Cmc12g0320361 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0320361
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr12: 6661974 .. 6663101 (+)
RNA-Seq Expression	Cmc12g0320361
Synteny	Cmc12g0320361

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTACAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGTCACGTGGTTTCTAAGGCTGGAGTCTATGTGGATCCAGCTAAGATAGAGGCAGTTACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTGGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAAGGTTTGGGTTGCGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTCGCTTTGAAGATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGA

mRNA sequence

ATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTACAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGTCACGTGGTTTCTAAGGCTGGAGTCTATGTGGATCCAGCTAAGATAGAGGCAGTTACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTGGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAAGGTTTGGGTTGCGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTCGCTTTGAAGATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGA

Coding sequence (CDS)

ATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTACAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGTCACGTGGTTTCTAAGGCTGGAGTCTATGTGGATCCAGCTAAGATAGAGGCAGTTACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTGGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAAGGTTTGGGTTGCGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTCGCTTTGAAGATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGA

Protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRYRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRR

Homology

[Close]

BLAST of Cmc12g0320361 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 753.4 bits (1944), Expect = 9.1e-214
Identity = 373/375 (99.47%), Postives = 373/375 (99.47%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 580 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRYRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFR RYGHYEFIVMSFGLT
Sbjct: 640 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 700 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181 KCEFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGV VDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 760 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 820 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 880 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361 KYFFTQKELNMRQRR 376
           KYFFTQKELNMRQRR
Sbjct: 940 KYFFTQKELNMRQRR 954

[Close]

BLAST of Cmc12g0320361 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 751.1 bits (1938), Expect = 4.5e-213
Identity = 372/375 (99.20%), Postives = 372/375 (99.20%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRYRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFR RYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGV VDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYFFTQKELNMRQRR 376
            KYFFTQKELNMRQRR
Sbjct: 1194 KYFFTQKELNMRQRR 1208

[Close]

BLAST of Cmc12g0320361 vs. NCBI nr
Match: KAA0037244.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 749.6 bits (1934), Expect = 1.3e-212
Identity = 371/375 (98.93%), Postives = 371/375 (98.93%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 614 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 673

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRYRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFR RYGHYEFIVMSFGLT
Sbjct: 674 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 733

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLRMVLQTLRDNKLYAKF 
Sbjct: 734 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFL 793

Query: 181 KCEFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGV VDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 794 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 853

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 854 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 913

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 914 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 973

Query: 361 KYFFTQKELNMRQRR 376
           KYFFTQKELNMRQRR
Sbjct: 974 KYFFTQKELNMRQRR 988

[Close]

BLAST of Cmc12g0320361 vs. NCBI nr
Match: AAO45752.1 (pol protein [Cucumis melo subsp. melo])

HSP 1 Score: 748.8 bits (1932), Expect = 2.2e-212
Identity = 370/375 (98.67%), Postives = 372/375 (99.20%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRYRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFR RYGHY+FIVMSFGLT
Sbjct: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYQFIVMSFGLT 120

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180

Query: 181 KCEFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGV VDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGL
Sbjct: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360

Query: 361 KYFFTQKELNMRQRR 376
           KYFFTQKELNMRQRR
Sbjct: 361 KYFFTQKELNMRQRR 375

[Close]

BLAST of Cmc12g0320361 vs. NCBI nr
Match: KAA0040689.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 748.4 bits (1931), Expect = 2.9e-212
Identity = 370/375 (98.67%), Postives = 371/375 (98.93%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 738  MAPAELKELKVQLQELLDKGFIRPSMSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 797

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRYRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFR RYGHYEFIVMSFGLT
Sbjct: 798  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 857

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 858  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 917

Query: 181  KCEFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGV VDP KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 918  KCEFWLKQVSFLGHVVSKAGVSVDPVKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 977

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL VPDGSGSFVIYSDASKKGL
Sbjct: 978  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLIVPDGSGSFVIYSDASKKGL 1037

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 1038 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1097

Query: 361  KYFFTQKELNMRQRR 376
            KYFFTQKELNMRQRR
Sbjct: 1098 KYFFTQKELNMRQRR 1112

[Close]

BLAST of Cmc12g0320361 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 4.7e-80
Identity = 151/375 (40.27%), Postives = 234/375 (62.40%), Query Frame = 0


Query: 7   KELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRY 66
           +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN++TV +R+
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 67  PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRYRYGHYEFIVMSFGLTN 126
           P+P +D++  +L     F+ IDL  G+HQ+ +  E V KTAF  ++GHYE++ M FGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 127 APAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSK 186
           APA F   MN + R  L+   +V++DDI+++S +  EH + L +V + L    L  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 187 CEFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 246
           CEF  ++ +FLGHV++  G+  +P KIEA+  +  P+   E+++FLGL GYYR+F+ NF+
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 247 RIATPLTQLTRKGAPFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 306
            IA P+T+  +K      +    DS F+ LK  +   P+L VPD +  F + +DAS   L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

Query: 307 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 366
           G VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +I +DH+ L
Sbjct: 521 GAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPL 580

Query: 367 KYFFTQKELNMRQRR 376
            + +  K+ N +  R
Sbjct: 581 SWLYRMKDPNSKLTR 595

[Close]

BLAST of Cmc12g0320361 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.4e-79
Identity = 146/374 (39.04%), Postives = 227/374 (60.70%), Query Frame = 0


Query: 8   ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYP 67
           E++ Q+QE+L++G IR S SP+ +P   V KK         R+ IDYR+LN++T+ +RYP
Sbjct: 221 EVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYP 280

Query: 68  LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRYRYGHYEFIVMSFGLTNA 127
           +P +D++  +L     F+ IDL  G+HQ+ + +E + KTAF  + GHYE++ M FGL NA
Sbjct: 281 IPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA 340

Query: 128 PAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKC 187
           PA F   MN + R  L+   +V++DDI+I+S +  EH   +++V   L D  L  +  KC
Sbjct: 341 PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKC 400

Query: 188 EFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR 247
           EF  K+ +FLGH+V+  G+  +P K++A+  +  P+   E+R+FLGL GYYR+F+ N++ 
Sbjct: 401 EFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYAD 460

Query: 248 IATPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG 307
           IA P+T   +K       K    ++F+ LK  ++  P+L +PD    FV+ +DAS   LG
Sbjct: 461 IAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALG 520

Query: 308 CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLK 367
            VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL G +  I +DH+ L+
Sbjct: 521 AVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLR 580

Query: 368 YFFTQKELNMRQRR 376
           +    KE   +  R
Sbjct: 581 WLHNLKEPGAKLER 594

[Close]

BLAST of Cmc12g0320361 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 8.9e-71
Identity = 136/367 (37.06%), Postives = 218/367 (59.40%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRYRYGHYEFIVMSFGLT 120
           YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEF   QV F+G+ +S+ G       I+ V  W +P    E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

[Close]

BLAST of Cmc12g0320361 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 8.9e-71
Identity = 136/367 (37.06%), Postives = 218/367 (59.40%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRYRYGHYEFIVMSFGLT 120
           YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEF   QV F+G+ +S+ G       I+ V  W +P    E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

[Close]

BLAST of Cmc12g0320361 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 8.9e-71
Identity = 136/367 (37.06%), Postives = 218/367 (59.40%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRYRYGHYEFIVMSFGLT 120
           YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEF   QV F+G+ +S+ G       I+ V  W +P    E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

[Close]

BLAST of Cmc12g0320361 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 753.4 bits (1944), Expect = 4.4e-214
Identity = 373/375 (99.47%), Postives = 373/375 (99.47%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 580 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRYRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFR RYGHYEFIVMSFGLT
Sbjct: 640 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 700 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181 KCEFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGV VDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 760 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 820 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 880 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361 KYFFTQKELNMRQRR 376
           KYFFTQKELNMRQRR
Sbjct: 940 KYFFTQKELNMRQRR 954

[Close]

BLAST of Cmc12g0320361 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 2.2e-213
Identity = 372/375 (99.20%), Postives = 372/375 (99.20%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRYRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFR RYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGV VDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYFFTQKELNMRQRR 376
            KYFFTQKELNMRQRR
Sbjct: 1194 KYFFTQKELNMRQRR 1208

[Close]

BLAST of Cmc12g0320361 vs. ExPASy TrEMBL
Match: A0A5A7T190 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001700 PE=4 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 6.4e-213
Identity = 371/375 (98.93%), Postives = 371/375 (98.93%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 614 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 673

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRYRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFR RYGHYEFIVMSFGLT
Sbjct: 674 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 733

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLRMVLQTLRDNKLYAKF 
Sbjct: 734 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFL 793

Query: 181 KCEFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGV VDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 794 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 853

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 854 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 913

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 914 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 973

Query: 361 KYFFTQKELNMRQRR 376
           KYFFTQKELNMRQRR
Sbjct: 974 KYFFTQKELNMRQRR 988

[Close]

BLAST of Cmc12g0320361 vs. ExPASy TrEMBL
Match: Q84KB0 (Pol protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 748.8 bits (1932), Expect = 1.1e-212
Identity = 370/375 (98.67%), Postives = 372/375 (99.20%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRYRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFR RYGHY+FIVMSFGLT
Sbjct: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYQFIVMSFGLT 120

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180

Query: 181 KCEFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGV VDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGL
Sbjct: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360

Query: 361 KYFFTQKELNMRQRR 376
           KYFFTQKELNMRQRR
Sbjct: 361 KYFFTQKELNMRQRR 375

[Close]

BLAST of Cmc12g0320361 vs. ExPASy TrEMBL
Match: A0A5A7THE6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00030 PE=4 SV=1)

HSP 1 Score: 748.4 bits (1931), Expect = 1.4e-212
Identity = 370/375 (98.67%), Postives = 371/375 (98.93%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 738  MAPAELKELKVQLQELLDKGFIRPSMSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 797

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRYRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFR RYGHYEFIVMSFGLT
Sbjct: 798  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 857

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 858  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 917

Query: 181  KCEFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGV VDP KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 918  KCEFWLKQVSFLGHVVSKAGVSVDPVKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 977

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL VPDGSGSFVIYSDASKKGL
Sbjct: 978  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLIVPDGSGSFVIYSDASKKGL 1037

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 1038 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1097

Query: 361  KYFFTQKELNMRQRR 376
            KYFFTQKELNMRQRR
Sbjct: 1098 KYFFTQKELNMRQRR 1112

[Close]

BLAST of Cmc12g0320361 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 120.6 bits (301), Expect = 2.8e-27
Identity = 59/131 (45.04%), Postives = 82/131 (62.60%), Query Frame = 0


Query: 162 HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVYVDPAKIEAVTGWTRPST 221
           HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GV  DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV 281
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 282 LTVPDGSGSFV 291
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc12g0320361 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048687.1	9.1e-214	99.47	pol protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	4.5e-213	99.20	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037244.1	1.3e-212	98.93	reverse transcriptase [Cucumis melo var. makuwa]	[more]
AAO45752.1	2.2e-212	98.67	pol protein [Cucumis melo subsp. melo]	[more]
KAA0040689.1	2.9e-212	98.67	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc12g0320361 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	4.7e-80	40.27	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	1.4e-79	39.04	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P0CT41	8.9e-71	37.06	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	8.9e-71	37.06	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	8.9e-71	37.06	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc12g0320361 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U330	4.4e-214	99.47	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5D3BPI1	2.2e-213	99.20	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7T190	6.4e-213	98.93	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37...	[more]
Q84KB0	1.1e-212	98.67	Pol protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5A7THE6	1.4e-212	98.67	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold52...	[more]

BLAST of Cmc12g0320361 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.8e-27	45.04	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 1.3E-88 score: 297.8
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..367
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 2..367
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 290..375 e-value: 3.50224E-42 score: 141.861
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 2.81273E-99 score: 290.266
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 259..353 e-value: 1.6E-32 score: 111.4
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 4.4E-30 score: 104.9
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..196 score: 11.233002
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 1.3E-88 score: 297.8
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 206..296 e-value: 3.0E-31 score: 109.3
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..375

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0320361.1	Cmc12g0320361.1	mRNA