Cmc11g0312141 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0312141
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionFcf2 domain-containing protein
LocationCMiso1.1chr11: 31958896 .. 31962812 (+)
RNA-Seq ExpressionCmc11g0312141
SyntenyCmc11g0312141
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTTAATCAAATTTTAATATTAATGTAAGTTGAGGGTCAATTTTTGCGATTAGTAAAAAAGAAAAAAATTGACCTCTAAGAAACCCTCGTGAACCCAGGCAGCCCTCTCGCGCCAACCCTCATTCACTCGCCGTCTCCTCCTCAATCTTCTTCAATCTCCCGATCTTGCACTACGCAAGACAGCTTAATCCCTAGGTTTCGTGGGTCTGCCGTGTGTTCATTGTCGACGTCGTGGAATTTTTTTAAAATACTTTGATGTCGGAAAGAAAGCCCATAATTGGTCTCTCTTGGGAGCCAAAGCTGCCAGCCTCCTCATCGGGAATCAAAACTAAAACCTGCGACAAATCTAATAATCAAGCAGAAAACGGTATTGTTTGGAAAAGCAATTCAGAGCTTGTAGATGGGTTATTTGTTCCACCAAACAACCCAAAAAAGTTGAATAAGTTATTGAGAAAGCAAGTCAGTGACACGGCTGGGAGGAATTGGTACATGCTCTCTTCTCTATAAATTTCGGCAGTTTTACTATTGATTCCTGAAAAAAAAAACCAAACTAAGGTTTTTTTCTAATTTTTTTTAATGCTGATTAACCATAGTAGTTGATGTTCTAAATTCTGATACCTATACGCTTGTCACTGTAACTAGGTTTGACATGCCAGCAAAAACCATGACCCCTGAAGTGGAAAAAGATTTGCGCCTGTTGAAGGTGAGACTGTCTCTGATGTACTATCCATTTCACTTTTGATCAGTTTTCTACCCTCACATGTAGCAAGCTGGTAATTTTGACCACGTATCAAATGTTTTCTTCTAGTTCTTTTTTTCATTACGTACCAGACTATTTTTCTTCTTGGAATTCATTTGCTTTTCTTTGGAAGGTGAAACTCCTAAATAATGTGAAGTTTTTTGTCTCCCAAGTTATCCATGGAGAATCAATACCTTAGATAAGCTCTTTAGGAAAACGCCTATATTAACACATAGTTAAAGAAGTTGTAAGGGTATTTGGTTATAAATGTGAGAGGTGAAGAAGGGGAAAGTTAGACATGATGTTGATGAGTGAATTGGAGCTTTAGATCTCAAGGGGGAAGGAGGGCCCAAGTACTTTGAATTACTTGTCTATCCTGTAAGCTTTCAAGTTTCATCCTTTACATTAACATTCTAATATAGTTTGATCTTGTAGTGCTTCCTACCAAATTATTATAGAGCTTTTTTCGGTTCTGGCCATGAAGTTTGAGTGAACTATACTGAAGAGTGTTTGTGAAAGGTTTAAGGAGTTGATAGATTGATGGCAGGAGAACATGATGTCGATTTTCCAATATTTTTCGAGACAGAACTCAAAAAAATTGAAGAGAAAATAGTAGAACTAGAGAGGAAATTGAATTAGTATTGGGAGGAATGGAAGAATGAAGAGTATTATCTAGTCAAGACAGAGTGAAAGCGAAATCAATCTAGAAAAGAAGGAGAAATAAGACTTGGTTGAAGTAGAAAGTTTTCATACAAAAGTGGGAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAAATAAGAGAAGAGTTGGAATCTGTCGTGGAAGAATGAGGTTGTATGAAAGCGAAAGAAAGCGCGCAGAGAGGATGTAGGACTAACTGAAAGACAGGTGGCTGGAAAAACATTGAGGAAAAAGGACCGAGAAAGTCAGTTGACGATTTGCCAGTATTTGAAAACCTGCCAAGGGGTGCAAAATGCATTCAAGGAGAAGAAGGTGAAGTATTTGAGATAGATATGTCAGCAAGGAGAATCGTTGGCAAAATATGTCCAAAGGGGGATCGTTGACGATTGTTGTTTCAAAAGTTGGGATGAAAACCTGGAAGTGACGTTGGGACCAGGGTTGTGGAGAGGAAGTGAAGGGATCAAGGGTGTACAATAAAGAAGAAAATAAATATAAAAAAAGAAAGGTACCTAACAGGCTGTTGTAGTCAGCAAGTGATAACATGGGCGGGAATGAAAACTTGGAAGGGCACCAACACAAGTTGGGTGAAGATGAACACATGCATATTAGGTTTGTTGTCAATTGTCACGTCTTTTGTGAGAATAAAAAAGATTATGGAATTAACTGAGTCCAATTGTTGGATTTAAATTAATTGATGAGGTTCACTTGTTTGGTTTGGATTCCAATGAGTTGGTAAGGTCCACGTACCTTGAATTAGTTGGCTGTCTTTTAAGTTTTTATCCTTCACAATTCATATAGTTCGATTATGTACTGTTCCTACCACCTTGTATTGCATCCTTTGTTTGAGCGCTTTGGAAGTGAGTAATTTATTTTGGAGTTGTGATTATGGTTAGCGGGTGTGGAATTGCTTTTTTAGTGTGTTTAAGCTTTCAGTGATATGACCTAGAAATTTCTCCTCCATCCACAGAATTTTTTTATGGCTAGCTAGGTTGTGTGCTTTATAGTGTGGTTTATGAGGGGAGAGAATAAGGGATTTTTAGAGGATTGATGCTTGATTCGTTGTGAGATTGTTTCTCTTTGGTATTTGTGACAAATTTCTTTTGTAATTATTCGTTGGGTCTTATTTTATTCAATTAGACCCTTTTTTCACCTTTGCGTTAGTTCTCAAAACATGTTTATTACTTCTATTTCCTCTGAAGAAAATTTGTTTGATTGACTTCCGCATCTCTGTTTCTCTTGATGAGTATAGCTGAGGAGTGTCATTGATCCAAAGAGACACTACAAGAAGGGTGATTCGAAATCAAAAACGCTTCCCAAATATTTCCAGGCAAGCTTTTAGTTCAAGTGTTTTGCTAATTTTATACATGGGCAAAATAAAATTTTCTAATTTGACATAATTTACAGTGTCTGTATCTGCTTTAGACCTATGTAATGTTTTAAGTACTTTTCAGGTGGGAACTGTGGTTGAGTCTTCTTTGGACTTCTTCTCGGGTAGATTAACAAAGAAAGAAAGGAAAGCAACGCTTGCAGATGAGCTGCTATCCGATCAGGCTCTCACTCAGTACAGGTTTGATCTTTTATCATTTCCTCTTGCTATTGCAAAAATTTTCCAGTGAAGGAAAAGAAATGGAGAAGTATATGGCTACCCATTTTGAATTCTACAAGTTATCCATTCCTAAGCTATGGCTGCTTCCTAAGAATCACTTGCATGGGACATCATTTTTTATGCTTGTTTATGAACTTAAACTTAGAATTGAAAAATGTAAAGCGTATTCTAATGCAAGATTGGTGGAACATGATACGACTCTTGTCTTATCATTTTTTGTGTCTATCAAAACAGATTGCAGTGATAACATCTCCTCAACCAGTTTTCTCATCGACTCTCACCTCATAATTTCAAAGATTCCTTTGTTTTAACTTTCAACTCACAATGTATTAATTCTGGTACATTATCAAACATTTTGTTGTACTTATGCTCTTTCTAAAACCTCTTGCAGAAAACGTAAAGTTCGAGAAATCGAAGAACAGAATCGACCTGGTGGCAACGATAAATGGAAAATAAGGGGTAATCATTCACGAAAACGGGCAAAGGATAGGAGGAACTAGTTAAGCTTTCTCACAATTTTGACTTGTAAGCCAGATAAAAACGGCAGGATCAAAAATCAAGTTCAAGCGGGAATGTGACTCATTGTGATACAAAAGTATGCGAATTCATCATTAGTACTGGCGGTTCCAACTTGATTTATGTGCTTGGTCAAATATTACCCCCTTATTGAGTTGATTTGTATTAGGAAATGCAATGTAACTGAGAAATTACTTTTATTGACAAAGAAAGTTAGGACAAAAGTGCTTTTTGAGGAACGGACGTGCTGCCGTTCTGTCCATAAACCATTGGGAATACGAACAAAGCATATGATTGACTTTTTTATGTGTGTTTAAGAAAGTTTTGTAGAGTTGAAAGGTTGAATGGTAACTATCTT

mRNA sequence

GATTTAATCAAATTTTAATATTAATGTAAGTTGAGGGTCAATTTTTGCGATTAGTAAAAAAGAAAAAAATTGACCTCTAAGAAACCCTCGTGAACCCAGGCAGCCCTCTCGCGCCAACCCTCATTCACTCGCCGTCTCCTCCTCAATCTTCTTCAATCTCCCGATCTTGCACTACGCAAGACAGCTTAATCCCTAGGTTTCGTGGGTCTGCCGTGTGTTCATTGTCGACGTCGTGGAATTTTTTTAAAATACTTTGATGTCGGAAAGAAAGCCCATAATTGGTCTCTCTTGGGAGCCAAAGCTGCCAGCCTCCTCATCGGGAATCAAAACTAAAACCTGCGACAAATCTAATAATCAAGCAGAAAACGGTATTGTTTGGAAAAGCAATTCAGAGCTTGTAGATGGGTTATTTGTTCCACCAAACAACCCAAAAAAGTTGAATAAGTTATTGAGAAAGCAAGTCAGTGACACGGCTGGGAGGAATTGGTTTGACATGCCAGCAAAAACCATGACCCCTGAAGTGGAAAAAGATTTGCGCCTGTTGAAGCTGAGGAGTGTCATTGATCCAAAGAGACACTACAAGAAGGGTGATTCGAAATCAAAAACGCTTCCCAAATATTTCCAGGTGGGAACTGTGGTTGAGTCTTCTTTGGACTTCTTCTCGGGTAGATTAACAAAGAAAGAAAGGAAAGCAACGCTTGCAGATGAGCTGCTATCCGATCAGGCTCTCACTCAGTACAGAAAACGTAAAGTTCGAGAAATCGAAGAACAGAATCGACCTGGTGGCAACGATAAATGGAAAATAAGGGGTAATCATTCACGAAAACGGGCAAAGGATAGGAGGAACTAGTTAAGCTTTCTCACAATTTTGACTTGTAAGCCAGATAAAAACGGCAGGATCAAAAATCAAGTTCAAGCGGGAATGTGACTCATTGTGATACAAAAGTATGCGAATTCATCATTAGTACTGGCGGTTCCAACTTGATTTATGTGCTTGGTCAAATATTACCCCCTTATTGAGTTGATTTGTATTAGGAAATGCAATGTAACTGAGAAATTACTTTTATTGACAAAGAAAGTTAGGACAAAAGTGCTTTTTGAGGAACGGACGTGCTGCCGTTCTGTCCATAAACCATTGGGAATACGAACAAAGCATATGATTGACTTTTTTATGTGTGTTTAAGAAAGTTTTGTAGAGTTGAAAGGTTGAATGGTAACTATCTT

Coding sequence (CDS)

ATGTCGGAAAGAAAGCCCATAATTGGTCTCTCTTGGGAGCCAAAGCTGCCAGCCTCCTCATCGGGAATCAAAACTAAAACCTGCGACAAATCTAATAATCAAGCAGAAAACGGTATTGTTTGGAAAAGCAATTCAGAGCTTGTAGATGGGTTATTTGTTCCACCAAACAACCCAAAAAAGTTGAATAAGTTATTGAGAAAGCAAGTCAGTGACACGGCTGGGAGGAATTGGTTTGACATGCCAGCAAAAACCATGACCCCTGAAGTGGAAAAAGATTTGCGCCTGTTGAAGCTGAGGAGTGTCATTGATCCAAAGAGACACTACAAGAAGGGTGATTCGAAATCAAAAACGCTTCCCAAATATTTCCAGGTGGGAACTGTGGTTGAGTCTTCTTTGGACTTCTTCTCGGGTAGATTAACAAAGAAAGAAAGGAAAGCAACGCTTGCAGATGAGCTGCTATCCGATCAGGCTCTCACTCAGTACAGAAAACGTAAAGTTCGAGAAATCGAAGAACAGAATCGACCTGGTGGCAACGATAAATGGAAAATAAGGGGTAATCATTCACGAAAACGGGCAAAGGATAGGAGGAACTAG

Protein sequence

MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKKLNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDKWKIRGNHSRKRAKDRRN
Homology
BLAST of Cmc11g0312141 vs. NCBI nr
Match: XP_008459856.1 (PREDICTED: rRNA-processing protein fcf2 [Cucumis melo])

HSP 1 Score: 391.7 bits (1005), Expect = 3.7e-105
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0

Query: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60
           MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK
Sbjct: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180
           YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180

Query: 181 WKIRGNHSRKRAKDRRN 198
           WKIRGNHSRKRAKDRRN
Sbjct: 181 WKIRGNHSRKRAKDRRN 197

BLAST of Cmc11g0312141 vs. NCBI nr
Match: XP_011656806.1 (rRNA-processing protein fcf2 [Cucumis sativus] >KGN46455.1 hypothetical protein Csa_005413 [Cucumis sativus])

HSP 1 Score: 380.9 bits (977), Expect = 6.4e-102
Identity = 191/197 (96.95%), Postives = 195/197 (98.98%), Query Frame = 0

Query: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60
           MS+ KPIIGLSWEPKLPASSSGIK KTCDKSN+QAENG+VWKSNSELVDGLFVPPNNPKK
Sbjct: 1   MSKGKPIIGLSWEPKLPASSSGIKAKTCDKSNSQAENGLVWKSNSELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180
           YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180

Query: 181 WKIRGNHSRKRAKDRRN 198
           WKIRG+HSRKRAKDRRN
Sbjct: 181 WKIRGHHSRKRAKDRRN 197

BLAST of Cmc11g0312141 vs. NCBI nr
Match: XP_038876081.1 (rRNA-processing protein fcf2 [Benincasa hispida] >XP_038876082.1 rRNA-processing protein fcf2 [Benincasa hispida])

HSP 1 Score: 373.6 bits (958), Expect = 1.0e-99
Identity = 186/197 (94.42%), Postives = 192/197 (97.46%), Query Frame = 0

Query: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60
           MSE+KPIIGLSWEPKLPASSSGI+TK CDKSN QAENG+VWK+NSELVDGLFVPPNNPKK
Sbjct: 1   MSEKKPIIGLSWEPKLPASSSGIRTKACDKSNTQAENGLVWKTNSELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQV DTAGRNWFDMPA+TMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVRDTAGRNWFDMPAQTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180
           YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKV+EIEEQNRP GNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 180

Query: 181 WKIRGNHSRKRAKDRRN 198
           WKIRG HSRKRAKDRRN
Sbjct: 181 WKIRGRHSRKRAKDRRN 197

BLAST of Cmc11g0312141 vs. NCBI nr
Match: KAG6592956.1 (hypothetical protein SDJN03_12432, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 362.8 bits (930), Expect = 1.8e-96
Identity = 180/197 (91.37%), Postives = 191/197 (96.95%), Query Frame = 0

Query: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60
           MS +KP+I LSWEPKLP SSSGIKTK CDKS++QAENG+VWK+NSELVDGLFVPPNNPKK
Sbjct: 1   MSGKKPVISLSWEPKLPTSSSGIKTKACDKSHSQAENGLVWKNNSELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGR+WFDMPA+TMTPE+EKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPEMEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180
           YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKV+EIEEQNRPGGNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPGGNDK 180

Query: 181 WKIRGNHSRKRAKDRRN 198
           WKIRG  SRKRAK+RRN
Sbjct: 181 WKIRGRQSRKRAKERRN 197

BLAST of Cmc11g0312141 vs. NCBI nr
Match: XP_022960049.1 (rRNA-processing protein fcf2-like [Cucurbita moschata])

HSP 1 Score: 362.1 bits (928), Expect = 3.1e-96
Identity = 180/197 (91.37%), Postives = 190/197 (96.45%), Query Frame = 0

Query: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60
           MS +KP+I LSWEPKLP SSSGIKTK CDKS++QA NG+VWK+NSELVDGLFVPPNNPKK
Sbjct: 1   MSGKKPVISLSWEPKLPTSSSGIKTKACDKSHSQAGNGLVWKNNSELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGRNWFDMPA+TMTPE+EKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAQTMTPEMEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180
           YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKV+EIEEQNRPGGNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPGGNDK 180

Query: 181 WKIRGNHSRKRAKDRRN 198
           WKIRG  SRKRAK+RRN
Sbjct: 181 WKIRGRQSRKRAKERRN 197

BLAST of Cmc11g0312141 vs. ExPASy Swiss-Prot
Match: O42877 (rRNA-processing protein fcf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=fcf2 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.0e-26
Identity = 55/117 (47.01%), Postives = 82/117 (70.09%), Query Frame = 0

Query: 66  RKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQVG 125
           +K + DTAG NWFDMPA  +T  V++D++LLK+R+ +DPKRHY++ ++KS  +PKYFQVG
Sbjct: 104 KKNIKDTAGSNWFDMPATELTESVKRDIQLLKMRNALDPKRHYRRENTKS--MPKYFQVG 163

Query: 126 TVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDKWK 183
           ++VE   DF+S R+  +ERK T+ DELL D     Y K+K  E+++    G   ++K
Sbjct: 164 SIVEGPQDFYSSRIPTRERKETIVDELLHDSERRSYFKKKYLELQKSKMSGRKGQYK 218

BLAST of Cmc11g0312141 vs. ExPASy Swiss-Prot
Match: Q5QJE6 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Homo sapiens OX=9606 GN=DNTTIP2 PE=1 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 6.2e-23
Identity = 56/119 (47.06%), Postives = 76/119 (63.87%), Query Frame = 0

Query: 53  VPPNNPKK--LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKK 112
           VPP +  K  L K  RK+   TAG  WF M A  MT E++ DL+ LK+R+ +DPKR YKK
Sbjct: 619 VPPYSESKYQLQKKRRKERQKTAGDGWFGMKAPEMTNELKNDLKALKMRASMDPKRFYKK 678

Query: 113 GDSKSKTLPKYFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREI 170
            D      PKYFQ+GT+V++  DF+  R+ KK+RK T+ +ELL+D    +Y +RK  EI
Sbjct: 679 NDRDG--FPKYFQIGTIVDNPADFYHSRIPKKQRKRTIVEELLADSEFRRYNRRKYSEI 735

BLAST of Cmc11g0312141 vs. ExPASy Swiss-Prot
Match: Q8R2M2 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Mus musculus OX=10090 GN=Dnttip2 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.1e-22
Identity = 57/130 (43.85%), Postives = 78/130 (60.00%), Query Frame = 0

Query: 53  VPPNNPKK--LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKK 112
           VPP +  K  L K  RK+   TAG  WF M A  +T E++ DLR LK+R+ +DPKR YKK
Sbjct: 621 VPPYSESKHRLQKQRRKERQKTAGNGWFGMKAPELTDELKNDLRALKMRAGMDPKRFYKK 680

Query: 113 GDSKSKTLPKYFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIE 172
            D      PKYFQVGT+V++  DF+  R+ KK+RK T+ +ELL+D    ++ +RK  EI 
Sbjct: 681 NDRDG--FPKYFQVGTIVDNPADFYHSRIPKKQRKKTIVEELLADSEFRRFNRRKYSEIM 740

Query: 173 EQNRPGGNDK 181
            +       K
Sbjct: 741 AEKAANAEGK 748

BLAST of Cmc11g0312141 vs. ExPASy Swiss-Prot
Match: Q0P5H2 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Bos taurus OX=9913 GN=DNTTIP2 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.0e-22
Identity = 54/119 (45.38%), Postives = 76/119 (63.87%), Query Frame = 0

Query: 53  VPP--NNPKKLNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKK 112
           VPP   +  KL K  R++   TAG  WF M A  +T E++ DL+ LK+R+ +DPKR YKK
Sbjct: 629 VPPYSESKYKLQKKRRQERQKTAGDGWFGMKAPELTDELKNDLKALKMRASMDPKRFYKK 688

Query: 113 GDSKSKTLPKYFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREI 170
            D      PKYFQ+GT+V++  DF+  R+ KK+RK T+ +ELL+D    +Y +RK  EI
Sbjct: 689 NDRDG--FPKYFQIGTIVDNPADFYHSRVPKKQRKRTIVEELLADSEFRRYNRRKYSEI 745

BLAST of Cmc11g0312141 vs. ExPASy Swiss-Prot
Match: Q12035 (rRNA-processing protein FCF2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FCF2 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.6e-17
Identity = 56/160 (35.00%), Postives = 86/160 (53.75%), Query Frame = 0

Query: 42  KSNSELVDGLFVPPNNPKKLNKL--------LRKQVSDTAGRNWFDMPA--KTMTPEVEK 101
           K   +L  G     N  KK N L         +   SD    +WF +P     M  EV++
Sbjct: 60  KKLPKLETGFDALANKKKKKNVLPSVETEDKRKPNKSDKNDNDWFTLPKPDDNMRREVQR 119

Query: 102 DLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFSGRLTKKERKATLADE 161
           DL L+K R+ +DPKRHYKK   +   +P+ F +GT++E   +F+S R+ +KERK+T+ + 
Sbjct: 120 DLLLIKHRAALDPKRHYKK---QRWEVPERFAIGTIIEDKSEFYSSRMNRKERKSTILET 179

Query: 162 LLSDQALTQYRKRKVREIEEQNRPGGNDKWKIRGNHSRKR 192
           L+ D+A  +Y KRK  EI+E++  G    +K      +KR
Sbjct: 180 LMGDEASNKYFKRKYNEIQEKSTSGRKAHYKKMKEMRKKR 216

BLAST of Cmc11g0312141 vs. ExPASy TrEMBL
Match: A0A1S3CB58 (rRNA-processing protein fcf2 OS=Cucumis melo OX=3656 GN=LOC103498854 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.8e-105
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0

Query: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60
           MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK
Sbjct: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180
           YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180

Query: 181 WKIRGNHSRKRAKDRRN 198
           WKIRGNHSRKRAKDRRN
Sbjct: 181 WKIRGNHSRKRAKDRRN 197

BLAST of Cmc11g0312141 vs. ExPASy TrEMBL
Match: A0A0A0K9M7 (Fcf2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094730 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.1e-102
Identity = 191/197 (96.95%), Postives = 195/197 (98.98%), Query Frame = 0

Query: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60
           MS+ KPIIGLSWEPKLPASSSGIK KTCDKSN+QAENG+VWKSNSELVDGLFVPPNNPKK
Sbjct: 1   MSKGKPIIGLSWEPKLPASSSGIKAKTCDKSNSQAENGLVWKSNSELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180
           YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180

Query: 181 WKIRGNHSRKRAKDRRN 198
           WKIRG+HSRKRAKDRRN
Sbjct: 181 WKIRGHHSRKRAKDRRN 197

BLAST of Cmc11g0312141 vs. ExPASy TrEMBL
Match: A0A6J1H9T2 (rRNA-processing protein fcf2-like OS=Cucurbita moschata OX=3662 GN=LOC111460917 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96
Identity = 180/197 (91.37%), Postives = 190/197 (96.45%), Query Frame = 0

Query: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60
           MS +KP+I LSWEPKLP SSSGIKTK CDKS++QA NG+VWK+NSELVDGLFVPPNNPKK
Sbjct: 1   MSGKKPVISLSWEPKLPTSSSGIKTKACDKSHSQAGNGLVWKNNSELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGRNWFDMPA+TMTPE+EKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAQTMTPEMEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180
           YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKV+EIEEQNRPGGNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPGGNDK 180

Query: 181 WKIRGNHSRKRAKDRRN 198
           WKIRG  SRKRAK+RRN
Sbjct: 181 WKIRGRQSRKRAKERRN 197

BLAST of Cmc11g0312141 vs. ExPASy TrEMBL
Match: A0A6J1KU17 (rRNA-processing protein fcf2-like OS=Cucurbita maxima OX=3661 GN=LOC111498206 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.6e-96
Identity = 179/197 (90.86%), Postives = 191/197 (96.95%), Query Frame = 0

Query: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60
           MS +KP+I LSWEPKLP SSSGIKTK CDKS++QAENG+VWK+NSELVDGLFVPPNNPKK
Sbjct: 2   MSGKKPVISLSWEPKLPTSSSGIKTKACDKSHSQAENGLVWKNNSELVDGLFVPPNNPKK 61

Query: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGR+WFDMPA+TMTPE+EKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 62  LNKLLRKQVSDTAGRSWFDMPAQTMTPEMEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 121

Query: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180
           YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKV+EIEEQNRPGGNDK
Sbjct: 122 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPGGNDK 181

Query: 181 WKIRGNHSRKRAKDRRN 198
           WKIRG  S+KRAK+RRN
Sbjct: 182 WKIRGRQSQKRAKERRN 198

BLAST of Cmc11g0312141 vs. ExPASy TrEMBL
Match: A0A6J1DMD6 (rRNA-processing protein fcf2 OS=Momordica charantia OX=3673 GN=LOC111022552 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.7e-95
Identity = 178/197 (90.36%), Postives = 189/197 (95.94%), Query Frame = 0

Query: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60
           MSE+KP+IGLSWEPKL  SSSGIKTKTCDKS+ Q E+ +VWK+N+ELVDGLFVPPNNPKK
Sbjct: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60

Query: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120
           LNKLLRKQVSDTAGR+WFDMPA+TMTPE+EKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK
Sbjct: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180
           YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEE NRP GNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEELNRPAGNDK 180

Query: 181 WKIRGNHSRKRAKDRRN 198
           WKIRG HSRKRAK+RRN
Sbjct: 181 WKIRGRHSRKRAKERRN 197

BLAST of Cmc11g0312141 vs. TAIR 10
Match: AT5G30495.2 (Fcf2 pre-rRNA processing protein )

HSP 1 Score: 232.6 bits (592), Expect = 2.6e-61
Identity = 120/200 (60.00%), Postives = 155/200 (77.50%), Query Frame = 0

Query: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQA---ENGIVWKSNSELVDGLFVPPNN 60
           M+E KP+IGL+WEPKLP  S  + TKTC  S+ +    E+  +W S SELVDGL +PPN+
Sbjct: 1   MAETKPLIGLTWEPKLPGLS--LDTKTCSTSSKRVESHESSSLWMSKSELVDGLCLPPND 60

Query: 61  PKKLNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKT 120
           PKK+NK++RKQ+ DT G NWFDMPA TMTPE+++DL+LLKLR+V+DP  HYKK  S+SK 
Sbjct: 61  PKKINKMIRKQIKDTTGSNWFDMPAPTMTPELKRDLQLLKLRTVMDPAVHYKKSVSRSKL 120

Query: 121 LPKYFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGG 180
             KYFQ+GTV+E + +F+ GRLTKK RKATLADEL+SD  ++QYRKRKV+EIEE++R   
Sbjct: 121 AEKYFQIGTVIEPAEEFY-GRLTKKNRKATLADELVSDPKVSQYRKRKVKEIEEKSRAVT 180

Query: 181 NDKWKIRGNHSRKRAKDRRN 198
           N KWK +GN +  + K RRN
Sbjct: 181 NKKWKKKGNQTTNK-KQRRN 196

BLAST of Cmc11g0312141 vs. TAIR 10
Match: AT5G30495.1 (Fcf2 pre-rRNA processing protein )

HSP 1 Score: 232.6 bits (592), Expect = 2.6e-61
Identity = 120/200 (60.00%), Postives = 155/200 (77.50%), Query Frame = 0

Query: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQA---ENGIVWKSNSELVDGLFVPPNN 60
           M+E KP+IGL+WEPKLP  S  + TKTC  S+ +    E+  +W S SELVDGL +PPN+
Sbjct: 1   MAETKPLIGLTWEPKLPGLS--LDTKTCSTSSKRVESHESSSLWMSKSELVDGLCLPPND 60

Query: 61  PKKLNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKT 120
           PKK+NK++RKQ+ DT G NWFDMPA TMTPE+++DL+LLKLR+V+DP  HYKK  S+SK 
Sbjct: 61  PKKINKMIRKQIKDTTGSNWFDMPAPTMTPELKRDLQLLKLRTVMDPAVHYKKSVSRSKL 120

Query: 121 LPKYFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGG 180
             KYFQ+GTV+E + +F+ GRLTKK RKATLADEL+SD  ++QYRKRKV+EIEE++R   
Sbjct: 121 AEKYFQIGTVIEPAEEFY-GRLTKKNRKATLADELVSDPKVSQYRKRKVKEIEEKSRAVT 180

Query: 181 NDKWKIRGNHSRKRAKDRRN 198
           N KWK +GN +  + K RRN
Sbjct: 181 NKKWKKKGNQTTNK-KQRRN 196

BLAST of Cmc11g0312141 vs. TAIR 10
Match: AT1G54770.1 (Fcf2 pre-rRNA processing protein )

HSP 1 Score: 212.6 bits (540), Expect = 2.8e-55
Identity = 112/194 (57.73%), Postives = 142/194 (73.20%), Query Frame = 0

Query: 4   RKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKKLNK 63
           ++P+IGL WEPKLP  S  +KT +      ++       S SELVDGL +PPN+P+K+NK
Sbjct: 5   KQPLIGLKWEPKLPGLSLDLKTGSTRSKTAES-------SKSELVDGLCLPPNDPRKINK 64

Query: 64  LLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQ 123
           ++RKQ+ DT G NWFDMPA TMTPE+++DL+LLKLR+V+DP  HYKK  S+SK   KYFQ
Sbjct: 65  MIRKQLKDTTGSNWFDMPAPTMTPELKRDLQLLKLRTVMDPALHYKKSVSRSKLAEKYFQ 124

Query: 124 VGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDKWKI 183
           +GTV+E + +F+ GRLTKK RKATLADEL+SD     YRKRKVREIEE++R   N KW  
Sbjct: 125 IGTVIEPAEEFY-GRLTKKNRKATLADELVSDPKTALYRKRKVREIEEKSRAVTNKKWNK 184

Query: 184 RGNHSRKRAKDRRN 198
           +GN S K  K RRN
Sbjct: 185 KGNQS-KNTKPRRN 189

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008459856.13.7e-105100.00PREDICTED: rRNA-processing protein fcf2 [Cucumis melo][more]
XP_011656806.16.4e-10296.95rRNA-processing protein fcf2 [Cucumis sativus] >KGN46455.1 hypothetical protein ... [more]
XP_038876081.11.0e-9994.42rRNA-processing protein fcf2 [Benincasa hispida] >XP_038876082.1 rRNA-processing... [more]
KAG6592956.11.8e-9691.37hypothetical protein SDJN03_12432, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022960049.13.1e-9691.37rRNA-processing protein fcf2-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
O428776.0e-2647.01rRNA-processing protein fcf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
Q5QJE66.2e-2347.06Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Homo sapiens OX=96... [more]
Q8R2M23.1e-2243.85Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Mus musculus OX=10... [more]
Q0P5H24.0e-2245.38Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Bos taurus OX=9913... [more]
Q120356.6e-1735.00rRNA-processing protein FCF2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S... [more]
Match NameE-valueIdentityDescription
A0A1S3CB581.8e-105100.00rRNA-processing protein fcf2 OS=Cucumis melo OX=3656 GN=LOC103498854 PE=4 SV=1[more]
A0A0A0K9M73.1e-10296.95Fcf2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094730 PE=4 S... [more]
A0A6J1H9T21.5e-9691.37rRNA-processing protein fcf2-like OS=Cucurbita moschata OX=3662 GN=LOC111460917 ... [more]
A0A6J1KU172.6e-9690.86rRNA-processing protein fcf2-like OS=Cucurbita maxima OX=3661 GN=LOC111498206 PE... [more]
A0A6J1DMD63.7e-9590.36rRNA-processing protein fcf2 OS=Momordica charantia OX=3673 GN=LOC111022552 PE=4... [more]
Match NameE-valueIdentityDescription
AT5G30495.22.6e-6160.00Fcf2 pre-rRNA processing protein [more]
AT5G30495.12.6e-6160.00Fcf2 pre-rRNA processing protein [more]
AT1G54770.12.8e-5557.73Fcf2 pre-rRNA processing protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014810Fcf2 pre-rRNA processing, C-terminalPFAMPF08698Fcf2coord: 71..165
e-value: 7.7E-38
score: 128.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
IPR039883Fcf2/DNTTIP2PANTHERPTHR21686UNCHARACTERIZEDcoord: 6..192

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0312141.1Cmc11g0312141.1mRNA