Cmc12g0319591 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0319591
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
LocationCMiso1.1chr12: 5221623 .. 5223035 (-)
RNA-Seq ExpressionCmc12g0319591
SyntenyCmc12g0319591
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTTTGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAATAAGGTGACAGTCAAGAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTATCTTTTCTAAGATCGACCTGCGAACAGGCTATCACCAGTTGAGGATCAGGGACAGTGAAATCCCTAAGACGGCCTTCCGTTCTAGATACGGACATTACGAGTTCATTGTGATGTCTTTTGGGTTGACTAATGCTCCTGCAGTATTCATGGACTTGATGAACAGGGTGTTTAAGAACTTCCTAGACTCGTTCGTCATAGTTTTCATTGACGACATTTTGATCTACTCCAAAATGGAGGCTGAGCATGAGGAGCAATTGCACCAAGTTTTGGAGACTCTTCGAGCCAATAGGCTGTATGCCAAGTTCTCCAAGAGCAAGTTTTGGCTGAAGAAGGTATCTTTCCTTGGACATGTGGTGTCCAGTGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGCGGTTACCAATTGGCCTCGACCGTCTACAGTTTGCGAGATTCGTAGTTTCCTGGGCTTGGCAGGTTACTATAGGAGGTTCATGGAAGACTTCTCACGTATAGCCAGCCCCTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTATTTGGAGCCCAGCTTGCGAGAGCATCTTCCAGGAGCTTAAGCAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGGTCGGGAAGTTTTGTGATCTACAGTGATGCCTCCAAAAAGGGACTGGGATGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCTGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCACGACTTAGAGTTGGCAGCAGTGGTTTTTGCACTGAAGATATGGAGGCACTATCTGTACGGCGAGAAGATACAGATTTTCACTGACCATAAGAGCCTGAAGTATTTCTTCACCCAGAAGGAGCTGAACATGAGGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACTGCGAGATTCTGTACCACCCAGGTAAGGCAAATGTAGTAGCTGACGCACTGAGTAAGAAGGTTGCACATTCAGCAGCACTGATCACCAAGCAAGCCCCCTTACTTAGAGATTTTGAGAGAGCCGAGATTGCAGTTTCAGTAGGAGAGGTTACCTCACAGTTGGCTCAGTTGTCAGTACAGCCGACCTTGAGGCAGAGGATTATCGTTGCTCAGCTAAATGATCCTTATTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGCAAGGTGAGGATTTCTCCATATTCTCTAACGATGGCCTTACGTTTGAGGGACGCTTGTGTGTGCCGGAAGACAGTGCAGTCAAGACAGAGCTTTTGA

mRNA sequence

ATGTTGTTTGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAATAAGGTGACAGTCAAGAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTATCTTTTCTAAGATCGACCTGCGAACAGGCTATCACCAGTTGAGGATCAGGGACAGTGAAATCCCTAAGACGGCCTTCCGTTCTAGATACGGACATTACGAGTTCATTGTGATGTCTTTTGGGTTGACTAATGCTCCTGCAGTATTCATGGACTTGATGAACAGGGTGTTTAAGAACTTCCTAGACTCGTTCGTCATAGTTTTCATTGACGACATTTTGATCTACTCCAAAATGGAGGCTGAGCATGAGGAGCAATTGCACCAAGTTTTGGAGACTCTTCGAGCCAATAGGCTGTATGCCAAGTTCTCCAAGAGCAAGTTTTGGCTGAAGAAGGTATCTTTCCTTGGACATGTGGTGTCCAGTGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGCGGTTACCAATTGGCCTCGACCGTCTACAGTTTGCGAGATTCGTAGTTTCCTGGGCTTGGCAGGTTACTATAGGAGGTTCATGGAAGACTTCTCACGTATAGCCAGCCCCTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTATTTGGAGCCCAGCTTGCGAGAGCATCTTCCAGGAGCTTAAGCAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGGTCGGGAAGTTTTGTGATCTACAGTGATGCCTCCAAAAAGGGACTGGGATGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCTGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCACGACTTAGAGTTGGCAGCAGTGGTTTTTGCACTGAAGATATGGAGGCACTATCTGTACGGCGAGAAGATACAGATTTTCACTGACCATAAGAGCCTGAAGTATTTCTTCACCCAGAAGGAGCTGAACATGAGGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACTGCGAGATTCTGTACCACCCAGGTAAGGCAAATGTAGTAGCTGACGCACTGAGTAAGAAGGTTGCACATTCAGCAGCACTGATCACCAAGCAAGCCCCCTTACTTAGAGATTTTGAGAGAGCCGAGATTGCAGTTTCAGTAGGAGAGGTTACCTCACAGTTGGCTCAGTTGTCAGTACAGCCGACCTTGAGGCAGAGGATTATCGTTGCTCAGCTAAATGATCCTTATTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGCAAGGTGAGGATTTCTCCATATTCTCTAACGATGGCCTTACGTTTGAGGGACGCTTGTGTGTGCCGGAAGACAGTGCAGTCAAGACAGAGCTTTTGA

