
           L   +G A +F+ +DL +GYHQI M  +D  KT F T  G YE+ VMPF L NAP+TF  
Sbjct: 672 LLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR 731

Query: 121 LMNSIFRPYLRKFVLIFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 180
            M   FR    +FV ++ DDILI+S + E+H KH++ V   L+   L   +KKC F   +
Sbjct: 732 YMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEE 791

Query: 181 VEYLGHLISSKGVEVDPKKIKAITKWPKPTNVCETRGFLGLTGYYRKFVHHYATLAAPLT 240
            E+LG+ I  + +     K  AI  +P P  V + + FLG+  YYR+F+ + + +A P+ 
Sbjct: 792 TEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI- 851

Query: 241 QLLKKGGFKWNAEAEQAFEKLKEAMIALPVLALPMFDKP-FEIETDASGYRVGAV 295
           QL      +W  + ++A +KLK+A+   PVL +P  +K  + + TDAS   +GAV
Sbjct: 852 QLFICDKSQWTEKQDKAIDKLKDALCNSPVL-VPFNNKANYRLTTDASKDGIGAV 902

BLAST of Cmc12g0321681 vs. ExPASy TrEMBL
Match: A0A5A7SMQ7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00120 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.7e-157
Identity = 276/294 (93.88%), Postives = 284/294 (96.60%), Query Frame = 0

Query: 1   MEKLVNEMLVSVIIRPSASPYSSLVLLVKKKDGSWRFYVDYRALNNVTIPDKFPIPVVEE 60
           MEKLVNEMLVS IIRPSASPYSS VLLVKKKDGSWRF VDYRALNNVT+PDKFPIPVVEE
Sbjct: 648 MEKLVNEMLVSGIIRPSASPYSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 707

Query: 61  LFDELGGASLFSKIDLKAGYHQIRMVDRDIEKTTFRTHKGHYEFLVMPFELTNAPATFQS 120
           LFDELGGASLF+KIDLKAGYHQIRMVD DIEKT FRTH+GHYEFLVMPF LTNAPATFQS
Sbjct: 708 LFDELGGASLFTKIDLKAGYHQIRMVDGDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQS 767

Query: 121 LMNSIFRPYLRKFVLIFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 180
           LMNSIFRPYLRKFVL+FFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK
Sbjct: 768 LMNSIFRPYLRKFVLVFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 827

Query: 181 VEYLGHLISSKGVEVDPKKIKAITKWPKPTNVCETRGFLGLTGYYRKFVHHYATLAAPLT 240
           VEYLGHLIS+KGVEVDP+KIKAIT WPKPTNV ETRGFLGLTGYYRKFVHHY TLAAPLT
Sbjct: 828 VEYLGHLISNKGVEVDPEKIKAITNWPKPTNVRETRGFLGLTGYYRKFVHHYGTLAAPLT 887

Query: 241 QLLKKGGFKWNAEAEQAFEKLKEAMIALPVLALPMFDKPFEIETDASGYRVGAV 295
           QLLKKGGFKWNAEAEQAFEKLKEAMIALP+LALPMFDKPFEIETDASGY +GAV
Sbjct: 888 QLLKKGGFKWNAEAEQAFEKLKEAMIALPILALPMFDKPFEIETDASGYGIGAV 941

BLAST of Cmc12g0321681 vs. ExPASy TrEMBL
Match: A0A5D3DYS4 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G00230 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.7e-157
Identity = 276/294 (93.88%), Postives = 284/294 (96.60%), Query Frame = 0

Query: 1   MEKLVNEMLVSVIIRPSASPYSSLVLLVKKKDGSWRFYVDYRALNNVTIPDKFPIPVVEE 60
           MEKLVNEMLVS IIRPSASPYSS VLLVKKKDGSWRF VDYRALNNVT+PDKFPIPVVEE
Sbjct: 648 MEKLVNEMLVSGIIRPSASPYSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 707

Query: 61  LFDELGGASLFSKIDLKAGYHQIRMVDRDIEKTTFRTHKGHYEFLVMPFELTNAPATFQS 120
           LFDELGGASLF+KIDLKAGYHQIRMVD DIEKT FRTH+GHYEFLVMPF LTNAPATFQS
Sbjct: 708 LFDELGGASLFTKIDLKAGYHQIRMVDGDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQS 767

Query: 121 LMNSIFRPYLRKFVLIFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 180
           LMNSIFRPYLRKFVL+FFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK
Sbjct: 768 LMNSIFRPYLRKFVLVFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 827

Query: 181 VEYLGHLISSKGVEVDPKKIKAITKWPKPTNVCETRGFLGLTGYYRKFVHHYATLAAPLT 240
           VEYLGHLIS+KGVEVDP+KIKAIT WPKPTNV ETRGFLGLTGYYRKFVHHY TLAAPLT
Sbjct: 828 VEYLGHLISNKGVEVDPEKIKAITNWPKPTNVRETRGFLGLTGYYRKFVHHYGTLAAPLT 887

