Cmc11g0312961 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0312961
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionpre-mRNA-processing factor 39 isoform X2
LocationCMiso1.1chr11: 32440047 .. 32445350 (+)
RNA-Seq ExpressionCmc11g0312961
SyntenyCmc11g0312961
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCGCAATTACCCTCGCCCAGGCCTCGTTCTCTTTCTCAATATCAAACGAAGGGACCAACTCTCTCACTTCCTCTCCCATTTCCCCTCTCTTTCCCCTTTTCACCCTCAAATTCCTCAATTCCGCCTTGTGTTTTCCTTTCCACCAACTCTTCTTCTTCTTCTCCTTCTCCTTCTTCATCTTCATCTGGTTCCCGGTAAGTTCCTTTTCCCTCCCTTTTCTTTCTATTTTCTTCTTTAGCCACTGTTCCCCCCTAGATTCAGTTTAGTCTGTGCTCGAACATTCATTCAATTCGTCTCCTGTCATGTTCTCTACCGATTGTCTTATTACTTTTGTATTTCTTTGTTATCATATATTCTTCTTCCATTTCCAGCATGTATGCATATTCTTTTAACTACTTATTTATATGTTTGTGTTATCATTGGGTTAGCTTTAAAGTAGTTTAGAAACAGGGGTTAATGCTTTTCAAGTAAAGGGTATCGCGGGAATATGTTAGAAATTGCTTTTTTTTTTCTGGGACTAGTTGCATTTTTGAAAGCCACATCCCTTTTGTCTGGGTTTTGTTATCCATGCCCTTCTCCGCATCAATTCTATGTGATAGAGTTGTTTAAATGCATGCAGTTAGGTTATCAAAGAAATAGTTCTGTAGTTTAAGCATGGGGGACAGTGAAACTGTAGTTGCTCAAACATCTGAAGCCATGGGATATGCATCTGCTGGATATGTTTCGAGTGGCTATGCAGATAGCAGTACAAATGTAATTCCTCATCCTGGTGCTTTTCAATCTGTGATCACTGGAGACTTTTCTGTTTCACGTACCTCTGCAGATATGGGCGATGGTAATGCGTATGTTACGGATCCCAATTCTGTTCAGCAAGGAAATCATGTTGTTGAGGTGGACGAGATGAAGGCAGATGTGGTAGTGACCGACCATAGTCAGAATGCTGCTGTATCAGAAAATTCAGCAATGGAAACGGCACCGTTAGTTGGTCACGATTCTTCTGTTAATGGAAGTGTTGCTACTGAATCAGTCAATGCCTCATCAGTTGAGAATGGAAATGTTGTTGAGAATGCCAACGAGGCTCCTGAAGAACAGCACTTTGTTGATGGTTCTGGTATGTATCTCTGATATTAGTTTTCTGCATTTTCTCGATAATTTCATTTAGCAAAAAGCATTGAACAATTTGGAGGGGGAAATGTAGAAGTCATTGTAAAAGGTGCTGCATTTTGAAGGGCTCACAATGTAGAAGTGTTATGTTTCTGAACTATTAGAGTAATAAATATCCTCGAGAGGCAACAAAGAGTTCTGCATTTTGTTTCATAAAAATATGTCCACCTATTGTTTAAAAACATTAAAAAGTTTATTCAATTATTTTAATTCTAAGCCTCATATCATAATAAAGTTTCCTGGCTAGTTTTCCATCCTCTTTTTTATCTTGAGGCAAGCTGGGGAACTCACACTTTGTTGGACGACTGCTGGAACCCTTCTTATTTTTGCTTTAATTTGGTCCTTCACACAATTTCATTGAAGAATGAAATTACCAAAGAGGGGAGAGAGCCAAAGGAGTTACAAAAGACATCTCCAGTTGGTCTAAAGAGAATCAAAACTATAAGAATGGAATAACTTAGAAAATTTACACCAAGAGATAGCAATGAAGATAACATGCTCTAAAAGAGATCAAAATGTTGGGCTTTGTGGTTGAAATTTAAATTAAAACTATAATTAAAATCAAAATAGGTTTTCTGGTTGTGTTAATTAGGAAAAGGAGAATTCATCTATTAATATTACTATTGTTATTATTTGGATAGTTTTAGGACTCTTTCAATAACGATGAAAGGAGGAGGTATGGCTGAACGTAGTTAGCTGTTTTGACCAAGAAAAAAGTCGATGAAATTATGATTATCGTTTCTCATTAAAAAAAAATCATCCTATGTAAAAAGAAAAATATGAGGCTATCAGAGTTACCTGAAATATGTGTATGTTCCTTGAGAAATATTTACCTATAAAAAAAATCTTACTTAATATGTTTTTGTCTTTATAATTTAGTTTAGCTGTACTTTAGGGTCTAGGACAATATGGGTTCTGACTTACCATGGGTGAACTTTACGTGTTTCTTCTACGACTTGAAAAACCAATAGTTAGGTTTATGTTGCTGCACATCTCTTTTGGTTTTTTGGTTGTCATTAGTATGACTCAAATATATACACGCACAAATACACACACAGACATACATATATGTGTGCATGTATGAGGAAACAAATTTTATTGAAACAACTGCTTTCATTGAGAAAAAATGAAAGAAAACAAGGACAGTATTTCAGTCGTTAGTATGACTTCCTACTTCCACACATATTTTAACCCATTATTGTTGTTTCATTTCATTGCCCTTTTGTTTAATACCGTGGTATGAACATTAGACACAATCCCTATTTCATGTTTCTGCTCTGGGGAAGAACTTTTCTCAGCCTTTATATTTTGTGAAGAAAATATACTGCATATTTAGGTTACACCATTGCTAGGATTCTTTCTATTTCAATACTGTTATCAGTAATCACTTTAGGGTTACTGATAACAGGAACAGTGATTACTTTATTATGTTGCCTATATTTTTTCAGAAATGTAACTCAACTTCTTGTGATATTGTGTTGCCTAATATTTCCCCAACTGTTTTGGCAGTACCTCCACTATCTGCTGAGGAAGATAGACTGTGGAACATTGTGAGGGCCAATTCTTTAGATTTTAATTCATGGACTTCTTTGATTGAAGAGACAGAGAAGGTGGCAGAGGTATGCAAGAATTAATGTTAGCAGGTCGAATGGTTTTATTATTTTATGTTTACACTTGTAAAGAAGTACCAACAATGATGGCTGAATAAATTGGCAGTCTTACCCTCAAATTTCATCAATCACATGGATGCTGCCACAAAGCTTCCGTGATGTAGTCTTTAACATATTTCAAAGTAATGGTCGAGGAAGCAGTGTGAAATTTTTCCATGATGTGCGAAGTTTTGATTCTTGTCTAGGTCATGCATGCTGATATTTAATGTAGATTGTTTTCAGAAAATCACGTGTATGTTAAATATGATTTCCAGTGATCATGGTGGACGTAAGTAACATGGATTTTTTCATCATTAAATGTGCTATATTGTAAATGAATATATTTGCCCAAGAGGCCTGAGAAATATTCAGTGATTTTCTAATACTTTTACATCTGAAGAGTTTTATATGCAAGCAAGATTTCACATTTTATATTGATTCCTTATAATTTGATGCGCTGAAAAACACCTCAATTTAGTTGAGCTCATTTGGGCAACTAATTTTTACTAGAAGTCTGATTCCAATTTAACTGAAATTGCTTGAATTCTTTTCAGGACAACATACTCAAAATCCGGAGAGTTTACGATGCGTTTTTAGCAGAATTTCCTTTATGCTATGGTTATTGGAAGAAGTATGCAGACCATGAGGCACGTTTTGGATCTACCGACAAAGTTGTTGAGGTGTATGAACGAGCAGTACATGGGGTTACTTACTCAGTTGATATTTGGCTACATTACTGCATATTCACGCTTGGTACATATGGAGATCCAGAGACCATCAGAAGGTATAGCCTTCTGTTTCTACTGCATTTGTGCCTTTTCTGGTGTGCCATTACAATTCTTAGTTACTTGGACCTGATAACAATCTTTTTCTTTTTGCTTGTAACCTCGTTTTAGATGGCTGTACCAGTGATTTCCTACGTGTAAGGCGGAAAGATTTGATTGAAATGTATATTGGAATTGCATATTCCATTATGCATTCCCTTGAATTGGGGCTACACCGTTATTTGCCTTTTCTAAAATGTTTTTAATAAAAGAAATAGTGTCAATCTCCTGTCGTCTATTGTAGCTTATGCCTTAGTCTGTAGTTATGAGTGAACTACGGCAGTTGTGTAACCTTGGTCCACTGAGGTGCATCAATATACAAATTGCTGCTGGGAATATCTCGTTCAGTTATGCTCTAAGATGACCTCTGTCATTGCTTCATTCACGGACATAATATGATTTTTAGGAAGGTAAACGCAGCATGCAGAAGGGTTATATGCTATTAGAGTAAATTGTTCCTTCACCCTCAACGTTAGTGCAGTTGCTTTTGTGGATACTTTTGCATCACTTGATGATTTGGTTAACATAATAACCTATTTCCCGGTTGACCATGTTTCAGGCTTTTTGAGAGAGGATTAGCTTATGTTGGGACAGATTACCTCTCCTTTCCACTTTGGGATAAATATATTGAATATGAGTACATGCAGCAGGAATGGGGTCGCCTTGCCATGATATACACACGCATACTGGAAAATCCAAATCAACAGTTGGATCGTTATTTCAATAGGTTAGTATTGCTCACAATATTAGTGTTTGTTCTGATAATTTGATATTTCCCTCGGCCATTTGAAATCTTTTGGTTTTGAACTACGTTAATATAGTTGTTCTTTTGAGTTTTTACTCTTAGATATACTGCTTGTACTTTGCAAGTTAATGTTTTACGCCAGGCTGGGTTATGCACTCTTTCTTTGTCAAATTACATTCTATTTAAGGAAAACCTAATTCTGATTGATGGATACTTTTTAAACTTTTTGTTCTGTGGGATTAATACTGTGCCAATGGCTTGTTAAACTTCTTTCCTTGAAAGGAATCTAAAATGTTTCTTCCCCTTGGATGACTATGCAAATGTGTACAGTTTTAAGGAGTTGGCTGCTAGTCGACCATTGTCAGAATTGAAGAGTTCTGAGGAGGCTGTAGTGGATGTGCAATCAGAGGCTGGTGATCAAGTAAATGGGGAAGAAGGTCATCCTGAAGCTTCAGAACCATCATCTAAAACTGTAAGTGCTGGCTTAACAGAAGCAGAGGAGTTGGAGAAGTATATCGCCATTAGAGAAGAAATCTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGAAGGCCCTACTTTCATGTTCGGCCACTAAATGTTGCAGAGCTTGACAATTGGCATAGTTACCTGGATTTTATAGAGCAAGAAGGAGACTTAAATAAGGTACTTTAGTTTGTTTCAGATTTTAAATGCATATGTCTTCTAGTTTTTAGTCGTCCCTTGTTATGTATTGACTTACAGTTAAAAAATATCTGCTGCATCATATGCTTTACTGGCTAAACCATTGGATGAAGCAACTATTTAATCGGGAATTTGAACTGAGACTAAAGCAGGGGCCTTCAATTTGGTTTCTTTAAGGCTAAGTACTTCAAACTCTCATTTATCAGTGGAGATTCT

mRNA sequence

GCGCAATTACCCTCGCCCAGGCCTCGTTCTCTTTCTCAATATCAAACGAAGGGACCAACTCTCTCACTTCCTCTCCCATTTCCCCTCTCTTTCCCCTTTTCACCCTCAAATTCCTCAATTCCGCCTTGTGTTTTCCTTTCCACCAACTCTTCTTCTTCTTCTCCTTCTCCTTCTTCATCTTCATCTGGTTCCCGGTTATCAAAGAAATAGTTCTGTAGTTTAAGCATGGGGGACAGTGAAACTGTAGTTGCTCAAACATCTGAAGCCATGGGATATGCATCTGCTGGATATGTTTCGAGTGGCTATGCAGATAGCAGTACAAATGTAATTCCTCATCCTGGTGCTTTTCAATCTGTGATCACTGGAGACTTTTCTGTTTCACGTACCTCTGCAGATATGGGCGATGGTAATGCGTATGTTACGGATCCCAATTCTGTTCAGCAAGGAAATCATGTTGTTGAGGTGGACGAGATGAAGGCAGATGTGGTAGTGACCGACCATAGTCAGAATGCTGCTGTATCAGAAAATTCAGCAATGGAAACGGCACCGTTAGTTGGTCACGATTCTTCTGTTAATGGAAGTGTTGCTACTGAATCAGTCAATGCCTCATCAGTTGAGAATGGAAATGTTGTTGAGAATGCCAACGAGGCTCCTGAAGAACAGCACTTTGTTGATGGTTCTGTACCTCCACTATCTGCTGAGGAAGATAGACTGTGGAACATTGTGAGGGCCAATTCTTTAGATTTTAATTCATGGACTTCTTTGATTGAAGAGACAGAGAAGGTGGCAGAGGACAACATACTCAAAATCCGGAGAGTTTACGATGCGTTTTTAGCAGAATTTCCTTTATGCTATGGTTATTGGAAGAAGTATGCAGACCATGAGGCACGTTTTGGATCTACCGACAAAGTTGTTGAGGTGTATGAACGAGCAGTACATGGGGTTACTTACTCAGTTGATATTTGGCTACATTACTGCATATTCACGCTTGGTACATATGGAGATCCAGAGACCATCAGAAGGCTTTTTGAGAGAGGATTAGCTTATGTTGGGACAGATTACCTCTCCTTTCCACTTTGGGATAAATATATTGAATATGAGTACATGCAGCAGGAATGGGGTCGCCTTGCCATGATATACACACGCATACTGGAAAATCCAAATCAACAGTTGGATCGTTATTTCAATAGTTTTAAGGAGTTGGCTGCTAGTCGACCATTGTCAGAATTGAAGAGTTCTGAGGAGGCTGTAGTGGATGTGCAATCAGAGGCTGGTGATCAAGTAAATGGGGAAGAAGGTCATCCTGAAGCTTCAGAACCATCATCTAAAACTGTAACTATCAGAAGGCCCTACTTTCATGTTCGGCCACTAAATGTTGCAGAGCTTGACAATTGGCATAGTTACCTGGATTTTATAGAGCAAGAAGGAGACTTAAATAAGCAACTATTTAATCGGGAATTTGAACTGAGACTAAAGCAGGGGCCTTCAATTTGGTTTCTTTAAGGCTAAGTACTTCAAACTCTCATTTATCAGTGGAGATTCT

Coding sequence (CDS)

ATGGGGGACAGTGAAACTGTAGTTGCTCAAACATCTGAAGCCATGGGATATGCATCTGCTGGATATGTTTCGAGTGGCTATGCAGATAGCAGTACAAATGTAATTCCTCATCCTGGTGCTTTTCAATCTGTGATCACTGGAGACTTTTCTGTTTCACGTACCTCTGCAGATATGGGCGATGGTAATGCGTATGTTACGGATCCCAATTCTGTTCAGCAAGGAAATCATGTTGTTGAGGTGGACGAGATGAAGGCAGATGTGGTAGTGACCGACCATAGTCAGAATGCTGCTGTATCAGAAAATTCAGCAATGGAAACGGCACCGTTAGTTGGTCACGATTCTTCTGTTAATGGAAGTGTTGCTACTGAATCAGTCAATGCCTCATCAGTTGAGAATGGAAATGTTGTTGAGAATGCCAACGAGGCTCCTGAAGAACAGCACTTTGTTGATGGTTCTGTACCTCCACTATCTGCTGAGGAAGATAGACTGTGGAACATTGTGAGGGCCAATTCTTTAGATTTTAATTCATGGACTTCTTTGATTGAAGAGACAGAGAAGGTGGCAGAGGACAACATACTCAAAATCCGGAGAGTTTACGATGCGTTTTTAGCAGAATTTCCTTTATGCTATGGTTATTGGAAGAAGTATGCAGACCATGAGGCACGTTTTGGATCTACCGACAAAGTTGTTGAGGTGTATGAACGAGCAGTACATGGGGTTACTTACTCAGTTGATATTTGGCTACATTACTGCATATTCACGCTTGGTACATATGGAGATCCAGAGACCATCAGAAGGCTTTTTGAGAGAGGATTAGCTTATGTTGGGACAGATTACCTCTCCTTTCCACTTTGGGATAAATATATTGAATATGAGTACATGCAGCAGGAATGGGGTCGCCTTGCCATGATATACACACGCATACTGGAAAATCCAAATCAACAGTTGGATCGTTATTTCAATAGTTTTAAGGAGTTGGCTGCTAGTCGACCATTGTCAGAATTGAAGAGTTCTGAGGAGGCTGTAGTGGATGTGCAATCAGAGGCTGGTGATCAAGTAAATGGGGAAGAAGGTCATCCTGAAGCTTCAGAACCATCATCTAAAACTGTAACTATCAGAAGGCCCTACTTTCATGTTCGGCCACTAAATGTTGCAGAGCTTGACAATTGGCATAGTTACCTGGATTTTATAGAGCAAGAAGGAGACTTAAATAAGCAACTATTTAATCGGGAATTTGAACTGAGACTAAAGCAGGGGCCTTCAATTTGGTTTCTTTAA

Protein sequence

MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGDGNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSVATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHPEASEPSSKTVTIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKQLFNREFELRLKQGPSIWFL
Homology
[Close]
BLAST of Cmc11g0312961 vs. NCBI nr
Match: KAA0039889.1 (pre-mRNA-processing factor 39 isoform X2 [Cucumis melo var. makuwa] >TYK24613.1 pre-mRNA-processing factor 39 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 786.6 bits (2030), Expect = 1.1e-223
Identity = 404/441 (91.61%), Postives = 405/441 (91.84%), Query Frame = 0 

Query: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60
           MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD
Sbjct: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60

Query: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120
           GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV
Sbjct: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120

Query: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180
           ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL
Sbjct: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180

Query: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240
           IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240

Query: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300
           TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300

Query: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360
           LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360

Query: 361 EASEPSSKTVT------------------------------------IRRPYFHVRPLNV 406
           EASEPSSKTV+                                    IRRPYFHVRPLNV
Sbjct: 361 EASEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420

[Close]
BLAST of Cmc11g0312961 vs. NCBI nr
Match: XP_008459959.1 (PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Cucumis melo])

HSP 1 Score: 786.6 bits (2030), Expect = 1.1e-223
Identity = 404/441 (91.61%), Postives = 405/441 (91.84%), Query Frame = 0 

Query: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60
           MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD
Sbjct: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60

Query: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120
           GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV
Sbjct: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120

Query: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180
           ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL
Sbjct: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180

Query: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240
           IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240

Query: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300
           TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300

Query: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360
           LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360

Query: 361 EASEPSSKTVT------------------------------------IRRPYFHVRPLNV 406
           EASEPSSKTV+                                    IRRPYFHVRPLNV
Sbjct: 361 EASEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420

[Close]
BLAST of Cmc11g0312961 vs. NCBI nr
Match: XP_016902502.1 (PREDICTED: pre-mRNA-processing factor 39 isoform X3 [Cucumis melo])

HSP 1 Score: 786.6 bits (2030), Expect = 1.1e-223
Identity = 404/441 (91.61%), Postives = 405/441 (91.84%), Query Frame = 0 

Query: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60
           MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD
Sbjct: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60

Query: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120
           GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV
Sbjct: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120

Query: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180
           ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL
Sbjct: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180

Query: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240
           IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240

Query: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300
           TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300

Query: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360
           LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360

Query: 361 EASEPSSKTVT------------------------------------IRRPYFHVRPLNV 406
           EASEPSSKTV+                                    IRRPYFHVRPLNV
Sbjct: 361 EASEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420

[Close]
BLAST of Cmc11g0312961 vs. NCBI nr
Match: XP_008459958.1 (PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Cucumis melo])

HSP 1 Score: 786.6 bits (2030), Expect = 1.1e-223
Identity = 404/441 (91.61%), Postives = 405/441 (91.84%), Query Frame = 0 

Query: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60
           MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD
Sbjct: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60

Query: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120
           GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV
Sbjct: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120

Query: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180
           ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL
Sbjct: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180

Query: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240
           IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240

Query: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300
           TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300

Query: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360
           LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360

Query: 361 EASEPSSKTVT------------------------------------IRRPYFHVRPLNV 406
           EASEPSSKTV+                                    IRRPYFHVRPLNV
Sbjct: 361 EASEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420

[Close]
BLAST of Cmc11g0312961 vs. NCBI nr
Match: XP_011656771.1 (pre-mRNA-processing factor 39 isoform X2 [Cucumis sativus])

HSP 1 Score: 761.9 bits (1966), Expect = 2.9e-216
Identity = 391/441 (88.66%), Postives = 396/441 (89.80%), Query Frame = 0 

Query: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60
           MGDSETVVAQTSEAMGYASAGYVSSGYADSSTN+IPHPGAFQSVITGDFSVS TSADMGD
Sbjct: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNLIPHPGAFQSVITGDFSVSHTSADMGD 60

Query: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120
           GNAY TDPNSVQQGNHVVEVDE KADV VTDHSQNAAVSE SAMETA  VGHDSSVNGS+
Sbjct: 61  GNAYATDPNSVQQGNHVVEVDETKADVAVTDHSQNAAVSEISAMETAASVGHDSSVNGSI 120

Query: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180
           ATESV+ASSVENG VVENANE PEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL
Sbjct: 121 ATESVHASSVENGTVVENANEGPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180

Query: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240
           IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240

Query: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300
           TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300

Query: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360
           LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360

Query: 361 EASEPSSKTVT------------------------------------IRRPYFHVRPLNV 406
           EA+EPSSKTV+                                    IRRPYFHVRPLNV
Sbjct: 361 EAAEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420

[Close]
BLAST of Cmc11g0312961 vs. ExPASy Swiss-Prot
Match: O74970 (Pre-mRNA-processing factor 39 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp39 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.4e-40
Identity = 93/288 (32.29%), Postives = 138/288 (47.92%), Query Frame = 0 

Query: 159 EEDRLWNIVRANSLDFNSWTSLIEETEKV--------AEDNILKIRRVYDAFLAEFPLCY 218
           E D+    +  N  DF++W  L+  +E +        ++  I  +R VYD FL ++PL +
Sbjct: 13  EWDKYNRQINKNPDDFDAWEGLVRASEHLEGGVGRNSSKQAINTLRSVYDRFLGKYPLLF 72

Query: 219 GYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLGTYGDPETIRRLFER 278
           GYWKKYAD E      +    +YER + G+ +SVD+W +YC F + T GD   +R LF +
Sbjct: 73  GYWKKYADFEFFVAGAEASEHIYERGIAGIPHSVDLWTNYCAFKMETNGDANEVRELFMQ 132

Query: 279 GLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAASR 338
           G   VG D+LS P WDKY+E+E  Q+    +  +  R++  P  Q  RYF  F +++ S+
Sbjct: 133 GANMVGLDFLSHPFWDKYLEFEERQERPDNVFQLLERLIHIPLHQYARYFERFVQVSQSQ 192

Query: 339 PLSELKSSE----------EAVVDVQSEAGDQVNGEEGHPEASEPSSKTV---------- 398
           P+ +L   +               V S    Q+  E G  E        +          
Sbjct: 193 PIQQLLPPDVLASIRADVTREPAKVVSAGSKQITVERGELEIEREMRARIYNIHLQIFQK 252

Query: 399 -------------TIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNK 406
                         I+RPYFHV+ L+ A+L NW  YLDF E EGD  +
Sbjct: 253 VQLETAKRWTFESEIKRPYFHVKELDEAQLVNWRKYLDFEEVEGDFQR 300

[Close]
BLAST of Cmc11g0312961 vs. ExPASy Swiss-Prot
Match: Q4KLU2 (Pre-mRNA-processing factor 39 OS=Xenopus laevis OX=8355 GN=prpf39 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.3e-38
Identity = 98/298 (32.89%), Postives = 145/298 (48.66%), Query Frame = 0 

Query: 153 VPPLSAEEDRLWNIVRANSLDFNSWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGY 212
           +PPL  + ++ W  V+A   DFN+WT L++  E+  E+++   R+ +DAFLA +P CYGY
Sbjct: 49  LPPLPPDFEKYWKSVQAYPEDFNTWTYLLQYVEQ--ENHLFAARKAFDAFLAHYPYCYGY 108

Query: 213 WKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLGTY--GDPE---TIRRL 272
           WKKYAD E +  +  +  EVY R +  +T SVD+W+HY  F   T    DPE   T+R  
Sbjct: 109 WKKYADLEKKNNNILEADEVYRRGIQAITLSVDLWMHYLNFLKETLDPADPETSLTLRGT 168

Query: 273 FERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSFKELA 332
           FE  +   G D+ S  LW+ YI +E  Q     +  IY+R+L  P Q    +F  FKE  
Sbjct: 169 FEHAVVSAGLDFRSDKLWEMYINWETEQGNLSGVTSIYSRLLGIPTQFYSLHFQRFKEHI 228

Query: 333 ASRPLSELKSSEEAV------VDVQSEAGDQVNGEEGHPEASEPSSKTV----------- 392
                 E  +SE+ +        +    G   +   G  E  +P+ +T            
Sbjct: 229 QGHLPREFLTSEKFIELRKELASMTLHGGTNDDIPSGLEEIKDPAKRTTEVENMRHRIIE 288

Query: 393 ---------------------TIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKQL 408
                                 I+RPYFHV+PL  A+L+NW  YL+F E E   N+++
Sbjct: 289 VHQEIFNLNEHEVSKIWNFEEEIKRPYFHVKPLEKAQLNNWKEYLEF-ELENGSNERI 343

[Close]
BLAST of Cmc11g0312961 vs. ExPASy Swiss-Prot
Match: Q86UA1 (Pre-mRNA-processing factor 39 OS=Homo sapiens OX=9606 GN=PRPF39 PE=1 SV=3)

HSP 1 Score: 147.9 bits (372), Expect = 2.6e-34
Identity = 113/365 (30.96%), Postives = 163/365 (44.66%), Query Frame = 0 

Query: 88  VVTDHSQ--NAAVSENSAMETAPLVGHDSSVNGSVATESVNASSVENGNVVENANEAPEE 147
           VV +H    +  +   + ME +P    D S N + +TE    +S  +  V     EA   
Sbjct: 23  VVVEHPTDFSTEIMNVTEMEQSP----DDSPNVNASTEETEMASAVDLPVTLTETEA--- 82

Query: 148 QHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSLIEETEKVAEDNILKIRRVYDAFLAE 207
                 + PP   E ++ W  V  N  DF  W  L++  E+  E++++  R+ +D F   
Sbjct: 83  ------NFPP---EYEKFWKTVENNPQDFTGWVYLLQYVEQ--ENHLMAARKAFDRFFIH 142

Query: 208 FPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLGTY--GDPE- 267
           +P CYGYWKKYAD E R  +     EVY R +  +  SVD+W+HY  F   T   GDPE 
Sbjct: 143 YPYCYGYWKKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDPET 202

Query: 268 --TIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYF 327
             TIR  FE  +   GTD+ S  LW+ YI +E  Q     +  IY RIL  P Q    +F
Sbjct: 203 NNTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSHHF 262

Query: 328 NSFKELAASRPLSELKSSEEAVV---DVQSEAGDQVNGEEGHPEASEPS--------SKT 387
             FKE   +    +L + E+ +    ++ S  G   +G++G P    PS        +K 
Sbjct: 263 QRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGH--SGDDGPPGDDLPSGIEDITDPAKL 322

Query: 388 VT---------------------------------IRRPYFHVRPLNVAELDNWHSYLDF 402
           +T                                 I+RPYFHV+PL  A+L NW  YL+F
Sbjct: 323 ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEF 367

[Close]
BLAST of Cmc11g0312961 vs. ExPASy Swiss-Prot
Match: Q1JPZ7 (Pre-mRNA-processing factor 39 OS=Danio rerio OX=7955 GN=prpf39 PE=2 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 9.9e-34
Identity = 101/330 (30.61%), Postives = 147/330 (44.55%), Query Frame = 0 

Query: 123 ESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSLIE 182
           +S + S++E  +  +   E   E        P L  E +RL  +V  N  DFN W  L++
Sbjct: 115 DSESPSNMELEDAPKEPAEPAAEADPAAPQEPELPTEYERLSKVVEDNPEDFNGWVYLLQ 174

Query: 183 ETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTY 242
             E+  E+++L  R+ +DAF   +P CYGYWKKYAD E + G      EVY R +  +  
Sbjct: 175 YVEQ--ENHLLGSRKAFDAFFLHYPYCYGYWKKYADIERKHGYIQMADEVYRRGLQAIPL 234

Query: 243 SVDIWLHYCIFTLGTY----GDPET-IRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQE 302
           SVD+WLHY  F         G+ E+ IR  +E  +   GTD+ S  LW+ YI +E  Q +
Sbjct: 235 SVDLWLHYITFLRENQDTSDGEAESRIRASYEHAVLACGTDFRSDRLWEAYIAWETEQGK 294

Query: 303 WGRLAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAV------VDVQSEAGD 362
              +  IY R+L  P Q   ++F  FK+   S       S EE V       +    +GD
Sbjct: 295 LANVTAIYDRLLCIPTQLYSQHFQKFKDHVQSNNPKHFLSEEEFVSLRVELANANKPSGD 354

Query: 363 -----QVNGEE---GHPEASEPSSKTVT-------------------------------- 402
                +  GEE   G  +  +P+ +                                   
Sbjct: 355 EDAETEAPGEELPPGTEDLPDPAKRVTEIENMRHKVIETRQEMFNHNEHEVSKRWAFEEG 414

[Close]
BLAST of Cmc11g0312961 vs. ExPASy Swiss-Prot
Match: Q8K2Z2 (Pre-mRNA-processing factor 39 OS=Mus musculus OX=10090 GN=Prpf39 PE=1 SV=3)

HSP 1 Score: 142.1 bits (357), Expect = 1.4e-32
Identity = 115/378 (30.42%), Postives = 168/378 (44.44%), Query Frame = 0 

Query: 73  QGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSVATESVNASSVEN 132
           Q +H+ E     +D   T +S   AV E+    T  ++          A+ S +AS+ EN
Sbjct: 2   QNSHMEEY--RNSDNGSTGNSSEVAVVEHPDFST-EIMNVTEMEQSPDASPSAHASTEEN 61

Query: 133 GNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSLIEETEKVAEDNI 192
               E AN         +G  PP   E ++ W  V  N  DF  W  L++  E+  E+++
Sbjct: 62  ----EMANAVNLPVTEAEGDFPP---EFEKFWKTVEMNPQDFTGWVYLLQYVEQ--ENHL 121

Query: 193 LKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCI 252
           +  R+ +D F   +P CYGYWKKYAD E R  +  +  EVY R +  +  SVD+W+HY  
Sbjct: 122 MAARKAFDKFFVHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYIN 181

Query: 253 FTLGTY--GDPE---TIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTR 312
           F   T   GD E   TIR  FE  +   GTD+ S  LW+ YI +E  Q     +  +Y R
Sbjct: 182 FLKETLEPGDQETNTTIRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDR 241

Query: 313 ILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVV---DVQSEAGDQVNGEEGHPEASE 372
           IL  P Q    +F  FKE   +    +L + E+ +    ++ S  G   +G++G P    
Sbjct: 242 ILGIPTQLYSHHFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGH--SGDDGPPGDDL 301

Query: 373 PS-------SKTVT---------------------------------IRRPYFHVRPLNV 402
           PS       +K +T                                 I+RPYFHV+PL  
Sbjct: 302 PSGIEDISPAKLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEK 361

[Close]
BLAST of Cmc11g0312961 vs. ExPASy TrEMBL
Match: A0A5A7TF58 (Pre-mRNA-processing factor 39 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001600 PE=4 SV=1)

HSP 1 Score: 786.6 bits (2030), Expect = 5.3e-224
Identity = 404/441 (91.61%), Postives = 405/441 (91.84%), Query Frame = 0 

Query: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60
           MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD
Sbjct: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60

Query: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120
           GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV
Sbjct: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120

Query: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180
           ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL
Sbjct: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180

Query: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240
           IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240

Query: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300
           TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300

Query: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360
           LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360

Query: 361 EASEPSSKTVT------------------------------------IRRPYFHVRPLNV 406
           EASEPSSKTV+                                    IRRPYFHVRPLNV
Sbjct: 361 EASEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420

[Close]
BLAST of Cmc11g0312961 vs. ExPASy TrEMBL
Match: A0A1S3CBE2 (pre-mRNA-processing factor 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498921 PE=4 SV=1)

HSP 1 Score: 786.6 bits (2030), Expect = 5.3e-224
Identity = 404/441 (91.61%), Postives = 405/441 (91.84%), Query Frame = 0 

Query: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60
           MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD
Sbjct: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60

Query: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120
           GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV
Sbjct: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120

Query: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180
           ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL
Sbjct: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180

Query: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240
           IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240

Query: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300
           TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300

Query: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360
           LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360

Query: 361 EASEPSSKTVT------------------------------------IRRPYFHVRPLNV 406
           EASEPSSKTV+                                    IRRPYFHVRPLNV
Sbjct: 361 EASEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420

[Close]
BLAST of Cmc11g0312961 vs. ExPASy TrEMBL
Match: A0A1S4E2P8 (pre-mRNA-processing factor 39 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498921 PE=4 SV=1)

HSP 1 Score: 786.6 bits (2030), Expect = 5.3e-224
Identity = 404/441 (91.61%), Postives = 405/441 (91.84%), Query Frame = 0 

Query: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60
           MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD
Sbjct: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60

Query: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120
           GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV
Sbjct: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120

Query: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180
           ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL
Sbjct: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180

Query: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240
           IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240

Query: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300
           TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300

Query: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360
           LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360

Query: 361 EASEPSSKTVT------------------------------------IRRPYFHVRPLNV 406
           EASEPSSKTV+                                    IRRPYFHVRPLNV
Sbjct: 361 EASEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420

[Close]
BLAST of Cmc11g0312961 vs. ExPASy TrEMBL
Match: A0A1S3CBV2 (pre-mRNA-processing factor 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498921 PE=4 SV=1)

HSP 1 Score: 786.6 bits (2030), Expect = 5.3e-224
Identity = 404/441 (91.61%), Postives = 405/441 (91.84%), Query Frame = 0 

Query: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60
           MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD
Sbjct: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60

Query: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120
           GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV
Sbjct: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120

Query: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180
           ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL
Sbjct: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180

Query: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240
           IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240

Query: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300
           TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300

Query: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360
           LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360

Query: 361 EASEPSSKTVT------------------------------------IRRPYFHVRPLNV 406
           EASEPSSKTV+                                    IRRPYFHVRPLNV
Sbjct: 361 EASEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420

[Close]
BLAST of Cmc11g0312961 vs. ExPASy TrEMBL
Match: A0A0A0KF31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088040 PE=4 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 1.4e-216
Identity = 391/441 (88.66%), Postives = 396/441 (89.80%), Query Frame = 0 

Query: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60
           MGDSETVVAQTSEAMGYASAGYVSSGYADSSTN+IPHPGAFQSVITGDFSVS TSADMGD
Sbjct: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNLIPHPGAFQSVITGDFSVSHTSADMGD 60

Query: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120
           GNAY TDPNSVQQGNHVVEVDE KADV VTDHSQNAAVSE SAMETA  VGHDSSVNGS+
Sbjct: 61  GNAYATDPNSVQQGNHVVEVDETKADVAVTDHSQNAAVSEISAMETAASVGHDSSVNGSI 120

Query: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180
           ATESV+ASSVENG VVENANE PEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL
Sbjct: 121 ATESVHASSVENGTVVENANEGPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180

Query: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240
           IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240

Query: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300
           TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300

Query: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360
           LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360

Query: 361 EASEPSSKTVT------------------------------------IRRPYFHVRPLNV 406
           EA+EPSSKTV+                                    IRRPYFHVRPLNV
Sbjct: 361 EAAEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420

[Close]
BLAST of Cmc11g0312961 vs. TAIR 10
Match: AT1G04080.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 394.4 bits (1012), Expect = 1.1e-109
Identity = 213/381 (55.91%), Postives = 254/381 (66.67%), Query Frame = 0 

Query: 74  GNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSVATESVNASSVENG 133
           G+    V E        D++ +AA  E++  ETAP+V    SVN          + VENG
Sbjct: 2   GDSEAMVSEGYTSAPYGDYNASAATVESTGQETAPIVDASHSVNNDSLVN--GTAPVENG 61

Query: 134 NVVEN-ANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSLIEETEKVAEDNI 193
           +  +N A  AP  +H  D +   LS EE+RLWNIVRANSL+FN+WT+LI+ETE++A+DNI
Sbjct: 62  SATDNVAVTAPAAEH-GDNTGSTLSTEEERLWNIVRANSLEFNAWTALIDETERIAQDNI 121

Query: 194 LKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCI 253
            KIR+VYDAFLAEFPLCYGYWKK+ADHEAR G+ DKVVEVYERAV GVTYSVDIWLHYC 
Sbjct: 122 AKIRKVYDAFLAEFPLCYGYWKKFADHEARVGAMDKVVEVYERAVLGVTYSVDIWLHYCT 181

Query: 254 FTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENP 313
           F + TYGDPETIRRLFER L YVGTD+LS PLWDKYIEYEYMQQ+W R+A+IYTRILENP
Sbjct: 182 FAINTYGDPETIRRLFERALVYVGTDFLSSPLWDKYIEYEYMQQDWSRVALIYTRILENP 241

Query: 314 NQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGD------------------QVN 373
            Q LDRYF+SFKELA +RPLSEL+S+EE+     + AGD                  QV+
Sbjct: 242 IQNLDRYFSSFKELAETRPLSELRSAEESAAAAVAVAGDASESAASESGEKADEGRSQVD 301

Query: 374 GEEGHPEASEPSSKT------------------------------VTIRRPYFHVRPLNV 406
           G        E +S T                              + IRRPYFHVRPLNV
Sbjct: 302 GSTEQSPKLESASSTEPEELKKYVGIREAMYIKSKEFESKIIGYEMAIRRPYFHVRPLNV 361

[Close]
BLAST of Cmc11g0312961 vs. TAIR 10
Match: AT1G04080.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 394.4 bits (1012), Expect = 1.1e-109
Identity = 213/381 (55.91%), Postives = 254/381 (66.67%), Query Frame = 0 

Query: 74  GNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSVATESVNASSVENG 133
           G+    V E        D++ +AA  E++  ETAP+V    SVN          + VENG
Sbjct: 2   GDSEAMVSEGYTSAPYGDYNASAATVESTGQETAPIVDASHSVNNDSLVN--GTAPVENG 61

Query: 134 NVVEN-ANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSLIEETEKVAEDNI 193
           +  +N A  AP  +H  D +   LS EE+RLWNIVRANSL+FN+WT+LI+ETE++A+DNI
Sbjct: 62  SATDNVAVTAPAAEH-GDNTGSTLSTEEERLWNIVRANSLEFNAWTALIDETERIAQDNI 121

Query: 194 LKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCI 253
            KIR+VYDAFLAEFPLCYGYWKK+ADHEAR G+ DKVVEVYERAV GVTYSVDIWLHYC 
Sbjct: 122 AKIRKVYDAFLAEFPLCYGYWKKFADHEARVGAMDKVVEVYERAVLGVTYSVDIWLHYCT 181

Query: 254 FTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENP 313
           F + TYGDPETIRRLFER L YVGTD+LS PLWDKYIEYEYMQQ+W R+A+IYTRILENP
Sbjct: 182 FAINTYGDPETIRRLFERALVYVGTDFLSSPLWDKYIEYEYMQQDWSRVALIYTRILENP 241

Query: 314 NQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGD------------------QVN 373
            Q LDRYF+SFKELA +RPLSEL+S+EE+     + AGD                  QV+
Sbjct: 242 IQNLDRYFSSFKELAETRPLSELRSAEESAAAAVAVAGDASESAASESGEKADEGRSQVD 301

Query: 374 GEEGHPEASEPSSKT------------------------------VTIRRPYFHVRPLNV 406
           G        E +S T                              + IRRPYFHVRPLNV
Sbjct: 302 GSTEQSPKLESASSTEPEELKKYVGIREAMYIKSKEFESKIIGYEMAIRRPYFHVRPLNV 361

[Close]
BLAST of Cmc11g0312961 vs. TAIR 10
Match: AT5G46400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 214.2 bits (544), Expect = 2.1e-55
Identity = 116/286 (40.56%), Postives = 162/286 (56.64%), Query Frame = 0 

Query: 159 EEDRLWNIVRANSLDFNSWTSLIEETEKVA-EDNILKIRRVYDAFLAEFPLCYGYWKKYA 218
           + DRL     + +LDF+ WT LI E E  +  D+I K+  VYDAFL EFPLC+GYW+KYA
Sbjct: 30  DNDRLKETFSSGALDFDEWTLLISEIETTSFPDDIEKLCLVYDAFLLEFPLCHGYWRKYA 89

Query: 219 DHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGT 278
            H+ +  + +  VEV+ERAV   TYSV +WL YC F +  Y DP  + RLFERGL+++G 
Sbjct: 90  YHKIKLCTLEDAVEVFERAVQAATYSVAVWLDYCAFAVAAYEDPHDVSRLFERGLSFIGK 149

Query: 279 DYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAA--------- 338
           DY    LWDKYIEY   QQ+W  LA +Y R L+ P+++LD Y+ +F+++AA         
Sbjct: 150 DYSCCTLWDKYIEYLLGQQQWSSLANVYLRTLKYPSKKLDLYYKNFRKIAASLKEKIKCR 209

Query: 339 --------SRPLSE-----LKSSEEAVVDVQSEAGDQVN-------------GEEGHPEA 398
                   S P+ E       + EE  + V+   G   +             GE+ + ++
Sbjct: 210 IDVNGDLSSDPMEEDLVHTRHTDEEISIVVRELMGPSSSSAVSKALHTYLSIGEQFYQDS 269

Query: 399 SEPSSK----TVTIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLN 405
            +   K       IRRPYFHV+PL+  +LDNWH+YL F E  GD +
Sbjct: 270 RQLMEKISCFETQIRRPYFHVKPLDTNQLDNWHAYLSFGETYGDFD 315

[Close]
BLAST of Cmc11g0312961 vs. TAIR 10
Match: AT1G04080.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 179.5 bits (454), Expect = 5.7e-45
Identity = 98/188 (52.13%), Postives = 115/188 (61.17%), Query Frame = 0 

Query: 266 RLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSFKE 325
           RLFER L YVGTD+LS PLWDKYIEYEYMQQ+W R+A+IYTRILENP Q LDRYF+SFKE
Sbjct: 6   RLFERALVYVGTDFLSSPLWDKYIEYEYMQQDWSRVALIYTRILENPIQNLDRYFSSFKE 65

Query: 326 LAASRPLSELKSSEEAVVDVQSEAGD------------------QVNGEEGHPEASEPSS 385
           LA +RPLSEL+S+EE+     + AGD                  QV+G        E +S
Sbjct: 66  LAETRPLSELRSAEESAAAAVAVAGDASESAASESGEKADEGRSQVDGSTEQSPKLESAS 125

Query: 386 KT------------------------------VTIRRPYFHVRPLNVAELDNWHSYLDFI 406
            T                              + IRRPYFHVRPLNVAEL+NWH+YLDFI
Sbjct: 126 STEPEELKKYVGIREAMYIKSKEFESKIIGYEMAIRRPYFHVRPLNVAELENWHNYLDFI 185

[Close]
BLAST of Cmc11g0312961 vs. TAIR 10
Match: AT1G17760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 2.1e-07
Identity = 33/122 (27.05%), Postives = 57/122 (46.72%), Query Frame = 0 

Query: 180 LIEETEKVAE----DNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYER 239
           ++EE E +A+      I +   +Y+  L+ +P    +WK+Y + +    + D   +++ R
Sbjct: 6   IVEEAEALAKRALHSPIAQATPIYEQLLSLYPTSARFWKQYVEAQMAVNNDDATKQIFSR 65

Query: 240 AVHGVTYSVDIWLHYCIFTLGTY------GDPETIRRLFERGLAYVGTDYLSFPLWDKYI 292
            +      V +W  Y  F    Y      G  ET  + FE  L Y+GTD  S P+W +YI
Sbjct: 66  CLL-TCLQVPLWQCYIRFIRKVYDKKGAEGQEET-TKAFEFMLNYIGTDIASGPIWTEYI 125

The following BLAST results are available for this feature:
BLAST of Cmc11g0312961 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0039889.11.1e-22391.61pre-mRNA-processing factor 39 isoform X2 [Cucumis melo var. makuwa] >TYK24613.1 ... [more]
XP_008459959.11.1e-22391.61PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Cucumis melo][more]
XP_016902502.11.1e-22391.61PREDICTED: pre-mRNA-processing factor 39 isoform X3 [Cucumis melo][more]
XP_008459958.11.1e-22391.61PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Cucumis melo][more]
XP_011656771.12.9e-21688.66pre-mRNA-processing factor 39 isoform X2 [Cucumis sativus][more]
BLAST of Cmc11g0312961 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O749702.4e-4032.29Pre-mRNA-processing factor 39 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
Q4KLU21.3e-3832.89Pre-mRNA-processing factor 39 OS=Xenopus laevis OX=8355 GN=prpf39 PE=2 SV=1[more]
Q86UA12.6e-3430.96Pre-mRNA-processing factor 39 OS=Homo sapiens OX=9606 GN=PRPF39 PE=1 SV=3[more]
Q1JPZ79.9e-3430.61Pre-mRNA-processing factor 39 OS=Danio rerio OX=7955 GN=prpf39 PE=2 SV=2[more]
Q8K2Z21.4e-3230.42Pre-mRNA-processing factor 39 OS=Mus musculus OX=10090 GN=Prpf39 PE=1 SV=3[more]
BLAST of Cmc11g0312961 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TF585.3e-22491.61Pre-mRNA-processing factor 39 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3CBE25.3e-22491.61pre-mRNA-processing factor 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498921... [more]
A0A1S4E2P85.3e-22491.61pre-mRNA-processing factor 39 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498921... [more]
A0A1S3CBV25.3e-22491.61pre-mRNA-processing factor 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498921... [more]
A0A0A0KF311.4e-21688.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088040 PE=4 SV=1[more]
BLAST of Cmc11g0312961 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G04080.11.1e-10955.91Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G04080.31.1e-10955.91Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G46400.12.1e-5540.56Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G04080.25.7e-4552.13Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G17760.12.1e-0727.05Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 224..256
e-value: 0.5
score: 19.4
coord: 190..222
e-value: 8.7E-4
score: 28.6
coord: 259..294
e-value: 2.4E-6
score: 37.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 165..334
e-value: 5.9E-42
score: 145.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 167..404
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..369
NoneNo IPR availablePANTHERPTHR17204:SF5PRE-MRNA-PROCESSING FACTOR 39coord: 3..410
NoneNo IPR availablePANTHERPTHR17204PRE-MRNA PROCESSING PROTEIN PRP39-RELATEDcoord: 3..410

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0312961.1Cmc11g0312961.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006396 RNA processing
molecular_function GO:0005515 protein binding