Coding sequence (CDS)

ATGTTGTTTGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAATAAGGTGACAGTCAAGAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTATCTTTTCTAAGATCGACCTGCGAACAGGCTATCACCAGTTGAGGATCAGGGACAGTGAAATCCCTAAGACGGCCTTCCGTTCTAGATACGGACATTACGAGTTCATTGTGATGTCTTTTGGGTTGACTAATGCTCCTGCAGTATTCATGGACTTGATGAACAGGGTGTTTAAGAACTTCCTAGACTCGTTCGTCATAGTTTTCATTGACGACATTTTGATCTACTCCAAAATGGAGGCTGAGCATGAGGAGCAATTGCACCAAGTTTTGGAGACTCTTCGAGCCAATAGGCTGTATGCCAAGTTCTCCAAGAGCAAGTTTTGGCTGAAGAAGGTATCTTTCCTTGGACATGTGGTGTCCAGTGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGCGGTTACCAATTGGCCTCGACCGTCTACAGTTTGCGAGATTCGTAGTTTCCTGGGCTTGGCAGGTTACTATAGGAGGTTCATGGAAGACTTCTCACGTATAGCCAGCCCCTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTATTTGGAGCCCAGCTTGCGAGAGCATCTTCCAGGAGCTTAAGCAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGGTCGGGAAGTTTTGTGATCTACAGTGATGCCTCCAAAAAGGGACTGGGATGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCTGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCACGACTTAGAGTTGGCAGCAGTGGTTTTTGCACTGAAGATATGGAGGCACTATCTGTACGGCGAGAAGATACAGATTTTCACTGACCATAAGAGCCTGAAGTATTTCTTCACCCAGAAGGAGCTGAACATGAGGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACTGCGAGATTCTGTACCACCCAGGTAAGGCAAATGTAGTAGCTGACGCACTGAGTAAGAAGGTTGCACATTCAGCAGCACTGATCACCAAGCAAGCCCCCTTACTTAGAGATTTTGAGAGAGCCGAGATTGCAGTTTCAGTAGGAGAGGTTACCTCACAGTTGGCTCAGTTGTCAGTACAGCCGACCTTGAGGCAGAGGATTATCGTTGCTCAGCTAAATGATCCTTATTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGCAAGGTGAGGATTTCTCCATATTCTCTAACGATGGCCTTACGTTTGAGGGACGCTTGTGTGTGCCGGAAGACAGTGCAGTCAAGACAGAGCTTTTGA

Protein sequence

MLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATIFSKIDLRTGYHQLRIRDSEIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKNFLDSFVIVFIDDILIYSKMEAEHEEQLHQVLETLRANRLYAKFSKSKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVCEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFIWSPACESIFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGKVRISPYSLTMALRLRDACVCRKTVQSRQSF
Homology
BLAST of Cmc12g0319591 vs. NCBI nr
Match: KAA0063946.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 829.7 bits (2142), Expect = 1.3e-236
Identity = 412/439 (93.85%), Postives = 429/439 (97.72%), Query Frame = 0

Query: 1    MLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATIFSKIDLRTGYHQLR 60
            +LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT+FSKIDLR+GYHQLR
Sbjct: 857  VLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR 916

Query: 61   IRDSEIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKNFLDSFVIVFIDDILIY 120
            IRDS+IPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIY
Sbjct: 917  IRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIY 976

Query: 121  SKMEAEHEEQLHQVLETLRANRLYAKFSKSKFWLKKVSFLGHVVSSEGVSVDPAKIEAVT 180
            SK EAEHEE LHQVLETLRAN+LYAKFSK +FWL+KV+FLGHVVSSEGVSVDPAKIEAVT
Sbjct: 977  SKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVT 1036

Query: 181  NWPRPSTVCEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFIWSPACESIFQELKQ 240
            NWPRPSTV EIRSFLGLAGYYRRF+EDFSR ASPLTQLTRKGTPF+WSPACES FQELKQ
Sbjct: 1037 NWPRPSTVSEIRSFLGLAGYYRRFVEDFSRKASPLTQLTRKGTPFVWSPACESSFQELKQ 1096

Query: 241  KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLEL 300
            KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYAS QLKSHEQNYPTHDLEL
Sbjct: 1097 KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLEL 1156

Query: 301  AAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG 360
            AAVVFALKIWR YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWL+LVKDYDCEI+YHP 
Sbjct: 1157 AAVVFALKIWRRYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLKLVKDYDCEIMYHPS 1216

Query: 361  KANVVADALSKKVAHSAALITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQRII 420
            KANVVADALS+KVAHSAALITKQ PLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQ+II
Sbjct: 1217 KANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKII 1276

Query: 421  VAQLNDPYLVEKRRLVETG 440
            VAQLNDPYLVEKRR+VETG
Sbjct: 1277 VAQLNDPYLVEKRRMVETG 1295

BLAST of Cmc12g0319591 vs. NCBI nr
Match: TYK05193.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 828.2 bits (2138), Expect = 3.6e-236
Identity = 410/439 (93.39%), Postives = 428/439 (97.49%), Query Frame = 0

Query: 1    MLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATIFSKIDLRTGYHQLR 60
            +LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT+FSKIDLR+GYHQLR
Sbjct: 674  VLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR 733

Query: 61   IRDSEIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKNFLDSFVIVFIDDILIY 120
            IRD +IPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIY
Sbjct: 734  IRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIY 793

Query: 121  SKMEAEHEEQLHQVLETLRANRLYAKFSKSKFWLKKVSFLGHVVSSEGVSVDPAKIEAVT 180
            SK EAEHEE LHQVLETLRAN+LYAKFSK +FWL+KV+FLGHVVSSEGVSVDP KIEAVT
Sbjct: 794  SKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPTKIEAVT 853

Query: 181  NWPRPSTVCEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFIWSPACESIFQELKQ 240
            NWPRPSTV EIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPF+WSPACES FQELKQ
Sbjct: 854  NWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQ 913

Query: 241  KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLEL 300
            KLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYAS QLKSHEQNYPTHDLEL
Sbjct: 914  KLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLEL 973

Query: 301  AAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG 360
            AAVVFALKIWR YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWL+LVKDYDCEI+YHP 
Sbjct: 974  AAVVFALKIWRRYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLKLVKDYDCEIMYHPS 1033

Query: 361  KANVVADALSKKVAHSAALITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQRII 420
            KANVVADALS+KVAHSAALITKQ PLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQ+II
Sbjct: 1034 KANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKII 1093

Query: 421  VAQLNDPYLVEKRRLVETG 440
            VAQLNDPYLVEKRR+VETG
Sbjct: 1094 VAQLNDPYLVEKRRMVETG 1112

BLAST of Cmc12g0319591 vs. NCBI nr
Match: KAA0060745.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 826.6 bits (2134), Expect = 1.1e-235
Identity = 408/440 (92.73%), Postives = 428/440 (97.27%), Query Frame = 0

Query: 1    MLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATIFSKIDLRTGYHQLR 60
            +LFVKKKDGSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGAT+FSKIDLR+GYHQLR
Sbjct: 603  VLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLR 662

Query: 61   IRDSEIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKNFLDSFVIVFIDDILIY 120
            IRD +IPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIY
Sbjct: 663  IRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIY 722

Query: 121  SKMEAEHEEQLHQVLETLRANRLYAKFSKSKFWLKKVSFLGHVVSSEGVSVDPAKIEAVT 180
            SK EAEHEE LHQVLETLRAN+LYAKFSK +FWL+KV+FLGHVVSSEGVSVDPAKIEAVT
Sbjct: 723  SKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVT 782

Query: 181  NWPRPSTVCEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFIWSPACESIFQELKQ 240
            NWPRPSTV EIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPF+WSPACES FQELKQ
Sbjct: 783  NWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQ 842

Query: 241  KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLEL 300
            KLV APVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYAS QLK HEQNYPTHDLEL
Sbjct: 843  KLVIAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLEL 902

Query: 301  AAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG 360
            AAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG
Sbjct: 903  AAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG 962

Query: 361  KANVVADALSKKVAHSAALITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQRII 420
            KANVVADALS+KVAHSAALITKQ PLLRDFERAEIAVSVGEVT+QLAQLSVQPTLRQ+II
Sbjct: 963  KANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKII 1022

Query: 421  VAQLNDPYLVEKRRLVETGK 441
             AQLNDPYL EKRR+VETG+
Sbjct: 1023 AAQLNDPYLAEKRRMVETGQ 1042

BLAST of Cmc12g0319591 vs. NCBI nr
Match: KAA0066951.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 825.9 bits (2132), Expect = 1.8e-235
Identity = 408/440 (92.73%), Postives = 428/440 (97.27%), Query Frame = 0

Query: 1   MLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATIFSKIDLRTGYHQLR 60
           + FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT+FSKIDLR+GYHQLR
Sbjct: 439 LFFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR 498

Query: 61  IRDSEIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKNFLDSFVIVFIDDILIY 120
           IRD +I KTAFRSRYGHY+F+VMSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIY
Sbjct: 499 IRDGDISKTAFRSRYGHYKFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIY 558