Query: 241 QLLKKGGFKWNAEAEQAFEKLKEAMIALPVLALPMFDKPFEIETDASGYRVGAV 295
           QLLKKGGFKWNAEAEQAFEKLKEAMIALP+LALPMFDKPFEIETDASGY +GAV
Sbjct: 888 QLLKKGGFKWNAEAEQAFEKLKEAMIALPILALPMFDKPFEIETDASGYGIGAV 941

BLAST of Cmc12g0321681 vs. ExPASy TrEMBL
Match: A0A5D3B8Y6 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00260 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.7e-157
Identity = 276/294 (93.88%), Postives = 284/294 (96.60%), Query Frame = 0

Query: 1   MEKLVNEMLVSVIIRPSASPYSSLVLLVKKKDGSWRFYVDYRALNNVTIPDKFPIPVVEE 60
           MEKLVNEMLVS IIRPSASPYSS VLLVKKKDGSWRF VDYRALNNVT+PDKFPIPVVEE
Sbjct: 639 MEKLVNEMLVSGIIRPSASPYSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 698

Query: 61  LFDELGGASLFSKIDLKAGYHQIRMVDRDIEKTTFRTHKGHYEFLVMPFELTNAPATFQS 120
           LFDELGGASLF+KIDLKAGYHQIRMVD DIEKT FRTH+GHYEFLVMPF LTNAPATFQS
Sbjct: 699 LFDELGGASLFTKIDLKAGYHQIRMVDGDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQS 758

Query: 121 LMNSIFRPYLRKFVLIFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 180
           LMNSIFRPYLRKFVL+FFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK
Sbjct: 759 LMNSIFRPYLRKFVLVFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 818

Query: 181 VEYLGHLISSKGVEVDPKKIKAITKWPKPTNVCETRGFLGLTGYYRKFVHHYATLAAPLT 240
           VEYLGHLIS+KGVEVDP+KIKAIT WPKPTNV ETRGFLGLTGYYRKFVHHY TLAAPLT
Sbjct: 819 VEYLGHLISNKGVEVDPEKIKAITNWPKPTNVRETRGFLGLTGYYRKFVHHYGTLAAPLT 878

Query: 241 QLLKKGGFKWNAEAEQAFEKLKEAMIALPVLALPMFDKPFEIETDASGYRVGAV 295
           QLLKKGGFKWNAEAEQAFEKLKEAMIALP+LALPMFDKPFEIETDASGY +GAV
Sbjct: 879 QLLKKGGFKWNAEAEQAFEKLKEAMIALPILALPMFDKPFEIETDASGYGIGAV 932

BLAST of Cmc12g0321681 vs. ExPASy TrEMBL
Match: A0A5A7TXP9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001500 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.7e-157
Identity = 276/294 (93.88%), Postives = 284/294 (96.60%), Query Frame = 0

Query: 1   MEKLVNEMLVSVIIRPSASPYSSLVLLVKKKDGSWRFYVDYRALNNVTIPDKFPIPVVEE 60
           MEKLVNEMLVS IIRPSASPYSS VLLVKKKDGSWRF VDYRALNNVT+PDKFPIPVVEE
Sbjct: 648 MEKLVNEMLVSGIIRPSASPYSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 707

Query: 61  LFDELGGASLFSKIDLKAGYHQIRMVDRDIEKTTFRTHKGHYEFLVMPFELTNAPATFQS 120
           LFDELGGASLF+KIDLKAGYHQIRMVD DIEKT FRTH+GHYEFLVMPF LTNAPATFQS
Sbjct: 708 LFDELGGASLFTKIDLKAGYHQIRMVDGDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQS 767

Query: 121 LMNSIFRPYLRKFVLIFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 180
           LMNSIFRPYLRKFVL+FFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK
Sbjct: 768 LMNSIFRPYLRKFVLVFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 827

Query: 181 VEYLGHLISSKGVEVDPKKIKAITKWPKPTNVCETRGFLGLTGYYRKFVHHYATLAAPLT 240
           VEYLGHLIS+KGVEVDP+KIKAIT WPKPTNV ETRGFLGLTGYYRKFVHHY TLAAPLT
Sbjct: 828 VEYLGHLISNKGVEVDPEKIKAITNWPKPTNVRETRGFLGLTGYYRKFVHHYGTLAAPLT 887

Query: 241 QLLKKGGFKWNAEAEQAFEKLKEAMIALPVLALPMFDKPFEIETDASGYRVGAV 295
           QLLKKGGFKWNAEAEQAFEKLKEAMIALP+LALPMFDKPFEIETDASGY +GAV
Sbjct: 888 QLLKKGGFKWNAEAEQAFEKLKEAMIALPILALPMFDKPFEIETDASGYGIGAV 941

BLAST of Cmc12g0321681 vs. ExPASy TrEMBL
Match: A0A5D3E1V9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00560 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.7e-157
Identity = 276/294 (93.88%), Postives = 284/294 (96.60%), Query Frame = 0

Query: 1   MEKLVNEMLVSVIIRPSASPYSSLVLLVKKKDGSWRFYVDYRALNNVTIPDKFPIPVVEE 60
           MEKLVNEMLVS IIRPSASPYSS VLLVKKKDGSWRF VDYRALNNVT+PDKFPIPVVEE
Sbjct: 648 MEKLVNEMLVSGIIRPSASPYSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 707

Query: 61  LFDELGGASLFSKIDLKAGYHQIRMVDRDIEKTTFRTHKGHYEFLVMPFELTNAPATFQS 120
           LFDELGGASLF+KIDLKAGYHQIRMVD DIEKT FRTH+GHYEFLVMPF LTNAPATFQS
Sbjct: 708 LFDELGGASLFTKIDLKAGYHQIRMVDGDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQS 767

Query: 121 LMNSIFRPYLRKFVLIFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 180
           LMNSIFRPYLRKFVL+FFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK
Sbjct: 768 LMNSIFRPYLRKFVLVFFDDILIYSRNWEDHLKHMEIVFLVLRKHELFANRKKCSFGLAK 827

Query: 181 VEYLGHLISSKGVEVDPKKIKAITKWPKPTNVCETRGFLGLTGYYRKFVHHYATLAAPLT 240
           VEYLGHLIS+KGVEVDP+KIKAIT WPKPTNV ETRGFLGLTGYYRKFVHHY TLAAPLT
Sbjct: 828 VEYLGHLISNKGVEVDPEKIKAITNWPKPTNVRETRGFLGLTGYYRKFVHHYGTLAAPLT 887

Query: 241 QLLKKGGFKWNAEAEQAFEKLKEAMIALPVLALPMFDKPFEIETDASGYRVGAV 295
           QLLKKGGFKWNAEAEQAFEKLKEAMIALP+LALPMFDKPFEIETDASGY +GAV
Sbjct: 888 QLLKKGGFKWNAEAEQAFEKLKEAMIALPILALPMFDKPFEIETDASGYGIGAV 941

BLAST of Cmc12g0321681 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 142.9 bits (359), Expect = 4.1e-34
Identity = 66/131 (50.38%), Postives = 88/131 (67.18%), Query Frame = 0

Query: 152 LKHMEIVFLVLRKHELFANRKKCSFGLAKVEYLG--HLISSKGVEVDPKKIKAITKWPKP 211
           + H+ +V  +  +H+ +ANRKKC+FG  ++ YLG  H+IS +GV  DP K++A+  WP+P
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 212 TNVCETRGFLGLTGYYRKFVHHYATLAAPLTQLLKKGGFKWNAEAEQAFEKLKEAMIALP 271
            N  E RGFLGLTGYYR+FV +Y  +  PLT+LLKK   KW   A  AF+ LK A+  LP
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLP 120

Query: 272 VLALPMFDKPF 281
           VLALP    PF
Sbjct: 121 VLALPDLKLPF 131

BLAST of Cmc12g0321681 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.6e-04
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 0

Query: 1  MEKLVNEMLVSVIIRPSASPYSSLVLLVKKKDGSW 36
          ++  + EML + II+PS SPYSS VLLV+KKDG W
Sbjct: 45 LKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0065392.13.6e-15793.88Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0048423.13.6e-15793.88Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
TYK30083.13.6e-15793.88Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0032454.13.6e-15793.88Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ99900.1 Ty3/gyp... [more]
TYK22240.13.6e-15793.88Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
P208253.8e-6945.85Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
P043231.8e-6644.19Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
Q8I7P98.8e-6640.84Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
P104011.5e-5737.86Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas... [more]
Q993155.7e-5741.02Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Match NameE-valueIdentityDescription
A0A5A7SMQ71.7e-15793.88Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3DYS41.7e-15793.88Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3B8Y61.7e-15793.88Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TXP91.7e-15793.88Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3E1V91.7e-15793.88Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
ATMG00860.14.1e-3450.38DNA/RNA polymerases superfamily protein [more]
ATMG00850.12.6e-0460.00DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 53..188
e-value: 6.0E-78
score: 263.0
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 198..286
e-value: 3.0E-29
score: 102.9
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 1..113
e-value: 6.0E-78
score: 263.0
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 13..294
NoneNo IPR availablePANTHERPTHR24559:SF324TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 13..294
NoneNo IPR availableCDDcd01647RT_LTRcoord: 13..188
e-value: 4.7013E-92
score: 268.695
IPR041577Reverse transcriptase/retrotransposon-derived protein, RNase H-like domainPFAMPF17919RT_RNaseH_2coord: 250..294
e-value: 1.4E-12
score: 47.4
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 28..186
e-value: 6.6E-26
score: 91.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 9..188
score: 13.52889
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..294

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0321681.1Cmc12g0321681.1mRNA