Homology
BLAST of Cmc12g0318991 vs. NCBI nr
Match:
XP_008463631.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo] >XP_008463637.1 PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo] >XP_008463644.1 PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis melo])
HSP 1 Score: 869.0 bits (2244), Expect = 1.7e-248
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0
Query: 1 MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60
MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ
Sbjct: 1 MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60
Query: 61 TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120
TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP
Sbjct: 61 TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120
Query: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180
EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL
Sbjct: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180
Query: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
Query: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300
RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY
Sbjct: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300
Query: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDA 360
SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDA
Sbjct: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDA 360
Query: 361 VNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVL 420
VNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVL
Sbjct: 361 VNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVL 420
Query: 421 EDDYGNLN 429
EDDYGNLN
Sbjct: 421 EDDYGNLN 428
BLAST of Cmc12g0318991 vs. NCBI nr
Match:
XP_004147297.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial [Cucumis sativus] >XP_031736112.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial [Cucumis sativus] >XP_031736113.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial [Cucumis sativus] >KGN64750.1 hypothetical protein Csa_013140 [Cucumis sativus])
HSP 1 Score: 797.0 bits (2057), Expect = 8.2e-227
Identity = 392/428 (91.59%), Postives = 407/428 (95.09%), Query Frame = 0
Query: 1 MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60
MN L RIRIHFSTNSI+HLFNSNPSYPHF+CFRRFSIHS LNNTHH NL HFLRVSQI
Sbjct: 1 MNLLLRIRIHFSTNSIDHLFNSNPSYPHFVCFRRFSIHSWWLNNTHHYNLPHFLRVSQIH 60
Query: 61 TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120
Y PNLSFT F L FYS+ APSRSFR+RANKRLK+SLKP LDE QFQLAVSKIPPRFT
Sbjct: 61 PYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTS 120
Query: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180
EEL NVISLQ+DPLVCFELFNWASQQPRF+HD SSYEITIKKLGEAKMYEEMDHVVNQAL
Sbjct: 121 EELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQAL 180
Query: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
AVSSIGSETLYNTMIYFFTEARKLTRA+NIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
Query: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300
RNTYINH+YMETIRCLFRQMVNDDGIEPDIF+LNCMIKGYVLSLHVNDALRIFHQMGVVY
Sbjct: 241 RNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVY 300
Query: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDA 360
SCLPNSYS+DYLIHGL AQARTDNA+ELCNEMKEKGFVPSSISYNSIVNA+ALNGEVEDA
Sbjct: 301 SCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDA 360
Query: 361 VNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVL 420
VNYLWEMID+RRSPDFITYKTVLDELCR G+VVEATSLLRELQEKDLVDGHTYRKLLYVL
Sbjct: 361 VNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVL 420
Query: 421 EDDYGNLN 429
EDDYGNLN
Sbjct: 421 EDDYGNLN 428
BLAST of Cmc12g0318991 vs. NCBI nr
Match:
XP_038893505.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Benincasa hispida])
HSP 1 Score: 744.6 bits (1921), Expect = 4.8e-211
Identity = 371/428 (86.68%), Postives = 391/428 (91.36%), Query Frame = 0
Query: 1 MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60
MN L RIR FS NSIN L SNPS PHF+C RRFSIHS LN +H N+THFL SQI+
Sbjct: 1 MNLLLRIR--FSRNSINQLCKSNPSNPHFLCLRRFSIHSWWLNELNHGNITHFLPPSQIR 60
Query: 61 TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120
++PAPNL FTKFCLNFYS APSRSFRRRA+KRLK+S+KPTLD+ QFQ AVS+IPPRFT
Sbjct: 61 SHPAPNLFFTKFCLNFYSNRAPSRSFRRRASKRLKSSIKPTLDDTQFQSAVSQIPPRFTS 120
Query: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180
EEL NVISLQ DPLVCFELFNWASQQPRF+HDVS+Y ITIKKLGEAKMYEEMDHVVNQ L
Sbjct: 121 EELCNVISLQGDPLVCFELFNWASQQPRFRHDVSTYLITIKKLGEAKMYEEMDHVVNQVL 180
Query: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
+V SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 SVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
Query: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300
RN YINH+YMETIRCLFRQMVNDDGIEPDIF LN MIKGYVLSLH+NDALRIFHQMGVVY
Sbjct: 241 RNAYINHMYMETIRCLFRQMVNDDGIEPDIFTLNSMIKGYVLSLHINDALRIFHQMGVVY 300
Query: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDA 360
SCLPNS+SYDYLIHGL AQ RTDNARELCNEMKEKGFVPS ISYNSIVNAMALNGEVE+A
Sbjct: 301 SCLPNSFSYDYLIHGLCAQGRTDNARELCNEMKEKGFVPSGISYNSIVNAMALNGEVEEA 360
Query: 361 VNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVL 420
VNYLWEMID+RRSPDFITY+TVLDE CR GRV EATSLLRELQEKDLVDGHTYRKLLYVL
Sbjct: 361 VNYLWEMIDNRRSPDFITYRTVLDEQCRQGRVGEATSLLRELQEKDLVDGHTYRKLLYVL 420
Query: 421 EDDYGNLN 429
EDDYGNLN
Sbjct: 421 EDDYGNLN 426
BLAST of Cmc12g0318991 vs. NCBI nr
Match:
XP_022970418.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970419.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970420.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970421.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 729.6 bits (1882), Expect = 1.6e-206
Identity = 367/428 (85.75%), Postives = 389/428 (90.89%), Query Frame = 0
Query: 1 MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60
MN L RIRI F NSIN L NS PS P+F+C RRFS HSL L NT H N +H LR+SQIQ
Sbjct: 1 MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLL-NTDHGNFSHILRLSQIQ 60
Query: 61 TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120
YPAP LSFTKFCLNFYS APSRSFRRRA+KRLK+ +KP L+EAQFQ A+S+IPPRF
Sbjct: 61 NYPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNS 120
Query: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180
EEL NVIS+Q DPLVCFELFNWASQQ RF+HDVS+YEITIKKLGEAKMYEEMD+VVNQ L
Sbjct: 121 EELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVL 180
Query: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
AV SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
Query: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300
RN YINH+YMETIRCLFRQMVN DGIEPDIF LNCMIKGYVLSLHVNDALR+FHQMGVVY
Sbjct: 241 RNAYINHMYMETIRCLFRQMVN-DGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVY 300
Query: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDA 360
S LPNS+SYDYLIHGL AQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVE+A
Sbjct: 301 SSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEA 360
Query: 361 VNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVL 420
VNYLWEMI +RRSPDFITYKTVLDELCR GRV EATSLLRE+QEK+LVDGHTYRKLLYVL
Sbjct: 361 VNYLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVL 420
Query: 421 EDDYGNLN 429
EDDYGN+N
Sbjct: 421 EDDYGNVN 426
BLAST of Cmc12g0318991 vs. NCBI nr
Match:
XP_022965006.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 724.9 bits (1870), Expect = 4.0e-205
Identity = 366/428 (85.51%), Postives = 388/428 (90.65%), Query Frame = 0
Query: 1 MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60
MN L RIRI F NSIN L NS PS PHF+C RRFS HS L NT H N +H LR+SQIQ
Sbjct: 1 MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFL-NTDHGNFSHILRLSQIQ 60
Query: 61 TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120
YPAP LSFTKFCLNFYS +APSRSFRRRA+KRLK+ +KP L+EAQFQ A+S+IPPRF
Sbjct: 61 NYPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNS 120
Query: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180
EEL NVIS+Q DPLVCFELFNWASQQ RF+HDVS+YEITIKKLGEAKMYEEMD+VVNQ L
Sbjct: 121 EELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVL 180
Query: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
AV SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+NLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRG 240
Query: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300
RN YIN +YMETIRCLFRQMVN DGIEPDIF LNCMIKGYVLSLHVNDALRIFHQMGVVY
Sbjct: 241 RNAYINLMYMETIRCLFRQMVN-DGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVY 300
Query: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDA 360
S LPNS+SYDYLIHGL AQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVE+A
Sbjct: 301 SSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEA 360
Query: 361 VNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVL 420
VNYLWEMI +RRSPDFITYKTVLDELCR GRV EATSLLRE+QEK+LVDGHTYRKLLYVL
Sbjct: 361 VNYLWEMIGNRRSPDFITYKTVLDELCRRGRVGEATSLLREVQEKELVDGHTYRKLLYVL 420
Query: 421 EDDYGNLN 429
EDDYGN+N
Sbjct: 421 EDDYGNVN 426
BLAST of Cmc12g0318991 vs. ExPASy Swiss-Prot
Match:
Q9ZUY1 (Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g27800 PE=3 SV=2)
HSP 1 Score: 463.4 bits (1191), Expect = 2.8e-129
Identity = 223/347 (64.27%), Postives = 278/347 (80.12%), Query Frame = 0
Query: 77 YSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTPEELRNVISLQKDPLVC 136
YS + P+RS RRR + R K+S KP L+ ++F +SK+PPRFTPEEL + I+L++DP +C
Sbjct: 96 YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155
Query: 137 FELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIY 196
F LFNWASQQPRF H+ SY I I+KLG AKMY+EMD +VNQ L+V IG+E LYN++I+
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF 215
Query: 197 FFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHVYMETIRCL 256
+FT+A KL RA+NIF+HM ++NL CRP+IRTY++LF A L RG N+YINHVYMET+R L
Sbjct: 216 YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSL 275
Query: 257 FRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSYDYLIHGL 316
FRQMV D GIEPD+FALNC++KGYVLSLHVNDALRIFHQM VVY C PNS++YDYLIHGL
Sbjct: 276 FRQMV-DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 335
Query: 317 SAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDAVNYLWEMIDHRRSPDF 376
AQ RT NAREL +EMK KGFVP+ SYNS+VNA AL+GE++DAV LWEMI++ R DF
Sbjct: 336 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 395
Query: 377 ITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVLEDD 424
I+Y+T++DE CR G+ EAT LL L+EK LVD +Y KL+ VL D
Sbjct: 396 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNVLHKD 441
BLAST of Cmc12g0318991 vs. ExPASy Swiss-Prot
Match:
Q9LSF5 (Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g25210 PE=2 SV=1)
HSP 1 Score: 183.7 bits (465), Expect = 4.3e-45
Identity = 111/354 (31.36%), Postives = 189/354 (53.39%), Query Frame = 0
Query: 66 NLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTPEELRN 125
+LSF+ + S T+PSR R T E QF+ + + P FT ++
Sbjct: 33 SLSFSSVSSSPESHTSPSRIRTR------------TPLETQFETWIQNLKPGFTNSDVVI 92
Query: 126 VISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQALAVSSI 185
+ Q DP + ++F W +QQ +KH+ +Y IK+ K ++ ++ + +A +
Sbjct: 93 ALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACE 152
Query: 186 GSETLYNTMIYFFTEARKL-TRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTY 245
S LYN +I F + L RA +++ M R+ + +P + TY LL ++ L R
Sbjct: 153 MSVPLYNCIIRFCCGRKFLFNRAFDVYNKML--RSDDSKPDLETYTLLLSSLLKRFNKLN 212
Query: 246 INHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVYSCLP 305
+ +VY+ +R L +QM +G+ PD F LN +IK Y L V++A+R+F +M +Y P
Sbjct: 213 VCYVYLHAVRSLTKQM-KSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEM-ALYGSEP 272
Query: 306 NSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDAVNYL 365
N+Y+Y YL+ G+ + R EM+ KG VP+ Y ++ ++++ +++AV +
Sbjct: 273 NAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVV 332
Query: 366 WEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDG-HTYRKLL 418
++M+ + SPD +TY TVL ELCR GR EA ++ E +++D V G YR L+
Sbjct: 333 YDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLM 370
BLAST of Cmc12g0318991 vs. ExPASy Swiss-Prot
Match:
Q8LDU5 (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01400 PE=2 SV=2)
HSP 1 Score: 114.0 bits (284), Expect = 4.2e-24
Identity = 76/299 (25.42%), Postives = 151/299 (50.50%), Query Frame = 0
Query: 104 EAQFQLAVSKIPPRFTPEELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKL 163
EA+ + + P +P ++ +I+ Q DPL+ E+F++ASQQP F+H SS+ I I KL
Sbjct: 35 EARKPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKL 94
Query: 164 GEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCR 223
G + + +D V+ + + + ++ +I + EA+ + ++ F M N
Sbjct: 95 GRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKM---LEFNFT 154
Query: 224 PSIRTYNLLFTAFLSRGRNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLS 283
P + N + +S + Y++ LF+ G+ P+ + N +++ + L+
Sbjct: 155 PQPKHLNRILDVLVS-------HRGYLQKAFELFKSS-RLHGVMPNTRSYNLLMQAFCLN 214
Query: 284 LHVNDALRIFHQMGVVYSCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSIS 343
++ A ++F +M + +P+ SY LI G + + + A EL ++M KGFVP +S
Sbjct: 215 DDLSIAYQLFGKM-LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLS 274
Query: 344 YNSIVNAMALNGEVEDAVNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLREL 403
Y +++N++ ++ +A L M +PD + Y T++ CR R ++A +L ++
Sbjct: 275 YTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDM 321
BLAST of Cmc12g0318991 vs. ExPASy Swiss-Prot
Match:
Q9ZUU3 (Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana OX=3702 GN=At2g37230 PE=2 SV=1)
HSP 1 Score: 112.8 bits (281), Expect = 9.3e-24
Identity = 87/337 (25.82%), Postives = 155/337 (45.99%), Query Frame = 0
Query: 87 RRRANKRLKASLKPTLDE----AQFQLAVSKIPPRFTPEELRNVISLQKDPLVCFELFNW 146
+R+ +++L+ ++ +D + Q ++ + P + + NV+ K + F W
Sbjct: 80 KRQNHEKLEDTICRMMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRW 139
Query: 147 ASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEAR 206
+ +HD ++ IK LGE ++ E ++ +I + +A
Sbjct: 140 TERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAG 199
Query: 207 KLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHVYMETIRCLFRQMVN 266
+ ++ IF+ M ++L +I++YN LF L RGR YM R F +MV+
Sbjct: 200 IVQESVKIFQKM---KDLGVERTIKSYNSLFKVILRRGR-------YMMAKR-YFNKMVS 259
Query: 267 DDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSYDYLIHGLSAQART 326
+G+EP N M+ G+ LSL + ALR F M P+ +++ +I+G +
Sbjct: 260 -EGVEPTRHTYNLMLWGFFLSLRLETALRFFEDM-KTRGISPDDATFNTMINGFCRFKKM 319
Query: 327 DNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDAVNYLWEMIDHRRSPDFITYKTV 386
D A +L EMK PS +SY +++ V+D + EM P+ TY T+
Sbjct: 320 DEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTL 379
Query: 387 LDELCRLGRVVEATSLLRELQEKDLV--DGHTYRKLL 418
L LC G++VEA ++L+ + K + D + KLL
Sbjct: 380 LPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLL 403
BLAST of Cmc12g0318991 vs. ExPASy Swiss-Prot
Match:
Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)
HSP 1 Score: 109.4 bits (272), Expect = 1.0e-22
Identity = 79/338 (23.37%), Postives = 149/338 (44.08%), Query Frame = 0
Query: 116 PRFTPEELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHV 175
P P+ + VI QKDP+ E+FN ++ FKH +S+Y I+KLG +E M+ V
Sbjct: 3 PPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEV 62
Query: 176 -VNQALAVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFT 235
V+ V + E +Y + + K+ A+N+F+ M +C P++ +YN + +
Sbjct: 63 LVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMD---FYDCEPTVFSYNAIMS 122
Query: 236 AFLSRGRNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFH 295
+ G + VYM + D GI PD+++ +K + + + ALR+ +
Sbjct: 123 VLVDSGYFDQAHKVYMR---------MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLN 182
Query: 296 QMG--------VVYSCLPNSY--------------------------SYDYLIHGLSAQA 355
M V Y + + +++ L+ L +
Sbjct: 183 NMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKG 242
Query: 356 RTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDAVNYLWEMIDHRRSPDFITYK 415
+L +++ ++G +P+ +YN + + GE++ AV + +I+ PD ITY
Sbjct: 243 DVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYN 302
Query: 416 TVLDELCRLGRVVEATSLLRELQEKDL-VDGHTYRKLL 418
++ LC+ + EA L ++ + L D +TY L+
Sbjct: 303 NLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
BLAST of Cmc12g0318991 vs. ExPASy TrEMBL
Match:
A0A1S3CJQ6 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103501729 PE=4 SV=1)
HSP 1 Score: 869.0 bits (2244), Expect = 8.2e-249
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0
Query: 1 MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60
MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ
Sbjct: 1 MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60
Query: 61 TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120
TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP
Sbjct: 61 TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120
Query: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180
EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL
Sbjct: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180
Query: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
Query: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300
RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY
Sbjct: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300
Query: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDA 360
SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDA
Sbjct: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDA 360
Query: 361 VNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVL 420
VNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVL
Sbjct: 361 VNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVL 420
Query: 421 EDDYGNLN 429
EDDYGNLN
Sbjct: 421 EDDYGNLN 428
BLAST of Cmc12g0318991 vs. ExPASy TrEMBL
Match:
A0A0A0LS50 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G086930 PE=4 SV=1)
HSP 1 Score: 797.0 bits (2057), Expect = 4.0e-227
Identity = 392/428 (91.59%), Postives = 407/428 (95.09%), Query Frame = 0
Query: 1 MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60
MN L RIRIHFSTNSI+HLFNSNPSYPHF+CFRRFSIHS LNNTHH NL HFLRVSQI
Sbjct: 1 MNLLLRIRIHFSTNSIDHLFNSNPSYPHFVCFRRFSIHSWWLNNTHHYNLPHFLRVSQIH 60
Query: 61 TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120
Y PNLSFT F L FYS+ APSRSFR+RANKRLK+SLKP LDE QFQLAVSKIPPRFT
Sbjct: 61 PYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTS 120
Query: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180
EEL NVISLQ+DPLVCFELFNWASQQPRF+HD SSYEITIKKLGEAKMYEEMDHVVNQAL
Sbjct: 121 EELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQAL 180
Query: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
AVSSIGSETLYNTMIYFFTEARKLTRA+NIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
Query: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300
RNTYINH+YMETIRCLFRQMVNDDGIEPDIF+LNCMIKGYVLSLHVNDALRIFHQMGVVY
Sbjct: 241 RNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVY 300
Query: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDA 360
SCLPNSYS+DYLIHGL AQARTDNA+ELCNEMKEKGFVPSSISYNSIVNA+ALNGEVEDA
Sbjct: 301 SCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDA 360
Query: 361 VNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVL 420
VNYLWEMID+RRSPDFITYKTVLDELCR G+VVEATSLLRELQEKDLVDGHTYRKLLYVL
Sbjct: 361 VNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVL 420
Query: 421 EDDYGNLN 429
EDDYGNLN
Sbjct: 421 EDDYGNLN 428
BLAST of Cmc12g0318991 vs. ExPASy TrEMBL
Match:
A0A6J1I0J8 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111469407 PE=4 SV=1)
HSP 1 Score: 729.6 bits (1882), Expect = 7.8e-207
Identity = 367/428 (85.75%), Postives = 389/428 (90.89%), Query Frame = 0
Query: 1 MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60
MN L RIRI F NSIN L NS PS P+F+C RRFS HSL L NT H N +H LR+SQIQ
Sbjct: 1 MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLL-NTDHGNFSHILRLSQIQ 60
Query: 61 TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120
YPAP LSFTKFCLNFYS APSRSFRRRA+KRLK+ +KP L+EAQFQ A+S+IPPRF
Sbjct: 61 NYPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNS 120
Query: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180
EEL NVIS+Q DPLVCFELFNWASQQ RF+HDVS+YEITIKKLGEAKMYEEMD+VVNQ L
Sbjct: 121 EELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVL 180
Query: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
AV SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
Query: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300
RN YINH+YMETIRCLFRQMVN DGIEPDIF LNCMIKGYVLSLHVNDALR+FHQMGVVY
Sbjct: 241 RNAYINHMYMETIRCLFRQMVN-DGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVY 300
Query: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDA 360
S LPNS+SYDYLIHGL AQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVE+A
Sbjct: 301 SSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEA 360
Query: 361 VNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVL 420
VNYLWEMI +RRSPDFITYKTVLDELCR GRV EATSLLRE+QEK+LVDGHTYRKLLYVL
Sbjct: 361 VNYLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVL 420
Query: 421 EDDYGNLN 429
EDDYGN+N
Sbjct: 421 EDDYGNVN 426
BLAST of Cmc12g0318991 vs. ExPASy TrEMBL
Match:
A0A6J1HKI7 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111464950 PE=4 SV=1)
HSP 1 Score: 724.9 bits (1870), Expect = 1.9e-205
Identity = 366/428 (85.51%), Postives = 388/428 (90.65%), Query Frame = 0
Query: 1 MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60
MN L RIRI F NSIN L NS PS PHF+C RRFS HS L NT H N +H LR+SQIQ
Sbjct: 1 MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFL-NTDHGNFSHILRLSQIQ 60
Query: 61 TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120
YPAP LSFTKFCLNFYS +APSRSFRRRA+KRLK+ +KP L+EAQFQ A+S+IPPRF
Sbjct: 61 NYPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNS 120
Query: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180
EEL NVIS+Q DPLVCFELFNWASQQ RF+HDVS+YEITIKKLGEAKMYEEMD+VVNQ L
Sbjct: 121 EELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVL 180
Query: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
AV SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+NLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRG 240
Query: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300
RN YIN +YMETIRCLFRQMVN DGIEPDIF LNCMIKGYVLSLHVNDALRIFHQMGVVY
Sbjct: 241 RNAYINLMYMETIRCLFRQMVN-DGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVY 300
Query: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDA 360
S LPNS+SYDYLIHGL AQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVE+A
Sbjct: 301 SSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEA 360
Query: 361 VNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVL 420
VNYLWEMI +RRSPDFITYKTVLDELCR GRV EATSLLRE+QEK+LVDGHTYRKLLYVL
Sbjct: 361 VNYLWEMIGNRRSPDFITYKTVLDELCRRGRVGEATSLLREVQEKELVDGHTYRKLLYVL 420
Query: 421 EDDYGNLN 429
EDDYGN+N
Sbjct: 421 EDDYGNVN 426
BLAST of Cmc12g0318991 vs. ExPASy TrEMBL
Match:
A0A6J1DY00 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111024542 PE=4 SV=1)
HSP 1 Score: 699.5 bits (1804), Expect = 8.6e-198
Identity = 352/422 (83.41%), Postives = 380/422 (90.05%), Query Frame = 0
Query: 7 IRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQTYPAPN 66
+RI FS SINHL NSN S PHF+ R FS HS SL N++H N FL +SQI+ P P
Sbjct: 4 LRIQFSRISINHLRNSNLSNPHFVSLRTFSTHS-SLLNSNHGNCRSFLLLSQIRNCPVPV 63
Query: 67 LSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTPEELRNV 126
+SFTKF LNF+S APSRSFRRRA+KRLK+S+KP+LDE FQ AVS+IPPRF+PEEL NV
Sbjct: 64 VSFTKFRLNFFSSRAPSRSFRRRASKRLKSSIKPSLDETLFQAAVSQIPPRFSPEELCNV 123
Query: 127 ISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIG 186
ISLQ+DP+VCFELFNWASQQPRF+HDVS+YEITIKKLGEAKM+EEMD VVNQ LAV SIG
Sbjct: 124 ISLQEDPMVCFELFNWASQQPRFRHDVSTYEITIKKLGEAKMFEEMDDVVNQVLAVPSIG 183
Query: 187 SETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYIN 246
SETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRN YIN
Sbjct: 184 SETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYIN 243
Query: 247 HVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNS 306
H+YMETIRCLFRQMVN DGIEPDIF LNCMIKGYVLSLH+NDALRIFHQMGVVYS LPNS
Sbjct: 244 HMYMETIRCLFRQMVN-DGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSSLPNS 303
Query: 307 YSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDAVNYLWE 366
+SYDYLIHGL AQ RTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVE+AVNYLWE
Sbjct: 304 FSYDYLIHGLCAQGRTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVNYLWE 363
Query: 367 MIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVLEDDYGN 426
MI +RRS DF+TY+TVLDE+CR GRV EAT+LLRELQEKDLVDGHTYRKL YVLEDDYGN
Sbjct: 364 MIGNRRSADFVTYRTVLDEMCRQGRVGEATNLLRELQEKDLVDGHTYRKLCYVLEDDYGN 423
Query: 427 LN 429
LN
Sbjct: 424 LN 423
BLAST of Cmc12g0318991 vs. TAIR 10
Match:
AT2G27800.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 463.4 bits (1191), Expect = 2.0e-130
Identity = 223/347 (64.27%), Postives = 278/347 (80.12%), Query Frame = 0
Query: 77 YSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTPEELRNVISLQKDPLVC 136
YS + P+RS RRR + R K+S KP L+ ++F +SK+PPRFTPEEL + I+L++DP +C
Sbjct: 96 YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155
Query: 137 FELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIY 196
F LFNWASQQPRF H+ SY I I+KLG AKMY+EMD +VNQ L+V IG+E LYN++I+
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF 215
Query: 197 FFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHVYMETIRCL 256
+FT+A KL RA+NIF+HM ++NL CRP+IRTY++LF A L RG N+YINHVYMET+R L
Sbjct: 216 YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSL 275
Query: 257 FRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSYDYLIHGL 316
FRQMV D GIEPD+FALNC++KGYVLSLHVNDALRIFHQM VVY C PNS++YDYLIHGL
Sbjct: 276 FRQMV-DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 335
Query: 317 SAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDAVNYLWEMIDHRRSPDF 376
AQ RT NAREL +EMK KGFVP+ SYNS+VNA AL+GE++DAV LWEMI++ R DF
Sbjct: 336 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 395
Query: 377 ITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVLEDD 424
I+Y+T++DE CR G+ EAT LL L+EK LVD +Y KL+ VL D
Sbjct: 396 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNVLHKD 441
BLAST of Cmc12g0318991 vs. TAIR 10
Match:
AT5G27300.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 305.8 bits (782), Expect = 5.3e-83
Identity = 163/333 (48.95%), Postives = 208/333 (62.46%), Query Frame = 0
Query: 77 YSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTPEELRNVISLQKDPLVC 136
YS + P+RS RRR + R K+S KP L+E++FQ +SK+PPRFTPEEL + I+L++DP +C
Sbjct: 89 YSTSVPTRSLRRRISSRKKSSTKPILNESKFQETISKLPPRFTPEELADAITLEEDPFLC 148
Query: 137 FELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIY 196
F LFNWASQQPRF H+ SY I I+KLG AK
Sbjct: 149 FHLFNWASQQPRFTHENCSYHIAIRKLGAAK----------------------------- 208
Query: 197 FFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHVYMETIRCL 256
+ KL RA+NIF+HM N+RNL CRP++RTY++LF A L RG N++INH+YMET+R L
Sbjct: 209 ----SGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETVRSL 268
Query: 257 FRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSYDYLIHGL 316
FRQMV D GIEPD+FALNC++KG
Sbjct: 269 FRQMV-DSGIEPDVFALNCLVKG------------------------------------- 328
Query: 317 SAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDAVNYLWEMIDHRRSPDF 376
RT N REL +EMK KGFVP+ SYNS+VNA AL+GE++DAV LWEMI++ R DF
Sbjct: 329 ----RTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 346
Query: 377 ITYKTVLDELCRLGRVVEATSLLRELQEKDLVD 410
I+Y+T++DE CR G+ EAT LL L+EK LVD
Sbjct: 389 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVD 346
BLAST of Cmc12g0318991 vs. TAIR 10
Match:
AT5G27300.2 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 305.8 bits (782), Expect = 5.3e-83
Identity = 172/373 (46.11%), Postives = 221/373 (59.25%), Query Frame = 0
Query: 37 IHSLSLNNTHHCNLTHFLRVSQIQTYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKA 96
I LSL N + + S Q+ L+ C YS + P+RS RRR + R K+
Sbjct: 25 ITRLSLPNPNFTSSRFHTSSSLPQSQIEGRLASVSMCTQ-YSTSVPTRSLRRRISSRKKS 84
Query: 97 SLKPTLDEAQFQLAVSKIPPRFTPEELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSY 156
S KP L+E++FQ +SK+PPRFTPEEL + I+L++DP +CF LFNWASQQPRF H+ SY
Sbjct: 85 STKPILNESKFQETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSY 144
Query: 157 EITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQN 216
I I+KLG AK + KL RA+NIF+HM N
Sbjct: 145 HIAIRKLGAAK---------------------------------SGKLIRAVNIFRHMVN 204
Query: 217 NRNLNCRPSIRTYNLLFTAFLSRGRNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCM 276
+RNL CRP++RTY++LF A L RG N++INH+YMET+R LFRQMV D GIEPD+FALNC+
Sbjct: 205 SRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETVRSLFRQMV-DSGIEPDVFALNCL 264
Query: 277 IKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKG 336
+KG RT N REL +EMK KG
Sbjct: 265 VKG-----------------------------------------RTINTRELLSEMKGKG 321
Query: 337 FVPSSISYNSIVNAMALNGEVEDAVNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEAT 396
FVP+ SYNS+VNA AL+GE++DAV LWEMI++ R DFI+Y+T++DE CR G+ EAT
Sbjct: 325 FVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEAT 321
Query: 397 SLLRELQEKDLVD 410
LL L+EK LVD
Sbjct: 385 RLLEMLREKQLVD 321
BLAST of Cmc12g0318991 vs. TAIR 10
Match:
AT3G25210.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 183.7 bits (465), Expect = 3.1e-46
Identity = 111/354 (31.36%), Postives = 189/354 (53.39%), Query Frame = 0
Query: 66 NLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTPEELRN 125
+LSF+ + S T+PSR R T E QF+ + + P FT ++
Sbjct: 33 SLSFSSVSSSPESHTSPSRIRTR------------TPLETQFETWIQNLKPGFTNSDVVI 92
Query: 126 VISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQALAVSSI 185
+ Q DP + ++F W +QQ +KH+ +Y IK+ K ++ ++ + +A +
Sbjct: 93 ALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACE 152
Query: 186 GSETLYNTMIYFFTEARKL-TRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTY 245
S LYN +I F + L RA +++ M R+ + +P + TY LL ++ L R
Sbjct: 153 MSVPLYNCIIRFCCGRKFLFNRAFDVYNKML--RSDDSKPDLETYTLLLSSLLKRFNKLN 212
Query: 246 INHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVYSCLP 305
+ +VY+ +R L +QM +G+ PD F LN +IK Y L V++A+R+F +M +Y P
Sbjct: 213 VCYVYLHAVRSLTKQM-KSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEM-ALYGSEP 272
Query: 306 NSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDAVNYL 365
N+Y+Y YL+ G+ + R EM+ KG VP+ Y ++ ++++ +++AV +
Sbjct: 273 NAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVV 332
Query: 366 WEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDG-HTYRKLL 418
++M+ + SPD +TY TVL ELCR GR EA ++ E +++D V G YR L+
Sbjct: 333 YDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLM 370
BLAST of Cmc12g0318991 vs. TAIR 10
Match:
AT4G01400.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 40053 Blast hits to 12380 proteins in 263 species: Archae - 4; Bacteria - 27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses - 0; Other Eukaryotes - 935 (source: NCBI BLink). )
HSP 1 Score: 114.0 bits (284), Expect = 3.0e-25
Identity = 76/299 (25.42%), Postives = 151/299 (50.50%), Query Frame = 0
Query: 104 EAQFQLAVSKIPPRFTPEELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKL 163
EA+ + + P +P ++ +I+ Q DPL+ E+F++ASQQP F+H SS+ I I KL
Sbjct: 35 EARKPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKL 94
Query: 164 GEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCR 223
G + + +D V+ + + + ++ +I + EA+ + ++ F M N
Sbjct: 95 GRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKM---LEFNFT 154
Query: 224 PSIRTYNLLFTAFLSRGRNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLS 283
P + N + +S + Y++ LF+ G+ P+ + N +++ + L+
Sbjct: 155 PQPKHLNRILDVLVS-------HRGYLQKAFELFKSS-RLHGVMPNTRSYNLLMQAFCLN 214
Query: 284 LHVNDALRIFHQMGVVYSCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSIS 343
++ A ++F +M + +P+ SY LI G + + + A EL ++M KGFVP +S
Sbjct: 215 DDLSIAYQLFGKM-LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLS 274
Query: 344 YNSIVNAMALNGEVEDAVNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLREL 403
Y +++N++ ++ +A L M +PD + Y T++ CR R ++A +L ++
Sbjct: 275 YTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDM 321
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008463631.1 | 1.7e-248 | 100.00 | PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-... | [more] |
XP_004147297.1 | 8.2e-227 | 91.59 | pentatricopeptide repeat-containing protein At2g27800, mitochondrial [Cucumis sa... | [more] |
XP_038893505.1 | 4.8e-211 | 86.68 | pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Benin... | [more] |
XP_022970418.1 | 1.6e-206 | 85.75 | pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucur... | [more] |
XP_022965006.1 | 4.0e-205 | 85.51 | pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
Q9ZUY1 | 2.8e-129 | 64.27 | Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidop... | [more] |
Q9LSF5 | 4.3e-45 | 31.36 | Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidop... | [more] |
Q8LDU5 | 4.2e-24 | 25.42 | Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidop... | [more] |
Q9ZUU3 | 9.3e-24 | 25.82 | Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana OX... | [more] |
Q9CA58 | 1.0e-22 | 23.37 | Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3CJQ6 | 8.2e-249 | 100.00 | pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cuc... | [more] |
A0A0A0LS50 | 4.0e-227 | 91.59 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G086930 PE=4 SV=1 | [more] |
A0A6J1I0J8 | 7.8e-207 | 85.75 | pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cuc... | [more] |
A0A6J1HKI7 | 1.9e-205 | 85.51 | pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cuc... | [more] |
A0A6J1DY00 | 8.6e-198 | 83.41 | pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Momordic... | [more] |
Match Name | E-value | Identity | Description | |
AT2G27800.1 | 2.0e-130 | 64.27 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G27300.1 | 5.3e-83 | 48.95 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT5G27300.2 | 5.3e-83 | 46.11 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT3G25210.1 | 3.1e-46 | 31.36 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G01400.3 | 3.0e-25 | 25.42 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |