Cmc12g0318371 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0318371
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr12: 3473043 .. 3477658 (+)
RNA-Seq ExpressionCmc12g0318371
SyntenyCmc12g0318371
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATACCATTTAGGGTCGGATGCCAACTGCTATTTATAGTGAAAGATAATAATTAATAATGCCTGCACAGGCATTATTAACCTTCACTATTGTCTTCACAGTGGTCCAACAATAATTGATAATACAGTAGATTTTTAGAATGGCCGACAGGACAGGACCCCTGTCTTGGCTTTTTCTAAGAATCTTTTCTTTTTGAAAATTAAAACTAGTGGGACAGGACCCCCACTATGATAGAAAGCATTTAAAGAAAGCAGAAGCGATAAATGCGATATGTCTGCTGTTTGTCCTTCTCTTCAAAATGAAACTTATTAGGGAAGATAATGACGTCACCCGATTGTCTTCTGCCTGGCATGGAATATAATTCTTGATAGATTAATTTCTCTCTTTGTAGCGCACATGCTCCCAGTTTGGTCTTACTACGGCTTCCCGCCTGGCCGCCAATGGAGCGCCCGTAGGCCCTGCTACAAAAATTAAAATTAATTTCTCAAGAATTCTCCTGGAAATAATCCCATCCAGAGTTATTCCTCTACGCCGCCTGCGTTGCCTGAGGTTGGTGAATCCTCTGCAGAAGTGTATCATCTTCGTCATGGAGTCTTCTCTTTCAAATGTTCTTTTTAAAGAAAGTTGAAATCAGCAGACTGTTAAAGCAAGGATAAGGTCGGAATACAATGACCTTATCTAAACAAATTTTACAAAACTTAAACAAATTAATTTACATAAATTTACAAAATTATACATAAACACTTGAAATTGAAATACACTTGAAATGTCACATATTTAGACTAATATGGTTGAGTATCCAAAAATGGATCGTTGATGTCGAGGCCTTCGTACGGGTCATAATCAAAGTCATCGACATTATTGACGGAGGCTGGAGAAACGTCCTCTGGTAAATCGTCGTTATCATCTGAGAGGTTTACAACGACGTTGTTGACAACAGAATTGAATTCCTGTTGAGTGCTTGCTCCGGCAAGGGTTGACATGACTGCGTTTTTGGTGAGGAGGAAGGCTTCGTCCTCTTGCCTAGTCATATCTTGGAGATGGACATTGGCTTTAAACCAATCTTTGATCTTGTTGACTTCGAGATGGGAGTAATTGAATTTTTCCCACCATTTGATCCTGAGGGATTTACTCAGGGCTTTGAAGTTTCCCGAAGGTCCTAGCTGGAAATTCCAGCAAAAGATCCAGGGAATTTGGAAATACAAAGCAAACCTAAACGTCTTCGAAAGTGGTGACGAATAGATACTTTGTTGGAAAAGGTGGTACGAACGTTGGACTTCTACCGGAAATATTTCCTCGGAGAGTCCAAAATACATCCACCAGTTTTGAAACCAGTTTGGGAAGTGCATTTTGTAAGCTTGCTTGCAAAATGTCACAAACCAAGAATGGTTGTAAGCTTGGAGCCAGAATACAATGTACCATGCCTTTGTATAGTCACGGTAATTGTATGAGGGTGGTTTGAAAGGGTGAGAGAATTTTCTTCCCACAAACATCCCCTGTTTCCAGTAAGACGGAGTGAGAACACGAAAAATTCTCAACTTTGAATAAATGATCTTGGAGGGATCATTTTTATCTGGGACATGAGTAATTTCAGCTGATTTGGAGTCAACTAAAATGTACTCGTAGAAAGTCCTGGTTTTTGAAAGATCTTCGGGCAAGAAATTGAACCCATGAGGAAATATTTGACTACAGACTTCTTGGACAGAAGGTCCATCGAATTCTGGTTCTATAGTTAAATCAACCATTGTAGTTTTGGTGAAATAACCATTAATTGGAGGTCTTGGCTGGAAAATCTTGGGCCTGACGATTTGAGAATACGAGGAGGGATTCCTCGGTATTGCAGACCTTGAGGAAGAAGCGGCCGGGGAAGCGGCACGCTTATTTGGAGTTGTTGGTCCAGAGGGACGCAACAATGCGGTTGAAGGAATAGGGGGAAGACTCGAAGAGTCTGATTGAATAGTTAATGTTCTTTGAGCAGAACCTTGACGTCGCCTGGATACTTGTTCAAATTGCAAATCCATGGCGTAGTTTTCTGCACTCATAGGTGTTGGTGCAGATGATTGAGCTGGGGATTTTTTCCTAGAAAGAGTAGTTTCTGAGGAGGAAGCTACTGATTGAGGTAGTCTCTGTGGACTATCGTTTTGACCGTTTTGCGGTGGCTGCCGCTGGTTCGGTGGCCGTTGCCGGCCCGGAGGTGGTTCCATTTGGCTGAGGATTCAATGCTGAGGAGGTGGTTTTCAAGAGATGTTCTCTTGAGAGGTAATCAGCAAGTGAATTCTCACTCCCTTTTATAGGCTCAATTTTGAAATCAAAGCAAGATAAGATTGCTTGCCATCTTGCAAAGATTTGCTTGGAGATAAGATTCTTGACATCTTTTTCAAAGATGAATTTGCTTGCCTTTGAATCAGTACGAACAAGAAATTCCTTGTTGATAAGATCTCCTTGAAATTTCTGGACGGAAAGTACTATTGCCAGGACTTCCTTTTTGACGGTGGAATAGTTCTTTTGTGCACTATTCCATATTCCTGAATGATAGCGAACAACAGAGATTTTTCCGTTAAGTTCCTGTTTGAGGATGCCTCCGTAACCGATATCGGATGCATCTGTATCAATAATGAGTTTGGCCTGTTCATCCACCAAGGATAAGCATGGGATGCTTTTGGCCAAAGATTTGATTGATTGGACTGCTCGGGTGTGCTCGTCCGTCCACGGCTTTGGATTCTTTTTTAGTCTGTCGTATAATGGCAGACAAATTGAGCGGAGATTGCGGATGAAATCACCAATGTAATTTACGCAACCAAGAAATCGCTGTAGCTGCGTTTTGTCTTGTATCTCATCTGGAAATTTGTCCACAAACTCCAGAGACCGTTGGATTGGTTTGATGATTCCTTGATTAATTTCATAACCTAAGAATCTGATCTTCGTTTGAAATAACTTAATCTTTGGTTGGGATACCACAAGACCGTTGGATTTGATTACATTGAGAAAGATGCGTAGATGCTTGAAATGCTGATCTACCGTGTTGGAAAATACCAAGACATCATCAATATAGACTATTGTGAACTCTTGATATTGGTTGAAGATATCGTTCATTATCTTCTGGAATTCGGATGGAGCGTTCTTCAATCCGAATGGCATGACATTCCATTGGAACTGTCCGAATGGAACATTGAAGGCCGTCTTGTATCGGTCAGATGGGTGAATCTGGATTTGCCAAAATCCGGATTTCATGTCGAACTTTGAGAAGACCTTTGCTAAAGTAATTCTTTTTAGCAAGTCTTGGCGATTAGGAATTGGGTACCTAATCCATTTGAGAACCTTATTGAGAGGCTTGTAATTGATGACAAGCCTTGGGACGCCACGTTCCTTTTCGGCCTGGTTGTTGACGTAAAAGGCCGAACATGACCATGGGCTTTTTGATGGGCTTATTAGGCCTTTATTGAGAAGCTCTGTGATTTCGTCCTTGCAGACTTTGACCAGATCTTTATTCATTTGAATAGGCCTGGCCTTTGTAGGGATTTGGGCCTCTTTAAATCCATCCTCATATGGCAACGTTACCATATGCTTCTTTCGATCCCAAAAGGCATTTGGGAGAGTTGAACAAACCTCCTTTTCGAGCTGCCTCTGAAAGTTTTGGATCTTCGATTGGACGAGTGGCTTCTGGATTTCAATAGCCACCTTACCTGCTTTGATGTCGTCTTGAAGGAATTCGATATGTTTTTCCTTCATGGCGATCCTGTTGATGAATTGACGAACTTCTTCCTCAATATTTGAAATGTACTTAGGAGTTACTGGATGAGTGAACTCAAAAGTAATTTCTTTGTCAAACTTCTTTGAGACTATACCCTTATCAGTAACATGAAACGGATATAATTGGGTTAGGAATGGAGTTCCTAGGATGATTCCTTCATTAAGGTTCTTCACCAAAATGAATGTGTTGACTAGACACACATCACCTTTGCAGATGTGTACCTTTGACAATTTGAATTGGATGTTGAGGGGATTCCCGTTAGCTCCGGATAGGGACTCCTTTGTCTTTTCGAAATACCTAGAAGGGACAAGTCCTTCTTGTATAACGTTTTGATCAGCTCCTGAATCAATGAGAGCTAGAGCTTCAAGCTGGAAGTCTTTGACTTTAAAGACTATCTTTGACATCCATTTTTGATTTTGGATTTTGCTAATATTATTGATTGTGCCTATTTCTTCAATCAATAGTGCTTTTCCCGCGCTTTTTCTTTCAAAATCGCTTGTCGATTCTTCTTTCGAAGCTTGAGATCCTTGAAAGGCTTGAAATGCAGTTTCAAGGTAGATGAGTCGTTGTTTGTTTTCAGCAACTTCTCTTTTGAGGGTCTTTACCTCATGATGAAGATCTTCAACTTGAATGGGCATTTTTGCTTCGCCCTTGACTCGATTTAGTATGTCTTGATATGAATACATAATCGGATTTTGAATTGCCTTTTGAGGCGCTTGCTCTTCTAAACTTTGCTTCAATTTGAGGAGGCAGGTTCTTTTCGCTTCTTCATCAGGGATCTGCTCGATGAGGTCAAAAAGAGTTTCCTGATCCTTGGTGATGACATTAATGTGGCCAGAACACTTACCAGCACATCGTCCTGTGC

mRNA sequence

TGATACCATTTAGGGTCGGATGCCAACTGCTATTTATAGTGAAAGATAATAATTAATAATGCCTGCACAGGCATTATTAACCTTCACTATTGTCTTCACAGTGGTCCAACAATAATTGATAATACAGTAGATTTTTAGAATGGCCGACAGGACAGGACCCCTGTCTTGGCTTTTTCTAAGAATCTTTTCTTTTTGAAAATTAAAACTAGTGGGACAGGACCCCCACTATGATAGAAAGCATTTAAAGAAAGCAGAAGCGATAAATGCGATATGTCTGCTGTTTGTCCTTCTCTTCAAAATGAAACTTATTAGGGAAGATAATGACGTCACCCGATTGTCTTCTGCCTGGCATGGAATATAATTCTTGATAGATTAATTTCTCTCTTTGTAGCGCACATGCTCCCAGTTTGGTCTTACTACGGCTTCCCGCCTGGCCGCCAATGGAGCGCCCGTAGGCCCTGCTACAAAAATTAAAATTAATTTCTCAAGAATTCTCCTGGAAATAATCCCATCCAGAGTTATTCCTCTACGCCGCCTGCGTTGCCTGAGGTTGGTGAATCCTCTGCAGAAGTGTATCATCTTCGTCATGGAGTCTTCTCTTTCAAATGTTCTTTTTAAAGAAAGTTGAAATCAGCAGACTGTTAAAGCAAGGATAAGGTCGGAATACAATGACCTTATCTAAACAAATTTTACAAAACTTAAACAAATTAATTTACATAAATTTACAAAATTATACATAAACACTTGAAATTGAAATACACTTGAAATGTCACATATTTAGACTAATATGGTTGAGTATCCAAAAATGGATCGTTGATGTCGAGGCCTTCGTACGGGTCATAATCAAAGTCATCGACATTATTGACGGAGGCTGGAGAAACGTCCTCTGGTAAATCGTCGTTATCATCTGAGAGGTTTACAACGACGTTGTTGACAACAGAATTGAATTCCTGTTGAGTGCTTGCTCCGGCAAGGGTTGACATGACTGCGTTTTTGGTGAGGAGGAAGGCTTCGTCCTCTTGCCTAGTCATATCTTGGAGATGGACATTGGCTTTAAACCAATCTTTGATCTTGTTGACTTCGAGATGGGAGTAATTGAATTTTTCCCACCATTTGATCCTGAGGGATTTACTCAGGGCTTTGAAGTTTCCCGAAGGTCCTAGCTGGAAATTCCAGCAAAAGATCCAGGGAATTTGGAAATACAAAGCAAACCTAAACGTCTTCGAAAGTGGTGACGAATAGATACTTTGTTGGAAAAGGTGGTACGAACGTTGGACTTCTACCGGAAATATTTCCTCGGAGAGTCCAAAATACATCCACCAGTTTTGAAACCAGTTTGGGAAGTGCATTTTGTAAGCTTGCTTGCAAAATGTCACAAACCAAGAATGGTTGTAAGCTTGGAGCCAGAATACAATGTACCATGCCTTTGTATAGTCACGGTAATTGTATGAGGGTGGTTTGAAAGGGTGAGAGAATTTTCTTCCCACAAACATCCCCTGTTTCCAGTAAGACGGAGTGAGAACACGAAAAATTCTCAACTTTGAATAAATGATCTTGGAGGGATCATTTTTATCTGGGACATGAGTAATTTCAGCTGATTTGGAGTCAACTAAAATGTACTCGTAGAAAGTCCTGGTTTTTGAAAGATCTTCGGGCAAGAAATTGAACCCATGAGGAAATATTTGACTACAGACTTCTTGGACAGAAGGTCCATCGAATTCTGGTTCTATAGTTAAATCAACCATTGTAGTTTTGGTGAAATAACCATTAATTGGAGGTCTTGGCTGGAAAATCTTGGGCCTGACGATTTGAGAATACGAGGAGGGATTCCTCGGTATTGCAGACCTTGAGGAAGAAGCGGCCGGGGAAGCGGCACGCTTATTTGGAGTTGTTGGTCCAGAGGGACGCAACAATGCGGTTGAAGGAATAGGGGGAAGACTCGAAGAGTCTGATTGAATAGTTAATGTTCTTTGAGCAGAACCTTGACGTCGCCTGGATACTTGTTCAAATTGCAAATCCATGGCGTAGTTTTCTGCACTCATAGGTGTTGGTGCAGATGATTGAGCTGGGGATTTTTTCCTAGAAAGAGTAGTTTCTGAGGAGGAAGCTACTGATTGAGGTAGTCTCTGTGGACTATCGTTTTGACCGTTTTGCGGTGGCTGCCGCTGGTTCGGTGGCCGTTGCCGGCCCGGAGGTGGTTCCATTTGGCTGAGGATTCAATGCTGAGGAGGTGGTTTTCAAGAGATGTTCTCTTGAGAGGTAATCAGCAAGTGAATTCTCACTCCCTTTTATAGGCTCAATTTTGAAATCAAAGCAAGATAAGATTGCTTGCCATCTTGCAAAGATTTGCTTGGAGATAAGATTCTTGACATCTTTTTCAAAGATGAATTTGCTTGCCTTTGAATCAGTACGAACAAGAAATTCCTTGTTGATAAGATCTCCTTGAAATTTCTGGACGGAAAGTACTATTGCCAGGACTTCCTTTTTGACGGTGGAATAGTTCTTTTGTGCACTATTCCATATTCCTGAATGATAGCGAACAACAGAGATTTTTCCGTTAAGTTCCTGTTTGAGGATGCCTCCGTAACCGATATCGGATGCATCTGTATCAATAATGAGTTTGGCCTGTTCATCCACCAAGGATAAGCATGGGATGCTTTTGGCCAAAGATTTGATTGATTGGACTGCTCGGGTGTGCTCGTCCGTCCACGGCTTTGGATTCTTTTTTAGTCTGTCGTATAATGGCAGACAAATTGAGCGGAGATTGCGGATGAAATCACCAATGTAATTTACGCAACCAAGAAATCGCTGTAGCTGCGTTTTGTCTTGTATCTCATCTGGAAATTTGTCCACAAACTCCAGAGACCGTTGGATTGGTTTGATGATTCCTTGATTAATTTCATAACCTAAGAATCTGATCTTCGTTTGAAATAACTTAATCTTTGGTTGGGATACCACAAGACCGTTGGATTTGATTACATTGAGAAAGATGCGTAGATGCTTGAAATGCTGATCTACCGTGTTGGAAAATACCAAGACATCATCAATATAGACTATTGTGAACTCTTGATATTGGTTGAAGATATCGTTCATTATCTTCTGGAATTCGGATGGAGCGTTCTTCAATCCGAATGGCATGACATTCCATTGGAACTGTCCGAATGGAACATTGAAGGCCGTCTTGTATCGGTCAGATGGGTGAATCTGGATTTGCCAAAATCCGGATTTCATGTCGAACTTTGAGAAGACCTTTGCTAAAGTAATTCTTTTTAGCAAGTCTTGGCGATTAGGAATTGGGTACCTAATCCATTTGAGAACCTTATTGAGAGGCTTGTAATTGATGACAAGCCTTGGGACGCCACGTTCCTTTTCGGCCTGGTTGTTGACGTAAAAGGCCGAACATGACCATGGGCTTTTTGATGGGCTTATTAGGCCTTTATTGAGAAGCTCTGTGATTTCGTCCTTGCAGACTTTGACCAGATCTTTATTCATTTGAATAGGCCTGGCCTTTGTAGGGATTTGGGCCTCTTTAAATCCATCCTCATATGGCAACGTTACCATATGCTTCTTTCGATCCCAAAAGGCATTTGGGAGAGTTGAACAAACCTCCTTTTCGAGCTGCCTCTGAAAGTTTTGGATCTTCGATTGGACGAGTGGCTTCTGGATTTCAATAGCCACCTTACCTGCTTTGATGTCGTCTTGAAGGAATTCGATATGTTTTTCCTTCATGGCGATCCTGTTGATGAATTGACGAACTTCTTCCTCAATATTTGAAATGTACTTAGGAGTTACTGGATGAGTGAACTCAAAAGTAATTTCTTTGTCAAACTTCTTTGAGACTATACCCTTATCAGTAACATGAAACGGATATAATTGGGTTAGGAATGGAGTTCCTAGGATGATTCCTTCATTAAGGTTCTTCACCAAAATGAATGTGTTGACTAGACACACATCACCTTTGCAGATGTGTACCTTTGACAATTTGAATTGGATGTTGAGGGGATTCCCGTTAGCTCCGGATAGGGACTCCTTTGTCTTTTCGAAATACCTAGAAGGGACAAGTCCTTCTTGTATAACGTTTTGATCAGCTCCTGAATCAATGAGAGCTAGAGCTTCAAGCTGGAAGTCTTTGACTTTAAAGACTATCTTTGACATCCATTTTTGATTTTGGATTTTGCTAATATTATTGATTGTGCCTATTTCTTCAATCAATAGTGCTTTTCCCGCGCTTTTTCTTTCAAAATCGCTTGTCGATTCTTCTTTCGAAGCTTGAGATCCTTGAAAGGCTTGAAATGCAGTTTCAAGGTAGATGAGTCGTTGTTTGTTTTCAGCAACTTCTCTTTTGAGGGTCTTTACCTCATGATGAAGATCTTCAACTTGAATGGGCATTTTTGCTTCGCCCTTGACTCGATTTAGTATGTCTTGATATGAATACATAATCGGATTTTGAATTGCCTTTTGAGGCGCTTGCTCTTCTAAACTTTGCTTCAATTTGAGGAGGCAGGTTCTTTTCGCTTCTTCATCAGGGATCTGCTCGATGAGGTCAAAAAGAGTTTCCTGATCCTTGGTGATGACATTAATGTGGCCAGAACACTTACCAGCACATCGTCCTGTGC

Coding sequence (CDS)

ATGCTTGAAATGCTGATCTACCGTGTTGGAAAATACCAAGACATCATCAATATAGACTATTGTGAACTCTTGATATTGGTTGAAGATATCGTTCATTATCTTCTGGAATTCGGATGGAGCGTTCTTCAATCCGAATGGCATGACATTCCATTGGAACTGTCCGAATGGAACATTGAAGGCCGTCTTGTATCGGTCAGATGGGTGAATCTGGATTTGCCAAAATCCGGATTTCATGTCGAACTTTGA

Protein sequence

MLEMLIYRVGKYQDIINIDYCELLILVEDIVHYLLEFGWSVLQSEWHDIPLELSEWNIEGRLVSVRWVNLDLPKSGFHVEL
Homology
[Close]
BLAST of Cmc12g0318371 vs. NCBI nr
Match: KAA0041030.1 (hypothetical protein E6C27_scaffold19972G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 170.2 bits (430), Expect = 7.1e-39
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1  MLEMLIYRVGKYQDIINIDYCELLILVEDIVHYLLEFGWSVLQSEWHDIPLELSEWNIEG 60
          MLEMLIYRVGKYQDIINIDYCELLILVEDIVHYLLEFGWSVLQSEWHDIPL+LSEWNIEG
Sbjct: 1  MLEMLIYRVGKYQDIINIDYCELLILVEDIVHYLLEFGWSVLQSEWHDIPLKLSEWNIEG 60

Query: 61 RLVSVRWVNLDLPKSGFHVEL 82
          RLVSVRWVNLDLPKSGFHVEL
Sbjct: 61 RLVSVRWVNLDLPKSGFHVEL 81

[Close]
BLAST of Cmc12g0318371 vs. ExPASy TrEMBL
Match: A0A5A7TCM8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19972G00010 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.4e-39
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1  MLEMLIYRVGKYQDIINIDYCELLILVEDIVHYLLEFGWSVLQSEWHDIPLELSEWNIEG 60
          MLEMLIYRVGKYQDIINIDYCELLILVEDIVHYLLEFGWSVLQSEWHDIPL+LSEWNIEG
Sbjct: 1  MLEMLIYRVGKYQDIINIDYCELLILVEDIVHYLLEFGWSVLQSEWHDIPLKLSEWNIEG 60

Query: 61 RLVSVRWVNLDLPKSGFHVEL 82
          RLVSVRWVNLDLPKSGFHVEL
Sbjct: 61 RLVSVRWVNLDLPKSGFHVEL 81

The following BLAST results are available for this feature:
BLAST of Cmc12g0318371 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0041030.17.1e-3998.77hypothetical protein E6C27_scaffold19972G00010 [Cucumis melo var. makuwa][more]
BLAST of Cmc12g0318371 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc12g0318371 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TCM83.4e-3998.77Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of Cmc12g0318371 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0318371.1Cmc12g0318371.1mRNA