Cmc11g0313281 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0313281
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	BEST Arabidopsis thaliana protein match is: reduced male fertility .
Location	CMiso1.1chr11: 32661601 .. 32666641 (+)
RNA-Seq Expression	Cmc11g0313281
Synteny	Cmc11g0313281

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTGAATCTCTAAGCAACAGAAAACAAAATAGAGGCTCTGCATTTAAACAACGTCCATGGCGAAGAAACTGAGCATTGCCTCAGCGAGAGATCGAGTGGTTACAAGATCTCAATCCATTTCCATGGAGCGTGCAAAAATGTCGAAGCGATCTTCGCCAAAAAATAATCCAGTTGTTGCTGCAGAGCCGGAAGGAATGGTAAAGCGAATGCGGAGAGATATTAAGCCGATTCATTCTTGTAGCTCTCCTCATTCCGCTTTTCTTACTGCACATTCTTCTGCTTCATCCTCTGCATCTTCGTCTTCCTGCTGGTTCGTTCTCTTCCTCTTTCTGTCTCAATCCTCATAGTCGCTGTTCGTACGCAATTTCGATTCTGATACGAGTTTCGCGCGTAAACATGTGTCTGCTTGTAGAGGTAAATGCCTATGTGTTTTTTAGTATAGTGATAATTAGGAAATTGAAATTTAAGTTTCTAGAAGTGATTGAATTACTTAGTTCACGAAATTGAGATGCAAAGTTTTTCCTATAGTTTAAAGCTCTCTGAGGTCGATTGCGTAGCTCGCATCTGTTTTGTACTGCTGAGGACTTTGAAGTAGAATGAAATGAATAATTAGAGTTGTTTCTGTGAGATTCCGAAGCTCAAGGTGAACGTCTGCAGAGTTAAATCTAGGCAGAGTAAACTTGTTCGTTTTCTCCATCAGAGAAGATGATGAAGAAGAAACGTTTACTCGTGATTTTAGGATTTGCAAACTGAATGTGAAAATATTTGTTGAAAATCGCTACGCGTTGATAAACACTTTCTGGAACTCTAAAAATTTAATCGCAAGTACATTTTGTAATATAATTAGTTTTTCCAAATTTTCAGTATAGTTTGATTGTTTGTTTGTCACAAGGATCGAAGTAAATTCAGGATTCTTTCAATTTATAGCTACTTCAGTAGTACATTTCTTACTTTCGATCAAATTAAGTATTCCGAGTCCCCTGGTTTTCTTATTTACTTCATTATTTACTTTCCTATATTTTTTGGTTCTACATATATGATTTCAAAAAGACGTTTGTTCTATGTTTCCATATTCAATTCTAAATCAGTTGTTATTTCAGTTTCAGTAATCAAAAGTTCATTTGTTTATTCAGCCATTAGTCTGGCTTAACTTTGGTTGATGGGGTTTAAGATTGATGAATCATAGAAAGTATAAATTGTTTCCGACAGTTTGACTGTTTAATCAGAAACAAAGTTGAGGAACAATATGTAATTTAACCTTCCGTATGACAATTTCCTTGAACAAACATGAAAGGTACGACGCGGACGTTTGGACAGAGGTAGCGAAGTTTCTGGATGGAAGATCTTTAATGATGCTTGCGGCTACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAACATACTGCCTTTAAATGGATCAAACTCTACGTTTCTGCCTTCGGTAAGGATTGGATTCAAGTTCTCCCATTTGTATTCCTGCTCTGGTGAATGCGTATTGCGTTTGCTTAACTATTGAATGACCTGTGTTCCAGACGGAAGCCACTCTTACATTTTCCGGCAGCCGGAGAAACATCTCGGTGAGTGATTTTGATTCCACTTGACCCCTTAAAGTTATTTGGCATCCTGTTGTACTTAACTACAACAAAATGGCAAGGACCTGTTTATCCACGGCTACTGTGTAATCTTATATCAGTCTATCAAATCTTACCTAGTAGATATATAGTGATCCTGATTCCAATTTACTATTGAATTATAGTTTGCTTCTATACCATATCGTTTATTGATTTCATTGAAATCAGATTGGATGCGAATTGGGGCATTTTTCCTAGATTCTTCAGTAGCACTACTGTCAGAAAGGCTAGGCTCCCAAATGAAAGTTCCAAAACAGGGTTCAACGGCTAACACATTGGAGTCCGGTTGTTGTGTATTGCACAATGTTAAAACTGGGATCTGGATAGCTGGTATCGAGCTTGCTAAATGTTTTTGACATTTTCTTTCAATTGCTGTTATAACTTGATACTCCCTTTAACCTTTTCTCGAGTAAGTTTATATTCCAAATGGATTAATGTTTTTGACATTTTCTTTCAGATCTGCAACTTGTTCGTTGTCCCGTTTGCGACCTGAATACATGTGATGGTAAGCACCCCACGTATAGGAACCTCTTTATGCCAAATGCAAGATCTTCGCCTGCAGTTTCTAGTAATTGGTATCCCATACTATGTTTAAAAGAATTGAGGAACTCATAAGCTTATTCACTTCCAAATTTCATTGAAAATAAATTAAATCTTGATTTCCAATACCTTAGGAAAGTGGATGATACGAGCACATACCCTATGCATCTGCTGATCAGCATTAGTTCATTGTAAATAGAAACACGCCCATATAAGAACTCAATCTAAGCGCATCATCAAAGAATTCGTATTTCAAAATTGTAAATAGTGGATATATAGCTGCAGAAAATTAACTACAATTGGCTATTGCTGATCCTACTATTATTATCAGGAACAATGCAGACGTTGGATGCTAGGCACATAGAGCTGTTCCTAAATGAAGGTTACCAAGATGGTAGTTGGGAGTATCAGATTGTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTCAAGCACCTGGAAGACTCTTCAACATCAGGTATAACATCAAGTTAATAATTTAGGTACCATCCATGTAAATTTAAAGTATGCTTAGTTTAACTTTTGACGTAAAAATAAATCATTTAAAAAAAAAAAGTTAAAATATTTGACAACACTGAAAGATGGTTTTCGAAAAACTTTCGAAGTTTATTTTGAAAAACACTTTTTTATCTACTCTTAATGAAATTCGTAAACTATTGAAGAATGCTTTTGTTCTTTCTTTAGCTGAAAATTATAATCATAGATGGTGAAATATGCTAAATTTCTATAATTAACCTAAGCCTAGTGGTTTAACGTGTTACAAATTCAACAACACGAGAAAGAACTGAGTTCAAATTCCTGGAACCTTCATTAAGTTTTTAGATGTTGAATGTTATTATAAGACATTGTTCTACGTCAAGAGAAATTGAGCTAATTCAAGAGATTGAATTATGAACAATATGATGAGATTTTTCCCAAATGAATTGAACAGGAATACTGGATCTGAAGTCATGGACAGGAAGTCGGGCTGATTGGCAACCAAAGGCAATGATTACTCTCAGCGCTGTTGCTGTAAACACCTATTTACAAGACAACGAAGGTAAATCGATCACCTCCAGTTTTTATACGATACTCAAGACGGTGAAAATTACTTTTTATCATTTAAAAAACTTTTTTTTTTAGAATTTTCTTAGTCTTCAGTCCAGTCGATTATAAGATGGGTTCTAGAAACATGGTAAATACTTCATTAAAAGAATTAAGTGATAGGTTCTATACTTTTAAAATACTTTCAAGATGTCTCTTAATAATCATCCTAGTCCAAACAAACAGTTTAATGACTTAACTATGTTTGAGAGTGATTTTAAAATTATTAAAGCTTTCGTCGTTCCTTAAAATCCTTTTAAAACACACTTTTATGTCATATAAAATTATTCAAATGTTTAATTTTATACTCGTAAATATAATTTTCATATTATCAAAATTGATTTTAAATGCTTGAGAGTATATTTAATAAAATTTTAAAAATGATAGAAGTGATTTTAAGCATCTCAAAATTACTCTTAAACATGGTGACTTCAACTAGAAGTGATATTGATCATGAAAAAAAGTGATTATAGCCACATCAAAAATCACTCGTACTTTCCAACTCTATGCACTCTAAATACACTCGTAAATAAAACATTTTATGATATGTTTGAATTAACTTTTTAAATACTTTAAATTTTTTAATACTTTAAAATTCAATTCAAACAAGTTCCATTTATATAAAATAGAGAAAAAAAAATGTTTTTCATCATGAGAATAAATCACTCTTAAACATAACCCAACTTCTTGAATTCATTGATTAGTAATATAAATGATTAGAATTGAGCATAGTATAGTGGTTGATTGAGATGTGTAATTTGTATGGCGAATGCAGGAGTTCACGTGAAATATCAAGCCATGAGAGCCGGAGCAAACGGAGAGGTGGTTTCTATCCGAATTTCTCAGCAGCTTCTTTAGTTCCTTCCTTCTTTTATTATTCCTTCTCTTTTTCCCCTTTGAACTTCACACCCAACTCACTATACCATGCGCCAAATAAGTATATACCCGAACGAAAACTAAACTAAATAACCATTTCTACAAATTAATGCCTTTTGCTTTCTAACCCTTTCTCATTAACAAATTATGTTTCAAATCATTTTTCTACTTCTTAAAATGGAAATCATTTTCTTTGTTATTCAAAACTTGAAAAAAAAAAAATCTATTGCTTGACTTATTGAATTTGAATTTATTGTCTGTCTAGAATAATAGATTGATTTTGATGTACATATCGATTAAGTTGTGTTTTTCCAATTACTCGAGACGATATTAATAACACAAAAATGAGAGTTTGGTTTTCAAACTGAAAACCAGCATACAATAAAAGTTACAATAATAAGTTTTATAGAGCAACCGCTAATCATGTATACAAAAATTTACAATTTCCCATTACTAACTCCAATACAAAAACACAAAAAAGAAAAGTATGTCGTTTTAGTTTATTATAGCTATCAAAAGTGCAAGGACCACACACACACACACAACTAATGACTACTTACTTCACTATTTGTAAAAAGATCGTAAAGAAAATACAAGAAGATCATCCTAATTTCCATTACAAGTTTATGGAGAGAAGTCAAAGTGGCTACAATGGTAAAAAGTTACATTCACTTTCTGGCAAGAAGCTTCTTTGGAAGCTTGTCCAAAGGGGTAGATTTGAGCAAGAAAAGCCTTACTGCCCTCTCTTGTAAAGTACCTCCACACTTCAACCCACGTGCTTGCAGTTCGGACTTTAGCCTTTCCAAACC

mRNA sequence

TTTTTTTGAATCTCTAAGCAACAGAAAACAAAATAGAGGCTCTGCATTTAAACAACGTCCATGGCGAAGAAACTGAGCATTGCCTCAGCGAGAGATCGAGTGGTTACAAGATCTCAATCCATTTCCATGGAGCGTGCAAAAATGTCGAAGCGATCTTCGCCAAAAAATAATCCAGTTGTTGCTGCAGAGCCGGAAGGAATGGTAAAGCGAATGCGGAGAGATATTAAGCCGATTCATTCTTGTAGCTCTCCTCATTCCGCTTTTCTTACTGCACATTCTTCTGCTTCATCCTCTGCATCTTCGTCTTCCTGCTGGTACGACGCGGACGTTTGGACAGAGGTAGCGAAGTTTCTGGATGGAAGATCTTTAATGATGCTTGCGGCTACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAACATACTGCCTTTAAATGGATCAAACTCTACGTTTCTGCCTTCGACGGAAGCCACTCTTACATTTTCCGGCAGCCGGAGAAACATCTCGATTGGATGCGAATTGGGGCATTTTTCCTAGATTCTTCAGTAGCACTACTGTCAGAAAGGCTAGGCTCCCAAATGAAAGTTCCAAAACAGGGTTCAACGGCTAACACATTGGAGTCCGGTTGTTGTGTATTGCACAATGTTAAAACTGGGATCTGGATAGCTGATCTGCAACTTGTTCGTTGTCCCGTTTGCGACCTGAATACATGTGATGGAACAATGCAGACGTTGGATGCTAGGCACATAGAGCTGTTCCTAAATGAAGGTTACCAAGATGGTAGTTGGGAGTATCAGATTGTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTCAAGCACCTGGAAGACTCTTCAACATCAGGAATACTGGATCTGAAGTCATGGACAGGAAGTCGGGCTGATTGGCAACCAAAGGCAATGATTACTCTCAGCGCTGTTGCTGTAAACACCTATTTACAAGACAACGAAGGAGTTCACGTGAAATATCAAGCCATGAGAGCCGGAGCAAACGGAGAGGTGGTTTCTATCCGAATTTCTCAGCAGCTTCTTTAGTTCCTTCCTTCTTTTATTATTCCTTCTCTTTTTCCCCTTTGAACTTCACACCCAACTCACTATACCATGCGCCAAATAAGTATATACCCGAACGAAAACTAAACTAAATAACCATTTCTACAAATTAATGCCTTTTGCTTTCTAACCCTTTCTCATTAACAAATTATGTTTCAAATCATTTTTCTACTTCTTAAAATGGAAATCATTTTCTTTGTTATTCAAAACTTGAAAAAAAAAAAATCTATTGCTTGACTTATTGAATTTGAATTTATTGTCTGTCTAGAATAATAGATTGATTTTGATGTACATATCGATTAAGTTGTGTTTTTCCAATTACTCGAGACGATATTAATAACACAAAAATGAGAGTTTGGTTTTCAAACTGAAAACCAGCATACAATAAAAGTTACAATAATAAGTTTTATAGAGCAACCGCTAATCATGTATACAAAAATTTACAATTTCCCATTACTAACTCCAATACAAAAACACAAAAAAGAAAAGTATGTCGTTTTAGTTTATTATAGCTATCAAAAGTGCAAGGACCACACACACACACACAACTAATGACTACTTACTTCACTATTTGTAAAAAGATCGTAAAGAAAATACAAGAAGATCATCCTAATTTCCATTACAAGTTTATGGAGAGAAGTCAAAGTGGCTACAATGGTAAAAAGTTACATTCACTTTCTGGCAAGAAGCTTCTTTGGAAGCTTGTCCAAAGGGGTAGATTTGAGCAAGAAAAGCCTTACTGCCCTCTCTTGTAAAGTACCTCCACACTTCAACCCACGTGCTTGCAGTTCGGACTTTAGCCTTTCCAAACC

Coding sequence (CDS)

ATGGCGAAGAAACTGAGCATTGCCTCAGCGAGAGATCGAGTGGTTACAAGATCTCAATCCATTTCCATGGAGCGTGCAAAAATGTCGAAGCGATCTTCGCCAAAAAATAATCCAGTTGTTGCTGCAGAGCCGGAAGGAATGGTAAAGCGAATGCGGAGAGATATTAAGCCGATTCATTCTTGTAGCTCTCCTCATTCCGCTTTTCTTACTGCACATTCTTCTGCTTCATCCTCTGCATCTTCGTCTTCCTGCTGGTACGACGCGGACGTTTGGACAGAGGTAGCGAAGTTTCTGGATGGAAGATCTTTAATGATGCTTGCGGCTACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAACATACTGCCTTTAAATGGATCAAACTCTACGTTTCTGCCTTCGACGGAAGCCACTCTTACATTTTCCGGCAGCCGGAGAAACATCTCGATTGGATGCGAATTGGGGCATTTTTCCTAGATTCTTCAGTAGCACTACTGTCAGAAAGGCTAGGCTCCCAAATGAAAGTTCCAAAACAGGGTTCAACGGCTAACACATTGGAGTCCGGTTGTTGTGTATTGCACAATGTTAAAACTGGGATCTGGATAGCTGATCTGCAACTTGTTCGTTGTCCCGTTTGCGACCTGAATACATGTGATGGAACAATGCAGACGTTGGATGCTAGGCACATAGAGCTGTTCCTAAATGAAGGTTACCAAGATGGTAGTTGGGAGTATCAGATTGTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTCAAGCACCTGGAAGACTCTTCAACATCAGGAATACTGGATCTGAAGTCATGGACAGGAAGTCGGGCTGATTGGCAACCAAAGGCAATGATTACTCTCAGCGCTGTTGCTGTAAACACCTATTTACAAGACAACGAAGGAGTTCACGTGAAATATCAAGCCATGAGAGCCGGAGCAAACGGAGAGGTGGTTTCTATCCGAATTTCTCAGCAGCTTCTTTAG

Protein sequence

MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL

Homology

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BLAST of Cmc11g0313281 vs. NCBI nr
Match: TYK24589.1 (putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 713.8 bits (1841), Expect = 7.6e-202
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60
           MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS
Sbjct: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60

Query: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120
           CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED
Sbjct: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120

Query: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180
           SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV
Sbjct: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180

Query: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240
           ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ
Sbjct: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240

Query: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300
           TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS
Sbjct: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300

Query: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 357
           WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 356

[Close]

BLAST of Cmc11g0313281 vs. NCBI nr
Match: XP_004140675.1 (probable F-box protein At3g61730 [Cucumis sativus] >KGN46347.1 hypothetical protein Csa_005078 [Cucumis sativus])

HSP 1 Score: 688.7 bits (1776), Expect = 2.6e-194
Identity = 344/356 (96.63%), Postives = 349/356 (98.03%), Query Frame = 0


Query: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60
           M KKLSIASARDRVVTRSQSISMERAKM+KRSSPK NPVVAAEPEGMVKRMRRDIKPIHS
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPK-NPVVAAEPEGMVKRMRRDIKPIHS 60

Query: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120
           CSSP SAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYR VMED
Sbjct: 61  CSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMED 120

Query: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180
           SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV
Sbjct: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180

Query: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240
           ALLSERLGSQMK+PKQ ST NTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ
Sbjct: 181 ALLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240

Query: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300
           TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSG+LDLKS
Sbjct: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKS 300

Query: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 357
           WTG+R DWQPKAMITL+AVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 WTGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]

BLAST of Cmc11g0313281 vs. NCBI nr
Match: XP_008459999.1 (PREDICTED: probable F-box protein At3g61730 [Cucumis melo])

HSP 1 Score: 679.1 bits (1751), Expect = 2.1e-191
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0


Query: 23  MERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSS 82
           MERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSS
Sbjct: 1   MERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSS 60

Query: 83  SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 142
           SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK
Sbjct: 61  SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 120

Query: 143 WIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANT 202
           WIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANT
Sbjct: 121 WIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANT 180

Query: 203 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 262
           LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY
Sbjct: 181 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 240

Query: 263 QIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVN 322
           QIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVN
Sbjct: 241 QIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVN 300

Query: 323 TYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 357
           TYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 TYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 334

[Close]

BLAST of Cmc11g0313281 vs. NCBI nr
Match: XP_038875515.1 (probable F-box protein At3g61730 [Benincasa hispida])

HSP 1 Score: 674.9 bits (1740), Expect = 3.9e-190
Identity = 339/356 (95.22%), Postives = 344/356 (96.63%), Query Frame = 0


Query: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60
           M KKLSIASARDRVVTRS SI+MERAKMSKRSSP  N VVAAEPEG VKRMRRDIKPIHS
Sbjct: 1   MGKKLSIASARDRVVTRSLSIAMERAKMSKRSSP--NSVVAAEPEGTVKRMRRDIKPIHS 60

Query: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120
           CSSP SAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED
Sbjct: 61  CSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120

Query: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180
           SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSV
Sbjct: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSV 180

Query: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240
           ALLSERLGSQMK+PKQ ST  TLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ
Sbjct: 181 ALLSERLGSQMKIPKQDSTDKTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240

Query: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300
           TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKS
Sbjct: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKS 300

Query: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 357
           WTGSR DWQPKAMITL+AVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 WTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 354

[Close]

BLAST of Cmc11g0313281 vs. NCBI nr
Match: XP_023548391.1 (probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 664.5 bits (1713), Expect = 5.3e-187
Identity = 332/356 (93.26%), Postives = 342/356 (96.07%), Query Frame = 0


Query: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60
           M KKLSIASARDRVVTRSQSI+MER K+S  SSP  NPVVA EPEGMVKRMRRDIKPIHS
Sbjct: 1   MGKKLSIASARDRVVTRSQSIAMEREKIS--SSP--NPVVAVEPEGMVKRMRRDIKPIHS 60

Query: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120
           CSSP S FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED
Sbjct: 61  CSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120

Query: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180
           SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV
Sbjct: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSV 180

Query: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240
            LLSERLGSQ+K+PKQ ST NTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ
Sbjct: 181 VLLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240

Query: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300
           TLDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKS
Sbjct: 241 TLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKS 300

Query: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 357
           WTGSR DWQPKAMITL+AVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 WTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 352

[Close]

BLAST of Cmc11g0313281 vs. ExPASy Swiss-Prot
Match: Q9M365 (Probable F-box protein At3g61730 OS=Arabidopsis thaliana OX=3702 GN=RMF PE=1 SV=2)

HSP 1 Score: 390.2 bits (1001), Expect = 2.5e-107
Identity = 187/342 (54.68%), Postives = 252/342 (73.68%), Query Frame = 0


Query: 25  RAKMSKRSSPKNNPVVAAEPEGMVKRM---------RRDIKPIHSCSSPHSAFLTAHSSA 84
           + K+ + +  KN+  +  E +G  KR           + ++ I  C SP  +  T  S  
Sbjct: 28  KRKLVQSNEQKND--IQREEDGRAKRRIVQSSDQKNGKILRGIRGCVSPRCSAQTYQSRF 87

Query: 85  SSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPA 144
           S        WY+ D+WT +++FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQVP 
Sbjct: 88  S--------WYEQDIWTYISRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVPV 147

Query: 145 PQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPK 204
           P   +  WIK+Y SAFDGSHSY+FRQ EKH+DWMRIGAF LDS  +LL+E L  ++K P+
Sbjct: 148 PFPVSSTWIKIYASAFDGSHSYLFRQKEKHIDWMRIGAFVLDSRTSLLTESLSGRLKFPR 207

Query: 205 QGSTANTLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEG 264
           +G+    L+ SG C+++++K+GIWIADLQLVRCPVCDL+TCDGTMQTLDARHIELFL+EG
Sbjct: 208 EGTIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLSTCDGTMQTLDARHIELFLSEG 267

Query: 265 YQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMI 324
           Y+DGSW+Y ++GSH ++K   +A GAIFD+KHL++SS SGIL+LKSWTG   D QPKA+I
Sbjct: 268 YKDGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYSGILNLKSWTGESNDSQPKAVI 327

Query: 325 TLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 357
              AVAV+T LQ+NEG+ VKY  M+AG +G++VSIRISQQLL
Sbjct: 328 APHAVAVHTRLQENEGILVKYHTMKAGTDGDIVSIRISQQLL 359

[Close]

BLAST of Cmc11g0313281 vs. ExPASy Swiss-Prot
Match: Q9FGB8 (Probable F-box protein At5g36000 OS=Arabidopsis thaliana OX=3702 GN=At5g36000 PE=2 SV=2)

HSP 1 Score: 381.3 bits (978), Expect = 1.2e-104
Identity = 181/336 (53.87%), Postives = 243/336 (72.32%), Query Frame = 0


Query: 30  KRSSPKNNPVVAAEPEGMVKRMRRD--------IKPIHSCSSPHSAFLTAHSSASSSASS 89
           KR   ++N +   E  G  +R+ +         ++ IH C SP  +  T  S  S     
Sbjct: 28  KRKLVQSNDIQRDEDGGAKRRIIQSSDQKNGKILRGIHGCVSPRCSAPTYQSRFS----- 87

Query: 90  SSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAF 149
              WY+ D+WT + +FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQVP     + 
Sbjct: 88  ---WYEQDIWTYITRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVPETFPVSS 147

Query: 150 KWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTAN 209
            WIK+Y SAFDGSHSY+F Q EKH+DWMR+GAF LDS  + L+E L  ++KVP +G+   
Sbjct: 148 TWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAFVLDSRTSFLTESLSGRLKVPTEGTIEQ 207

Query: 210 TLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSW 269
            L+ SG C+++++K+GIWIADLQL+RCP+CDL+TCDGTMQTLD RHIELFL+EGY+DGSW
Sbjct: 208 MLQSSGSCLINDIKSGIWIADLQLLRCPLCDLSTCDGTMQTLDVRHIELFLSEGYKDGSW 267

Query: 270 EYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVA 329
           +Y ++GSH + K   +A GAIFD+KHL+ SS+SGIL+LKSWTG   D QPKA+I   AVA
Sbjct: 268 DYNLIGSHKLEKDASAACGAIFDLKHLKKSSSSGILNLKSWTGEADDSQPKAVIAPHAVA 327

Query: 330 VNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 357
           V+T LQ NEG+ VKY  M+AG +G++VSIRISQQLL
Sbjct: 328 VHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQQLL 355

[Close]

BLAST of Cmc11g0313281 vs. ExPASy TrEMBL
Match: A0A5D3DMQ8 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001350 PE=4 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 3.7e-202
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60
           MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS
Sbjct: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60

Query: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120
           CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED
Sbjct: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120

Query: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180
           SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV
Sbjct: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180

Query: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240
           ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ
Sbjct: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240

Query: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300
           TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS
Sbjct: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300

Query: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 357
           WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 356

[Close]

BLAST of Cmc11g0313281 vs. ExPASy TrEMBL
Match: A0A0A0KD88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087760 PE=4 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 1.3e-194
Identity = 344/356 (96.63%), Postives = 349/356 (98.03%), Query Frame = 0


Query: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60
           M KKLSIASARDRVVTRSQSISMERAKM+KRSSPK NPVVAAEPEGMVKRMRRDIKPIHS
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPK-NPVVAAEPEGMVKRMRRDIKPIHS 60

Query: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120
           CSSP SAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYR VMED
Sbjct: 61  CSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMED 120

Query: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180
           SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV
Sbjct: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180

Query: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240
           ALLSERLGSQMK+PKQ ST NTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ
Sbjct: 181 ALLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240

Query: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300
           TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSG+LDLKS
Sbjct: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKS 300

Query: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 357
           WTG+R DWQPKAMITL+AVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 WTGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]

BLAST of Cmc11g0313281 vs. ExPASy TrEMBL
Match: A0A1S3CBL0 (probable F-box protein At3g61730 OS=Cucumis melo OX=3656 GN=LOC103498945 PE=4 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 1.0e-191
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0


Query: 23  MERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSS 82
           MERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSS
Sbjct: 1   MERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSS 60

Query: 83  SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 142
           SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK
Sbjct: 61  SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 120

Query: 143 WIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANT 202
           WIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANT
Sbjct: 121 WIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANT 180

Query: 203 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 262
           LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY
Sbjct: 181 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 240

Query: 263 QIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVN 322
           QIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVN
Sbjct: 241 QIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVN 300

Query: 323 TYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 357
           TYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 TYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 334

[Close]

BLAST of Cmc11g0313281 vs. ExPASy TrEMBL
Match: A0A6J1DCT6 (probable F-box protein At3g61730 OS=Momordica charantia OX=3673 GN=LOC111019845 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.8e-169
Identity = 307/359 (85.52%), Postives = 323/359 (89.97%), Query Frame = 0


Query: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEG-MVKRMRRDIKP-- 60
           M KKLSI+SARDRVVTRSQS +MER ++SKRS     P+ AAEPEG M KR+RRD+K   
Sbjct: 1   MGKKLSISSARDRVVTRSQSSAMERERLSKRS-----PIAAAEPEGVMAKRIRRDVKHPI 60

Query: 61  IHSCSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLV 120
           IH CSSP SAFLT        ASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLV
Sbjct: 61  IHPCSSPRSAFLT--------ASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLV 120

Query: 121 MEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLD 180
           MEDSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAF +D
Sbjct: 121 MEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMD 180

Query: 181 SSVALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDG 240
           SSVALLSERLGSQ+K+PKQ S  N LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDG
Sbjct: 181 SSVALLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDG 240

Query: 241 TMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILD 300
           TMQTLDARHIELFLNEGYQDGSW+YQIVGSHDIRKPTE+ASGAIFDVKHLEDSSTSGILD
Sbjct: 241 TMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILD 300

Query: 301 LKSWTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 357
           +++W+G R DWQPKAMITL AVAVNTYLQDNEGVHVKYQAMR GANGEVVSIRISQQLL
Sbjct: 301 MQTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 346

[Close]

BLAST of Cmc11g0313281 vs. ExPASy TrEMBL
Match: A0A5A7TE30 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001900 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.4e-156
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 86  YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK 145
           YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK
Sbjct: 11  YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK 70

Query: 146 LYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANTLES 205
           LYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANTLES
Sbjct: 71  LYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANTLES 130

Query: 206 GCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIV 265
           GCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIV
Sbjct: 131 GCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIV 190

Query: 266 GSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVNTYL 325
           GSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVNTYL
Sbjct: 191 GSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVNTYL 250

Query: 326 QDNEGVHVKYQAMRAGANGEVVSIRISQQLL 357
           QDNEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 251 QDNEGVHVKYQAMRAGANGEVVSIRISQQLL 281

[Close]

BLAST of Cmc11g0313281 vs. TAIR 10
Match: AT5G36000.1 (BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 381.3 bits (978), Expect = 8.3e-106
Identity = 181/336 (53.87%), Postives = 243/336 (72.32%), Query Frame = 0


Query: 30  KRSSPKNNPVVAAEPEGMVKRMRRD--------IKPIHSCSSPHSAFLTAHSSASSSASS 89
           KR   ++N +   E  G  +R+ +         ++ IH C SP  +  T  S  S     
Sbjct: 28  KRKLVQSNDIQRDEDGGAKRRIIQSSDQKNGKILRGIHGCVSPRCSAPTYQSRFS----- 87

Query: 90  SSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAF 149
              WY+ D+WT + +FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQVP     + 
Sbjct: 88  ---WYEQDIWTYITRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVPETFPVSS 147

Query: 150 KWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTAN 209
            WIK+Y SAFDGSHSY+F Q EKH+DWMR+GAF LDS  + L+E L  ++KVP +G+   
Sbjct: 148 TWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAFVLDSRTSFLTESLSGRLKVPTEGTIEQ 207

Query: 210 TLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSW 269
            L+ SG C+++++K+GIWIADLQL+RCP+CDL+TCDGTMQTLD RHIELFL+EGY+DGSW
Sbjct: 208 MLQSSGSCLINDIKSGIWIADLQLLRCPLCDLSTCDGTMQTLDVRHIELFLSEGYKDGSW 267

Query: 270 EYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVA 329
           +Y ++GSH + K   +A GAIFD+KHL+ SS+SGIL+LKSWTG   D QPKA+I   AVA
Sbjct: 268 DYNLIGSHKLEKDASAACGAIFDLKHLKKSSSSGILNLKSWTGEADDSQPKAVIAPHAVA 327

Query: 330 VNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 357
           V+T LQ NEG+ VKY  M+AG +G++VSIRISQQLL
Sbjct: 328 VHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQQLL 355

[Close]

BLAST of Cmc11g0313281 vs. TAIR 10
Match: AT3G61730.1 (reduced male fertility )

HSP 1 Score: 372.9 bits (956), Expect = 3.0e-103
Identity = 183/342 (53.51%), Postives = 247/342 (72.22%), Query Frame = 0


Query: 25  RAKMSKRSSPKNNPVVAAEPEGMVKRM---------RRDIKPIHSCSSPHSAFLTAHSSA 84
           + K+ + +  KN+  +  E +G  KR           + ++ I  C SP  +  T  S  
Sbjct: 28  KRKLVQSNEQKND--IQREEDGRAKRRIVQSSDQKNGKILRGIRGCVSPRCSAQTYQSRF 87

Query: 85  SSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPA 144
           S        WY+ D+WT +++FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQVP 
Sbjct: 88  S--------WYEQDIWTYISRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVPV 147

Query: 145 PQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPK 204
           P   +  WIK+Y SAFDGSHSY+FRQ EKH     IGAF LDS  +LL+E L  ++K P+
Sbjct: 148 PFPVSSTWIKIYASAFDGSHSYLFRQKEKH-----IGAFVLDSRTSLLTESLSGRLKFPR 207

Query: 205 QGSTANTLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEG 264
           +G+    L+ SG C+++++K+GIWIADLQLVRCPVCDL+TCDGTMQTLDARHIELFL+EG
Sbjct: 208 EGTIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLSTCDGTMQTLDARHIELFLSEG 267

Query: 265 YQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMI 324
           Y+DGSW+Y ++GSH ++K   +A GAIFD+KHL++SS SGIL+LKSWTG   D QPKA+I
Sbjct: 268 YKDGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYSGILNLKSWTGESNDSQPKAVI 327

Query: 325 TLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 357
              AVAV+T LQ+NEG+ VKY  M+AG +G++VSIRISQQLL
Sbjct: 328 APHAVAVHTRLQENEGILVKYHTMKAGTDGDIVSIRISQQLL 354

[Close]

BLAST of Cmc11g0313281 vs. TAIR 10
Match: AT3G62500.1 (BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G61740.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 167.2 bits (422), Expect = 2.5e-41
Identity = 89/168 (52.98%), Postives = 115/168 (68.45%), Query Frame = 0


Query: 167 DWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVR 226
           DWM IGAF LDS  +LL+E L  ++KVPK+G+    L+                 LQLVR
Sbjct: 178 DWMPIGAFVLDSRTSLLTESLSGRLKVPKEGTIERMLQK---------------YLQLVR 237

Query: 227 CPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKH 286
            PVCDL     TMQTLDARHIELFL+EGY+DGSW+Y ++GSH ++K   +A GAIFD+KH
Sbjct: 238 -PVCDLR----TMQTLDARHIELFLSEGYKDGSWDYNLIGSHKLQKNASAACGAIFDLKH 297

Query: 287 LEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVK 335
            ++SS+SGIL+LKSWTG     QPKA+I   AVAV+T L++NE   ++
Sbjct: 298 HKESSSSGILNLKSWTGQPDISQPKAVIAPHAVAVHTRLRENEVAEIQ 325

The following BLAST results are available for this feature:

BLAST of Cmc11g0313281 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK24589.1	7.6e-202	100.00	putative F-box protein [Cucumis melo var. makuwa]	[more]
XP_004140675.1	2.6e-194	96.63	probable F-box protein At3g61730 [Cucumis sativus] >KGN46347.1 hypothetical prot...	[more]
XP_008459999.1	2.1e-191	100.00	PREDICTED: probable F-box protein At3g61730 [Cucumis melo]	[more]
XP_038875515.1	3.9e-190	95.22	probable F-box protein At3g61730 [Benincasa hispida]	[more]
XP_023548391.1	5.3e-187	93.26	probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc11g0313281 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M365	2.5e-107	54.68	Probable F-box protein At3g61730 OS=Arabidopsis thaliana OX=3702 GN=RMF PE=1 SV=...	[more]
Q9FGB8	1.2e-104	53.87	Probable F-box protein At5g36000 OS=Arabidopsis thaliana OX=3702 GN=At5g36000 PE...	[more]

BLAST of Cmc11g0313281 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DMQ8	3.7e-202	100.00	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A0A0KD88	1.3e-194	96.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087760 PE=4 SV=1	[more]
A0A1S3CBL0	1.0e-191	100.00	probable F-box protein At3g61730 OS=Cucumis melo OX=3656 GN=LOC103498945 PE=4 SV...	[more]
A0A6J1DCT6	1.8e-169	85.52	probable F-box protein At3g61730 OS=Momordica charantia OX=3673 GN=LOC111019845 ...	[more]
A0A5A7TE30	1.4e-156	100.00	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1...	[more]

BLAST of Cmc11g0313281 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G36000.1	8.3e-106	53.87	BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G617...	[more]
AT3G61730.1	3.0e-103	53.51	reduced male fertility	[more]
AT3G62500.1	2.5e-41	52.98	BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G6174...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 82..158 e-value: 5.2E-6 score: 28.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..40
None	No IPR available	PANTHER	PTHR47149	F-BOX PROTEIN RMF	coord: 25..356
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 89..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0313281.1	Cmc11g0313281.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding