Cmc11g0314071 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0314071
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	50S ribosomal protein L3
Location	CMiso1.1chr11: 33109353 .. 33111808 (-)
RNA-Seq Expression	Cmc11g0314071
Synteny	Cmc11g0314071

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTATTTTTAACAATGGAGGGAAAATATAAGCGGATAAGAAAAACGGGACAGTCCTCTCAATCCCACCTCCACCTCCTTCTTCATCTTCCTTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCATCATCATCATCATCGTATGAATCATTGAAACCTTTGAAGAAGAAGAAATGTCTATCATTTCATTTTCATCAGCTTCGGCCTCAACCAAACATCCAATTTTCACTAACAATCCTTCTTCTTCTTCTTCTTCTTCATCTTCTTCATCTCTCACACTCAGGACTTCTTTCCTCGCCCTTCCTCTGAAATCCCACCACAAAAACAACCTTCGTTTCCATTTTCCAACACGGAGAACCACTAGACGTCCTAGCGATGGCCTCTCCGTTTGTATGAGCATGGAGGCTGGCATTGGCGTTATGGCCACTAAGCTCGGTATGATGAGCTTCTTTGAACCAGATGGCAAGGTCGTCCCTGTCACGGTGGTCGGTTTCAAGGAAGGCAACATCGTCACCCAGGTTAAGACGGAGGCGACTGACGGCTACAGTGCCGTTCAGGTTGGGTACCGTAGGGTTAGGGATCGAAAATTGACGAAACCGGAATTGGGGCATCTTGAGAAAGCTGGAGCAATTCCAATGCGTCATTTGCAGGAGTTTCGCCTTGAGTCTGTTGATGGATTTGAGCCCAATCAGCGCCTCGTTTTCAATGAACTTTTCAAGGAGGGGGACCTGGTTGATGTATCGGGCACTACAATTGGAAAGGGATTTCAAGGTTTTTGAGTTTTTTGCGATTCTGTTTGAAATCTGTTTTTATTTCATAGATACGGAATTGCCTCGGGTTTTCCTTGGAGCTTATGGTTCTTGTTCTGTGTCTGCATAATGTTGGAGTTGAATCTAGGCATGCACATGAAGGATTAAACATCAAATTTCATTGATATTTTTGCTGTTTGTTTTCCCAATGACATACAACCTGAAAGCCAGAAACAGTCTTGTTCTTTTTTTTTTTTTTTTTTTTCTGTGCCTGCACTATGTTAGAATTGAACTTAGGCTTCCTCAGGAAGGATTAAACATGAATTTTCATTGTTAACTTTGTTGTTTGAATGCACAATGGGATATGCTATTCAAAGCCTGAACCAGTCTTCCATGAAAGAAGCTGTTTAGATTTCCATTCCCCAAGTGCTGAATGTGAGGATATGATAGTTTTATGTGTGCAAATATTTGCTAATTTTGTGTGGGTATAAGGATGTGCCCGTGTATCTTGGTTGACAAGCTTTCATTCCAAAACTCATTCTTCGTCATCCCTTGTCATGCTAGACTCCATGAGATTGTGCTTACATCTGATGCTCTATTAGATCACCATTAGACATGAGAGCTTAAGTTGAAACTTTATGGTAGGTTTTTGTCATTAAATATGTTCTCAAACCCCTCATGTGCAAACTTATATAACGATTTGATTTACAAGACCCAACATCATTATAAACTTAGAAGAAAAAGAATACATAGAAAGTTTGTTTCACCAATACTCTTATTCCTTAAAAAATTACAGTATAACCTTTGATCTTTCTGAAGGTTTAAAAAGTACTCATACAGTAGAAATCCTTTAGAATTTTGGATAAAATTGTACATGGAACATTGTGGCAGTGACCTAATGGTGTGACAGATCCAAATTTCCATTGTCGTGGGTCTCAATTTTTATTCACGATTCATTTCTACTTCTAAGGTAGTTTTGAAAACTTTACAGAAAGTCAAAAGTAATATTGCAACTTTTGAAATAGCAAGAGTATTTTTTAAACAAATGGCGAAGTTTAGATATTCTTTATAACTTAACCTAGATTTTAACCATTTTATGTCTTCTCCATCTCCTTTCATCGCTGCTCTCTAACTGGTTTCTTGTATCATTCTCTCTATAATTCTTCTCTAGGTGGAATCAAGAGGCACAACTTCAAAAGAGGTCCAATGAGCCACGGTTCAAAGAGTCACAGGGCACTTGGATCGATTGGTGCAGGAACTACACCGGGGCGTGTTTACAAGGGAAAGAAGATGCCTGGAAGGATGGGAGGAACCAAGAGAAAGATCAGAAAACTCAAGATTGTAAAGATCGATGAAGACCTTAATGTTGTGATGATCAAAGGAGCCGTCCCAGGTAAACCAGGAAACCTTCTTCGTATAGCTCCTGCAAAGATAGTAGGAAAGAACATTCCTAAGAACTAGCTTTAGCTAATCTGTCGGAATTGTGTTTTTTCATTTTTTGTTTCTTGAGCTGTTGTATCTCTTCAACTGGTTATTTGTATTATGATAAGTTAACAGTTGAGTTCTCCAGAAAATGTTTGATCCATTCCAAGTTTTTACATCAGTTGGTGATTACAAGTAATTGGCTGCATCCATCTGTTGATATATTAAGAAGTTGTTCTTATTAAGGTTATTGTGTACTATATAGCAGAAAAATGTTGT

mRNA sequence

GTTTTATTTTTAACAATGGAGGGAAAATATAAGCGGATAAGAAAAACGGGACAGTCCTCTCAATCCCACCTCCACCTCCTTCTTCATCTTCCTTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCATCATCATCATCATCGTATGAATCATTGAAACCTTTGAAGAAGAAGAAATGTCTATCATTTCATTTTCATCAGCTTCGGCCTCAACCAAACATCCAATTTTCACTAACAATCCTTCTTCTTCTTCTTCTTCTTCATCTTCTTCATCTCTCACACTCAGGACTTCTTTCCTCGCCCTTCCTCTGAAATCCCACCACAAAAACAACCTTCGTTTCCATTTTCCAACACGGAGAACCACTAGACGTCCTAGCGATGGCCTCTCCGTTTGTATGAGCATGGAGGCTGGCATTGGCGTTATGGCCACTAAGCTCGGTATGATGAGCTTCTTTGAACCAGATGGCAAGGTCGTCCCTGTCACGGTGGTCGGTTTCAAGGAAGGCAACATCGTCACCCAGGTTAAGACGGAGGCGACTGACGGCTACAGTGCCGTTCAGGTTGGGTACCGTAGGGTTAGGGATCGAAAATTGACGAAACCGGAATTGGGGCATCTTGAGAAAGCTGGAGCAATTCCAATGCGTCATTTGCAGGAGTTTCGCCTTGAGTCTGTTGATGGATTTGAGCCCAATCAGCGCCTCGTTTTCAATGAACTTTTCAAGGAGGGGGACCTGGTTGATGTATCGGGCACTACAATTGGAAAGGGATTTCAAGGTGGAATCAAGAGGCACAACTTCAAAAGAGGTCCAATGAGCCACGGTTCAAAGAGTCACAGGGCACTTGGATCGATTGGTGCAGGAACTACACCGGGGCGTGTTTACAAGGGAAAGAAGATGCCTGGAAGGATGGGAGGAACCAAGAGAAAGATCAGAAAACTCAAGATTGTAAAGATCGATGAAGACCTTAATGTTGTGATGATCAAAGGAGCCGTCCCAGGTAAACCAGGAAACCTTCTTCGTATAGCTCCTGCAAAGATAGTAGGAAAGAACATTCCTAAGAACTAGCTTTAGCTAATCTGTCGGAATTGTGTTTTTTCATTTTTTGTTTCTTGAGCTGTTGTATCTCTTCAACTGGTTATTTGTATTATGATAAGTTAACAGTTGAGTTCTCCAGAAAATGTTTGATCCATTCCAAGTTTTTACATCAGTTGGTGATTACAAGTAATTGGCTGCATCCATCTGTTGATATATTAAGAAGTTGTTCTTATTAAGGTTATTGTGTACTATATAGCAGAAAAATGTTGT

Coding sequence (CDS)

ATGTCTATCATTTCATTTTCATCAGCTTCGGCCTCAACCAAACATCCAATTTTCACTAACAATCCTTCTTCTTCTTCTTCTTCTTCATCTTCTTCATCTCTCACACTCAGGACTTCTTTCCTCGCCCTTCCTCTGAAATCCCACCACAAAAACAACCTTCGTTTCCATTTTCCAACACGGAGAACCACTAGACGTCCTAGCGATGGCCTCTCCGTTTGTATGAGCATGGAGGCTGGCATTGGCGTTATGGCCACTAAGCTCGGTATGATGAGCTTCTTTGAACCAGATGGCAAGGTCGTCCCTGTCACGGTGGTCGGTTTCAAGGAAGGCAACATCGTCACCCAGGTTAAGACGGAGGCGACTGACGGCTACAGTGCCGTTCAGGTTGGGTACCGTAGGGTTAGGGATCGAAAATTGACGAAACCGGAATTGGGGCATCTTGAGAAAGCTGGAGCAATTCCAATGCGTCATTTGCAGGAGTTTCGCCTTGAGTCTGTTGATGGATTTGAGCCCAATCAGCGCCTCGTTTTCAATGAACTTTTCAAGGAGGGGGACCTGGTTGATGTATCGGGCACTACAATTGGAAAGGGATTTCAAGGTGGAATCAAGAGGCACAACTTCAAAAGAGGTCCAATGAGCCACGGTTCAAAGAGTCACAGGGCACTTGGATCGATTGGTGCAGGAACTACACCGGGGCGTGTTTACAAGGGAAAGAAGATGCCTGGAAGGATGGGAGGAACCAAGAGAAAGATCAGAAAACTCAAGATTGTAAAGATCGATGAAGACCTTAATGTTGTGATGATCAAAGGAGCCGTCCCAGGTAAACCAGGAAACCTTCTTCGTATAGCTCCTGCAAAGATAGTAGGAAAGAACATTCCTAAGAACTAG

Protein sequence

MSIISFSSASASTKHPIFTNNPSSSSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTRRTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

Homology

[Close]

BLAST of Cmc11g0314071 vs. NCBI nr
Match: XP_008460096.1 (PREDICTED: 50S ribosomal protein L3, chloroplastic [Cucumis melo])

HSP 1 Score: 562.4 bits (1448), Expect = 2.3e-156
Identity = 293/295 (99.32%), Postives = 293/295 (99.32%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTR 60
           MSIISFSSASASTKHPIFTNNP  SSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTR
Sbjct: 1   MSIISFSSASASTKHPIFTNNP--SSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTR 60

Query: 61  RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA 120
           RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA
Sbjct: 61  RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA 120

Query: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL 180
           TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL
Sbjct: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL 180

Query: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240
           FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM
Sbjct: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240

Query: 241 PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 296
           PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 293

[Close]

BLAST of Cmc11g0314071 vs. NCBI nr
Match: KAA0039986.1 (50S ribosomal protein L3 [Cucumis melo var. makuwa])

HSP 1 Score: 559.3 bits (1440), Expect = 2.0e-155
Identity = 292/295 (98.98%), Postives = 292/295 (98.98%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTR 60
           MSIISFSSASASTKHPIFTNNP  SSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHF TR
Sbjct: 1   MSIISFSSASASTKHPIFTNNP--SSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFATR 60

Query: 61  RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA 120
           RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA
Sbjct: 61  RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA 120

Query: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL 180
           TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL
Sbjct: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL 180

Query: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240
           FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM
Sbjct: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240

Query: 241 PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 296
           PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 293

[Close]

BLAST of Cmc11g0314071 vs. NCBI nr
Match: XP_004154027.1 (50S ribosomal protein L3, chloroplastic [Cucumis sativus] >KGN46258.1 hypothetical protein Csa_005128 [Cucumis sativus])

HSP 1 Score: 551.6 bits (1420), Expect = 4.1e-153
Identity = 288/295 (97.63%), Postives = 292/295 (98.98%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTR 60
           MSIISFSSASASTKHPIFTNNP SSSSSSSSSSLTLRTSFLALPLKSH+KNNLRFHFPTR
Sbjct: 1   MSIISFSSASASTKHPIFTNNP-SSSSSSSSSSLTLRTSFLALPLKSHNKNNLRFHFPTR 60

Query: 61  RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA 120
            TTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKT+A
Sbjct: 61  PTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTDA 120

Query: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL 180
           TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVD FEPNQRLVFNEL
Sbjct: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDAFEPNQRLVFNEL 180

Query: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240
           FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM
Sbjct: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240

Query: 241 PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 296
           PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVG+NIPK+
Sbjct: 241 PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGQNIPKS 294

[Close]

BLAST of Cmc11g0314071 vs. NCBI nr
Match: XP_038876222.1 (50S ribosomal protein L3, chloroplastic [Benincasa hispida])

HSP 1 Score: 528.1 bits (1359), Expect = 4.9e-146
Identity = 276/296 (93.24%), Postives = 283/296 (95.61%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSSS-SSSSSSLTLRTSFLALPLKSHHKNNLRFHFPT 60
           MSIISFSSAS S +HPIF NN SSSSS SS+SSSLTLRTSFLALP+  HHKNNLR  FPT
Sbjct: 1   MSIISFSSASTSARHPIFANNASSSSSFSSTSSSLTLRTSFLALPMNPHHKNNLRLQFPT 60

Query: 61  RRTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120
           RRTTRRP++ LSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE
Sbjct: 61  RRTTRRPNNALSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 120

Query: 121 ATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 180
           ATDGYSAVQVGYRRVRDRKLTKPELGHL+KAGAIPMRHLQEFRLESV GFE NQ LVFNE
Sbjct: 121 ATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVGGFESNQSLVFNE 180

Query: 181 LFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKK 240
           LFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKK
Sbjct: 181 LFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKK 240

Query: 241 MPGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 296
           MPGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 MPGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 296

[Close]

BLAST of Cmc11g0314071 vs. NCBI nr
Match: KAG6574805.1 (50S ribosomal protein L3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013387.1 50S ribosomal protein L3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 527.3 bits (1357), Expect = 8.3e-146
Identity = 272/295 (92.20%), Postives = 282/295 (95.59%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTR 60
           MS+IS SSAS S +HPIFTNN   +SSSS SSSL LRTSFLALPLKSH  NNLRF FP  
Sbjct: 1   MSVISISSASTSNRHPIFTNN---ASSSSPSSSLKLRTSFLALPLKSHRNNNLRFQFPRP 60

Query: 61  RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA 120
           RTTRRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQ+KTEA
Sbjct: 61  RTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTEA 120

Query: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL 180
           TDGYSAVQVGYRRVRDRKLTKPE+GHL+KAGAIPMRHLQEFRLES+DGFEPNQRLVFNEL
Sbjct: 121 TDGYSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDGFEPNQRLVFNEL 180

Query: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240
           FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKM
Sbjct: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKM 240

Query: 241 PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 296
           PGRMGGTKRKIRKLKIVKID+DLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 PGRMGGTKRKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of Cmc11g0314071 vs. ExPASy Swiss-Prot
Match: O80360 (50S ribosomal protein L3, chloroplastic (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPL3 PE=2 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.5e-110
Identity = 207/266 (77.82%), Postives = 232/266 (87.22%), Query Frame = 0


Query: 31  SSSLTLRTSFL-ALPLKSHHKNNLRFHFPTRRTTRRPSDGLSVCMSMEAGIGVMATKLGM 90
           ++ LTLR+ FL  LPL++     L+ H PT     +     S+  S+EAG+GVMATKLGM
Sbjct: 3   TTPLTLRSPFLHRLPLRA-----LKTHKPTSLHISKS----SISASLEAGVGVMATKLGM 62

Query: 91  MSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLEK 150
           MSFFE  G VVPVTVVGF+EGNIVTQ+KTEATDGY+AVQVGYRRVRDRKLTKPE+GHLEK
Sbjct: 63  MSFFEESGTVVPVTVVGFREGNIVTQIKTEATDGYNAVQVGYRRVRDRKLTKPEMGHLEK 122

Query: 151 AGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQGGIKRHNFKR 210
           +G IP+RHLQEFRL+S+DGFE  Q+L F ELFKEGDLVDVSGTTIGKGFQGGIKRHNFKR
Sbjct: 123 SGIIPLRHLQEFRLQSIDGFEVTQKLDFGELFKEGDLVDVSGTTIGKGFQGGIKRHNFKR 182

Query: 211 GPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDEDLNVVMIK 270
           G M+HGSKSHR LGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKID+ LN++MIK
Sbjct: 183 GQMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDDQLNIIMIK 242

Query: 271 GAVPGKPGNLLRIAPAKIVGKNIPKN 296
           GA+PGKPGNLLRIAPAKIVGKNIPK+
Sbjct: 243 GALPGKPGNLLRIAPAKIVGKNIPKS 259

[Close]

BLAST of Cmc11g0314071 vs. ExPASy Swiss-Prot
Match: Q9SKX4 (50S ribosomal protein L3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL3A PE=2 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.6e-107
Identity = 191/230 (83.04%), Postives = 211/230 (91.74%), Query Frame = 0


Query: 66  PSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYS 125
           P     V  SMEAGIGVM +KLGMMSFFE DG VVPVTVVGF+EGNIVTQ+KT ATDGY 
Sbjct: 42  PKTRFVVSSSMEAGIGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYD 101

Query: 126 AVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGD 185
           AVQ+GYRRVRD+KLTKPE GHL+KAG IPMRHLQEFRL +++GFEPNQ+LVF+E+FKEGD
Sbjct: 102 AVQIGYRRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGD 161

Query: 186 LVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMG 245
           LVDV+GTTIGKGFQGGIKRH+FKRG M+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMG
Sbjct: 162 LVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMG 221

Query: 246 GTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 296
           GT+ KIRKLKIVK+D++LNVVMIKGA+PGKPGNLLRI PAKIVG NIPKN
Sbjct: 222 GTRTKIRKLKIVKVDKELNVVMIKGALPGKPGNLLRITPAKIVGVNIPKN 271

[Close]

BLAST of Cmc11g0314071 vs. ExPASy Swiss-Prot
Match: P82191 (50S ribosomal protein L3, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL3 PE=1 SV=2)

HSP 1 Score: 389.0 bits (998), Expect = 4.6e-107
Identity = 213/296 (71.96%), Postives = 238/296 (80.41%), Query Frame = 0


Query: 2   SIISFSSASASTKHPIFTNNPSSSSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTRR 61
           S  ++SS+  S   P   +  SS + +    SL L TSF+  P   +    L+   P+R 
Sbjct: 13  SSCTYSSSKRSLSSPKAVSLSSSVNGTPKVQSLRLSTSFVCSP---NQIIKLKSVSPSRS 72

Query: 62  T-TRRPSDGLSV-CMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTE 121
           T  RR   GL +  MS++AGIGVM TKLGMMSFFE DG VVPVTV+GFKEGNIVTQVKTE
Sbjct: 73  TQLRRAVGGLEIKMMSVDAGIGVMGTKLGMMSFFEEDGTVVPVTVIGFKEGNIVTQVKTE 132

Query: 122 ATDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNE 181
           +TDGY+AVQVGY R+RDRKLT PE GHL KAG IPMRHLQEFRL SVD F P+Q+L+F E
Sbjct: 133 STDGYNAVQVGYERLRDRKLTMPERGHLNKAGVIPMRHLQEFRLVSVDDFTPSQKLLFEE 192

Query: 182 LFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKK 241
           LFKEGD+VD+SGTTIGKGFQGGIKRHNFKRG M+HGSKSHRALGSIGAGTTPG VYKGKK
Sbjct: 193 LFKEGDMVDISGTTIGKGFQGGIKRHNFKRGLMTHGSKSHRALGSIGAGTTPGHVYKGKK 252

Query: 242 MPGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 296
           MPGRMGGTK KIRKLKI+KID DL VVMIKGAVPGKPGNLLR+APAKIVGKNIPKN
Sbjct: 253 MPGRMGGTKTKIRKLKIMKIDTDLRVVMIKGAVPGKPGNLLRLAPAKIVGKNIPKN 305

[Close]

BLAST of Cmc11g0314071 vs. ExPASy Swiss-Prot
Match: B0C1D3 (50S ribosomal protein L3 OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=rplC PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.7e-64
Identity = 122/213 (57.28%), Postives = 162/213 (76.06%), Query Frame = 0


Query: 80  IGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNI-VTQVKTEATDGYSAVQVGYRRVRDRK 139
           +G++ TKLGM   F+  G+ +PVTVV  + G   VTQ+KT  TDGY+A+Q+GY    ++ 
Sbjct: 3   VGILGTKLGMTQVFDEAGRAIPVTVV--QAGPCPVTQIKTAQTDGYTAIQIGYGSTTEKA 62

Query: 140 LTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGF 199
           LT+PELGHL+K+G+ P+RHLQE+RL  V  +E  Q  +  +LF EG LVD+SGT+IG+GF
Sbjct: 63  LTRPELGHLKKSGSTPVRHLQEYRLADVSEYELGQS-ISADLFSEGQLVDISGTSIGRGF 122