Query: 121 SKMEAEHEEQLHQVLETLRANRLYAKFSKSKFWLKKVSFLGHVVSSEGVSVDPAKIEAVT 180
           SK EAEHEE LHQVLETLRAN+LYAKFSK +FWL+KV+FLGHVVSSEGVSVDPAKIEAVT
Sbjct: 559 SKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVT 618

Query: 181 NWPRPSTVCEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFIWSPACESIFQELKQ 240
           NWPRPSTV EIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPF+WSPACES FQELKQ
Sbjct: 619 NWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQ 678

Query: 241 KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLEL 300
           KLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYAS QLK HEQNYPTHDLEL
Sbjct: 679 KLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKVHEQNYPTHDLEL 738

Query: 301 AAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG 360
           AAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG
Sbjct: 739 AAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG 798

Query: 361 KANVVADALSKKVAHSAALITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQRII 420
           KANVVADALS+KVAHSAALITKQ PLLRDFERAEIAVSVGEVT+QLAQLSVQPTLRQ+II
Sbjct: 799 KANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKII 858

Query: 421 VAQLNDPYLVEKRRLVETGK 441
            AQLNDPYLVEKRR+VETG+
Sbjct: 859 AAQLNDPYLVEKRRMVETGQ 878

BLAST of Cmc12g0319591 vs. NCBI nr
Match: KAA0040547.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 825.1 bits (2130), Expect = 3.1e-235
Identity = 408/440 (92.73%), Postives = 427/440 (97.05%), Query Frame = 0

Query: 1    MLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATIFSKIDLRTGYHQLR 60
            +LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT+FSKIDLR+GYHQLR
Sbjct: 638  VLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR 697

Query: 61   IRDSEIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKNFLDSFVIVFIDDILIY 120
            IRD +IPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIY
Sbjct: 698  IRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIY 757

Query: 121  SKMEAEHEEQLHQVLETLRANRLYAKFSKSKFWLKKVSFLGHVVSSEGVSVDPAKIEAVT 180
            SK EAEHEE LHQVLETLRAN LYAKFSK +FWL+KV+FLGHVVSSEGVSVDPAKIEAVT
Sbjct: 758  SKTEAEHEEHLHQVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVT 817

Query: 181  NWPRPSTVCEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFIWSPACESIFQELKQ 240
            NWPRPSTV EI+SFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPF+WSPACES FQELKQ
Sbjct: 818  NWPRPSTVSEIQSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQ 877

Query: 241  KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLEL 300
            KLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYAS QLK +EQNYPTHDLEL
Sbjct: 878  KLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIYEQNYPTHDLEL 937

Query: 301  AAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG 360
             AVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG
Sbjct: 938  VAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG 997

Query: 361  KANVVADALSKKVAHSAALITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQRII 420
            KANVVADALS+KVAHSA LITKQ PLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQ+II
Sbjct: 998  KANVVADALSRKVAHSAVLITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKII 1057

Query: 421  VAQLNDPYLVEKRRLVETGK 441
             AQLNDPYLVEKRR+VETG+
Sbjct: 1058 AAQLNDPYLVEKRRMVETGQ 1077

BLAST of Cmc12g0319591 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 8.5e-79
Identity = 148/372 (39.78%), Postives = 229/372 (61.56%), Query Frame = 0

Query: 5   KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATIFSKIDLRTGYHQLR 64
           KK+D S     R+ IDYR+LN++TV +R+P+P +D++  +L     F+ IDL  G+HQ+ 
Sbjct: 252 KKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIE 311

Query: 65  IRDSEIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKNFLDSFVIVFIDDILIY 124
           +    + KTAF +++GHYE++ M FGL NAPA F   MN + +  L+   +V++DDI+++
Sbjct: 312 MDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVF 371

Query: 125 SKMEAEHEEQLHQVLETLRANRLYAKFSKSKFWLKKVSFLGHVVSSEGVSVDPAKIEAVT 184
           S    EH + L  V E L    L  +  K +F  ++ +FLGHV++ +G+  +P KIEA+ 
Sbjct: 372 STSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQ 431

Query: 185 NWPRPSTVCEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPF-IWSPACESIFQELK 244
            +P P+   EI++FLGL GYYR+F+ +F+ IA P+T+  +K       +P  +S F++LK
Sbjct: 432 KYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLK 491

Query: 245 QKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLE 304
             +   P+L VPD +  F + +DAS   LG VL Q G  ++Y S  L  HE NY T + E
Sbjct: 492 YLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKE 551

Query: 305 LAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 364
           L A+V+A K +RHYL G   +I +DH+ L + +  K+ N +  RW   + ++D +I Y  
Sbjct: 552 LLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIK 611

Query: 365 GKANVVADALSK 372
           GK N VADALS+
Sbjct: 612 GKENCVADALSR 623

BLAST of Cmc12g0319591 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 8.8e-76
Identity = 147/373 (39.41%), Postives = 225/373 (60.32%), Query Frame = 0

Query: 5   KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATIFSKIDLRTGYHQLR 64
           KK D S     R+ IDYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G+HQ+ 
Sbjct: 251 KKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIE 310

Query: 65  IRDSEIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKNFLDSFVIVFIDDILIY 124
           + +  I KTAF ++ GHYE++ M FGL NAPA F   MN + +  L+   +V++DDI+I+
Sbjct: 311 MDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIF 370

Query: 125 SKMEAEHEEQLHQVLETLRANRLYAKFSKSKFWLKKVSFLGHVVSSEGVSVDPAKIEAVT 184
           S    EH   +  V   L    L  +  K +F  K+ +FLGH+V+ +G+  +P K++A+ 
Sbjct: 371 STSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIV 430

Query: 185 NWPRPSTVCEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFIWSPACESI--FQEL 244
           ++P P+   EIR+FLGL GYYR+F+ +++ IA P+T   +K T  I +   E I  F++L
Sbjct: 431 SYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTK-IDTQKLEYIEAFEKL 490

Query: 245 KQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDL 304
           K  ++  P+L +PD    FV+ +DAS   LG VL Q G  +++ S  L  HE NY   + 
Sbjct: 491 KALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEK 550

Query: 305 ELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH 364
           EL A+V+A K +RHYL G +  I +DH+ L++    KE   +  RW   + +Y  +I Y 
Sbjct: 551 ELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYI 610

Query: 365 PGKANVVADALSK 372
            GK N VADALS+
Sbjct: 611 KGKENSVADALSR 622

BLAST of Cmc12g0319591 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.0e-72
Identity = 135/376 (35.90%), Postives = 225/376 (59.84%), Query Frame = 0

Query: 12  RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATIFSKIDLRTGYHQLRIRDSEIPKTAF 71
           R+ +D++ LN VT+ + YP+P I+     L  A  F+ +DL +G+HQ+ +++S+IPKTAF
Sbjct: 179 RMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAF 238

Query: 72  RSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKNFLDSFVIVFIDDILIYSKMEAEHEEQL 131
            +  G YEF+ + FGL NAPA+F  +++ + +  +     V+IDDI+++S+    H + L
Sbjct: 239 STLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNL 298

Query: 132 HQVLETLRANRLYAKFSKSKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVCEI 191
             VL +L    L     KS F   +V FLG++V+++G+  DP K+ A++  P P++V E+
Sbjct: 299 RLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKEL 358

Query: 192 RSFLGLAGYYRRFMEDFSRIASPLTQLTR-----------KGTPFIWSPACESIFQELKQ 251
           + FLG+  YYR+F++D++++A PLT LTR              P          F +LK 
Sbjct: 359 KRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKS 418

Query: 252 KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASCQLKSHEQNYPTH 311
            L ++ +L  P  +  F + +DAS   +G VL Q    + + +AY S  L   E+NY T 
Sbjct: 419 ILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATI 478

Query: 312 DLELAAVVFALKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 371
           + E+ A++++L   R YLYG   I+++TDH+ L +    +  N + +RW   +++Y+CE+
Sbjct: 479 EKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCEL 538

BLAST of Cmc12g0319591 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.5e-70
Identity = 150/439 (34.17%), Postives = 244/439 (55.58%), Query Frame = 0

Query: 1   MLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATIFSKIDLRTGYHQLR 60
           ++FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+TIF+K+DL++ YH +R
Sbjct: 452 VMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIR 511

Query: 61  IRDSEIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKNFLDSFVIVFIDDILIY 120
           +R  +  K AFR   G +E++VM +G++ APA F   +N +     +S V+ ++DDILI+
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIH 571

Query: 121 SKMEAEHEEQLHQVLETLRANRLYAKFSKSKFWLKKVSFLGHVVSSEGVSVDPAKIEAVT 180
           SK E+EH + +  VL+ L+   L    +K +F   +V F+G+ +S +G +     I+ V 
Sbjct: 572 SKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVL 631

Query: 181 NWPRPSTVCEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFIWSPACESIFQELKQ 240
            W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P      + +KQ
Sbjct: 632 QWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQ 691

Query: 241 KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASCQLKSHEQNYPT 300
            LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY  
Sbjct: 692 CLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSV 751

Query: 301 HDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDY 360
            D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D+
Sbjct: 752 SDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDF 811

Query: 361 DCEILYHPGKANVVADALSKKVAHSAALITKQAPLLRDFERAEIAVSVGEVTSQLAQLSV 420
           + EI Y PG AN +ADALS+       ++ +  P+ +D E   I        + + Q+S+
Sbjct: 812 NFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI--------NFVNQISI 871

