Homology
BLAST of Cmc12g0314871 vs. NCBI nr
Match:
KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 2027.3 bits (5251), Expect = 0.0e+00
Identity = 1003/1003 (100.00%), Postives = 1003/1003 (100.00%), Query Frame = 0
Query: 1 MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM
Sbjct: 233 MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 292
Query: 61 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 120
NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH
Sbjct: 293 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 352
Query: 121 LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 180
LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS
Sbjct: 353 LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 412
Query: 181 DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI
Sbjct: 413 DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 472
Query: 241 LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 300
LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP
Sbjct: 473 LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 532
Query: 301 SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 360
SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP
Sbjct: 533 SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 592
Query: 361 RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDEST 420
RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDEST
Sbjct: 593 RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDEST 652
Query: 421 RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 480
RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED
Sbjct: 653 RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 712
Query: 481 PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK 540
PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK
Sbjct: 713 PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK 772
Query: 541 VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG 600
VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG
Sbjct: 773 VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG 832
Query: 601 NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP 660
NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP
Sbjct: 833 NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP 892
Query: 661 CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIR 720
CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIR
Sbjct: 893 CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIR 952
Query: 721 DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPY 780
DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPY
Sbjct: 953 DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPY 1012
Query: 781 ASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAK 840
ASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAK
Sbjct: 1013 ASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAK 1072
Query: 841 DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 900
DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA
Sbjct: 1073 DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 1132
Query: 901 KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ 960
KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
Sbjct: 1133 KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ 1192
Query: 961 RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1004
RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1193 RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235
BLAST of Cmc12g0314871 vs. NCBI nr
Match:
KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 2000.7 bits (5182), Expect = 0.0e+00
Identity = 989/1003 (98.60%), Postives = 996/1003 (99.30%), Query Frame = 0
Query: 1 MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM
Sbjct: 233 MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 292
Query: 61 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 120
NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH
Sbjct: 293 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 352
Query: 121 LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 180
LRLGHINLDRIGRLVK+GLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS
Sbjct: 353 LRLGHINLDRIGRLVKDGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 412
Query: 181 DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKARG FEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI
Sbjct: 413 DLCGPMNVKARGSFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 472
Query: 241 LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 300
RSDRGGEYMDL FQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP
Sbjct: 473 FRSDRGGEYMDLIFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 532
Query: 301 SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 360
SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP
Sbjct: 533 SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 592
Query: 361 RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDEST 420
RSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDEST
Sbjct: 593 RSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDEST 652
Query: 421 RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 480
RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED
Sbjct: 653 RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 712
Query: 481 PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK 540
PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK
Sbjct: 713 PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK 772
Query: 541 VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG 600
VQTFKARLVAKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEIWQMDVKTAFLNG
Sbjct: 773 VQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKFYDYEIWQMDVKTAFLNG 832
Query: 601 NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP 660
NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP
Sbjct: 833 NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP 892
Query: 661 CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIR 720
CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE QYVLGIQIIR
Sbjct: 893 CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIR 952
Query: 721 DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPY 780
DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPY
Sbjct: 953 DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPY 1012
Query: 781 ASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAK 840
ASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAK
Sbjct: 1013 ASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAK 1072
Query: 841 DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 900
DLILTGYT+SDFQTDKDSRKSTS SVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA
Sbjct: 1073 DLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 1132
Query: 901 KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ 960
KEAVWL+KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
Sbjct: 1133 KEAVWLKKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ 1192
Query: 961 RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1004
RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1193 RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235
BLAST of Cmc12g0314871 vs. NCBI nr
Match:
KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 1785.4 bits (4623), Expect = 0.0e+00
Identity = 881/882 (99.89%), Postives = 882/882 (100.00%), Query Frame = 0
Query: 122 RLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 181
+LGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD
Sbjct: 228 KLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 287
Query: 182 LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL 241
LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL
Sbjct: 288 LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL 347
Query: 242 RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 301
RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS
Sbjct: 348 RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 407
Query: 302 SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 361
SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR
Sbjct: 408 SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 467
Query: 362 SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR 421
SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR
Sbjct: 468 SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR 527
Query: 422 VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 481
VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP
Sbjct: 528 VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 587
Query: 482 LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV 541
LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV
Sbjct: 588 LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV 647
Query: 542 QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 601
QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN
Sbjct: 648 QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 707
Query: 602 LEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPC 661
LEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPC
Sbjct: 708 LEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPC 767
Query: 662 VYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRD 721
VYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRD
Sbjct: 768 VYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRD 827
Query: 722 RKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYA 781
RKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYA
Sbjct: 828 RKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYA 887
Query: 782 SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKD 841
SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKD
Sbjct: 888 SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKD 947
Query: 842 LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAK 901
LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAK
Sbjct: 948 LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAK 1007
Query: 902 EAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQR 961
EAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQR
Sbjct: 1008 EAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQR 1067
Query: 962 GDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1004
GDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1068 GDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1109
BLAST of Cmc12g0314871 vs. NCBI nr
Match:
KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 1656.0 bits (4287), Expect = 0.0e+00
Identity = 810/1004 (80.68%), Postives = 897/1004 (89.34%), Query Frame = 0
Query: 1 MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
MT++VGTG V+SA AVG +L F+ LEN+Y+VP +KRNL+SV CL+E YS+ F++
Sbjct: 335 MTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNV 394
Query: 61 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 120
N+ FIYKNGV ICSAKLENNLYVLR +KA+LN EMF+TA TQNKR +ISP N +LWH
Sbjct: 395 NKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWH 454
Query: 121 LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 180
LRLGHINL+RI RLVKNGLL++L++ SLP CESCLEGKMTKRPFTGKG+RAKEPLEL+HS
Sbjct: 455 LRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHS 514
Query: 181 DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKARGGFEYFI+F DDYSRYGY+YLM+HKSEALEKFKEYK EVEN LSK IK
Sbjct: 515 DLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKT 574
Query: 241 LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 300
RSDRGGEYMDL+FQ+Y++E GI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA LP
Sbjct: 575 FRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLP 634
Query: 301 SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 360
+SFWGYAV+TAV+ILN VPSKSVSETP +LW GRK SL HFRIWGCPAHVL NPKKLEP
Sbjct: 635 NSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEP 694
Query: 361 RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLS----EAT 420
RS+LC FVGYPK TRGG F+DP++N+VFVSTNATFLEEDH+R HKPRSK+VL+ E T
Sbjct: 695 RSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETT 754
Query: 421 DESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDD 480
+ STRVV+E +RV +S ++H QSLR PRRSGRV + P RY+ LTET VI D
Sbjct: 755 EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDG 814
Query: 481 GVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRD 540
+EDPL++K+AM DVDKD+W+KAM+LE+ESMYFNSVW+LVD P+GVKPIGCKWIYKRKR
Sbjct: 815 DIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRG 874
Query: 541 SAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTA 600
+ GKVQTFKARLVAKGYTQ EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTA
Sbjct: 875 ADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTA 934
Query: 601 FLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQN 660
FLNGNLEE+I+M QPEGFI GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQ
Sbjct: 935 FLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQI 994
Query: 661 VDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGI 720
VDEPCVYK+I VAFLVLYVDDILLIGND+G LTD+K WLA QFQMKDLGEAQ+VLGI
Sbjct: 995 VDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGI 1054
Query: 721 QIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMR 780
QI RDRKNK LALSQA+YIDK++V+YSMQNSK+GLLPFRHGV LSKEQ PKTPQ+VE+MR
Sbjct: 1055 QIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMR 1114
Query: 781 RIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLV 840
IPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL HWTAVK +LKYLRRTRDY LV
Sbjct: 1115 HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLV 1174
Query: 841 YGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA 900
YG+KDLILTGYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA
Sbjct: 1175 YGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA 1234
Query: 901 CEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIR 960
CEAAKEAVWLR FL DLEVVPNM+ PITLYCDNSGAVANS+EPRSHKRGKHIERKYHLIR
Sbjct: 1235 CEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIR 1294
Query: 961 EIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDM 1001
EIV RGDVIVT+IAS HN+ADPFTK LTAKVFEGHLESLGLRDM
Sbjct: 1295 EIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDM 1338
BLAST of Cmc12g0314871 vs. NCBI nr
Match:
KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 1656.0 bits (4287), Expect = 0.0e+00
Identity = 810/1004 (80.68%), Postives = 897/1004 (89.34%), Query Frame = 0
Query: 1 MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
MT++VGTG V+SA AVG +L F+ LEN+Y+VP +KRNL+SV CL+E YS+ F++
Sbjct: 336 MTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNV 395
Query: 61 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 120
N+ FIYKNGV ICSAKLENNLYVLR +KA+LN EMF+TA TQNKR +ISP N +LWH
Sbjct: 396 NKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWH 455
Query: 121 LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 180
LRLGHINL+RI RLVKNGLL++L++ SLP CESCLEGKMTKRPFTGKG+RAKEPLEL+HS
Sbjct: 456 LRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHS 515
Query: 181 DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKARGGFEYFI+F DDYSRYGY+YLM+HKSEALEKFKEYK EVEN LSK IK
Sbjct: 516 DLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKT 575
Query: 241 LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 300
RSDRGGEYMDL+FQ+Y++E GI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA LP
Sbjct: 576 FRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLP 635
Query: 301 SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 360
+SFWGYAV+TAV+ILN VPSKSVSETP +LW GRK SL HFRIWGCPAHVL NPKKLEP
Sbjct: 636 NSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEP 695
Query: 361 RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLS----EAT 420
RS+LC FVGYPK TRGG F+DP++N+VFVSTNATFLEEDH+R HKPRSK+VL+ E T
Sbjct: 696 RSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETT 755
Query: 421 DESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDD 480
+ STRVV+E +RV +S ++H QSLR PRRSGRV + P RY+ LTET VI D
Sbjct: 756 EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDG 815
Query: 481 GVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRD 540
+EDPL++K+AM DVDKD+W+KAM+LE+ESMYFNSVW+LVD P+GVKPIGCKWIYKRKR
Sbjct: 816 DIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRG 875
Query: 541 SAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTA 600
+ GKVQTFKARLVAKGYTQ EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTA
Sbjct: 876 ADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTA 935
Query: 601 FLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQN 660
FLNGNLEE+I+M QPEGFI GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQ
Sbjct: 936 FLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQI 995
Query: 661 VDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGI 720
VDEPCVYK+I VAFLVLYVDDILLIGND+G LTD+K WLA QFQMKDLGEAQ+VLGI
Sbjct: 996 VDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGI 1055
Query: 721 QIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMR 780
QI RDRKNK LALSQA+YIDK++V+YSMQNSK+GLLPFRHGV LSKEQ PKTPQ+VE+MR
Sbjct: 1056 QIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMR 1115
Query: 781 RIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLV 840
IPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL HWTAVK +LKYLRRTRDY LV
Sbjct: 1116 HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLV 1175
Query: 841 YGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA 900
YG+KDLILTGYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA
Sbjct: 1176 YGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA 1235
Query: 901 CEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIR 960
CEAAKEAVWLR FL DLEVVPNM+ PITLYCDNSGAVANS+EPRSHKRGKHIERKYHLIR
Sbjct: 1236 CEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIR 1295
Query: 961 EIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDM 1001
EIV RGDVIVT+IAS HN+ADPFTK LTAKVFEGHLESLGLRDM
Sbjct: 1296 EIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDM 1339
BLAST of Cmc12g0314871 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 719.2 bits (1855), Expect = 6.7e-206
Identity = 400/1027 (38.95%), Postives = 604/1027 (58.81%), Query Frame = 0
Query: 2 TLKVGTGDVISARAVGDAKLFFG-NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 61
T+K+G +GD + + L+++ VP ++ NL+S L Y F+
Sbjct: 321 TVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFAN 380
Query: 62 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 121
+ + K + I LY + LN + IS + LWH
Sbjct: 381 QKWRLTKGSLVIAKGVARGTLYRTNAEICQGELN----------AAQDEISVD----LWH 440
Query: 122 LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 181
R+GH++ + L K L++ K ++ PC+ CL GK + F R L+L++S
Sbjct: 441 KRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYS 500
Query: 182 DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 241
D+CGPM +++ GG +YF++FIDD SR ++Y+++ K + + F+++ VE +K+K
Sbjct: 501 DVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKR 560
Query: 242 LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 301
LRSD GGEY F++Y HGI+ + + PGTPQ NGV+ER NRT+++ VRSM+ A+LP
Sbjct: 561 LRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLP 620
Query: 302 SSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCP--AHVLVTNPKK 361
SFWG AV+TA +++N PS ++ E P +W ++ S SH +++GC AHV K
Sbjct: 621 KSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTK 680
Query: 362 LEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHM----RNHKPRSKLVLS 421
L+ +S C F+GY E G +DP + +V S + F E + + K ++ ++ +
Sbjct: 681 LDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPN 740
Query: 422 EATDESTRVVDEVGPSSRVDETTTSGQ-------------------SHPSQSLRMP---R 481
T ST + S DE + G+ HP+Q R
Sbjct: 741 FVTIPSTS-NNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLR 800
Query: 482 RSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNS 541
RS R + RY + V+I DD +P S K+ ++ +K+Q +KAM EMES+ N
Sbjct: 801 RSERPRVESRRY--PSTEYVLISDD--REPESLKEVLSHPEKNQLMKAMQEEMESLQKNG 860
Query: 542 VWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAML 601
++LV+LP+G +P+ CKW++K K+D K+ +KARLV KG+ Q++G+D++E FSPV +
Sbjct: 861 TYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKM 920
Query: 602 KSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIY 661
SIR +LS+A D E+ Q+DVKTAFL+G+LEE I+M QPEGF G++ VCKLN+S+Y
Sbjct: 921 TSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLY 980
Query: 662 GLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-KKINKGKVAFLVLYVDDILLIGNDVGY 721
GLKQA R W ++FD+ +KS + + +PCVY K+ ++ L+LYVDD+L++G D G
Sbjct: 981 GLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGL 1040
Query: 722 LTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKG 781
+ +K L+ F MKDLG AQ +LG++I+R+R ++ L LSQ YI+++L R++M+N+K
Sbjct: 1041 IAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPV 1100
Query: 782 LLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQS 841
P + LSK+ P T +E +M ++PY+SAVGSLMYAM+CTRPDI +AVG+VSR+
Sbjct: 1101 STPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLE 1160
Query: 842 NPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLN 901
NPG +HW AVK +L+YLR T L +G D IL GYTD+D D D+RKS++G +FT +
Sbjct: 1161 NPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFS 1220
Query: 902 GGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNS 961
GGA+ W+S Q C+A ST EAEY+AA E KE +WL++FL +L + +YCD+
Sbjct: 1221 GGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGL---HQKEYVVYCDSQ 1280
Query: 962 GAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEG 998
A+ SK H R KHI+ +YH IRE+V + V KI++ N AD TK + FE
Sbjct: 1281 SAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFEL 1325
BLAST of Cmc12g0314871 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 506.5 bits (1303), Expect = 6.8e-142
Identity = 336/1089 (30.85%), Postives = 541/1089 (49.68%), Query Frame = 0
Query: 30 LENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHIC-SAKLENNLYVLRPNE 89
LE++ + NL+SV L E SI F + I KNG+ + ++ + NN+
Sbjct: 345 LEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNNV------- 404
Query: 90 AKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHIN------LDRIGRLVKNGLLNK 149
V+N + + + N ++K NN LWH R GHI+ + R LLN
Sbjct: 405 --PVINFQAY-SINAKHK-------NNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNN 464
Query: 150 LKDVSLPPCESCLEGKMTKRPFTGKGYRA--KEPLELIHSDLCGPMNVKARGGFEYFISF 209
L ++S CE CL GK + PF + K PL ++HSD+CGP+ YF+ F
Sbjct: 465 L-ELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIF 524
Query: 210 IDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIE 269
+D ++ Y YL+++KS+ F+++ + E + K+ L D G EY+ + + ++
Sbjct: 525 VDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVK 584
Query: 270 HGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPS 329
GI L+ P TPQ NGVSER RT+ + R+M+S A+L SFWG AV TA +++N +PS
Sbjct: 585 KGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPS 644
Query: 330 KSV---SETPFELWRGRKPSLSHFRIWGCPAHVLVTNPK-KLEPRSRLCQFVGYPKETRG 389
+++ S+TP+E+W +KP L H R++G +V + N + K + +S FVGY E G
Sbjct: 645 RALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGY--EPNG 704
Query: 390 GLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDE---------STRVVDEVG 449
+D + V+ + E + + + + + V + + E S +++
Sbjct: 705 FKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEF 764
Query: 450 P--SSRVDETTTSGQSHPSQSLRMPRRSGRVV--------------------SQPNRYL- 509
P S D S S++ P S +++ + N+Y
Sbjct: 765 PNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFL 824
Query: 510 ------------------------GLTETQVVIPDDGVEDP------------------- 569
+ET + + G+++P
Sbjct: 825 NESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTK 884
Query: 570 --LSYKQ--------------AMNDV-----------DKDQWVKAMDLEMESMYFNSVWE 629
+SY + NDV DK W +A++ E+ + N+ W
Sbjct: 885 PQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWT 944
Query: 630 LVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSI 689
+ PE + +W++ K + G +KARLVA+G+TQ+ +DYEETF+PVA + S
Sbjct: 945 ITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSF 1004
Query: 690 RILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLK 749
R +LS+ Y+ ++ QMDVKTAFLNG L+E I+M P+G VCKLN++IYGLK
Sbjct: 1005 RFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLK 1064
Query: 750 QASRSWNIRFDTAIKSYGFDQNVDEPCVY--KKINKGKVAFLVLYVDDILLIGNDVGYLT 809
QA+R W F+ A+K F + + C+Y K N + +++LYVDD+++ D+ +
Sbjct: 1065 QAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMN 1124
Query: 810 DVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLL 869
+ K +L +F+M DL E ++ +GI+I + + + LSQ+ Y+ K+L +++M+N
Sbjct: 1125 NFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVST 1184
Query: 870 PFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNP 929
P ++ S ++ P S +G LMY MLCTRPD+ AV I+SRY S
Sbjct: 1185 PLPSKINYELLNS-------DEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKN 1244
Query: 930 GLDHWTAVKIVLKYLRRTRDYMLVYG---AKDLILTGYTDSDFQTDKDSRKSTSGSVFTL 989
+ W +K VL+YL+ T D L++ A + + GY DSD+ + RKST+G +F +
Sbjct: 1245 NSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKM 1304
Query: 990 -NGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCD 998
+ + W + +Q +A S+ EAEY+A EA +EA+WL+ L + + + PI +Y D
Sbjct: 1305 FDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI--KLENPIKIYED 1364
BLAST of Cmc12g0314871 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 458.8 bits (1179), Expect = 1.6e-127
Identity = 334/1130 (29.56%), Postives = 523/1130 (46.28%), Query Frame = 0
Query: 5 VGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIE-HMYSINFSMNEA 64
+ G I G A L ++ + L + VP I +NL+SV L + S+ F +
Sbjct: 341 IADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEF-FPAS 400
Query: 65 FIYKN---GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 124
F K+ GV + K ++ LY ++AV MF A+ +K S WH
Sbjct: 401 FQVKDLNTGVPLLQGKTKDELYEWPIASSQAV---SMF--ASPCSKATHSS-------WH 460
Query: 125 LRLGHINLDRIGRLVKNGLLNKLK-DVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIH 184
RLGH +L + ++ N L L L C C K K PF+ + +PLE I+
Sbjct: 461 SRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIY 520
Query: 185 SDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIK 244
SD+ + + + Y++ F+D ++RY +LY ++ KS+ + F +K+ VEN +I
Sbjct: 521 SDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIG 580
Query: 245 ILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQL 304
L SD GGE++ LR DY+ +HGI S P TP+ NG+SER++R +++M +++S+A +
Sbjct: 581 TLYSDNGGEFVVLR--DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 640
Query: 305 PSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHVLVT--NPK 364
P ++W YA AV+++N +P+ + ++PF+ G+ P+ +++GC + + N
Sbjct: 641 PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 700
Query: 365 KLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE------------------ 424
KLE +S+ C F+GY L R++ S + F E
Sbjct: 701 KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQR 760
Query: 425 ----DHMRNHK--PRSKLVL------------------SEATDESTRVVDEVGPSSRVDE 484
+ +H P + LVL S + +T+V PSS +
Sbjct: 761 SDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISS 820
Query: 485 TTTSGQSHPSQS--------------------LRMPRRSGRVVSQPNRYLGLTETQVVIP 544
++S + PS + L P + + PN+ L ++ + P
Sbjct: 821 PSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSP 880
Query: 545 ----------------------------------------------------DDGVEDP- 604
DG+ P
Sbjct: 881 HIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPN 940
Query: 605 --LSY----------KQAMNDVDKDQWVKAMDLEMESMYFNSVWELV-DLPEGVKPIGCK 664
SY + A+ + D+W +AM E+ + N W+LV P V +GC+
Sbjct: 941 QKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCR 1000
Query: 665 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 724
WI+ +K +S G + +KARLVAKGY QR G+DY ETFSPV SIRI+L +A + I
Sbjct: 1001 WIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPI 1060
Query: 725 WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 784
Q+DV AFL G L + ++MSQP GF+ + + VC+L ++IYGLKQA R+W + T +
Sbjct: 1061 RQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYL 1120
Query: 785 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 844
+ GF ++ + ++ + ++++YVDDIL+ GND L L+ +F +K+
Sbjct: 1121 LTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHE 1180
Query: 845 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKT 904
+ Y LGI+ R + L LSQ Y LL R +M +K P L+ K
Sbjct: 1181 DLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKL 1240
Query: 905 PQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLR 964
P E Y VGSL Y + TRPD+ YAV +S+Y P DHW A+K VL+YL
Sbjct: 1241 PDPTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLA 1300
Query: 965 RTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADS 998
T D+ + + L L Y+D+D+ D D ST+G + L + W S KQ + S
Sbjct: 1301 GTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRS 1360
BLAST of Cmc12g0314871 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 449.5 bits (1155), Expect = 9.9e-125
Identity = 325/1128 (28.81%), Postives = 497/1128 (44.06%), Query Frame = 0
Query: 5 VGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIE------HMYSINF 64
V G I G L ++ + L N+ VP I +NL+SV L + +F
Sbjct: 362 VADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASF 421
Query: 65 SMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYL 124
+ + GV + K ++ LY E + + A+ +K S
Sbjct: 422 QVKD---LNTGVPLLQGKTKDELY-----EWPIASSQPVSLFASPSSKATHSS------- 481
Query: 125 WHLRLGHINLDRIGRLVKNGLLNKLK-DVSLPPCESCLEGKMTKRPFTGKGYRAKEPLEL 184
WH RLGH + ++ N L+ L C CL K K PF+ + PLE
Sbjct: 482 WHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEY 541
Query: 185 IHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKK 244
I+SD+ + + + Y++ F+D ++RY +LY ++ KS+ E F +K +EN +
Sbjct: 542 IYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTR 601
Query: 245 IKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA 304
I SD GGE++ L +Y +HGI S P TP+ NG+SER++R +++ +++S+A
Sbjct: 602 IGTFYSDNGGEFVAL--WEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHA 661
Query: 305 QLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHVLVT--N 364
+P ++W YA AV+++N +P+ + E+PF+ G P+ R++GC + + N
Sbjct: 662 SIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYN 721
Query: 365 PKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE-----------DHMRN 424
KL+ +SR C F+GY L Q +R+++S + F E ++
Sbjct: 722 QHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQE 781
Query: 425 HKPRSKLVLSEATDESTR------------------------------------------ 484
+ S V S T TR
Sbjct: 782 QRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSS 841
Query: 485 ---------VVDEVGPSSRVDETTTSGQSHPS-----------------QSLRMPRRSGR 544
+ GP T T Q+H S QSL P +S
Sbjct: 842 SFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSS 901
Query: 545 VVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMND------------------------- 604
P + T P + P Q +N+
Sbjct: 902 SSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPK 961
Query: 605 -------------------VDKDQWVKAMDLEMESMYFNSVWELVDLPEG-VKPIGCKWI 664
+ ++W AM E+ + N W+LV P V +GC+WI
Sbjct: 962 YSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWI 1021
Query: 665 YKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQ 724
+ +K +S G + +KARLVAKGY QR G+DY ETFSPV SIRI+L +A + I Q
Sbjct: 1022 FTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQ 1081
Query: 725 MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 784
+DV AFL G L + ++MSQP GFI + + VCKL +++YGLKQA R+W + + +
Sbjct: 1082 LDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLT 1141
Query: 785 YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEA 844
GF +V + ++ + ++++YVDDIL+ GND L + L+ +F +KD E
Sbjct: 1142 IGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEEL 1201
Query: 845 QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQ 904
Y LGI+ R L LSQ YI LL R +M +K P LS K
Sbjct: 1202 HYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTD 1261
Query: 905 EVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRT 964
E Y VGSL Y + TRPDI YAV +S++ P +H A+K +L+YL T
Sbjct: 1262 PTE------YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGT 1321
Query: 965 RDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTM 998
++ + + L L Y+D+D+ DKD ST+G + L + W S KQ + S+
Sbjct: 1322 PNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSST 1381
BLAST of Cmc12g0314871 vs. ExPASy Swiss-Prot
Match:
P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)
HSP 1 Score: 156.0 bits (393), Expect = 2.3e-36
Identity = 106/314 (33.76%), Postives = 147/314 (46.82%), Query Frame = 0
Query: 591 MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 650
MDV TAFLN ++E I++ QP GF+ + V +L +YGLKQA WN + +K
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 651 YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEA 710
GF ++ E +Y + ++ +YVDD+L+ VK L + MKDLG+
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120
Query: 711 QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQ 770
LG+ I N + LS YI K + K P + L + SP
Sbjct: 121 DKFLGLN-IHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSP---- 180
Query: 771 EVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRT 830
++D+ PY S VG L++ RPDI Y V ++SR+ P H + + VL+YL T
Sbjct: 181 HLKDI--TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240
Query: 831 RDYMLVY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIK-QGCIADST 890
R L Y L LT Y D+ D ST G V L G V W S K +G I +
Sbjct: 241 RSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPS 300
Query: 891 MEAEYVAACEAAKE 903
EAEY+ A E E
Sbjct: 301 TEAEYITASETVME 307
BLAST of Cmc12g0314871 vs. ExPASy TrEMBL
Match:
A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)
HSP 1 Score: 2027.3 bits (5251), Expect = 0.0e+00
Identity = 1003/1003 (100.00%), Postives = 1003/1003 (100.00%), Query Frame = 0
Query: 1 MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM
Sbjct: 233 MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 292
Query: 61 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 120
NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH
Sbjct: 293 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 352
Query: 121 LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 180
LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS
Sbjct: 353 LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 412
Query: 181 DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI
Sbjct: 413 DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 472
Query: 241 LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 300
LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP
Sbjct: 473 LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 532
Query: 301 SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 360
SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP
Sbjct: 533 SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 592
Query: 361 RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDEST 420
RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDEST
Sbjct: 593 RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDEST 652
Query: 421 RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 480
RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED
Sbjct: 653 RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 712
Query: 481 PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK 540
PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK
Sbjct: 713 PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK 772
Query: 541 VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG 600
VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG
Sbjct: 773 VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG 832
Query: 601 NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP 660
NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP
Sbjct: 833 NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP 892
Query: 661 CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIR 720
CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIR
Sbjct: 893 CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIR 952
Query: 721 DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPY 780
DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPY
Sbjct: 953 DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPY 1012
Query: 781 ASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAK 840
ASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAK
Sbjct: 1013 ASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAK 1072
Query: 841 DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 900
DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA
Sbjct: 1073 DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 1132
Query: 901 KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ 960
KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
Sbjct: 1133 KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ 1192
Query: 961 RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1004
RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1193 RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235
BLAST of Cmc12g0314871 vs. ExPASy TrEMBL
Match:
A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)
HSP 1 Score: 2000.7 bits (5182), Expect = 0.0e+00
Identity = 989/1003 (98.60%), Postives = 996/1003 (99.30%), Query Frame = 0
Query: 1 MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM
Sbjct: 233 MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 292
Query: 61 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 120
NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH
Sbjct: 293 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 352
Query: 121 LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 180
LRLGHINLDRIGRLVK+GLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS
Sbjct: 353 LRLGHINLDRIGRLVKDGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 412
Query: 181 DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKARG FEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI
Sbjct: 413 DLCGPMNVKARGSFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 472
Query: 241 LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 300
RSDRGGEYMDL FQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP
Sbjct: 473 FRSDRGGEYMDLIFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 532
Query: 301 SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 360
SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP
Sbjct: 533 SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 592
Query: 361 RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDEST 420
RSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDEST
Sbjct: 593 RSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDEST 652
Query: 421 RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 480
RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED
Sbjct: 653 RVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 712
Query: 481 PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK 540
PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK
Sbjct: 713 PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK 772
Query: 541 VQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNG 600
VQTFKARLVAKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEIWQMDVKTAFLNG
Sbjct: 773 VQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKFYDYEIWQMDVKTAFLNG 832
Query: 601 NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP 660
NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP
Sbjct: 833 NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP 892
Query: 661 CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIR 720
CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE QYVLGIQIIR
Sbjct: 893 CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIR 952
Query: 721 DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPY 780
DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPY
Sbjct: 953 DRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPY 1012
Query: 781 ASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAK 840
ASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAK
Sbjct: 1013 ASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAK 1072
Query: 841 DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 900
DLILTGYT+SDFQTDKDSRKSTS SVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA
Sbjct: 1073 DLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 1132
Query: 901 KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ 960
KEAVWL+KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
Sbjct: 1133 KEAVWLKKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ 1192
Query: 961 RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1004
RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1193 RGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235
BLAST of Cmc12g0314871 vs. ExPASy TrEMBL
Match:
A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)
HSP 1 Score: 1785.4 bits (4623), Expect = 0.0e+00
Identity = 881/882 (99.89%), Postives = 882/882 (100.00%), Query Frame = 0
Query: 122 RLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 181
+LGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD
Sbjct: 228 KLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 287
Query: 182 LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL 241
LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL
Sbjct: 288 LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL 347
Query: 242 RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 301
RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS
Sbjct: 348 RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 407
Query: 302 SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 361
SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR
Sbjct: 408 SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 467
Query: 362 SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR 421
SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR
Sbjct: 468 SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR 527
Query: 422 VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 481
VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP
Sbjct: 528 VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 587
Query: 482 LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV 541
LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV
Sbjct: 588 LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV 647
Query: 542 QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 601
QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN
Sbjct: 648 QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 707
Query: 602 LEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPC 661
LEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPC
Sbjct: 708 LEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPC 767
Query: 662 VYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRD 721
VYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRD
Sbjct: 768 VYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRD 827
Query: 722 RKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYA 781
RKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYA
Sbjct: 828 RKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYA 887
Query: 782 SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKD 841
SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKD
Sbjct: 888 SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKD 947
Query: 842 LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAK 901
LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAK
Sbjct: 948 LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAK 1007
Query: 902 EAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQR 961
EAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQR
Sbjct: 1008 EAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQR 1067
Query: 962 GDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1004
GDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1068 GDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1109
BLAST of Cmc12g0314871 vs. ExPASy TrEMBL
Match:
A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)
HSP 1 Score: 1656.0 bits (4287), Expect = 0.0e+00
Identity = 810/1004 (80.68%), Postives = 897/1004 (89.34%), Query Frame = 0
Query: 1 MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
MT++VGTG V+SA AVG +L F+ LEN+Y+VP +KRNL+SV CL+E YS+ F++
Sbjct: 336 MTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNV 395
Query: 61 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 120
N+ FIYKNGV ICSAKLENNLYVLR +KA+LN EMF+TA TQNKR +ISP N +LWH
Sbjct: 396 NKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWH 455
Query: 121 LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 180
LRLGHINL+RI RLVKNGLL++L++ SLP CESCLEGKMTKRPFTGKG+RAKEPLEL+HS
Sbjct: 456 LRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHS 515
Query: 181 DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKARGGFEYFI+F DDYSRYGY+YLM+HKSEALEKFKEYK EVEN LSK IK
Sbjct: 516 DLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKT 575
Query: 241 LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 300
RSDRGGEYMDL+FQ+Y++E GI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA LP
Sbjct: 576 FRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLP 635
Query: 301 SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 360
+SFWGYAV+TAV+ILN VPSKSVSETP +LW GRK SL HFRIWGCPAHVL NPKKLEP
Sbjct: 636 NSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEP 695
Query: 361 RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLS----EAT 420
RS+LC FVGYPK TRGG F+DP++N+VFVSTNATFLEEDH+R HKPRSK+VL+ E T
Sbjct: 696 RSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETT 755
Query: 421 DESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDD 480
+ STRVV+E +RV +S ++H QSLR PRRSGRV + P RY+ LTET VI D
Sbjct: 756 EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDG 815
Query: 481 GVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRD 540
+EDPL++K+AM DVDKD+W+KAM+LE+ESMYFNSVW+LVD P+GVKPIGCKWIYKRKR
Sbjct: 816 DIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRG 875
Query: 541 SAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTA 600
+ GKVQTFKARLVAKGYTQ EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTA
Sbjct: 876 ADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTA 935
Query: 601 FLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQN 660
FLNGNLEE+I+M QPEGFI GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQ
Sbjct: 936 FLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQI 995
Query: 661 VDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGI 720
VDEPCVYK+I VAFLVLYVDDILLIGND+G LTD+K WLA QFQMKDLGEAQ+VLGI
Sbjct: 996 VDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGI 1055
Query: 721 QIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMR 780
QI RDRKNK LALSQA+YIDK++V+YSMQNSK+GLLPFRHGV LSKEQ PKTPQ+VE+MR
Sbjct: 1056 QIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMR 1115
Query: 781 RIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLV 840
IPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL HWTAVK +LKYLRRTRDY LV
Sbjct: 1116 HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLV 1175
Query: 841 YGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA 900
YG+KDLILTGYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA
Sbjct: 1176 YGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA 1235
Query: 901 CEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIR 960
CEAAKEAVWLR FL DLEVVPNM+ PITLYCDNSGAVANS+EPRSHKRGKHIERKYHLIR
Sbjct: 1236 CEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIR 1295
Query: 961 EIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDM 1001
EIV RGDVIVT+IAS HN+ADPFTK LTAKVFEGHLESLGLRDM
Sbjct: 1296 EIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDM 1339
BLAST of Cmc12g0314871 vs. ExPASy TrEMBL
Match:
A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)
HSP 1 Score: 1656.0 bits (4287), Expect = 0.0e+00
Identity = 810/1004 (80.68%), Postives = 897/1004 (89.34%), Query Frame = 0
Query: 1 MTLKVGTGDVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSM 60
MT++VGTG V+SA AVG +L F+ LEN+Y+VP +KRNL+SV CL+E YS+ F++
Sbjct: 336 MTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNV 395
Query: 61 NEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWH 120
N+ FIYKNGV ICSAKLENNLYVLR +KA+LN EMF+TA TQNKR +ISP N +LWH
Sbjct: 396 NKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWH 455
Query: 121 LRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHS 180
LRLGHINL+RI RLVKNGLL++L++ SLP CESCLEGKMTKRPFTGKG+RAKEPLEL+HS
Sbjct: 456 LRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHS 515
Query: 181 DLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 240
DLCGPMNVKARGGFEYFI+F DDYSRYGY+YLM+HKSEALEKFKEYK EVEN LSK IK
Sbjct: 516 DLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKT 575
Query: 241 LRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP 300
RSDRGGEYMDL+FQ+Y++E GI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA LP
Sbjct: 576 FRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLP 635
Query: 301 SSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEP 360
+SFWGYAV+TAV+ILN VPSKSVSETP +LW GRK SL HFRIWGCPAHVL NPKKLEP
Sbjct: 636 NSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEP 695
Query: 361 RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLS----EAT 420
RS+LC FVGYPK TRGG F+DP++N+VFVSTNATFLEEDH+R HKPRSK+VL+ E T
Sbjct: 696 RSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETT 755
Query: 421 DESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDD 480
+ STRVV+E +RV +S ++H QSLR PRRSGRV + P RY+ LTET VI D
Sbjct: 756 EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDG 815
Query: 481 GVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRD 540
+EDPL++K+AM DVDKD+W+KAM+LE+ESMYFNSVW+LVD P+GVKPIGCKWIYKRKR
Sbjct: 816 DIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRG 875
Query: 541 SAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTA 600
+ GKVQTFKARLVAKGYTQ EGVDYEETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTA
Sbjct: 876 ADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTA 935
Query: 601 FLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQN 660
FLNGNLEE+I+M QPEGFI GQEQK+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQ
Sbjct: 936 FLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQI 995
Query: 661 VDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGI 720
VDEPCVYK+I VAFLVLYVDDILLIGND+G LTD+K WLA QFQMKDLGEAQ+VLGI
Sbjct: 996 VDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGI 1055
Query: 721 QIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMR 780
QI RDRKNK LALSQA+YIDK++V+YSMQNSK+GLLPFRHGV LSKEQ PKTPQ+VE+MR
Sbjct: 1056 QIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMR 1115
Query: 781 RIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLV 840
IPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL HWTAVK +LKYLRRTRDY LV
Sbjct: 1116 HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLV 1175
Query: 841 YGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA 900
YG+KDLILTGYTDSDFQTD+DSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA
Sbjct: 1176 YGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAA 1235
Query: 901 CEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIR 960
CEAAKEAVWLR FL DLEVVPNM+ PITLYCDNSGAVANS+EPRSHKRGKHIERKYHLIR
Sbjct: 1236 CEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIR 1295
Query: 961 EIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDM 1001
EIV RGDVIVT+IAS HN+ADPFTK LTAKVFEGHLESLGLRDM
Sbjct: 1296 EIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDM 1339
BLAST of Cmc12g0314871 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 307.4 bits (786), Expect = 4.3e-83
Identity = 175/484 (36.16%), Postives = 275/484 (56.82%), Query Frame = 0
Query: 479 EDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSA 538
++P +Y +A + W AMD E+ +M WE+ LP KPIGCKW+YK K +S
Sbjct: 84 KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143
Query: 539 GKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFL 598
G ++ +KARLVAKGYTQ+EG+D+ ETFSPV L S++++L+I+ Y++ + Q+D+ AFL
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203
Query: 599 NGNLEESIFMSQPEGFIT-QGQE---QKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 658
NG+L+E I+M P G+ QG VC L +SIYGLKQASR W ++F + +GF
Sbjct: 204 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263
Query: 659 QNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVL 718
Q+ + + KI +++YVDDI++ N+ + ++K+ L + F+++DLG +Y L
Sbjct: 264 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323
Query: 719 GIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVED 778
G++I R + + Q Y LL + K +P V S + D
Sbjct: 324 GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG----GDFVD 383
Query: 779 MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYM 838
+ Y +G LMY + TR DI +AV +S++ P L H AV +L Y++ T
Sbjct: 384 AK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 443
Query: 839 LVYGAK-DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 898
L Y ++ ++ L ++D+ FQ+ KD+R+ST+G L + W+S KQ ++ S+ EAEY
Sbjct: 444 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 503
Query: 899 VAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYH 958
A A E +WL +F +L++ ++ P L+CDN+ A+ + H+R KHIE H
Sbjct: 504 RALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCH 553
BLAST of Cmc12g0314871 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 103.2 bits (256), Expect = 1.2e-21
Identity = 79/234 (33.76%), Postives = 115/234 (49.15%), Query Frame = 0
Query: 673 FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQA 732
+L+LYVDDILL G+ L + L++ F MKDLG Y LGIQI L LSQ
Sbjct: 2 YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQT 61
Query: 733 TYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAML 792
Y +++L M + K P + L+ S + D R S VG+L Y L
Sbjct: 62 KYAEQILNNAGMLDCKPMSTPL--PLKLNSSVSTAKYPDPSDFR-----SIVGALQYLTL 121
Query: 793 CTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDY-MLVYGAKDLILTGYTDSD 852
TRPDI YAV IV + P L + +K VL+Y++ T + + ++ L + + DSD
Sbjct: 122 -TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 181
Query: 853 FQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 906
+ +R+ST+G L + W + +Q ++ S+ E EY A A E W
Sbjct: 182 WAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of Cmc12g0314871 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 82.4 bits (202), Expect = 2.2e-15
Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 0
Query: 449 MPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMY 508
M RS +++ N LT T + ++P S A+ D W +AM E++++
Sbjct: 1 MLTRSKAGINKLNPKYSLTITTTI-----KKEPKSVIFALKD---PGWCQAMQEELDALS 60
Query: 509 FNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPV 568
N W LV P +GCKW++K K S G + KARLVAKG+ Q EG+ + ET+SPV
Sbjct: 61 RNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPV 120
Query: 569 AMLKSIRILLSIA 582
+IR +L++A
Sbjct: 121 VRTATIRTILNVA 125
BLAST of Cmc12g0314871 vs. TAIR 10
Match:
ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 63.9 bits (154), Expect = 8.3e-10
Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 0
Query: 283 NRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHF 342
NRT+++ VRSM+ LP +F A TAVHI+N PS +++ P E+W P+ S+
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 343 RIWGCPAHVLVTNPKKLEPRSR 364
R +GC A++ + KL+PR++
Sbjct: 62 RRFGCVAYI-HCDEGKLKPRAK 82
BLAST of Cmc12g0314871 vs. TAIR 10
Match:
ATMG00300.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 60.1 bits (144), Expect = 1.2e-08
Identity = 30/75 (40.00%), Postives = 42/75 (56.00%), Query Frame = 0
Query: 114 NNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKE 173
+ T LWH RL H++ + LVK G L+ K SL CE C+ GK + F+ + K
Sbjct: 67 DETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKN 126
Query: 174 PLELIHSDLCGPMNV 189
PL+ +HSDL G +V
Sbjct: 127 PLDYVHSDLWGAPSV 141
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0025945.1 | 0.0e+00 | 100.00 | gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi... | [more] |
| KAA0035907.1 | 0.0e+00 | 98.60 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
| KAA0059226.1 | 0.0e+00 | 99.89 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
| KAA0048404.1 | 0.0e+00 | 80.68 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
| KAA0035879.1 | 0.0e+00 | 80.68 | gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| P10978 | 6.7e-206 | 38.95 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
| P04146 | 6.8e-142 | 30.85 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
| Q9ZT94 | 1.6e-127 | 29.56 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
| Q94HW2 | 9.9e-125 | 28.81 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
| P25600 | 2.3e-36 | 33.76 | Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TZD0 | 0.0e+00 | 100.00 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000... | [more] |
| A0A5A7T2V9 | 0.0e+00 | 98.60 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760... | [more] |
| A0A5A7UYE8 | 0.0e+00 | 99.89 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015... | [more] |
| A0A5A7SMH8 | 0.0e+00 | 80.68 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025... | [more] |
| A0A5D3CPJ6 | 0.0e+00 | 80.68 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G23160.1 | 4.3e-83 | 36.16 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
| ATMG00810.1 | 1.2e-21 | 33.76 | DNA/RNA polymerases superfamily protein | [more] |
| ATMG00820.1 | 2.2e-15 | 36.09 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |
| ATMG00710.1 | 8.3e-10 | 39.02 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
| ATMG00300.1 | 1.2e-08 | 40.00 | Gag-Pol-related retrotransposon family protein | [more] |
