Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTAATTTCCCATTCTTCTGTTCCTCTTGAATTTTGGCCTCACGCCTTCTCCACTGCAGTCTTTCTTATTAATCGAATGTCTTCTTCATCACTTAAAATGTTATCACCATTTGAAATGCTTTTTGGTTATACTCTTGATTTGCATTGTTTAAAAGTTTTTTTATGTGCATGTTACCCCATTCTCAAGCCTTACACCAAACACAAACTTGAACCAAAAACCACCCAACATGTATTTTTAGACTATCCTCATAGCTTCAAAGGCTATATTTGTTACAATCCATTAACCAAACAAACCATAGTTTCACGACATGTTATCTTTCATGAAACAATCTTTCCCTATGCAAATTCCACCACATTTTCTCCACCTCAATCCTTATCCATCTCTAATCCAAGCATACTACTCACCTTACTAAACATTCTACAATATACACCCTTAAATTCTGTTCCCATTCCCAATATCCAATCCCCACCTATTCACCCTCTCACTGTTGACATTACTTGCTCATCTTTTATGGATACTAATGGCACTTGTCAGTCTTTGAATGTTTCATCTACAATCGATACAGGAAATGAGATAAATGCTACTGCAACTAACTTACCTGATCCACCTCCTCCTCAAAATACTCATGCTATGCAAACTCAAGCAAAATCAGGTATTTTTAAGCCAAAGGCCTTTCACATTACAACTGCTCTCCCAACTTCCACATCATACACAGAAGCCTCCAAATATCCAAAATGGCAAATTGCGATGCATGAGGAATTCAATGCTCTTCAAGCACAAGGTACCTGGTCTTTAGTACCCTGA
mRNA sequence
ATGTCTCTAATTTCCCATTCTTCTGTTCCTCTTGAATTTTGGCCTCACGCCTTCTCCACTGCAGTCTTTCTTATTAATCGAATGTCTTCTTCATCACTTAAAATGTTATCACCATTTGAAATGCTTTTTGGTTATACTCTTGATTTGCATTGTTTAAAAGTTTTTTTATGTGCATGTTACCCCATTCTCAAGCCTTACACCAAACACAAACTTGAACCAAAAACCACCCAACATGTATTTTTAGACTATCCTCATAGCTTCAAAGGCTATATTTGTTACAATCCATTAACCAAACAAACCATAGTTTCACGACATGTTATCTTTCATGAAACAATCTTTCCCTATGCAAATTCCACCACATTTTCTCCACCTCAATCCTTATCCATCTCTAATCCAAGCATACTACTCACCTTACTAAACATTCTACAATATACACCCTTAAATTCTGTTCCCATTCCCAATATCCAATCCCCACCTATTCACCCTCTCACTGTTGACATTACTTGCTCATCTTTTATGGATACTAATGGCACTTGTCAGTCTTTGAATGTTTCATCTACAATCGATACAGGAAATGAGATAAATGCTACTGCAACTAACTTACCTGATCCACCTCCTCCTCAAAATACTCATGCTATGCAAACTCAAGCAAAATCAGGTATTTTTAAGCCAAAGGCCTTTCACATTACAACTGCTCTCCCAACTTCCACATCATACACAGAAGCCTCCAAATATCCAAAATGGCAAATTGCGATGCATGAGGAATTCAATGCTCTTCAAGCACAAGGTACCTGGTCTTTAGTACCCTGA
Coding sequence (CDS)
ATGTCTCTAATTTCCCATTCTTCTGTTCCTCTTGAATTTTGGCCTCACGCCTTCTCCACTGCAGTCTTTCTTATTAATCGAATGTCTTCTTCATCACTTAAAATGTTATCACCATTTGAAATGCTTTTTGGTTATACTCTTGATTTGCATTGTTTAAAAGTTTTTTTATGTGCATGTTACCCCATTCTCAAGCCTTACACCAAACACAAACTTGAACCAAAAACCACCCAACATGTATTTTTAGACTATCCTCATAGCTTCAAAGGCTATATTTGTTACAATCCATTAACCAAACAAACCATAGTTTCACGACATGTTATCTTTCATGAAACAATCTTTCCCTATGCAAATTCCACCACATTTTCTCCACCTCAATCCTTATCCATCTCTAATCCAAGCATACTACTCACCTTACTAAACATTCTACAATATACACCCTTAAATTCTGTTCCCATTCCCAATATCCAATCCCCACCTATTCACCCTCTCACTGTTGACATTACTTGCTCATCTTTTATGGATACTAATGGCACTTGTCAGTCTTTGAATGTTTCATCTACAATCGATACAGGAAATGAGATAAATGCTACTGCAACTAACTTACCTGATCCACCTCCTCCTCAAAATACTCATGCTATGCAAACTCAAGCAAAATCAGGTATTTTTAAGCCAAAGGCCTTTCACATTACAACTGCTCTCCCAACTTCCACATCATACACAGAAGCCTCCAAATATCCAAAATGGCAAATTGCGATGCATGAGGAATTCAATGCTCTTCAAGCACAAGGTACCTGGTCTTTAGTACCCTGA
Protein sequence
MSLISHSSVPLEFWPHAFSTAVFLINRMSSSSLKMLSPFEMLFGYTLDLHCLKVFLCACYPILKPYTKHKLEPKTTQHVFLDYPHSFKGYICYNPLTKQTIVSRHVIFHETIFPYANSTTFSPPQSLSISNPSILLTLLNILQYTPLNSVPIPNIQSPPIHPLTVDITCSSFMDTNGTCQSLNVSSTIDTGNEINATATNLPDPPPPQNTHAMQTQAKSGIFKPKAFHITTALPTSTSYTEASKYPKWQIAMHEEFNALQAQGTWSLVP
Homology
BLAST of Cmc11g0307901 vs. NCBI nr
Match:
KAA0045362.1 (putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 273.5 bits (698), Expect = 2.0e-69
Identity = 138/159 (86.79%), Postives = 145/159 (91.19%), Query Frame = 0
Query: 111 TIFPYANSTTFSPPQSLSISNPSILLTLLNILQYTPLNSVPIPNIQSPPIHPLTVDITCS 170
TIFPYANST SP QSLSISNPSILLTLLNI Q+TPLNS+ IPNIQS PI P TVDITCS
Sbjct: 50 TIFPYANSTNSSPSQSLSISNPSILLTLLNIPQHTPLNSILIPNIQSAPIRPPTVDITCS 109
Query: 171 SFMDTNGTCQSLNVSSTIDTGNEINATATNLPDPPPPQNTHAMQTQAKSGIFKPKAFHIT 230
SFMDTN TCQSLNVSST+DTGNEINAT NLPDPPPP+NTHAMQT+AKS IFKPKAFHIT
Sbjct: 110 SFMDTNATCQSLNVSSTVDTGNEINATTINLPDPPPPRNTHAMQTRAKSDIFKPKAFHIT 169
Query: 231 TALPTSTSYTEASKYPKWQIAMHEEFNALQAQGTWSLVP 270
TALPT TSYTEASKYP+W+ AMHEEFNALQAQGTWSLVP
Sbjct: 170 TALPTPTSYTEASKYPEWRTAMHEEFNALQAQGTWSLVP 208
BLAST of Cmc11g0307901 vs. NCBI nr
Match:
TYJ96936.1 (putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 184.5 bits (467), Expect = 1.2e-42
Identity = 88/97 (90.72%), Postives = 92/97 (94.85%), Query Frame = 0
Query: 173 MDTNGTCQSLNVSSTIDTGNEINATATNLPDPPPPQNTHAMQTQAKSGIFKPKAFHITTA 232
MDTN TCQSLNVSST+DTGNEINAT NLPDPPPP+NTHAMQT+AKSGIFKPKAFHITTA
Sbjct: 1 MDTNATCQSLNVSSTVDTGNEINATTINLPDPPPPRNTHAMQTRAKSGIFKPKAFHITTA 60
Query: 233 LPTSTSYTEASKYPKWQIAMHEEFNALQAQGTWSLVP 270
LPT TSYTEASKYP+WQ AMHEEFNALQAQGTWSLVP
Sbjct: 61 LPTPTSYTEASKYPEWQTAMHEEFNALQAQGTWSLVP 97
BLAST of Cmc11g0307901 vs. NCBI nr
Match:
PKU66571.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum])
HSP 1 Score: 180.6 bits (457), Expect = 1.7e-41
Identity = 116/273 (42.49%), Postives = 160/273 (58.61%), Query Frame = 0
Query: 2 SLISHSSVPLEFWPHAFSTAVFLINRMSSSSLKMLSPFEMLFGYTLDLHCLKVFLCACYP 61
+L+ +++P FW A STA +LINR+ + + + P++ ++G D L+ F C CYP
Sbjct: 506 TLLHEANLPHLFWAEALSTANYLINRLPTKACNLTIPYQTIYGTLPDYEHLRTFGCLCYP 565
Query: 62 ILKPYTKHKLEPKTTQHVFLDYPHSFKGYICYNPLTKQTIVSRHVIFHETIFPYANSTTF 121
L+P T +KL+P++ VFL Y S KGY CYN T++ +SRHVIFHET FPY N
Sbjct: 566 WLRPLTTNKLQPRSQDCVFLGYSSSQKGYRCYNLQTRKIHISRHVIFHETHFPYHN---L 625
Query: 122 SPPQSLSISNPSILLTLLNILQYTPLNSVPIPNIQSPPIHP-LTVDITCSSFMDTNGTCQ 181
SPP +S S P I +PL +P ++ PI+P L+ + SSF T
Sbjct: 626 SPPPPIS-SPPPI---------SSPLMLIPTSTLK--PIYPTLSPTHSSSSFPTHTSTES 685
Query: 182 SLNVSSTIDTGNEINATATNLPDPPPPQNTHAMQTQAKSGIFKPKAFH----ITTALPTS 241
SLN S TI T + T + P PPPPQ H M+T+ K+G KPK +TT+ T
Sbjct: 686 SLN-SPTISTS---SVTPSLSPTPPPPQ--HQMKTRFKTGNLKPKTIFDLSAVTTSNSTP 745
Query: 242 TSYTEASKYPKWQIAMHEEFNALQAQGTWSLVP 270
TSYT+A+K+P+W+ AM +EF ALQ Q TWSL P
Sbjct: 746 TSYTQANKFPQWREAMSKEFLALQKQSTWSLTP 757
BLAST of Cmc11g0307901 vs. NCBI nr
Match:
KAA0056830.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYJ99954.1 putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 177.2 bits (448), Expect = 1.9e-40
Identity = 98/141 (69.50%), Postives = 111/141 (78.72%), Query Frame = 0
Query: 123 PPQSLSISNPSILLTLLNILQYTPLNSVPIPNIQSPPIHPLTVDITCSSFM-DTNGTCQS 182
P QS+S S+ SILLTLLNI +TP I NIQSPP +P VDIT SSF+ +TN T QS
Sbjct: 15 PSQSISNSDSSILLTLLNIPHHTPSPFASISNIQSPPPNPPAVDITYSSFITNTNATSQS 74
Query: 183 LNVSSTIDTGNEINATATNLPDPPPPQNTHAMQTQAKSGIFKPKAFHITTALPTSTSYTE 242
LNVSST++ N+INA TN+ PPPP+NTH MQT+ KSGIFKPKAFHITTALPT TSYTE
Sbjct: 75 LNVSSTVNIRNDINAATTNIHVPPPPRNTHTMQTREKSGIFKPKAFHITTALPTPTSYTE 134
Query: 243 ASKYPKWQIAMHEEFNALQAQ 263
ASKYPKW AM EEF+ALQAQ
Sbjct: 135 ASKYPKWCTAMCEEFDALQAQ 155
BLAST of Cmc11g0307901 vs. NCBI nr
Match:
KAA0066360.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK00923.1 putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 177.2 bits (448), Expect = 1.9e-40
Identity = 84/97 (86.60%), Postives = 90/97 (92.78%), Query Frame = 0
Query: 173 MDTNGTCQSLNVSSTIDTGNEINATATNLPDPPPPQNTHAMQTQAKSGIFKPKAFHITTA 232
MDTN TCQSLN+SS +DTGNEINAT NLPDPPP +NTHAMQT+AKSGIFKPKAFHITTA
Sbjct: 1 MDTNATCQSLNISSIVDTGNEINATTINLPDPPPSRNTHAMQTRAKSGIFKPKAFHITTA 60
Query: 233 LPTSTSYTEASKYPKWQIAMHEEFNALQAQGTWSLVP 270
LPT TSYTEASKYP+W+ AMHEEFNALQAQGTWSLVP
Sbjct: 61 LPTPTSYTEASKYPEWRTAMHEEFNALQAQGTWSLVP 97
BLAST of Cmc11g0307901 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 119.4 bits (298), Expect = 6.3e-26
Identity = 85/255 (33.33%), Postives = 136/255 (53.33%), Query Frame = 0
Query: 1 MSLISHSSVPLEFWPHAFSTAVFLINRMSSSSLKMLSPFEMLFGYTLDLHCLKVFLCACY 60
++L+SH+S+P +WP+AF+ AV+LINR+ + L++ SPF+ LFG + + L+VF CACY
Sbjct: 637 LTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACY 696
Query: 61 PILKPYTKHKLEPKTTQHVFLDYPHSFKGYICYNPLTKQTIVSRHVIFHETIFPYAN-ST 120
P L+PY +HKL+ K+ Q VFL Y + Y+C + T + +SRHV F E FP++N
Sbjct: 697 PWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLA 756
Query: 121 TFSPPQSLSISNPSILLTLLNILQYTPLNSVPIPNIQSPPIHPLTVDITCSS-FMDTNGT 180
T SP Q + + + TP+ +P P+ S P H T + S+ F ++ +
Sbjct: 757 TLSPVQEQRRESSCVWSPHTTLPTRTPV--LPAPSC-SDPHHAATPPSSPSAPFRNSQVS 816
Query: 181 CQSL--NVSSTIDTGNEINATATNLPDP--PPPQ---NTHAMQTQAKSGIFKPKAFHITT 240
+L + SS+ + E A N P P P Q TH+ Q +++ +
Sbjct: 817 SSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQ 876
Query: 241 ALPTSTSYTEASKYP 247
+L T + +S P
Sbjct: 877 SLSTPAQSSSSSPSP 888
BLAST of Cmc11g0307901 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 114.8 bits (286), Expect = 1.5e-24
Identity = 75/218 (34.40%), Postives = 114/218 (52.29%), Query Frame = 0
Query: 1 MSLISHSSVPLEFWPHAFSTAVFLINRMSSSSLKMLSPFEMLFGYTLDLHCLKVFLCACY 60
++L+SH+SVP +WP+AFS AV+LINR+ + L++ SPF+ LFG + LKVF CACY
Sbjct: 616 LTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACY 675
Query: 61 PILKPYTKHKLEPKTTQHVFLDYPHSFKGYICYNPLTKQTIVSRHVIFHETIFPYANS-- 120
P L+PY +HKLE K+ Q F+ Y + Y+C + T + SRHV F E FP++ +
Sbjct: 676 PWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNF 735
Query: 121 --TTFSPPQSLSISNPSILLTLLNILQYTPLNSVPIPNIQSPPIHPLTVDITCSSFMDTN 180
+T +S S N TL P P++ + P P + C++ + ++
Sbjct: 736 GVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSS 795
Query: 181 GTCQSLNVSSTIDTGNEINATATNLPDPPPPQNTHAMQ 215
SS+I + + TA + P P H Q
Sbjct: 796 NL-----PSSSISSPSSSEPTAPSHNGPQPTAQPHQTQ 828
BLAST of Cmc11g0307901 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 58.2 bits (139), Expect = 1.7e-07
Identity = 34/110 (30.91%), Postives = 54/110 (49.09%), Query Frame = 0
Query: 2 SLISHSSVPLEFWPHAFSTAVFLINRMSSSSLKMLSPFEMLFGYTLDLHCLKVFLCACYP 61
S++ + +P FW A TA +LINR S L P + + LKVF C +
Sbjct: 598 SMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFA 657
Query: 62 ILKPYTKHKLEPKTTQHVFLDYPHSFKGYICYNPLTKQTIVSRHVIFHET 112
+ + KL+ K+ +F+ Y GY ++P+ K+ I SR V+F E+
Sbjct: 658 HVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRES 707
BLAST of Cmc11g0307901 vs. ExPASy TrEMBL
Match:
A0A5A7TPR4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001410 PE=4 SV=1)
HSP 1 Score: 273.5 bits (698), Expect = 9.6e-70
Identity = 138/159 (86.79%), Postives = 145/159 (91.19%), Query Frame = 0
Query: 111 TIFPYANSTTFSPPQSLSISNPSILLTLLNILQYTPLNSVPIPNIQSPPIHPLTVDITCS 170
TIFPYANST SP QSLSISNPSILLTLLNI Q+TPLNS+ IPNIQS PI P TVDITCS
Sbjct: 50 TIFPYANSTNSSPSQSLSISNPSILLTLLNIPQHTPLNSILIPNIQSAPIRPPTVDITCS 109
Query: 171 SFMDTNGTCQSLNVSSTIDTGNEINATATNLPDPPPPQNTHAMQTQAKSGIFKPKAFHIT 230
SFMDTN TCQSLNVSST+DTGNEINAT NLPDPPPP+NTHAMQT+AKS IFKPKAFHIT
Sbjct: 110 SFMDTNATCQSLNVSSTVDTGNEINATTINLPDPPPPRNTHAMQTRAKSDIFKPKAFHIT 169
Query: 231 TALPTSTSYTEASKYPKWQIAMHEEFNALQAQGTWSLVP 270
TALPT TSYTEASKYP+W+ AMHEEFNALQAQGTWSLVP
Sbjct: 170 TALPTPTSYTEASKYPEWRTAMHEEFNALQAQGTWSLVP 208
BLAST of Cmc11g0307901 vs. ExPASy TrEMBL
Match:
A0A2N9GDM9 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25223 PE=4 SV=1)
HSP 1 Score: 192.6 bits (488), Expect = 2.1e-45
Identity = 120/297 (40.40%), Postives = 169/297 (56.90%), Query Frame = 0
Query: 1 MSLISHSSVPLEFWPHAFSTAVFLINRMSSSSLKMLSPFEMLFGYTLDLHCLKVFLCACY 60
++++S S +P+ +W HA STA LINR+ + +L +P+E+LF DL L+ F C C+
Sbjct: 664 LAILSESKLPMSYWSHAVSTATHLINRLPTPNLSYNNPWELLFQKPPDLTYLRSFGCQCF 723
Query: 61 PILKPYTKHKLEPKTTQHVFLDYPHSFKGYICYNPLTKQTIVSRHVIFHETIFP-YANST 120
P+L PYT HKL PKTT VF+ YP KGY+C +P+TK+ VSRHV+F+ETIFP +ST
Sbjct: 724 PLLTPYTAHKLHPKTTPCVFIGYPTHTKGYLCLDPITKRLYVSRHVLFNETIFPGLTHST 783
Query: 121 TFSPPQSLSISNPSILLTLL---NILQYTP---------------LNSVPIPNIQSPPIH 180
+ I +P+ +T + + +TP S+P+P SP
Sbjct: 784 NALHSSATHIISPNTWMTTIPSSHTCSHTPPLPTLPTESNTASPTNTSLPLPLPNSPLPS 843
Query: 181 PLTVDITCSSFMDTNGTCQS-LNVSSTIDTGNEINATATNLPD-----PPPPQNTHAMQT 240
P + + SS +++ + S + +T T + T T LP P P NTH MQT
Sbjct: 844 PFSSAESHSSSAESHSSPTSPTPIPATSPTPIPTSITLTTLPTPSLPVPSVPPNTHPMQT 903
Query: 241 QAKSGIFKPK---AFHITTALPTSTSYTEASKYPKWQIAMHEEFNALQAQGTWSLVP 270
++K+GIFKPK A H L T+Y ASK+P+W AM EEF ALQ QGTW+LVP
Sbjct: 904 RSKNGIFKPKLGYAAHTDYTLTKPTTYATASKHPQWCNAMDEEFEALQKQGTWTLVP 960
BLAST of Cmc11g0307901 vs. ExPASy TrEMBL
Match:
A0A2N9GRJ0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30097 PE=4 SV=1)
HSP 1 Score: 191.0 bits (484), Expect = 6.3e-45
Identity = 121/281 (43.06%), Postives = 171/281 (60.85%), Query Frame = 0
Query: 1 MSLISHSSVPLEFWPHAFSTAVFLINRMSSSSLKMLSPFEMLFGYTLDLHCLKVFLCACY 60
++LIS SS+PL++WP+AFSTA++LINRM + +LK SP+++LF D LK F C C+
Sbjct: 705 LTLISESSLPLQYWPYAFSTAIYLINRMPTPNLKFTSPWQLLFHTNPDYSFLKTFGCLCF 764
Query: 61 PILKPYTKHKLEPKTTQHVFLDYPHSFKGYICYNPLTKQTIVSRHVIFHETIFPYANSTT 120
P+L+PY KHKLEP+++ VFL Y + KGY+C N T + ++SRHV FHE FP+ + T+
Sbjct: 765 PLLRPYNKHKLEPRSSPCVFLGYALNAKGYLCLNLQTHKLLISRHVAFHENSFPFKSQTS 824
Query: 121 FSPPQSLSISNPSILLTLLNILQYTPLNSVPIPNIQSPP--IHPLTVDITCSSFMDTNGT 180
S S S PS L ++L + P + P+I PP + PL+ SS + + +
Sbjct: 825 PS-----SCSTPS-NTWLSSVLYFHPCTA---PSILGPPPSLPPLSGSTPLSSSL-PDVS 884
Query: 181 CQSLNVSSTIDTGNEINAT----ATNLPDPP--PPQNTHAMQTQAKSGIFKPK-AFHITT 240
Q+ S + T + + + + ++P P PP N+H MQT+ KSGI K K H T
Sbjct: 885 AQTEPPSPLLHTTSSPHISCPVPSCSVPSGPILPPINSHPMQTRGKSGISKRKLLLHTKT 944
Query: 241 ALPTST---SYTEASKYPKWQIAMHEEFNALQAQGTWSLVP 270
P T SY ASKYP+WQ AM +E+ ALQ Q TWSLVP
Sbjct: 945 LNPLETEPPSYKVASKYPEWQSAMLDEYTALQRQQTWSLVP 975
BLAST of Cmc11g0307901 vs. ExPASy TrEMBL
Match:
A0A2N9FMC6 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16294 PE=4 SV=1)
HSP 1 Score: 191.0 bits (484), Expect = 6.3e-45
Identity = 121/281 (43.06%), Postives = 171/281 (60.85%), Query Frame = 0
Query: 1 MSLISHSSVPLEFWPHAFSTAVFLINRMSSSSLKMLSPFEMLFGYTLDLHCLKVFLCACY 60
++LIS SS+PL++WP+AFSTA++LINRM + +LK SP+++LF D LK F C C+
Sbjct: 532 LTLISESSLPLQYWPYAFSTAIYLINRMPTPNLKFTSPWQLLFHTNPDYSFLKTFGCLCF 591
Query: 61 PILKPYTKHKLEPKTTQHVFLDYPHSFKGYICYNPLTKQTIVSRHVIFHETIFPYANSTT 120
P+L+PY KHKLEP+++ VFL Y + KGY+C N T + ++SRHV FHE FP+ + T+
Sbjct: 592 PLLRPYNKHKLEPRSSPCVFLGYALNAKGYLCLNLQTHKLLISRHVAFHENSFPFKSQTS 651
Query: 121 FSPPQSLSISNPSILLTLLNILQYTPLNSVPIPNIQSPP--IHPLTVDITCSSFMDTNGT 180
S S S PS L ++L + P + P+I PP + PL+ SS + + +
Sbjct: 652 PS-----SCSTPS-NTWLSSVLYFHPCTA---PSILGPPPSLPPLSGSTPLSSSL-PDVS 711
Query: 181 CQSLNVSSTIDTGNEINAT----ATNLPDPP--PPQNTHAMQTQAKSGIFKPK-AFHITT 240
Q+ S + T + + + + ++P P PP N+H MQT+ KSGI K K H T
Sbjct: 712 AQTEPPSPLLHTTSSPHISCPVPSCSVPSGPILPPINSHPMQTRGKSGISKRKLLLHTKT 771
Query: 241 ALPTST---SYTEASKYPKWQIAMHEEFNALQAQGTWSLVP 270
P T SY ASKYP+WQ AM +E+ ALQ Q TWSLVP
Sbjct: 772 LNPLETEPPSYKVASKYPEWQSAMLDEYTALQRQQTWSLVP 802
BLAST of Cmc11g0307901 vs. ExPASy TrEMBL
Match:
A0A2N9ISJ0 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55704 PE=4 SV=1)
HSP 1 Score: 190.7 bits (483), Expect = 8.2e-45
Identity = 119/275 (43.27%), Postives = 160/275 (58.18%), Query Frame = 0
Query: 1 MSLISHSSVPLEFWPHAFSTAVFLINRMSSSSLKMLSPFEMLFGYTLDLHCLKVFLCACY 60
++L+SH+S+P+ W HA +TA+ LINR+ + L SP+EMLF DL LK F C C+
Sbjct: 582 ITLLSHASLPITHWSHAVTTAIHLINRIPTPKLTHKSPWEMLFHKPPDLTHLKTFGCMCF 641
Query: 61 PILKPYTKHKLEPKTTQHVFLDYPHSFKGYICYNPLTKQTIVSRHVIFHETIFPYANSTT 120
P L+PY HKL+P+TT +FL YP KGYIC +P T +T +SRHV+F+E+ F ++S
Sbjct: 642 PYLRPYNTHKLQPRTTPCLFLGYPPHSKGYICLDPKTNRTYISRHVLFNESEFLSSSSLK 701
Query: 121 FSPPQSLS--ISNPSILLTLLNILQYTPLNSVPIPNIQSPPIHPLTVDITCSSFMDTNGT 180
+ P S S S ++ L +I T +S + SP H S + N
Sbjct: 702 STSPASSSPVTSTFDLVPWLSDIPTLTQTSSPTDQEVSSPITH---------SPHEPNSP 761
Query: 181 CQSLNVSSTIDTGNEINATATNLP-DPPPPQNTHAMQTQAKSGIFKPKAFHITTALPTST 240
SL + STI + +LP P P NTH M T++K GIFKPK+FH TT T T
Sbjct: 762 SASLPIESTI-------VPSASLPIAPSAPVNTHPMNTRSKHGIFKPKSFHTTTTDYTHT 821
Query: 241 ---SYTEASKYPKWQIAMHEEFNALQAQGTWSLVP 270
+Y ASK+P+W AM EEF+ALQ Q TWSLVP
Sbjct: 822 EPPTYQIASKFPQWCSAMDEEFSALQRQQTWSLVP 840
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0045362.1 | 2.0e-69 | 86.79 | putative mitochondrial protein [Cucumis melo var. makuwa] | [more] |
TYJ96936.1 | 1.2e-42 | 90.72 | putative mitochondrial protein [Cucumis melo var. makuwa] | [more] |
PKU66571.1 | 1.7e-41 | 42.49 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatu... | [more] |
KAA0056830.1 | 1.9e-40 | 69.50 | putative mitochondrial protein [Cucumis melo var. makuwa] >TYJ99954.1 putative m... | [more] |
KAA0066360.1 | 1.9e-40 | 86.60 | putative mitochondrial protein [Cucumis melo var. makuwa] >TYK00923.1 putative m... | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 6.3e-26 | 33.33 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.5e-24 | 34.40 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P10978 | 1.7e-07 | 30.91 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7TPR4 | 9.6e-70 | 86.79 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... | [more] |
A0A2N9GDM9 | 2.1e-45 | 40.40 | Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... | [more] |
A0A2N9GRJ0 | 6.3e-45 | 43.06 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30097 PE=4 SV=1 | [more] |
A0A2N9FMC6 | 6.3e-45 | 43.06 | Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... | [more] |
A0A2N9ISJ0 | 8.2e-45 | 43.27 | Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... | [more] |
Match Name | E-value | Identity | Description | |