Query: 421 QPTLRQRIIVAQLNDPYLV 431
               + +++    ND  L+
Sbjct: 872 TDDFKNQVVTEYTNDTKLL 875

BLAST of Cmc12g0319591 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.5e-70
Identity = 150/439 (34.17%), Postives = 244/439 (55.58%), Query Frame = 0

Query: 1   MLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATIFSKIDLRTGYHQLR 60
           ++FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+TIF+K+DL++ YH +R
Sbjct: 452 VMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIR 511

Query: 61  IRDSEIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKNFLDSFVIVFIDDILIY 120
           +R  +  K AFR   G +E++VM +G++ APA F   +N +     +S V+ ++DDILI+
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIH 571

Query: 121 SKMEAEHEEQLHQVLETLRANRLYAKFSKSKFWLKKVSFLGHVVSSEGVSVDPAKIEAVT 180
           SK E+EH + +  VL+ L+   L    +K +F   +V F+G+ +S +G +     I+ V 
Sbjct: 572 SKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVL 631

Query: 181 NWPRPSTVCEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFIWSPACESIFQELKQ 240
            W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P      + +KQ
Sbjct: 632 QWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQ 691

Query: 241 KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASCQLKSHEQNYPT 300
            LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY  
Sbjct: 692 CLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSV 751

Query: 301 HDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDY 360
            D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D+
Sbjct: 752 SDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDF 811

Query: 361 DCEILYHPGKANVVADALSKKVAHSAALITKQAPLLRDFERAEIAVSVGEVTSQLAQLSV 420
           + EI Y PG AN +ADALS+       ++ +  P+ +D E   I        + + Q+S+
Sbjct: 812 NFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI--------NFVNQISI 871

Query: 421 QPTLRQRIIVAQLNDPYLV 431
               + +++    ND  L+
Sbjct: 872 TDDFKNQVVTEYTNDTKLL 875

BLAST of Cmc12g0319591 vs. ExPASy TrEMBL
Match: A0A5A7VBY3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G00920 PE=4 SV=1)

HSP 1 Score: 829.7 bits (2142), Expect = 6.1e-237
Identity = 412/439 (93.85%), Postives = 429/439 (97.72%), Query Frame = 0

Query: 1    MLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATIFSKIDLRTGYHQLR 60
            +LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT+FSKIDLR+GYHQLR
Sbjct: 857  VLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR 916

Query: 61   IRDSEIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKNFLDSFVIVFIDDILIY 120
            IRDS+IPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIY
Sbjct: 917  IRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIY 976

Query: 121  SKMEAEHEEQLHQVLETLRANRLYAKFSKSKFWLKKVSFLGHVVSSEGVSVDPAKIEAVT 180
            SK EAEHEE LHQVLETLRAN+LYAKFSK +FWL+KV+FLGHVVSSEGVSVDPAKIEAVT
Sbjct: 977  SKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVT 1036

Query: 181  NWPRPSTVCEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFIWSPACESIFQELKQ 240
            NWPRPSTV EIRSFLGLAGYYRRF+EDFSR ASPLTQLTRKGTPF+WSPACES FQELKQ
Sbjct: 1037 NWPRPSTVSEIRSFLGLAGYYRRFVEDFSRKASPLTQLTRKGTPFVWSPACESSFQELKQ 1096

Query: 241  KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLEL 300
            KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYAS QLKSHEQNYPTHDLEL
Sbjct: 1097 KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLEL 1156

Query: 301  AAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG 360
            AAVVFALKIWR YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWL+LVKDYDCEI+YHP 
Sbjct: 1157 AAVVFALKIWRRYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLKLVKDYDCEIMYHPS 1216

Query: 361  KANVVADALSKKVAHSAALITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQRII 420
            KANVVADALS+KVAHSAALITKQ PLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQ+II
Sbjct: 1217 KANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKII 1276

Query: 421  VAQLNDPYLVEKRRLVETG 440
            VAQLNDPYLVEKRR+VETG
Sbjct: 1277 VAQLNDPYLVEKRRMVETG 1295

BLAST of Cmc12g0319591 vs. ExPASy TrEMBL
Match: A0A5D3BZN1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00670 PE=4 SV=1)

HSP 1 Score: 828.2 bits (2138), Expect = 1.8e-236
Identity = 410/439 (93.39%), Postives = 428/439 (97.49%), Query Frame = 0

Query: 1    MLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATIFSKIDLRTGYHQLR 60
            +LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT+FSKIDLR+GYHQLR
Sbjct: 674  VLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR 733

Query: 61   IRDSEIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKNFLDSFVIVFIDDILIY 120
            IRD +IPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIY
Sbjct: 734  IRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIY 793

Query: 121  SKMEAEHEEQLHQVLETLRANRLYAKFSKSKFWLKKVSFLGHVVSSEGVSVDPAKIEAVT 180
            SK EAEHEE LHQVLETLRAN+LYAKFSK +FWL+KV+FLGHVVSSEGVSVDP KIEAVT
Sbjct: 794  SKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPTKIEAVT 853

Query: 181  NWPRPSTVCEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFIWSPACESIFQELKQ 240
            NWPRPSTV EIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPF+WSPACES FQELKQ
Sbjct: 854  NWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQ 913

Query: 241  KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLEL 300
            KLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYAS QLKSHEQNYPTHDLEL
Sbjct: 914  KLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLEL 973

Query: 301  AAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG 360
            AAVVFALKIWR YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWL+LVKDYDCEI+YHP 
Sbjct: 974  AAVVFALKIWRRYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLKLVKDYDCEIMYHPS 1033

Query: 361  KANVVADALSKKVAHSAALITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQRII 420
            KANVVADALS+KVAHSAALITKQ PLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQ+II
Sbjct: 1034 KANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKII 1093

Query: 421  VAQLNDPYLVEKRRLVETG 440
            VAQLNDPYLVEKRR+VETG
Sbjct: 1094 VAQLNDPYLVEKRRMVETG 1112

BLAST of Cmc12g0319591 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 826.6 bits (2134), Expect = 5.1e-236
Identity = 408/440 (92.73%), Postives = 428/440 (97.27%), Query Frame = 0

Query: 1    MLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATIFSKIDLRTGYHQLR 60
            +LFVKKKDGSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGAT+FSKIDLR+GYHQLR
Sbjct: 603  VLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLR 662

Query: 61   IRDSEIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKNFLDSFVIVFIDDILIY 120
            IRD +IPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIY
Sbjct: 663  IRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIY 722

Query: 121  SKMEAEHEEQLHQVLETLRANRLYAKFSKSKFWLKKVSFLGHVVSSEGVSVDPAKIEAVT 180
            SK EAEHEE LHQVLETLRAN+LYAKFSK +FWL+KV+FLGHVVSSEGVSVDPAKIEAVT
Sbjct: 723  SKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVT 782

Query: 181  NWPRPSTVCEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFIWSPACESIFQELKQ 240
            NWPRPSTV EIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPF+WSPACES FQELKQ
Sbjct: 783  NWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQ 842

Query: 241  KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLEL 300
            KLV APVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYAS QLK HEQNYPTHDLEL
Sbjct: 843  KLVIAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLEL 902

Query: 301  AAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG 360
            AAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG
Sbjct: 903  AAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG 962

Query: 361  KANVVADALSKKVAHSAALITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQRII 420
            KANVVADALS+KVAHSAALITKQ PLLRDFERAEIAVSVGEVT+QLAQLSVQPTLRQ+II
Sbjct: 963  KANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKII 1022

Query: 421  VAQLNDPYLVEKRRLVETGK 441
             AQLNDPYL EKRR+VETG+
Sbjct: 1023 AAQLNDPYLAEKRRMVETGQ 1042

BLAST of Cmc12g0319591 vs. ExPASy TrEMBL
Match: A0A5A7VMR4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00890 PE=4 SV=1)

HSP 1 Score: 825.9 bits (2132), Expect = 8.7e-236
Identity = 408/440 (92.73%), Postives = 428/440 (97.27%), Query Frame = 0

Query: 1   MLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATIFSKIDLRTGYHQLR 60
           + FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT+FSKIDLR+GYHQLR
Sbjct: 439 LFFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR 498

Query: 61  IRDSEIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKNFLDSFVIVFIDDILIY 120
           IRD +I KTAFRSRYGHY+F+VMSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIY
Sbjct: 499 IRDGDISKTAFRSRYGHYKFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIY 558

Query: 121 SKMEAEHEEQLHQVLETLRANRLYAKFSKSKFWLKKVSFLGHVVSSEGVSVDPAKIEAVT 180
           SK EAEHEE LHQVLETLRAN+LYAKFSK +FWL+KV+FLGHVVSSEGVSVDPAKIEAVT
Sbjct: 559 SKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVT 618

Query: 181 NWPRPSTVCEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFIWSPACESIFQELKQ 240
           NWPRPSTV EIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPF+WSPACES FQELKQ
Sbjct: 619 NWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQ 678

Query: 241 KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLEL 300
           KLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYAS QLK HEQNYPTHDLEL
Sbjct: 679 KLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKVHEQNYPTHDLEL 738

Query: 301 AAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG 360
           AAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG
Sbjct: 739 AAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG 798

Query: 361 KANVVADALSKKVAHSAALITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQRII 420
           KANVVADALS+KVAHSAALITKQ PLLRDFERAEIAVSVGEVT+QLAQLSVQPTLRQ+II
Sbjct: 799 KANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKII 858

Query: 421 VAQLNDPYLVEKRRLVETGK 441
            AQLNDPYLVEKRR+VETG+
Sbjct: 859 AAQLNDPYLVEKRRMVETGQ 878

BLAST of Cmc12g0319591 vs. ExPASy TrEMBL
Match: A0A5A7TG62 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G001030 PE=4 SV=1)

HSP 1 Score: 825.1 bits (2130), Expect = 1.5e-235
Identity = 408/440 (92.73%), Postives = 427/440 (97.05%), Query Frame = 0

Query: 1    MLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATIFSKIDLRTGYHQLR 60
            +LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT+FSKIDLR+GYHQLR
Sbjct: 638  VLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR 697

Query: 61   IRDSEIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKNFLDSFVIVFIDDILIY 120
            IRD +IPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIY
Sbjct: 698  IRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIY 757

Query: 121  SKMEAEHEEQLHQVLETLRANRLYAKFSKSKFWLKKVSFLGHVVSSEGVSVDPAKIEAVT 180
            SK EAEHEE LHQVLETLRAN LYAKFSK +FWL+KV+FLGHVVSSEGVSVDPAKIEAVT
Sbjct: 758  SKTEAEHEEHLHQVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVT 817

Query: 181  NWPRPSTVCEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFIWSPACESIFQELKQ 240
            NWPRPSTV EI+SFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPF+WSPACES FQELKQ
Sbjct: 818  NWPRPSTVSEIQSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQ 877

Query: 241  KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLEL 300
            KLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYAS QLK +EQNYPTHDLEL
Sbjct: 878  KLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIYEQNYPTHDLEL 937

Query: 301  AAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG 360
             AVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG
Sbjct: 938  VAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG 997

Query: 361  KANVVADALSKKVAHSAALITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQRII 420
            KANVVADALS+KVAHSA LITKQ PLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQ+II
Sbjct: 998  KANVVADALSRKVAHSAVLITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKII 1057

Query: 421  VAQLNDPYLVEKRRLVETGK 441
             AQLNDPYLVEKRR+VETG+
Sbjct: 1058 AAQLNDPYLVEKRRMVETGQ 1077

BLAST of Cmc12g0319591 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 4.7e-24
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = 0

Query: 131 LHQVLETLRANRLYAKFSKSKFWLKKVSFLG--HVVSSEGVSVDPAKIEAVTNWPRPSTV 190
           L  VL+    ++ YA   K  F   ++++LG  H++S EGVS DPAK+EA+  WP P   
Sbjct: 4   LGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKNT 63

Query: 191 CEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFIWSPACESIFQELKQKLVTAPVL 250
            E+R FLGL GYYRRF++++ +I  PLT+L +K +   W+      F+ LK  + T PVL
Sbjct: 64  TELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPVL 123

Query: 251 TVPDGSGSFV 259
            +PD    FV
Sbjct: 124 ALPDLKLPFV 132

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0063946.11.3e-23693.85pol protein [Cucumis melo var. makuwa][more]
TYK05193.13.6e-23693.39pol protein [Cucumis melo var. makuwa][more]
KAA0060745.11.1e-23592.73pol protein [Cucumis melo var. makuwa][more]
KAA0066951.11.8e-23592.73pol protein [Cucumis melo var. makuwa][more]
KAA0040547.13.1e-23592.73pol protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
P043238.5e-7939.78Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
P208258.8e-7639.41Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
Q8I7P92.0e-7235.90Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
P0CT412.5e-7034.17Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P0CT342.5e-7034.17Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
Match NameE-valueIdentityDescription
A0A5A7VBY36.1e-23793.85Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61... [more]
A0A5D3BZN11.8e-23693.39Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14... [more]
A0A5A7V4E45.1e-23692.73Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72... [more]
A0A5A7VMR48.7e-23692.73Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55... [more]
A0A5A7TG621.5e-23592.73Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold26... [more]
Match NameE-valueIdentityDescription
ATMG00860.14.7e-2441.54DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 260..383
e-value: 8.1E-6
score: 27.7
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 255..351
e-value: 9.8E-34
score: 115.8
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 4..163
e-value: 1.1E-24
score: 87.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..164
score: 13.549389
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 1..89
e-value: 1.4E-69
score: 235.6
NoneNo IPR availablePANTHERPTHR24559:SF324TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 5..376
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 5..376
NoneNo IPR availableCDDcd01647RT_LTRcoord: 1..164
e-value: 1.96159E-81
score: 247.894
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 258..373
e-value: 3.68709E-57
score: 183.078
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 29..164
e-value: 1.4E-69
score: 235.6
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 174..259
e-value: 3.3E-31
score: 109.1
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..357

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0319591.1Cmc12g0319591.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding