Cmc12g0316161 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTGTTTTTTGAACACCCCTAGAAAGTACTACTCTTTAAACCTAAAATCAAGAAGTAAGAATGTTGTAAAATACTTTGCTATTACATCGTCATAGGGATTTAGCAGCGGGGTTTTGCCTTCTCCTATCAACTACTGATCAGATTCATCAAACCCATAAAAACCCAGAGCTTCGTTTTTGAAAATTTGCTTTGGCATTTCATTTTGAAGTGAGTTTCTAGAAATTTTCTTTTCGGTTTGTTCTATATCAATCGTTCCTATTCGGTGTGTAATCGTTCCTTTTTGGGATTGAGATTTTTTTTTTGATTCATAGTTTCAATGGCTTCTCCGAACAATATGCCATCGGCTGTCGACAAGGAACAGGTTAGTTTTGATTTATTTATTCAGTTTTTTACTCTGTTTTTTAAAATTTATAGCCGTGATGTGGGATTCTAGTACTTGGATCGAGTGTTTTGAGAGTATCCCAGGTCAATAGTGGAATCTATGTGTTTTATTGTGGTGGGTTTTATCGAATTGAACTAATGTAATTGTTAGGGCACGAAGGAGAGAGATGAAGGATGGTTGTAGGATAATTTTTTTCATTAATTGAATGAAAGACACTCATTAGGCAGATGGTTTTCATGCTTAAGTTTATGATCTTTTATGCTTTGATATGTTTTGTTACTGAACTCTGTCCATTTGGTGATGAATATGTTCAATTTATTAGCCTTTGATGATTCTTTATCGTGATGATATAACTTAAATTTAGATTATAAATTCATAATTTTCAACTTGAATTTTTTTCGATTTTTTTTTTGTTTTTTTTTTTTGCATTGGAGCAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGTAGGTTTTATACATTTTCTTTTAATTATTTCACCTTTTTAATAAAAATATTTGGAAATGAAAGAAACATAGAAGTTTTTTCATTGAAAAAACATGAAAAAACATTCTAGATATCTGAGCTTCATGTTTTTTCTACCTTCTTCATAGACTTTGAACGTCATGCCTTTGTCTTTTTGTCTTTCAGGCTTACACAATCATGTTTCAACAAATGTGTTGATAAGAGGTAGGGCAGTTGTCTTACATATCTATCTTTGCATATTGTATGCTTTCTAATCATGGAATTCAATTTCCTATGTCTCATTCATTTTGAGATTTATGCATGGTCTTTTGTTAATTAACAGCTACCATCTTTTTTAGGTATAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGTATTGACCGCTGCGTCTCCAAGTACTGGCATGTAAGCTGATTTCTATCTTCTATGCTCTGTTGTTTAGTTTATGAGATATGTGATGATCCAATTATACACAAGACTTTATTCTCTATTGTGATTGAAAGTACAGAGACGAATTCATTTAGCTCTTCTTAATCACACTGTTCTTATTGAAATATCATGCTTAAATAAAATCTTTGTAGTCTATGAAATGAAATTTAAATGAATCCATGTGTTTTTGTTGTCTACTTCCGATTTACAAATCAACATTTGTTATGAATATAGTAATATCAATTATATTTGACTTAGGGGCATGACGCATTTGATAAATAAAACCAGGTGTCTCATGATAAAACAGAAACCATTGGTAAATTCCTCTTATTATTACCCTGGATTTTCTTTCAAAGTTCAACAAACATGTAGGTTGAGGGATTCAAACCACTAATCTCTAGGTCAAGAGTTATGTTTAAACCAGTCATGTTTTGGTGTCAACCTGAATTTCTCCTTCTCCAGCATTCCAAATTAAAATAGAAAAAAAGTTCCAAATTTCATTCAATGATGAAACTCTTGGATCGATCAGTTGGCTTTTAATAGCAGATATATTTGGGGTATCAACAGGATATTAGCAAGATCCTAATGGCAATTAGCTAAGGATGTATTTGGTTTAAATAGAGAGTTAGGAACTACCTTGCCGATCGACCAGTGTTGAACTTTGAGAGAGAGAGCTCTCTCGAAACACGATTGAGTATTGATGTAGTTTTCTTCTGACATTAAAATAAAGTTCTATTTTGTGTTTCGTGTTATTATGATTCAAAGACATGATTAAGGCGCATACATAGTCTACGGGACTATTTCTTGGCCACAGTTTCTCCTGTAACTTAAAAAAGCTTCAACATAATTTTAAACTCATTCCTCCCCAGTTTGAGAGAAAATCACTTTCTCAATCAGCTTGTTTACAATAAAACGTCTCGCCGGAACTCGCATAATCTGTTGTTGACTGATTGAATCCATCCTAAATATATATCTCATTAGTTATTTAATGGTATTGATTCTTAATTTGTTGTGCTTCAGGTAACCAATTTGATCGGCCAGCTACTCGGGTCTGGTAGACCTCCAATGTGAGCTGATTCATGATTTGTATAATTGTCAGTGAGTTGGGAATGAAGAACTTTTGGTTTAAGCATTTTTGGTCTGATTAGTTCTCCATTTCATGAAATAATTTAGTTTTTCTGTCCGAGAAAGCATTGATAATGACACATTCCTTGTCAATTTTATAGTTTTCATTTCACCATTAACTATGAATTTAAATTTCTAGAAAATATTCGATTGGGTCTCTATACCCTTTCTTTTATTAGTTCCTCAAGATCCTACTGGCTATGCTTTGCCTCTTGAATATCTTCCTTGCCAATTCTTTGATTTTAATGGCTGAAGAGGAATGTTAAATAAAGTATTGTAGACTTCTGTCTCAAATTTATTTTGCCAGTCCTTTTGTTAAAATTGTAGCAATATGGATTCTTTTATTCATATTAAACAAAAGTAATTTGTACAGATTTCACAAAGACAGTTTACATGGATTCATTAGTTACAAATTCACATGATAACTCGGAGTTTAGCCGGAAATCTCAACGGATTTCACATCTGTTTTCTTTCCTTCCGCCTTCGGGACCGTCACAGTAAGAACTCCGTTTTCCATTGATGCCCTAATTTCCTCCGTTTTCGCATCCTCCGGCATCCTAAATCTCCTCTGAAACTTTCCACTGCTTCGTTCTATCCGATGCCATTTCTCGTTCTTATCCTCTTTTTCTACATTTCGTTCGCCGCTAATCTGAATCACTTTTCCGTCTTCAATCTCCACTTTCACTTCCTCTTTCTTCAGTCCAGGCAGATCGGCTTTCAGAACATGAGCCTCCGGCGTCTCCTTCCAATCTACACGAGCGTTCACTATAGCTGAAGTTTCTCGAGCGATTTCGGGAAAGTGAGATGAAATTGAAGAAGGGAAGTGAAAATCGAATGGATCTGAGAGGTCGAACGTGGCAAATGGATCGAAGACACTGCTCTGTCGGCCATTGAAAAAGCTTGGAATCATCGACATCTTCGTAGGTTTAGTTTGAACAACTTAATCCGACTTGAATTGGAGAATTGAAATCGAAACTTAGAAGCGCTTTGATGGAATTCAACAATGATCTTGGTAGAATTAGTGGTTTGGAGTTTCTGATTGGTGAAGAAAGTGAAAGAGGCGAGAAATTATAGCAAGTGGGCGAAGATTCTGGTTTCTTCTAGAAGGTTTCTCTATTCTTTGAAATATCATCGCTTTTGTCATCGTATGAATATGAACCTTCTAGGCTTTCACCCAATCATTTTATAACGGGCTTGATTAATATGAAGTTTATAAAGATC GGTGTTTTTTGAACACCCCTAGAAAGTACTACTCTTTAAACCTAAAATCAAGAAGTAAGAATGTTGTAAAATACTTTGCTATTACATCGTCATAGGGATTTAGCAGCGGGGTTTTGCCTTCTCCTATCAACTACTGATCAGATTCATCAAACCCATAAAAACCCAGAGCTTCGTTTTTGAAAATTTGCTTTGGCATTTCATTTTGAATTTCAATGGCTTCTCCGAACAATATGCCATCGGCTGTCGACAAGGAACAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGCTTACACAATCATGTTTCAACAAATGTGTTGATAAGAGGTATAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGTATTGACCGCTGCGTCTCCAAGTACTGGCATGTAACCAATTTGATCGGCCAGCTACTCGGGTCTGGTAGACCTCCAATGTGAGCTGATTCATGATTTGTATAATTGTCAGTGAGTTGGGAATGAAGAACTTTTGGTTTAAGCATTTTTGGTCTGATTAGTTCTCCATTTCATGAAATAATTTAGTTTTTCTGTCCGAGAAAGCATTGATAATGACACATTCCTTGTCAATTTTATAGTTTTCATTTCACCATTAACTATGAATTTAAATTTCTAGAAAATATTCGATTGGGTCTCTATACCCTTTCTTTTATTAGTTCCTCAAGATCCTACTGGCTATGCTTTGCCTCTTGAATATCTTCCTTGCCAATTCTTTGATTTTAATGGCTGAAGAGGAATGTTAAATAAAGTATTGTAGACTTCTGTCTCAAATTTATTTTGCCAGTCCTTTTGTTAAAATTGTAGCAATATGGATTCTTTTATTCATATTAAACAAAAGTAATTTGTACAGATTTCACAAAGACAGTTTACATGGATTCATTAGTTACAAATTCACATGATAACTCGGAGTTTAGCCGGAAATCTCAACGGATTTCACATCTGTTTTCTTTCCTTCCGCCTTCGGGACCGTCACAGCAGATCGGCTTTCAGAACATGAGCCTCCGGCGTCTCCTTCCAATCTACACGAGCGTTCACTATAGCTGAAGTTTCTCGAGCGATTTCGGGAAAGTGAGATGAAATTGAAGAAGGGAAGTGAAAATCGAATGGATCTGAGAGGTCGAACGTGGCAAATGGATCGAAGACACTGCTCTGTCGGCCATTGAAAAAGCTTGGAATCATCGACATCTTCGTAGGTTTAGTTTGAACAACTTAATCCGACTTGAATTGGAGAATTGAAATCGAAACTTAGAAGCGCTTTGATGGAATTCAACAATGATCTTGGTAGAATTAGTGGTTTGGAGTTTCTGATTGGTGAAGAAAGTGAAAGAGGCGAGAAATTATAGCAAGTGGGCGAAGATTCTGGTTTCTTCTAGAAGGTTTCTCTATTCTTTGAAATATCATCGCTTTTGTCATCGTATGAATATGAACCTTCTAGGCTTTCACCCAATCATTTTATAACGGGCTTGATTAATATGAAGTTTATAAAGATC ATGGCTTCTCCGAACAATATGCCATCGGCTGTCGACAAGGAACAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGCTTACACAATCATGTTTCAACAAATGTGTTGATAAGAGGTATAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGTATTGACCGCTGCGTCTCCAAGTACTGGCATGTAACCAATTTGATCGGCCAGCTACTCGGGTCTGGTAGACCTCCAATGTGA MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM Homology
BLAST of Cmc12g0316161 vs. NCBI nr
Match: XP_004145269.1 (mitochondrial import inner membrane translocase subunit TIM10 [Cucumis sativus] >XP_008457418.1 PREDICTED: mitochondrial import inner membrane translocase subunit TIM10 [Cucumis melo] >KGN65773.1 hypothetical protein Csa_023233 [Cucumis sativus] >TYJ97353.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucumis melo var. makuwa]) HSP 1 Score: 182.2 bits (461), Expect = 1.9e-42 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Cmc12g0316161 vs. NCBI nr
Match: XP_038894964.1 (mitochondrial import inner membrane translocase subunit TIM10 [Benincasa hispida]) HSP 1 Score: 180.3 bits (456), Expect = 7.2e-42 Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 0
BLAST of Cmc12g0316161 vs. NCBI nr
Match: XP_022970585.1 (mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita maxima]) HSP 1 Score: 178.7 bits (452), Expect = 2.1e-41 Identity = 82/85 (96.47%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Cmc12g0316161 vs. NCBI nr
Match: XP_022964898.1 (mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita moschata] >KAG7019162.1 Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 175.6 bits (444), Expect = 1.8e-40 Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 0
BLAST of Cmc12g0316161 vs. NCBI nr
Match: KAG6583395.1 (Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 175.6 bits (444), Expect = 1.8e-40 Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 0
BLAST of Cmc12g0316161 vs. ExPASy Swiss-Prot
Match: Q9ZW33 (Mitochondrial import inner membrane translocase subunit TIM10 OS=Arabidopsis thaliana OX=3702 GN=TIM10 PE=1 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 4.1e-32 Identity = 63/85 (74.12%), Postives = 72/85 (84.71%), Query Frame = 0
BLAST of Cmc12g0316161 vs. ExPASy Swiss-Prot
Match: Q9W2D6 (Mitochondrial import inner membrane translocase subunit Tim10 OS=Drosophila melanogaster OX=7227 GN=Tim10 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 4.0e-11 Identity = 31/70 (44.29%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of Cmc12g0316161 vs. ExPASy Swiss-Prot
Match: P87108 (Mitochondrial import inner membrane translocase subunit TIM10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TIM10 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.2e-10 Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = 0
BLAST of Cmc12g0316161 vs. ExPASy Swiss-Prot
Match: Q9UTE9 (Mitochondrial import inner membrane translocase subunit tim10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tim10 PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.5e-10 Identity = 27/62 (43.55%), Postives = 40/62 (64.52%), Query Frame = 0
BLAST of Cmc12g0316161 vs. ExPASy Swiss-Prot
Match: Q759W7 (Mitochondrial import inner membrane translocase subunit TIM10 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=TIM10 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.0e-10 Identity = 25/66 (37.88%), Postives = 41/66 (62.12%), Query Frame = 0
BLAST of Cmc12g0316161 vs. ExPASy TrEMBL
Match: A0A5D3BDG9 (Mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001630 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 9.2e-43 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Cmc12g0316161 vs. ExPASy TrEMBL
Match: A0A0A0LVG1 (zf-Tim10_DDP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G527890 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 9.2e-43 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Cmc12g0316161 vs. ExPASy TrEMBL
Match: A0A1S3C655 (mitochondrial import inner membrane translocase subunit TIM10 OS=Cucumis melo OX=3656 GN=LOC103497109 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 9.2e-43 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Cmc12g0316161 vs. ExPASy TrEMBL
Match: A0A6J1I395 (mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucurbita maxima OX=3661 GN=LOC111469520 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.0e-41 Identity = 82/85 (96.47%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Cmc12g0316161 vs. ExPASy TrEMBL
Match: A0A6J1HM98 (mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucurbita moschata OX=3662 GN=LOC111464866 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 8.6e-41 Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 0
BLAST of Cmc12g0316161 vs. TAIR 10
Match: AT2G29530.1 (Tim10/DDP family zinc finger protein ) HSP 1 Score: 138.3 bits (347), Expect = 2.9e-33 Identity = 63/85 (74.12%), Postives = 72/85 (84.71%), Query Frame = 0
BLAST of Cmc12g0316161 vs. TAIR 10
Match: AT2G29530.2 (Tim10/DDP family zinc finger protein ) HSP 1 Score: 138.3 bits (347), Expect = 2.9e-33 Identity = 63/85 (74.12%), Postives = 72/85 (84.71%), Query Frame = 0
BLAST of Cmc12g0316161 vs. TAIR 10
Match: AT2G29530.3 (Tim10/DDP family zinc finger protein ) HSP 1 Score: 122.9 bits (307), Expect = 1.3e-28 Identity = 62/109 (56.88%), Postives = 71/109 (65.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
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