Cmc11g0308291 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0308291
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionSignal anchor, putative
LocationCMiso1.1chr11: 29365385 .. 29365636 (-)
RNA-Seq ExpressionCmc11g0308291
SyntenyCmc11g0308291
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTATTTCATCGAGCCTCTCTTCGAGACAGTGTCCAGATTGTTACGCCTTTCGTACGGGTTGGAACTTACTCGACAAGGAATTTTGCTACCTTAAGACTGTTATAGTTACGACCGTCGTTCACCAGGGATTCGGTCGCCGGCTCCCATGTCATCAGGTCACCAACTTCCTTGACCTTCCGGCACTAGGTAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGATCTGTGTTTTGGTAAATAG

mRNA sequence

ATGTCTATTTCATCGAGCCTCTCTTCGAGACAGTGTCCAGATTGTTACGCCTTTCGTACGGGTTGGAACTTACTCGACAAGGAATTTTGCTACCTTAAGACTGTTATAGTTACGACCGTCGTTCACCAGGGATTCGGTCGCCGGCTCCCATGTCATCAGGTCACCAACTTCCTTGACCTTCCGGCACTAGGTAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGATCTGTGTTTTGGTAAATAG

Coding sequence (CDS)

ATGTCTATTTCATCGAGCCTCTCTTCGAGACAGTGTCCAGATTGTTACGCCTTTCGTACGGGTTGGAACTTACTCGACAAGGAATTTTGCTACCTTAAGACTGTTATAGTTACGACCGTCGTTCACCAGGGATTCGGTCGCCGGCTCCCATGTCATCAGGTCACCAACTTCCTTGACCTTCCGGCACTAGGTAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGATCTGTGTTTTGGTAAATAG

Protein sequence

MSISSSLSSRQCPDCYAFRTGWNLLDKEFCYLKTVIVTTVVHQGFGRRLPCHQVTNFLDLPALGRRQPPYMVLRLCGDLCFGK
Homology
[Close]
BLAST of Cmc11g0308291 vs. NCBI nr
Match: KAG4151867.1 (hypothetical protein ERO13_D04G096660v2, partial [Gossypium hirsutum])

HSP 1 Score: 154.1 bits (388), Expect = 5.4e-34
Identity = 72/81 (88.89%), Postives = 73/81 (90.12%), Query Frame = 0 

Query: 1  MSISSSLSSRQCPDCYAFRTGWNLLDKEFCYLKTVIVTTVVHQGFGRRLPCHQVTNFLDL 60
          MSIS SLS RQCPD YAFRTGWNL DKEF YL+TVIVTT VHQ FGRRLPCHQVTNFLDL
Sbjct: 1  MSISPSLSPRQCPDHYAFRTGWNLPDKEFRYLRTVIVTTTVHQVFGRRLPCHQVTNFLDL 60

Query: 61 PALGRRQPPYMVLRLCGDLCF 82
          PALGRRQPP MVLRLCGDLCF
Sbjct: 61 PALGRRQPPNMVLRLCGDLCF 81

[Close]
BLAST of Cmc11g0308291 vs. NCBI nr
Match: TYH29308.1 (hypothetical protein ES288_A01G001200v1 [Gossypium darwinii])

HSP 1 Score: 153.7 bits (387), Expect = 7.1e-34
Identity = 71/81 (87.65%), Postives = 72/81 (88.89%), Query Frame = 0 

Query: 1  MSISSSLSSRQCPDCYAFRTGWNLLDKEFCYLKTVIVTTVVHQGFGRRLPCHQVTNFLDL 60
          MSIS SLS RQCPD YAFR G NL DKEFCYL+TVIVT  VH GFGRRLPCHQVTNFLDL
Sbjct: 1  MSISPSLSPRQCPDRYAFRAGRNLPDKEFCYLRTVIVTAAVHWGFGRRLPCHQVTNFLDL 60

Query: 61 PALGRRQPPYMVLRLCGDLCF 82
          PALGRRQPPYMVLRLCGDLCF
Sbjct: 61 PALGRRQPPYMVLRLCGDLCF 81

[Close]
BLAST of Cmc11g0308291 vs. NCBI nr
Match: KAG4109276.1 (hypothetical protein ERO13_1Z056500v2 [Gossypium hirsutum])

HSP 1 Score: 152.1 bits (383), Expect = 2.1e-33
Identity = 71/81 (87.65%), Postives = 73/81 (90.12%), Query Frame = 0 

Query: 1  MSISSSLSSRQCPDCYAFRTGWNLLDKEFCYLKTVIVTTVVHQGFGRRLPCHQVTNFLDL 60
          MSIS SLS RQCPD YAFRTG NL DKEF YL+TVIVT  VH+GFGRRLPCHQVTNFLDL
Sbjct: 1  MSISPSLSPRQCPDRYAFRTGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLDL 60

Query: 61 PALGRRQPPYMVLRLCGDLCF 82
          PALGRRQPPYMVLRLCGDLCF
Sbjct: 61 PALGRRQPPYMVLRLCGDLCF 81

[Close]
BLAST of Cmc11g0308291 vs. NCBI nr
Match: KAG2642311.1 (hypothetical protein PVAP13_2KG284596 [Panicum virgatum])

HSP 1 Score: 150.6 bits (379), Expect = 6.0e-33
Identity = 68/81 (83.95%), Postives = 73/81 (90.12%), Query Frame = 0 

Query: 1  MSISSSLSSRQCPDCYAFRTGWNLLDKEFCYLKTVIVTTVVHQGFGRRLPCHQVTNFLDL 60
          MSISSSLS RQCPD YAFR G NL DKEF YLKT+IVT+ +H+GFGRRLPCHQ TNFLDL
Sbjct: 1  MSISSSLSPRQCPDHYAFRVGQNLPDKEFRYLKTIIVTSAIHRGFGRRLPCHQFTNFLDL 60

Query: 61 PALGRRQPPYMVLRLCGDLCF 82
          PALGRRQPPYMVLRLCGD+CF
Sbjct: 61 PALGRRQPPYMVLRLCGDMCF 81

[Close]
BLAST of Cmc11g0308291 vs. NCBI nr
Match: TYI40543.1 (hypothetical protein ES332_A02G170300v1 [Gossypium tomentosum])

HSP 1 Score: 150.6 bits (379), Expect = 6.0e-33
Identity = 70/81 (86.42%), Postives = 72/81 (88.89%), Query Frame = 0 

Query: 1  MSISSSLSSRQCPDCYAFRTGWNLLDKEFCYLKTVIVTTVVHQGFGRRLPCHQVTNFLDL 60
          MSIS SLS RQCPD YAFR G NL DKEF YL+TVIVT  VH+GFGRRLPCHQVTNFLDL
Sbjct: 1  MSISPSLSPRQCPDRYAFRAGQNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLDL 60

Query: 61 PALGRRQPPYMVLRLCGDLCF 82
          PALGRRQPPYMVLRLCGDLCF
Sbjct: 61 PALGRRQPPYMVLRLCGDLCF 81

[Close]
BLAST of Cmc11g0308291 vs. ExPASy Swiss-Prot
Match: Q3BAI2 (Uncharacterized protein ORF91 OS=Phalaenopsis aphrodite subsp. formosana OX=308872 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.7e-35
Identity = 69/81 (85.19%), Postives = 72/81 (88.89%), Query Frame = 0 

Query: 1  MSISSSLSSRQCPDCYAFRTGWNLLDKEFCYLKTVIVTTVVHQGFGRRLPCHQVTNFLDL 60
          MSIS SLS RQCPD YAFR G NL DKEF YL+TV+VT  VH+GFGRRLPCHQVTNFLDL
Sbjct: 10 MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVLVTAAVHRGFGRRLPCHQVTNFLDL 69

Query: 61 PALGRRQPPYMVLRLCGDLCF 82
          PALGRRQPPYMVLRLCGDLCF
Sbjct: 70 PALGRRQPPYMVLRLCGDLCF 90

[Close]
BLAST of Cmc11g0308291 vs. ExPASy TrEMBL
Match: A0A5D2HGT3 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A01G001200v1 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.4e-34
Identity = 71/81 (87.65%), Postives = 72/81 (88.89%), Query Frame = 0 

Query: 1  MSISSSLSSRQCPDCYAFRTGWNLLDKEFCYLKTVIVTTVVHQGFGRRLPCHQVTNFLDL 60
          MSIS SLS RQCPD YAFR G NL DKEFCYL+TVIVT  VH GFGRRLPCHQVTNFLDL
Sbjct: 1  MSISPSLSPRQCPDRYAFRAGRNLPDKEFCYLRTVIVTAAVHWGFGRRLPCHQVTNFLDL 60

Query: 61 PALGRRQPPYMVLRLCGDLCF 82
          PALGRRQPPYMVLRLCGDLCF
Sbjct: 61 PALGRRQPPYMVLRLCGDLCF 81

[Close]
BLAST of Cmc11g0308291 vs. ExPASy TrEMBL
Match: A0A5D2RJB3 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A02G170300v1 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.9e-33
Identity = 70/81 (86.42%), Postives = 72/81 (88.89%), Query Frame = 0 

Query: 1  MSISSSLSSRQCPDCYAFRTGWNLLDKEFCYLKTVIVTTVVHQGFGRRLPCHQVTNFLDL 60
          MSIS SLS RQCPD YAFR G NL DKEF YL+TVIVT  VH+GFGRRLPCHQVTNFLDL
Sbjct: 1  MSISPSLSPRQCPDRYAFRAGQNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLDL 60

Query: 61 PALGRRQPPYMVLRLCGDLCF 82
          PALGRRQPPYMVLRLCGDLCF
Sbjct: 61 PALGRRQPPYMVLRLCGDLCF 81

[Close]
BLAST of Cmc11g0308291 vs. ExPASy TrEMBL
Match: A0A5N6N5S8 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_25331 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.8e-33
Identity = 70/81 (86.42%), Postives = 72/81 (88.89%), Query Frame = 0 

Query: 1   MSISSSLSSRQCPDCYAFRTGWNLLDKEFCYLKTVIVTTVVHQGFGRRLPCHQVTNFLDL 60
           MSIS SLS RQCPD YAFR G NL DKEF YL+TVIVT  VH+GFGRRLPCHQVTNFLDL
Sbjct: 311 MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLDL 370

Query: 61  PALGRRQPPYMVLRLCGDLCF 82
           PALGRRQPPYMVLRLCGDLCF
Sbjct: 371 PALGRRQPPYMVLRLCGDLCF 391

[Close]
BLAST of Cmc11g0308291 vs. ExPASy TrEMBL
Match: A0A2G2W356 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_18514 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.8e-33
Identity = 70/81 (86.42%), Postives = 72/81 (88.89%), Query Frame = 0 

Query: 1  MSISSSLSSRQCPDCYAFRTGWNLLDKEFCYLKTVIVTTVVHQGFGRRLPCHQVTNFLDL 60
          MSIS SLS RQCPD YAFR G NL DKEF YL+TVIVT  VH+GFGRRLPCHQVTNFLDL
Sbjct: 1  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLDL 60

Query: 61 PALGRRQPPYMVLRLCGDLCF 82
          PALGRRQPPYMVLRLCGDLCF
Sbjct: 61 PALGRRQPPYMVLRLCGDLCF 81

[Close]
BLAST of Cmc11g0308291 vs. ExPASy TrEMBL
Match: A0A0S3R736 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G442300 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.8e-33
Identity = 70/81 (86.42%), Postives = 72/81 (88.89%), Query Frame = 0 

Query: 1  MSISSSLSSRQCPDCYAFRTGWNLLDKEFCYLKTVIVTTVVHQGFGRRLPCHQVTNFLDL 60
          MSIS SLS RQCPD YAFR G NL DKEF YL+TVIVT  VH+GFGRRLPCHQVTNFLDL
Sbjct: 1  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLDL 60

Query: 61 PALGRRQPPYMVLRLCGDLCF 82
          PALGRRQPPYMVLRLCGDLCF
Sbjct: 61 PALGRRQPPYMVLRLCGDLCF 81

The following BLAST results are available for this feature:
BLAST of Cmc11g0308291 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG4151867.15.4e-3488.89hypothetical protein ERO13_D04G096660v2, partial [Gossypium hirsutum][more]
TYH29308.17.1e-3487.65hypothetical protein ES288_A01G001200v1 [Gossypium darwinii][more]
KAG4109276.12.1e-3387.65hypothetical protein ERO13_1Z056500v2 [Gossypium hirsutum][more]
KAG2642311.16.0e-3383.95hypothetical protein PVAP13_2KG284596 [Panicum virgatum][more]
TYI40543.16.0e-3386.42hypothetical protein ES332_A02G170300v1 [Gossypium tomentosum][more]
BLAST of Cmc11g0308291 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q3BAI21.7e-3585.19Uncharacterized protein ORF91 OS=Phalaenopsis aphrodite subsp. formosana OX=3088... [more]
BLAST of Cmc11g0308291 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D2HGT33.4e-3487.65Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A01G001200v1 PE=... [more]
A0A5D2RJB32.9e-3386.42Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A02G170300v1 P... [more]
A0A5N6N5S83.8e-3386.42Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_25331 PE=4 SV=1[more]
A0A2G2W3563.8e-3386.42Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_18514 PE=4 SV=1[more]
A0A0S3R7363.8e-3386.42Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G... [more]
BLAST of Cmc11g0308291 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0308291.1Cmc11g0308291.1mRNA