Cmc11g0308661 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0308661
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr11: 29604041 .. 29604887 (+)
RNA-Seq ExpressionCmc11g0308661
SyntenyCmc11g0308661
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAAGGTGAAAATTAAAAAAAATTGAGGAACAAGAATAAGAAGGATATGATTGTCTTGACAGGATTGAACTTATAATGAACAGGAGAAGCAGGGCAAGCCAAGTGATAGATCTGATCAACTTCCAGTAGAATCGGCTGAACAACGTCGTGTCGAATCAGTTCAAATCTCGGATTTCCAAAATGATGAACCAGATTATCCTTCCGTCCAGTGAAGAAATTATCAACAACGATCACGCTATCCCCTCTCTCAATCAAACGGTCCACAAGATGGCTTCCAACGAATCCAGCACCACCAGTAACAACAATCCTCAAGTTCTTATTCTTCAATCCCGGCGGAACTCTCCCCGCCAAGTTCACCCGCCCCAACGATCCTTCACGGCGAGTTTCATACAAAACTCTCCGCATCGGGATCGTCGAACCCAATCGAACAAACGAATTCAACGCCCGGTGATGATCATCACGTAACTCCGGCGGAAAAGTGAAACGGACGACATTAAAAAACAGAGTTGCAATGGCAATCCCAACAAAAACAAAGAGAAGACGTTGCTCACGAAGCATGTAACGGATCGGGCTCCTGGTTTTGCAGGAAGAACATGGCGGAGTTCGTGGTGAATCGATCACCGCCGGGGACGGATTGGATTGATTTCTTCGAAGAAGCTCAGAATTATTCATGTTGTGTAAAAAAAACAAAATTGAATATCAAAATCCCGAGAAAATATTTAATACCAAAAAGAAAGAAATTGTAGAGATTTGAATAGAGAGAGTTTAGGGTATGAGATTGAAAGATTGAAGAGAGAAAGTGAAAGATTGGAGCATTTGTGTAGGAAAGAAGGGGACGGTGACTT

mRNA sequence

GAAAAAGGTGAAAATTAAAAAAAATTGAGGAACAAGAATAAGAAGGATATGATTGTCTTGACAGGATTGAACTTATAATGAACAGGAGAAGCAGGGCAAGCCAAGTGATAGATCTGATCAACTTCCAGTAGAATCGGCTGAACAACGTCGTGTCGAATCAGTTCAAATCTCGGATTTCCAAAATGATGAACCAGATTATCCTTCCGTCCAGTGAAGAAATTATCAACAACGATCACGCTATCCCCTCTCTCAATCAAACGGTCCACAAGATGGCTTCCAACGAATCCAGCACCACCAGTAACAACAATCCTCAAGTTCTTATTCTTCAATCCCGGCGGAACTCTCCCCGCCAAGTTCACCCGCCCCAACGATCCTTCACGGCGAGTTTCATACAAAACTCTCCGCATCGGGATCGTCGAACCCAATCGAACAAACGAATTCAACGCCCGGTGATGATCATCACGTAACTCCGGCGGAAAAGTGAAACGGACGACATTAAAAAACAGAGTTGCAATGGCAATCCCAACAAAAACAAAGAGAAGACGTTGCTCACGAAGCATGTAACGGATCGGGCTCCTGGTTTTGCAGGAAGAACATGGCGGAGTTCGTGGTGAATCGATCACCGCCGGGGACGGATTGGATTGATTTCTTCGAAGAAGCTCAGAATTATTCATGTTGTGTAAAAAAAACAAAATTGAATATCAAAATCCCGAGAAAATATTTAATACCAAAAAGAAAGAAATTGTAGAGATTTGAATAGAGAGAGTTTAGGGTATGAGATTGAAAGATTGAAGAGAGAAAGTGAAAGATTGGAGCATTTGTGTAGGAAAGAAGGGGACGGTGACTT

Coding sequence (CDS)

ATGATGAACCAGATTATCCTTCCGTCCAGTGAAGAAATTATCAACAACGATCACGCTATCCCCTCTCTCAATCAAACGGTCCACAAGATGGCTTCCAACGAATCCAGCACCACCAGTAACAACAATCCTCAAGTTCTTATTCTTCAATCCCGGCGGAACTCTCCCCGCCAAGTTCACCCGCCCCAACGATCCTTCACGGCGAGTTTCATACAAAACTCTCCGCATCGGGATCGTCGAACCCAATCGAACAAACGAATTCAACGCCCGGTGATGATCATCACGTAA

Protein sequence

MMNQIILPSSEEIINNDHAIPSLNQTVHKMASNESSTTSNNNPQVLILQSRRNSPRQVHPPQRSFTASFIQNSPHRDRRTQSNKRIQRPVMIIT
Homology
[Close]
BLAST of Cmc11g0308661 vs. NCBI nr
Match: RHN79873.1 (hypothetical protein MtrunA17_Chr1g0182081 [Medicago truncatula])

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-04
Identity = 28/54 (51.85%), Postives = 41/54 (75.93%), Query Frame = 0 

Query: 2  MNQIILPSSEEIINNDHAIPSLNQTVHKMASNESSTTSNNNPQVLILQSRRNSP 56
          MNQI+ P+S++IINN++ IPS NQ +++M SN++STT N++ Q     SRRN P
Sbjct: 1  MNQILFPTSKKIINNNNIIPSTNQLINQMTSNKTSTTGNHHSQPPTTNSRRNPP 54

[Close]
BLAST of Cmc11g0308661 vs. NCBI nr
Match: RDX76085.1 (hypothetical protein CR513_43964, partial [Mucuna pruriens])

HSP 1 Score: 55.8 bits (133), Expect = 2.3e-04
Identity = 25/59 (42.37%), Postives = 43/59 (72.88%), Query Frame = 0 

Query: 1  MMNQIILPSSEEIINNDHAIPSLNQTVHKMASNESSTTSNNNPQVLILQSRRNSPRQVH 60
          MM+ ++LPS EEI+++DHA+PS NQ +H++  +E   T +++P+ L L  +R+ P +VH
Sbjct: 36 MMHHVLLPSREEIVHHDHAVPSRNQPIHQVRPHEPRATRHHDPEPLPLNPQRHLPHRVH 94

[Close]
BLAST of Cmc11g0308661 vs. ExPASy TrEMBL
Match: A0A396JU92 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0182081 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 8.4e-05
Identity = 28/54 (51.85%), Postives = 41/54 (75.93%), Query Frame = 0 

Query: 2  MNQIILPSSEEIINNDHAIPSLNQTVHKMASNESSTTSNNNPQVLILQSRRNSP 56
          MNQI+ P+S++IINN++ IPS NQ +++M SN++STT N++ Q     SRRN P
Sbjct: 1  MNQILFPTSKKIINNNNIIPSTNQLINQMTSNKTSTTGNHHSQPPTTNSRRNPP 54

[Close]
BLAST of Cmc11g0308661 vs. ExPASy TrEMBL
Match: A0A371FCR1 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_43964 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-04
Identity = 25/59 (42.37%), Postives = 43/59 (72.88%), Query Frame = 0 

Query: 1  MMNQIILPSSEEIINNDHAIPSLNQTVHKMASNESSTTSNNNPQVLILQSRRNSPRQVH 60
          MM+ ++LPS EEI+++DHA+PS NQ +H++  +E   T +++P+ L L  +R+ P +VH
Sbjct: 36 MMHHVLLPSREEIVHHDHAVPSRNQPIHQVRPHEPRATRHHDPEPLPLNPQRHLPHRVH 94

The following BLAST results are available for this feature:
BLAST of Cmc11g0308661 vs. NCBI nr
Match NameE-valueIdentityDescription
RHN79873.11.7e-0451.85hypothetical protein MtrunA17_Chr1g0182081 [Medicago truncatula][more]
RDX76085.12.3e-0442.37hypothetical protein CR513_43964, partial [Mucuna pruriens][more]
BLAST of Cmc11g0308661 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc11g0308661 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A396JU928.4e-0551.85Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0182081 ... [more]
A0A371FCR11.1e-0442.37Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_43964 P... [more]
BLAST of Cmc11g0308661 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..94

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0308661.1Cmc11g0308661.1mRNA