Cmc11g0312141 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATTTAATCAAATTTTAATATTAATGTAAGTTGAGGGTCAATTTTTGCGATTAGTAAAAAAGAAAAAAATTGACCTCTAAGAAACCCTCGTGAACCCAGGCAGCCCTCTCGCGCCAACCCTCATTCACTCGCCGTCTCCTCCTCAATCTTCTTCAATCTCCCGATCTTGCACTACGCAAGACAGCTTAATCCCTAGGTTTCGTGGGTCTGCCGTGTGTTCATTGTCGACGTCGTGGAATTTTTTTAAAATACTTTGATGTCGGAAAGAAAGCCCATAATTGGTCTCTCTTGGGAGCCAAAGCTGCCAGCCTCCTCATCGGGAATCAAAACTAAAACCTGCGACAAATCTAATAATCAAGCAGAAAACGGTATTGTTTGGAAAAGCAATTCAGAGCTTGTAGATGGGTTATTTGTTCCACCAAACAACCCAAAAAAGTTGAATAAGTTATTGAGAAAGCAAGTCAGTGACACGGCTGGGAGGAATTGGTACATGCTCTCTTCTCTATAAATTTCGGCAGTTTTACTATTGATTCCTGAAAAAAAAAACCAAACTAAGGTTTTTTTCTAATTTTTTTTAATGCTGATTAACCATAGTAGTTGATGTTCTAAATTCTGATACCTATACGCTTGTCACTGTAACTAGGTTTGACATGCCAGCAAAAACCATGACCCCTGAAGTGGAAAAAGATTTGCGCCTGTTGAAGGTGAGACTGTCTCTGATGTACTATCCATTTCACTTTTGATCAGTTTTCTACCCTCACATGTAGCAAGCTGGTAATTTTGACCACGTATCAAATGTTTTCTTCTAGTTCTTTTTTTCATTACGTACCAGACTATTTTTCTTCTTGGAATTCATTTGCTTTTCTTTGGAAGGTGAAACTCCTAAATAATGTGAAGTTTTTTGTCTCCCAAGTTATCCATGGAGAATCAATACCTTAGATAAGCTCTTTAGGAAAACGCCTATATTAACACATAGTTAAAGAAGTTGTAAGGGTATTTGGTTATAAATGTGAGAGGTGAAGAAGGGGAAAGTTAGACATGATGTTGATGAGTGAATTGGAGCTTTAGATCTCAAGGGGGAAGGAGGGCCCAAGTACTTTGAATTACTTGTCTATCCTGTAAGCTTTCAAGTTTCATCCTTTACATTAACATTCTAATATAGTTTGATCTTGTAGTGCTTCCTACCAAATTATTATAGAGCTTTTTTCGGTTCTGGCCATGAAGTTTGAGTGAACTATACTGAAGAGTGTTTGTGAAAGGTTTAAGGAGTTGATAGATTGATGGCAGGAGAACATGATGTCGATTTTCCAATATTTTTCGAGACAGAACTCAAAAAAATTGAAGAGAAAATAGTAGAACTAGAGAGGAAATTGAATTAGTATTGGGAGGAATGGAAGAATGAAGAGTATTATCTAGTCAAGACAGAGTGAAAGCGAAATCAATCTAGAAAAGAAGGAGAAATAAGACTTGGTTGAAGTAGAAAGTTTTCATACAAAAGTGGGAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAAATAAGAGAAGAGTTGGAATCTGTCGTGGAAGAATGAGGTTGTATGAAAGCGAAAGAAAGCGCGCAGAGAGGATGTAGGACTAACTGAAAGACAGGTGGCTGGAAAAACATTGAGGAAAAAGGACCGAGAAAGTCAGTTGACGATTTGCCAGTATTTGAAAACCTGCCAAGGGGTGCAAAATGCATTCAAGGAGAAGAAGGTGAAGTATTTGAGATAGATATGTCAGCAAGGAGAATCGTTGGCAAAATATGTCCAAAGGGGGATCGTTGACGATTGTTGTTTCAAAAGTTGGGATGAAAACCTGGAAGTGACGTTGGGACCAGGGTTGTGGAGAGGAAGTGAAGGGATCAAGGGTGTACAATAAAGAAGAAAATAAATATAAAAAAAGAAAGGTACCTAACAGGCTGTTGTAGTCAGCAAGTGATAACATGGGCGGGAATGAAAACTTGGAAGGGCACCAACACAAGTTGGGTGAAGATGAACACATGCATATTAGGTTTGTTGTCAATTGTCACGTCTTTTGTGAGAATAAAAAAGATTATGGAATTAACTGAGTCCAATTGTTGGATTTAAATTAATTGATGAGGTTCACTTGTTTGGTTTGGATTCCAATGAGTTGGTAAGGTCCACGTACCTTGAATTAGTTGGCTGTCTTTTAAGTTTTTATCCTTCACAATTCATATAGTTCGATTATGTACTGTTCCTACCACCTTGTATTGCATCCTTTGTTTGAGCGCTTTGGAAGTGAGTAATTTATTTTGGAGTTGTGATTATGGTTAGCGGGTGTGGAATTGCTTTTTTAGTGTGTTTAAGCTTTCAGTGATATGACCTAGAAATTTCTCCTCCATCCACAGAATTTTTTTATGGCTAGCTAGGTTGTGTGCTTTATAGTGTGGTTTATGAGGGGAGAGAATAAGGGATTTTTAGAGGATTGATGCTTGATTCGTTGTGAGATTGTTTCTCTTTGGTATTTGTGACAAATTTCTTTTGTAATTATTCGTTGGGTCTTATTTTATTCAATTAGACCCTTTTTTCACCTTTGCGTTAGTTCTCAAAACATGTTTATTACTTCTATTTCCTCTGAAGAAAATTTGTTTGATTGACTTCCGCATCTCTGTTTCTCTTGATGAGTATAGCTGAGGAGTGTCATTGATCCAAAGAGACACTACAAGAAGGGTGATTCGAAATCAAAAACGCTTCCCAAATATTTCCAGGCAAGCTTTTAGTTCAAGTGTTTTGCTAATTTTATACATGGGCAAAATAAAATTTTCTAATTTGACATAATTTACAGTGTCTGTATCTGCTTTAGACCTATGTAATGTTTTAAGTACTTTTCAGGTGGGAACTGTGGTTGAGTCTTCTTTGGACTTCTTCTCGGGTAGATTAACAAAGAAAGAAAGGAAAGCAACGCTTGCAGATGAGCTGCTATCCGATCAGGCTCTCACTCAGTACAGGTTTGATCTTTTATCATTTCCTCTTGCTATTGCAAAAATTTTCCAGTGAAGGAAAAGAAATGGAGAAGTATATGGCTACCCATTTTGAATTCTACAAGTTATCCATTCCTAAGCTATGGCTGCTTCCTAAGAATCACTTGCATGGGACATCATTTTTTATGCTTGTTTATGAACTTAAACTTAGAATTGAAAAATGTAAAGCGTATTCTAATGCAAGATTGGTGGAACATGATACGACTCTTGTCTTATCATTTTTTGTGTCTATCAAAACAGATTGCAGTGATAACATCTCCTCAACCAGTTTTCTCATCGACTCTCACCTCATAATTTCAAAGATTCCTTTGTTTTAACTTTCAACTCACAATGTATTAATTCTGGTACATTATCAAACATTTTGTTGTACTTATGCTCTTTCTAAAACCTCTTGCAGAAAACGTAAAGTTCGAGAAATCGAAGAACAGAATCGACCTGGTGGCAACGATAAATGGAAAATAAGGGGTAATCATTCACGAAAACGGGCAAAGGATAGGAGGAACTAGTTAAGCTTTCTCACAATTTTGACTTGTAAGCCAGATAAAAACGGCAGGATCAAAAATCAAGTTCAAGCGGGAATGTGACTCATTGTGATACAAAAGTATGCGAATTCATCATTAGTACTGGCGGTTCCAACTTGATTTATGTGCTTGGTCAAATATTACCCCCTTATTGAGTTGATTTGTATTAGGAAATGCAATGTAACTGAGAAATTACTTTTATTGACAAAGAAAGTTAGGACAAAAGTGCTTTTTGAGGAACGGACGTGCTGCCGTTCTGTCCATAAACCATTGGGAATACGAACAAAGCATATGATTGACTTTTTTATGTGTGTTTAAGAAAGTTTTGTAGAGTTGAAAGGTTGAATGGTAACTATCTT GATTTAATCAAATTTTAATATTAATGTAAGTTGAGGGTCAATTTTTGCGATTAGTAAAAAAGAAAAAAATTGACCTCTAAGAAACCCTCGTGAACCCAGGCAGCCCTCTCGCGCCAACCCTCATTCACTCGCCGTCTCCTCCTCAATCTTCTTCAATCTCCCGATCTTGCACTACGCAAGACAGCTTAATCCCTAGGTTTCGTGGGTCTGCCGTGTGTTCATTGTCGACGTCGTGGAATTTTTTTAAAATACTTTGATGTCGGAAAGAAAGCCCATAATTGGTCTCTCTTGGGAGCCAAAGCTGCCAGCCTCCTCATCGGGAATCAAAACTAAAACCTGCGACAAATCTAATAATCAAGCAGAAAACGGTATTGTTTGGAAAAGCAATTCAGAGCTTGTAGATGGGTTATTTGTTCCACCAAACAACCCAAAAAAGTTGAATAAGTTATTGAGAAAGCAAGTCAGTGACACGGCTGGGAGGAATTGGTTTGACATGCCAGCAAAAACCATGACCCCTGAAGTGGAAAAAGATTTGCGCCTGTTGAAGCTGAGGAGTGTCATTGATCCAAAGAGACACTACAAGAAGGGTGATTCGAAATCAAAAACGCTTCCCAAATATTTCCAGGTGGGAACTGTGGTTGAGTCTTCTTTGGACTTCTTCTCGGGTAGATTAACAAAGAAAGAAAGGAAAGCAACGCTTGCAGATGAGCTGCTATCCGATCAGGCTCTCACTCAGTACAGAAAACGTAAAGTTCGAGAAATCGAAGAACAGAATCGACCTGGTGGCAACGATAAATGGAAAATAAGGGGTAATCATTCACGAAAACGGGCAAAGGATAGGAGGAACTAGTTAAGCTTTCTCACAATTTTGACTTGTAAGCCAGATAAAAACGGCAGGATCAAAAATCAAGTTCAAGCGGGAATGTGACTCATTGTGATACAAAAGTATGCGAATTCATCATTAGTACTGGCGGTTCCAACTTGATTTATGTGCTTGGTCAAATATTACCCCCTTATTGAGTTGATTTGTATTAGGAAATGCAATGTAACTGAGAAATTACTTTTATTGACAAAGAAAGTTAGGACAAAAGTGCTTTTTGAGGAACGGACGTGCTGCCGTTCTGTCCATAAACCATTGGGAATACGAACAAAGCATATGATTGACTTTTTTATGTGTGTTTAAGAAAGTTTTGTAGAGTTGAAAGGTTGAATGGTAACTATCTT ATGTCGGAAAGAAAGCCCATAATTGGTCTCTCTTGGGAGCCAAAGCTGCCAGCCTCCTCATCGGGAATCAAAACTAAAACCTGCGACAAATCTAATAATCAAGCAGAAAACGGTATTGTTTGGAAAAGCAATTCAGAGCTTGTAGATGGGTTATTTGTTCCACCAAACAACCCAAAAAAGTTGAATAAGTTATTGAGAAAGCAAGTCAGTGACACGGCTGGGAGGAATTGGTTTGACATGCCAGCAAAAACCATGACCCCTGAAGTGGAAAAAGATTTGCGCCTGTTGAAGCTGAGGAGTGTCATTGATCCAAAGAGACACTACAAGAAGGGTGATTCGAAATCAAAAACGCTTCCCAAATATTTCCAGGTGGGAACTGTGGTTGAGTCTTCTTTGGACTTCTTCTCGGGTAGATTAACAAAGAAAGAAAGGAAAGCAACGCTTGCAGATGAGCTGCTATCCGATCAGGCTCTCACTCAGTACAGAAAACGTAAAGTTCGAGAAATCGAAGAACAGAATCGACCTGGTGGCAACGATAAATGGAAAATAAGGGGTAATCATTCACGAAAACGGGCAAAGGATAGGAGGAACTAG MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKKLNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDKWKIRGNHSRKRAKDRRN Homology
BLAST of Cmc11g0312141 vs. NCBI nr
Match: XP_008459856.1 (PREDICTED: rRNA-processing protein fcf2 [Cucumis melo]) HSP 1 Score: 391.7 bits (1005), Expect = 3.7e-105 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Cmc11g0312141 vs. NCBI nr
Match: XP_011656806.1 (rRNA-processing protein fcf2 [Cucumis sativus] >KGN46455.1 hypothetical protein Csa_005413 [Cucumis sativus]) HSP 1 Score: 380.9 bits (977), Expect = 6.4e-102 Identity = 191/197 (96.95%), Postives = 195/197 (98.98%), Query Frame = 0
BLAST of Cmc11g0312141 vs. NCBI nr
Match: XP_038876081.1 (rRNA-processing protein fcf2 [Benincasa hispida] >XP_038876082.1 rRNA-processing protein fcf2 [Benincasa hispida]) HSP 1 Score: 373.6 bits (958), Expect = 1.0e-99 Identity = 186/197 (94.42%), Postives = 192/197 (97.46%), Query Frame = 0
BLAST of Cmc11g0312141 vs. NCBI nr
Match: KAG6592956.1 (hypothetical protein SDJN03_12432, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 362.8 bits (930), Expect = 1.8e-96 Identity = 180/197 (91.37%), Postives = 191/197 (96.95%), Query Frame = 0
BLAST of Cmc11g0312141 vs. NCBI nr
Match: XP_022960049.1 (rRNA-processing protein fcf2-like [Cucurbita moschata]) HSP 1 Score: 362.1 bits (928), Expect = 3.1e-96 Identity = 180/197 (91.37%), Postives = 190/197 (96.45%), Query Frame = 0
BLAST of Cmc11g0312141 vs. ExPASy Swiss-Prot
Match: O42877 (rRNA-processing protein fcf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=fcf2 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 6.0e-26 Identity = 55/117 (47.01%), Postives = 82/117 (70.09%), Query Frame = 0
BLAST of Cmc11g0312141 vs. ExPASy Swiss-Prot
Match: Q5QJE6 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Homo sapiens OX=9606 GN=DNTTIP2 PE=1 SV=2) HSP 1 Score: 109.0 bits (271), Expect = 6.2e-23 Identity = 56/119 (47.06%), Postives = 76/119 (63.87%), Query Frame = 0
BLAST of Cmc11g0312141 vs. ExPASy Swiss-Prot
Match: Q8R2M2 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Mus musculus OX=10090 GN=Dnttip2 PE=1 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 3.1e-22 Identity = 57/130 (43.85%), Postives = 78/130 (60.00%), Query Frame = 0
BLAST of Cmc11g0312141 vs. ExPASy Swiss-Prot
Match: Q0P5H2 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Bos taurus OX=9913 GN=DNTTIP2 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.0e-22 Identity = 54/119 (45.38%), Postives = 76/119 (63.87%), Query Frame = 0
BLAST of Cmc11g0312141 vs. ExPASy Swiss-Prot
Match: Q12035 (rRNA-processing protein FCF2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FCF2 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 6.6e-17 Identity = 56/160 (35.00%), Postives = 86/160 (53.75%), Query Frame = 0
BLAST of Cmc11g0312141 vs. ExPASy TrEMBL
Match: A0A1S3CB58 (rRNA-processing protein fcf2 OS=Cucumis melo OX=3656 GN=LOC103498854 PE=4 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 1.8e-105 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Cmc11g0312141 vs. ExPASy TrEMBL
Match: A0A0A0K9M7 (Fcf2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094730 PE=4 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 3.1e-102 Identity = 191/197 (96.95%), Postives = 195/197 (98.98%), Query Frame = 0
BLAST of Cmc11g0312141 vs. ExPASy TrEMBL
Match: A0A6J1H9T2 (rRNA-processing protein fcf2-like OS=Cucurbita moschata OX=3662 GN=LOC111460917 PE=4 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96 Identity = 180/197 (91.37%), Postives = 190/197 (96.45%), Query Frame = 0
BLAST of Cmc11g0312141 vs. ExPASy TrEMBL
Match: A0A6J1KU17 (rRNA-processing protein fcf2-like OS=Cucurbita maxima OX=3661 GN=LOC111498206 PE=4 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 2.6e-96 Identity = 179/197 (90.86%), Postives = 191/197 (96.95%), Query Frame = 0
BLAST of Cmc11g0312141 vs. ExPASy TrEMBL
Match: A0A6J1DMD6 (rRNA-processing protein fcf2 OS=Momordica charantia OX=3673 GN=LOC111022552 PE=4 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 3.7e-95 Identity = 178/197 (90.36%), Postives = 189/197 (95.94%), Query Frame = 0
BLAST of Cmc11g0312141 vs. TAIR 10
Match: AT5G30495.2 (Fcf2 pre-rRNA processing protein ) HSP 1 Score: 232.6 bits (592), Expect = 2.6e-61 Identity = 120/200 (60.00%), Postives = 155/200 (77.50%), Query Frame = 0
BLAST of Cmc11g0312141 vs. TAIR 10
Match: AT5G30495.1 (Fcf2 pre-rRNA processing protein ) HSP 1 Score: 232.6 bits (592), Expect = 2.6e-61 Identity = 120/200 (60.00%), Postives = 155/200 (77.50%), Query Frame = 0
BLAST of Cmc11g0312141 vs. TAIR 10
Match: AT1G54770.1 (Fcf2 pre-rRNA processing protein ) HSP 1 Score: 212.6 bits (540), Expect = 2.8e-55 Identity = 112/194 (57.73%), Postives = 142/194 (73.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
|