Cmc12g0321331 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0321331
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionFatty acyl-CoA reductase
LocationCMiso1.1chr12: 8400641 .. 8402038 (+)
RNA-Seq ExpressionCmc12g0321331
SyntenyCmc12g0321331
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCAAAAGTCTCAGTAATCTCCAACAAAAACATTCATAATTAGACCACATAATTAAAATTAAAACCCATTTAAGACTTATTCCAAGGTTGCCAATAGCTCAGATTCATAGGTTAACTCTCTCCGAACAGCATAATCTCTTCTTTCATCCGTTGCGCTTTATTTCAGTACAAGAGATTTAAATAGAATCAAAAATTGATAAACAACTCCAAGTTGCACATAAACCCTAATCATATCAGTACATTATATACCCAGAGCGGGAAAAGAATTTAAAATTTCGATTTTAATTGCTAAAAATGCGCGACTACATGAACTCATCAAGCCATAGACAAAAGAGGAAGCAATCTTCAGAGTTCCATTGGACAGAGTACAATATAAAATTAAGAAGGAAAATAGAGAAATCGCTTAACAAAAACCGACTTTTCATTCAATTGATTCCAAAATATGCAACAAAAAGGAAGCTAAGTCAACGATTCAGAACAATCAGGCCGCTTTTTACACAAGAAAACCCTAATCTGTGAATCTAAGAGCTAGTAAACTTGGTAACAGCCTTGGTACCCTCAGAGACGGCGTGTTTAGCCAACTCACCAGGAAGAACAAGGCGCACAGCCGTTTGGATCTCCCGAGAGGTTATGGTCGGCTTTTTGTTGTAGCGAGCGAGCTTTGAGGATTCCTGAGCGAGCTTCTCGAAAATGTCGTTGATAAAACTGTTCATAATACCCATGGCTTTGCTGGAGATTCCAATATCGGGATGAACTTGCTTGAGAACTTTGAAGATGTAGATCTTGTAAGTCTCAATGCTCTTCTTGGCTCTCTTCTTTTTCTTATCGGAGGCGTCCTTGGGAAGCTTCTTCTCGGCTCTTGGCTTCTTCTCCGCCGGAGCTTTCTCGGCCTTCTTCTCCTCCGCCGCTGGCTTCTTCTCCGCGGGCTTCTTCTCGGCCTTTGGCGCCATTGGTAAATATAACGAAGGAATTTGGAGTTAAATTGAAGATGGGATTTCTTTGAAGCGAGCGAAAATGAGTACTGAATTAAAATCTGAGGGGATTGTTTATATTTATAGATGGAGACGGCACAAAATGATTGGCTGACTTTATTGAGACACGGATCGGTGACGTGGACGGTGGAGATTTGAGATTTGGTATCTGAGGGCTGTATTTAATTTTATTTCTTTGTTTTGAGGGCCAATTTGAATTTCAAGGTTCGTGTCTCCTTTACCATTTTGGTTTGCTTAAAAAAAAATTCGGTTTTCGCGGCTCATTCTCAAAGCTTAAAAAGTTAAATATTATCAATTTGTTCCTTTAAATTTTTTTAAACTAATATCTATCTTTATGTTAGGTAATAGTATTATACTTAAAAAAAACACTTTTCATCTATGAAATTTGAGTTCAATATCTATCTG

mRNA sequence

GCTCAAAAGTCTCAGTAATCTCCAACAAAAACATTCATAATTAGACCACATAATTAAAATTAAAACCCATTTAAGACTTATTCCAAGGTTGCCAATAGCTCAGATTCATAGGTTAACTCTCTCCGAACAGCATAATCTCTTCTTTCATCCGTTGCGCTTTATTTCAGTACAAGAGATTTAAATAGAATCAAAAATTGATAAACAACTCCAAGTTGCACATAAACCCTAATCATATCAGTACATTATATACCCAGAGCGGGAAAAGAATTTAAAATTTCGATTTTAATTGCTAAAAATGCGCGACTACATGAACTCATCAAGCCATAGACAAAAGAGGAAGCAATCTTCAGAGTTCCATTGGACAGAGTACAATATAAAATTAAGAAGGAAAATAGAGAAATCGCTTAACAAAAACCGACTTTTCATTCAATTGATTCCAAAATATGCAACAAAAAGGAAGCTAAGTCAACGATTCAGAACAATCAGGCCGCTTTTTACACAAGAAAACCCTAATCTGTGAATCTAAGAGCTAGTAAACTTGGTAACAGCCTTGGTACCCTCAGAGACGGCGTGTTTAGCCAACTCACCAGGAAGAACAAGGCGCACAGCCGTTTGGATCTCCCGAGAGGTTATGGTCGGCTTTTTGTTGTAGCGAGCGAGCTTTGAGGATTCCTGAGCGAGCTTCTCGAAAATGTCGTTGATAAAACTGTTCATAATACCCATGGCTTTGCTGGAGATTCCAATATCGGGATGAACTTGCTTGAGAACTTTGAAGATGTAGATCTTGTAAGTCTCAATGCTCTTCTTGGCTCTCTTCTTTTTCTTATCGGAGGCGTCCTTGGGAAGCTTCTTCTCGGCTCTTGGCTTCTTCTCCGCCGGAGCTTTCTCGGCCTTCTTCTCCTCCGCCGCTGGCTTCTTCTCCGCGGGCTTCTTCTCGGCCTTTGGCGCCATTGGTAAATATAACGAAGGAATTTGGAGTTAAATTGAAGATGGGATTTCTTTGAAGCGAGCGAAAATGAGTACTGAATTAAAATCTGAGGGGATTGTTTATATTTATAGATGGAGACGGCACAAAATGATTGGCTGACTTTATTGAGACACGGATCGGTGACGTGGACGGTGGAGATTTGAGATTTGGTATCTGAGGGCTGTATTTAATTTTATTTCTTTGTTTTGAGGGCCAATTTGAATTTCAAGGTTCGTGTCTCCTTTACCATTTTGGTTTGCTTAAAAAAAAATTCGGTTTTCGCGGCTCATTCTCAAAGCTTAAAAAGTTAAATATTATCAATTTGTTCCTTTAAATTTTTTTAAACTAATATCTATCTTTATGTTAGGTAATAGTATTATACTTAAAAAAAACACTTTTCATCTATGAAATTTGAGTTCAATATCTATCTG

Coding sequence (CDS)

ATGAACTTGCTTGAGAACTTTGAAGATGTAGATCTTGTAAGTCTCAATGCTCTTCTTGGCTCTCTTCTTTTTCTTATCGGAGGCGTCCTTGGGAAGCTTCTTCTCGGCTCTTGGCTTCTTCTCCGCCGGAGCTTTCTCGGCCTTCTTCTCCTCCGCCGCTGGCTTCTTCTCCGCGGGCTTCTTCTCGGCCTTTGGCGCCATTGGTAA

Protein sequence

MNLLENFEDVDLVSLNALLGSLLFLIGGVLGKLLLGSWLLLRRSFLGLLLLRRWLLLRGLLLGLWRHW
Homology
[Close]
BLAST of Cmc12g0321331 vs. NCBI nr
Match: KAF4376799.1 (hypothetical protein F8388_025670 [Cannabis sativa] >KAF4390849.1 hypothetical protein G4B88_015739 [Cannabis sativa])

HSP 1 Score: 63.5 bits (153), Expect = 7.9e-07
Identity = 45/69 (65.22%), Postives = 49/69 (71.01%), Query Frame = 0 

Query: 1   MNLLENFEDVDLVSLNALLGSLLFLI--GGVLGKLLLGSWLLLRRSFLGLLLLRRWLLLR 60
           MNL +NFEDVDLVSL+ LL SL  LI  G VL +LLLG+WLLL RS LGLL      LL 
Sbjct: 115 MNLFQNFEDVDLVSLHTLLRSLFLLIGSGSVLWQLLLGTWLLLCRSLLGLL---HRFLLS 174

Query: 61  GLLLGLWRH 68
            L LGLWRH
Sbjct: 175 WLFLGLWRH 180

[Close]
BLAST of Cmc12g0321331 vs. NCBI nr
Match: KAF5955964.1 (hypothetical protein HYC85_008820 [Camellia sinensis])

HSP 1 Score: 62.4 bits (150), Expect = 1.8e-06
Identity = 46/73 (63.01%), Postives = 50/73 (68.49%), Query Frame = 0 

Query: 1   MNLLENFEDVDLVSLNALLGSLLFLIGG----VLGKLLLGSWLLLRRSFL--GLLLLRRW 60
           MNL ++ EDVDLV LNALL  LL L  G    +L +LL G   LLRRSFL  G LLL RW
Sbjct: 334 MNLFQHLEDVDLVGLNALLRPLLLLFSGGCSALLRQLLPGLRFLLRRSFLGDGALLLLRW 393

Query: 61  LLLRGLLLGLWRH 68
           LLL GLLL LWRH
Sbjct: 394 LLLGGLLLSLWRH 406

[Close]
BLAST of Cmc12g0321331 vs. NCBI nr
Match: RID68936.1 (hypothetical protein BRARA_C01062 [Brassica rapa])

HSP 1 Score: 53.9 bits (128), Expect = 6.2e-04
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 1   MNLLENFEDVDLVSLNALLGSLLFLI----GGVLGKLLLGSWLLLRRSFLGLLLLRRWLL 57
           ++LL++ EDVDLV L+ALLG LL L+    GG+L +LL G WLLLRR FLG LLLR  LL
Sbjct: 160 VDLLQHLEDVDLVCLDALLGPLLLLVSGDGGGILRELLPGLWLLLRRCFLGRLLLRGLLL 219

[Close]
BLAST of Cmc12g0321331 vs. ExPASy TrEMBL
Match: A0A7J6H8Q7 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_025670 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.8e-07
Identity = 45/69 (65.22%), Postives = 49/69 (71.01%), Query Frame = 0 

Query: 1   MNLLENFEDVDLVSLNALLGSLLFLI--GGVLGKLLLGSWLLLRRSFLGLLLLRRWLLLR 60
           MNL +NFEDVDLVSL+ LL SL  LI  G VL +LLLG+WLLL RS LGLL      LL 
Sbjct: 115 MNLFQNFEDVDLVSLHTLLRSLFLLIGSGSVLWQLLLGTWLLLCRSLLGLL---HRFLLS 174

Query: 61  GLLLGLWRH 68
            L LGLWRH
Sbjct: 175 WLFLGLWRH 180

[Close]
BLAST of Cmc12g0321331 vs. ExPASy TrEMBL
Match: A0A803RBR7 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.5e-07
Identity = 45/69 (65.22%), Postives = 51/69 (73.91%), Query Frame = 0 

Query: 1  MNLLENFEDVDLVSLNALLGSLLFLI--GGVLGKLLLGSWLLLRRSFLGLLLLRRWLLLR 60
          MNL +NF+DVDLVSL+ALL SLL L+  G VL +LLLG+WLLL RS LGLL      LL 
Sbjct: 1  MNLFQNFKDVDLVSLHALLRSLLLLVGSGSVLWQLLLGTWLLLCRSLLGLL---HRFLLS 60

Query: 61 GLLLGLWRH 68
           LLL LWRH
Sbjct: 61 WLLLCLWRH 66

[Close]
BLAST of Cmc12g0321331 vs. ExPASy TrEMBL
Match: A0A7J7HV61 (Fatty acyl-CoA reductase OS=Camellia sinensis OX=4442 GN=HYC85_008820 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.5e-07
Identity = 46/73 (63.01%), Postives = 50/73 (68.49%), Query Frame = 0 

Query: 1   MNLLENFEDVDLVSLNALLGSLLFLIGG----VLGKLLLGSWLLLRRSFL--GLLLLRRW 60
           MNL ++ EDVDLV LNALL  LL L  G    +L +LL G   LLRRSFL  G LLL RW
Sbjct: 334 MNLFQHLEDVDLVGLNALLRPLLLLFSGGCSALLRQLLPGLRFLLRRSFLGDGALLLLRW 393

Query: 61  LLLRGLLLGLWRH 68
           LLL GLLL LWRH
Sbjct: 394 LLLGGLLLSLWRH 406

[Close]
BLAST of Cmc12g0321331 vs. ExPASy TrEMBL
Match: A0A803RBR8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.2e-06
Identity = 46/69 (66.67%), Postives = 51/69 (73.91%), Query Frame = 0 

Query: 1  MNLLENFEDVDLVSLNALLGSLLFLI--GGVLGKLLLGSWLLLRRSFLGLLLLRRWLLLR 60
          MNL +NFEDVDLVSL+ALL SLL L+  G VL +LLLG+WLLL RS LGLL   R  LL 
Sbjct: 1  MNLFQNFEDVDLVSLDALLCSLLLLVGSGSVLWQLLLGTWLLLCRSLLGLL---RRFLLS 60

Query: 61 GLLLGLWRH 68
           LLL L RH
Sbjct: 61 WLLLCLRRH 66

[Close]
BLAST of Cmc12g0321331 vs. ExPASy TrEMBL
Match: A0A398A1B4 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRARA_C01062 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.0e-04
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 1   MNLLENFEDVDLVSLNALLGSLLFLI----GGVLGKLLLGSWLLLRRSFLGLLLLRRWLL 57
           ++LL++ EDVDLV L+ALLG LL L+    GG+L +LL G WLLLRR FLG LLLR  LL
Sbjct: 160 VDLLQHLEDVDLVCLDALLGPLLLLVSGDGGGILRELLPGLWLLLRRCFLGRLLLRGLLL 219

The following BLAST results are available for this feature:
BLAST of Cmc12g0321331 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF4376799.17.9e-0765.22hypothetical protein F8388_025670 [Cannabis sativa] >KAF4390849.1 hypothetical p... [more]
KAF5955964.11.8e-0663.01hypothetical protein HYC85_008820 [Camellia sinensis][more]
RID68936.16.2e-0461.67hypothetical protein BRARA_C01062 [Brassica rapa][more]
BLAST of Cmc12g0321331 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc12g0321331 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7J6H8Q73.8e-0765.22Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_025670 PE=4 SV=1[more]
A0A803RBR76.5e-0765.22Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A7J7HV618.5e-0763.01Fatty acyl-CoA reductase OS=Camellia sinensis OX=4442 GN=HYC85_008820 PE=3 SV=1[more]
A0A803RBR83.2e-0666.67Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A398A1B43.0e-0461.67Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRARA_C01062 PE=4 SV=1[more]
BLAST of Cmc12g0321331 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0321331.1Cmc12g0321331.1mRNA