Query: 200 QGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVK 259
            G  KRHNF+RGPM HGSK+HRA GS GAGTTPGR+Y GK+M G+MG  K+ IRKL +V+
Sbjct: 123 AGYQKRHNFRRGPMGHGSKNHRAPGSTGAGTTPGRIYPGKRMAGQMGNVKKTIRKLTVVR 182

Query: 260 IDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKN 292
           +D + NV++IKG+VPGKPG LL I PA IVG++
Sbjct: 183 VDAERNVLLIKGSVPGKPGALLNIQPATIVGES 212

[Close]

BLAST of Cmc11g0314071 vs. ExPASy Swiss-Prot
Match: B1XJT9 (50S ribosomal protein L3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=rplC PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.9e-64
Identity = 124/213 (58.22%), Postives = 165/213 (77.46%), Query Frame = 0


Query: 80  IGVMATKLGMMSFFEPD-GKVVPVTVVGFKEGN-IVTQVKTEATDGYSAVQVGYRRVRDR 139
           +G++ TKLGM   F+ + G  +PVTVV  + G   VTQ+KT  TDGY++VQ+GY  V+++
Sbjct: 3   LGILGTKLGMTQIFDNETGTAIPVTVV--QAGPCTVTQIKTSETDGYTSVQIGYGDVKEK 62

Query: 140 KLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKG 199
            LTKP+LGHL+KA A P+RHL+E+RL+ V G+E  Q +  N +F+ G +VDVSG TIG+G
Sbjct: 63  NLTKPQLGHLKKADAAPLRHLKEYRLDDVSGYELGQAITAN-IFEAGQVVDVSGNTIGRG 122

Query: 200 FQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIV 259
           F G  KRHNFKRG M+HGSK+HR  GS GAGTTPGRVY GK+M GR GGTK  +RKL++V
Sbjct: 123 FAGYQKRHNFKRGNMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTKITVRKLEVV 182

Query: 260 KIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGK 291
           ++DE+ N+++IKGA+PGK GNLL IAP+ IVG+
Sbjct: 183 RVDEEKNLLLIKGAIPGKAGNLLSIAPSNIVGQ 212

[Close]

BLAST of Cmc11g0314071 vs. ExPASy TrEMBL
Match: A0A1S3CBR5 (50S ribosomal protein L3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499009 PE=3 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.1e-156
Identity = 293/295 (99.32%), Postives = 293/295 (99.32%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTR 60
           MSIISFSSASASTKHPIFTNNP  SSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTR
Sbjct: 1   MSIISFSSASASTKHPIFTNNP--SSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTR 60

Query: 61  RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA 120
           RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA
Sbjct: 61  RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA 120

Query: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL 180
           TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL
Sbjct: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL 180

Query: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240
           FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM
Sbjct: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240

Query: 241 PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 296
           PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 293

[Close]

BLAST of Cmc11g0314071 vs. ExPASy TrEMBL
Match: A0A5A7TD05 (50S ribosomal protein L3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002680 PE=3 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 9.6e-156
Identity = 292/295 (98.98%), Postives = 292/295 (98.98%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTR 60
           MSIISFSSASASTKHPIFTNNP  SSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHF TR
Sbjct: 1   MSIISFSSASASTKHPIFTNNP--SSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFATR 60

Query: 61  RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA 120
           RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA
Sbjct: 61  RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA 120

Query: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL 180
           TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL
Sbjct: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL 180

Query: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240
           FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM
Sbjct: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240

Query: 241 PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 296
           PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 293

[Close]

BLAST of Cmc11g0314071 vs. ExPASy TrEMBL
Match: A0A0A0K9U5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G078530 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.0e-153
Identity = 288/295 (97.63%), Postives = 292/295 (98.98%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTR 60
           MSIISFSSASASTKHPIFTNNP SSSSSSSSSSLTLRTSFLALPLKSH+KNNLRFHFPTR
Sbjct: 1   MSIISFSSASASTKHPIFTNNP-SSSSSSSSSSLTLRTSFLALPLKSHNKNNLRFHFPTR 60

Query: 61  RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA 120
            TTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKT+A
Sbjct: 61  PTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTDA 120

Query: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL 180
           TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVD FEPNQRLVFNEL
Sbjct: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDAFEPNQRLVFNEL 180

Query: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240
           FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM
Sbjct: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240

Query: 241 PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 296
           PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVG+NIPK+
Sbjct: 241 PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGQNIPKS 294

[Close]

BLAST of Cmc11g0314071 vs. ExPASy TrEMBL
Match: A0A6J1KXN5 (50S ribosomal protein L3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499138 PE=3 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.2e-145
Identity = 271/295 (91.86%), Postives = 282/295 (95.59%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTR 60
           MS+IS SSAS S +HPIFTNN   +SSSS SSSL LRTSFLALPLKSH  NN+RF FP  
Sbjct: 1   MSVISISSASTSKRHPIFTNN---ASSSSPSSSLKLRTSFLALPLKSHRNNNVRFQFPRP 60

Query: 61  RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA 120
           RTTRRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQ+KTEA
Sbjct: 61  RTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTEA 120

Query: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL 180
           TDGYSAVQVGYRRVRDRKLTKPE+GHL+KAGAIPMRHLQEFRLES+DGFEPNQRLVFNEL
Sbjct: 121 TDGYSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDGFEPNQRLVFNEL 180

Query: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240
           FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKM
Sbjct: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKM 240

Query: 241 PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 296
           PGRMGGTKRKIRKLKIVKID+DLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 PGRMGGTKRKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of Cmc11g0314071 vs. ExPASy TrEMBL
Match: A0A6J1H630 (50S ribosomal protein L3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111460446 PE=3 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 2.0e-145
Identity = 271/295 (91.86%), Postives = 281/295 (95.25%), Query Frame = 0


Query: 1   MSIISFSSASASTKHPIFTNNPSSSSSSSSSSSLTLRTSFLALPLKSHHKNNLRFHFPTR 60
           MS+IS S AS S +HPIFTNN   +SSSS SSSL LRTSFLALPLKSH  NNLRF FP  
Sbjct: 1   MSVISISLASTSNRHPIFTNN---ASSSSPSSSLKLRTSFLALPLKSHRNNNLRFQFPRP 60

Query: 61  RTTRRPSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEA 120
           RTTRRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQ+KTEA
Sbjct: 61  RTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQIKTEA 120

Query: 121 TDGYSAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL 180
           TDGYSAVQVGYRRVRDRKLTKPE+GHL+KAGAIPMRHLQEFRLES+DGFEPNQRLVFNEL
Sbjct: 121 TDGYSAVQVGYRRVRDRKLTKPEMGHLQKAGAIPMRHLQEFRLESIDGFEPNQRLVFNEL 180

Query: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKM 240
           FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKM
Sbjct: 181 FKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKM 240

Query: 241 PGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 296
           PGRMGGTKRKIRKLKIVKID+DLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 241 PGRMGGTKRKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 292

[Close]

BLAST of Cmc11g0314071 vs. TAIR 10
Match: AT2G43030.1 (Ribosomal protein L3 family protein )

HSP 1 Score: 390.6 bits (1002), Expect = 1.1e-108
Identity = 191/230 (83.04%), Postives = 211/230 (91.74%), Query Frame = 0


Query: 66  PSDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYS 125
           P     V  SMEAGIGVM +KLGMMSFFE DG VVPVTVVGF+EGNIVTQ+KT ATDGY 
Sbjct: 42  PKTRFVVSSSMEAGIGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYD 101

Query: 126 AVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGD 185
           AVQ+GYRRVRD+KLTKPE GHL+KAG IPMRHLQEFRL +++GFEPNQ+LVF+E+FKEGD
Sbjct: 102 AVQIGYRRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGD 161

Query: 186 LVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMG 245
           LVDV+GTTIGKGFQGGIKRH+FKRG M+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMG
Sbjct: 162 LVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMG 221

Query: 246 GTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 296
           GT+ KIRKLKIVK+D++LNVVMIKGA+PGKPGNLLRI PAKIVG NIPKN
Sbjct: 222 GTRTKIRKLKIVKVDKELNVVMIKGALPGKPGNLLRITPAKIVGVNIPKN 271

[Close]

BLAST of Cmc11g0314071 vs. TAIR 10
Match: AT3G17465.1 (ribosomal protein L3 plastid )

HSP 1 Score: 141.0 bits (354), Expect = 1.6e-33
Identity = 82/206 (39.81%), Postives = 123/206 (59.71%), Query Frame = 0


Query: 81  GVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLT 140
           G++A K GM + ++  GK +P++++ + + NIV+QVKT   +G  A+Q+G  + + + L+
Sbjct: 78  GIIAVKCGMTALWDKWGKRIPISIL-WVDDNIVSQVKTVEKEGIFALQIGCGQKKPKHLS 137

Query: 141 KPELGHLEKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQG 200
           K  +GH    G    R L+EF + + D   P    +    F  G  VDV+G T GKGFQG
Sbjct: 138 KAVVGHFRAQGVPLKRKLREFPV-TEDALLPVGTSLGVRHFVPGQYVDVTGITRGKGFQG 197

Query: 201 GIKRHNFKRGPMSHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKI 260
            +KRH F   P SHG S SHR+ GS G    PG+V+KG+KM GRMG  +R ++ + + KI
Sbjct: 198 CMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRTVKNVWVYKI 257

Query: 261 DEDLNVVMIKGAVPGKPGNLLRIAPA 286
           D   N++ ++G VPG  GN + I  A
Sbjct: 258 DPARNLMWVRGQVPGAEGNFVFIKDA 281

The following BLAST results are available for this feature:

BLAST of Cmc11g0314071 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460096.1	2.3e-156	99.32	PREDICTED: 50S ribosomal protein L3, chloroplastic [Cucumis melo]	[more]
KAA0039986.1	2.0e-155	98.98	50S ribosomal protein L3 [Cucumis melo var. makuwa]	[more]
XP_004154027.1	4.1e-153	97.63	50S ribosomal protein L3, chloroplastic [Cucumis sativus] >KGN46258.1 hypothetic...	[more]
XP_038876222.1	4.9e-146	93.24	50S ribosomal protein L3, chloroplastic [Benincasa hispida]	[more]
KAG6574805.1	8.3e-146	92.20	50S ribosomal protein L3, chloroplastic, partial [Cucurbita argyrosperma subsp. ...	[more]

BLAST of Cmc11g0314071 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80360	1.5e-110	77.82	50S ribosomal protein L3, chloroplastic (Fragment) OS=Nicotiana tabacum OX=4097 ...	[more]
Q9SKX4	1.6e-107	83.04	50S ribosomal protein L3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL...	[more]
P82191	4.6e-107	71.96	50S ribosomal protein L3, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL3 PE=...	[more]
B0C1D3	1.7e-64	57.28	50S ribosomal protein L3 OS=Acaryochloris marina (strain MBIC 11017) OX=329726 G...	[more]
B1XJT9	2.9e-64	58.22	50S ribosomal protein L3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR...	[more]

BLAST of Cmc11g0314071 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBR5	1.1e-156	99.32	50S ribosomal protein L3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499009 ...	[more]
A0A5A7TD05	9.6e-156	98.98	50S ribosomal protein L3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A0A0K9U5	2.0e-153	97.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G078530 PE=3 SV=1	[more]
A0A6J1KXN5	1.2e-145	91.86	50S ribosomal protein L3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1H630	2.0e-145	91.86	50S ribosomal protein L3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Cmc11g0314071 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43030.1	1.1e-108	83.04	Ribosomal protein L3 family protein	[more]
AT3G17465.1	1.6e-33	39.81	ribosomal protein L3 plastid	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 207..287 e-value: 5.3E-21 score: 76.8
None	No IPR available	GENE3D	3.30.160.810		coord: 112..171 e-value: 1.2E-20 score: 75.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR11229:SF16	50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC	coord: 74..294
IPR019927	Ribosomal protein L3, bacterial/organelle-type	TIGRFAM	TIGR03625	TIGR03625	coord: 81..282 e-value: 2.4E-74 score: 247.5
IPR019927	Ribosomal protein L3, bacterial/organelle-type	PANTHER	PTHR11229	50S RIBOSOMAL PROTEIN L3	coord: 74..294
IPR019927	Ribosomal protein L3, bacterial/organelle-type	HAMAP	MF_01325_B	Ribosomal_L3_B	coord: 79..286 score: 35.790138
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 175..261 e-value: 3.6E-17 score: 62.4
IPR019926	Ribosomal protein L3, conserved site	PROSITE	PS00474	RIBOSOMAL_L3	coord: 181..204
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 79..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0314071.1	Cmc11g0314071.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome