Cmc11g0306651 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0306651
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
LocationCMiso1.1chr11: 28193901 .. 28194559 (-)
RNA-Seq ExpressionCmc11g0306651
SyntenyCmc11g0306651
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGTTAACAATAGCTTTTATGAAAGGATGGGTTATTAAACAACTTGATGTTAATAATGCCTTTTTACATGGTAAATTAGAAGAAGATGTATACATGGAACAACCTTATGGTTTTGAAACAAAAGCTTCTCGTCCTCTTGTTTGTCATCTACAAAAAGCTATTTATGGACTAAAACAAGCATCCCGAGCATGGTATGAAAAGCTAAGTTCTAGTTTACATAACTTAGGCTTTCGGACATCCAAAGCAGACTCATCTCTCTTAATTCGTATCAATTCTACTTCATGTTGTTATATTTTGGTCTATGTTGATGTTTTATCATTATGGGAGATTCTGAAAAGATTTTAAATGATCTAATTAAAGCTTTGAACAAGGCATTTGCTCTTAAAGACCTTGGAGCCCTTAGTTATTTCCTTGGAGTAGAGGTATCGTATCCTACAAATGGAGGTATGTTCTTATCCCAAGTAAAATATATTACTGATCTATTGCAGAAGACGAAAATGATTGAAGCAAAACCTATTTCAACTTCAATGGTAAGTGGACAGTTAGTATTTGCTCATCAAGGTGAAAATTTTCATGATGTATACTTGTACCGTAGTACTGTTGGAGCTTTACAGTATGCTACTCTTACACATCTTGAAATATCTAAGTGTAAATAA

mRNA sequence

ATGCTGTTAACAATAGCTTTTATGAAAGGATGGGTTATTAAACAACTTGATGTTAATAATGCCTTTTTACATGGTAAATTAGAAGAAGATGTATACATGGAACAACCTTATGGTTTTGAAACAAAAGCTTCTCGTCCTCTTGTTTGTCATCTACAAAAAGCTATTTATGGACTAAAACAAGCATCCCGAGCATGGTATGAAAAGCTAAGTTCTAGTTTACATAACTTAGGCTTTCGGACATCCAAAGCAGACTCATCTCTCTTAATTCGTATCAATTCTACTTCATGTTGTTATATTTTGATTTTAAATGATCTAATTAAAGCTTTGAACAAGGCATTTGCTCTTAAAGACCTTGGAGCCCTTAGTTATTTCCTTGGAGTAGAGGTATCGTATCCTACAAATGGAGGTATGTTCTTATCCCAAGTAAAATATATTACTGATCTATTGCAGAAGACGAAAATGATTGAAGCAAAACCTATTTCAACTTCAATGGTAAGTGGACAGTTAGTATTTGCTCATCAAGGTGAAAATTTTCATGATGTATACTTGTACCGTAGTACTGTTGGAGCTTTACAGTATGCTACTCTTACACATCTTGAAATATCTAAGTGTAAATAA

Coding sequence (CDS)

ATGCTGTTAACAATAGCTTTTATGAAAGGATGGGTTATTAAACAACTTGATGTTAATAATGCCTTTTTACATGGTAAATTAGAAGAAGATGTATACATGGAACAACCTTATGGTTTTGAAACAAAAGCTTCTCGTCCTCTTGTTTGTCATCTACAAAAAGCTATTTATGGACTAAAACAAGCATCCCGAGCATGGTATGAAAAGCTAAGTTCTAGTTTACATAACTTAGGCTTTCGGACATCCAAAGCAGACTCATCTCTCTTAATTCGTATCAATTCTACTTCATGTTGTTATATTTTGATTTTAAATGATCTAATTAAAGCTTTGAACAAGGCATTTGCTCTTAAAGACCTTGGAGCCCTTAGTTATTTCCTTGGAGTAGAGGTATCGTATCCTACAAATGGAGGTATGTTCTTATCCCAAGTAAAATATATTACTGATCTATTGCAGAAGACGAAAATGATTGAAGCAAAACCTATTTCAACTTCAATGGTAAGTGGACAGTTAGTATTTGCTCATCAAGGTGAAAATTTTCATGATGTATACTTGTACCGTAGTACTGTTGGAGCTTTACAGTATGCTACTCTTACACATCTTGAAATATCTAAGTGTAAATAA

Protein sequence

MLLTIAFMKGWVIKQLDVNNAFLHGKLEEDVYMEQPYGFETKASRPLVCHLQKAIYGLKQASRAWYEKLSSSLHNLGFRTSKADSSLLIRINSTSCCYILILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEISKCK
Homology
BLAST of Cmc11g0306651 vs. NCBI nr
Match: KAA0052371.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK09417.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 302.0 bits (772), Expect = 4.0e-78
Identity = 154/216 (71.30%), Postives = 174/216 (80.56%), Query Frame = 0

Query: 1   MLLTIAFMKGWVIKQLDVNNAFLHGKLEEDVYMEQPYGFETKASRPLVCHLQKAIYGLKQ 60
           MLLTIA MKGW I+QLDVNNAFLHG L+E+VYMEQ +GFE K+S P+VCHL+KA+YGLKQ
Sbjct: 77  MLLTIAIMKGWSIRQLDVNNAFLHGNLDENVYMEQIFGFEVKSSYPMVCHLKKALYGLKQ 136

Query: 61  ASRAWYEKLSSSLHNLGFRTSKADSSLLIRINSTSCCYILI--------------LNDLI 120
           A RAWYE LS  LH+LGFRTSKAD+SLLIR+  TSCCY LI              +N L+
Sbjct: 137 APRAWYENLSLGLHSLGFRTSKADTSLLIRVTPTSCCYALIYVDDLIIMGSSKKDVNSLV 196

Query: 121 KALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVS 180
            +LN  FALKDLG LSYFLGVEVSYPTNG +FLSQ KYITDLLQ+TKM++AKPIST MVS
Sbjct: 197 HSLNSQFALKDLGKLSYFLGVEVSYPTNGDLFLSQSKYITDLLQRTKMLDAKPISTPMVS 256

Query: 181 GQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEIS 203
           G L+ A QGE FHDV+L RS VGALQYATLTH EIS
Sbjct: 257 GPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEIS 292

BLAST of Cmc11g0306651 vs. NCBI nr
Match: XP_016903382.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 208.8 bits (530), Expect = 4.6e-50
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0

Query: 101 ILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPI 160
           ILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPI
Sbjct: 7   ILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPI 66

Query: 161 STSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEISKCK 206
           STSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEISKCK
Sbjct: 67  STSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEISKCK 111

BLAST of Cmc11g0306651 vs. NCBI nr
Match: RVX14937.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 201.8 bits (512), Expect = 5.6e-48
Identity = 106/216 (49.07%), Postives = 143/216 (66.20%), Query Frame = 0

Query: 1    MLLTIAFMKGWVIKQLDVNNAFLHGKLEEDVYMEQPYGFETKASRPLVCHLQKAIYGLKQ 60
            ++ TIA  + W IKQLDVNNAFL+G L+E+V+M+QP GF  + +  LVC L KA+YGLKQ
Sbjct: 986  VVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFIDEKNPNLVCRLHKALYGLKQ 1045

Query: 61   ASRAWYEKLSSSLHNLGFRTSKADSSLLIRINSTSCCYILI--------------LNDLI 120
            A RAW+EKL  +L + GF ++K+D SL +R   +   Y+L+              +  LI
Sbjct: 1046 APRAWFEKLHQALLSFGFVSAKSDQSLFLRFTPSHITYVLVYVDDILVIGSDTTTITSLI 1105

Query: 121  KALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVS 180
              LN  F+LKDLG + YFLG++VS+ TN G+ LSQ KYI DLLQKTKM+  KP  T + +
Sbjct: 1106 AQLNSEFSLKDLGEVHYFLGIQVSH-TNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLPT 1165

Query: 181  GQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEIS 203
            G  + A  G+   D++ YRSTVGALQY T+T  E+S
Sbjct: 1166 GLKLRAGDGDPVDDLHGYRSTVGALQYVTITRPELS 1200

BLAST of Cmc11g0306651 vs. NCBI nr
Match: XP_016163061.1 (uncharacterized protein LOC107605630 [Arachis ipaensis])

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-47
Identity = 103/216 (47.69%), Postives = 143/216 (66.20%), Query Frame = 0

Query: 1    MLLTIAFMKGWVIKQLDVNNAFLHGKLEEDVYMEQPYGFETKASRPLVCHLQKAIYGLKQ 60
            ++L+IA  +GW ++Q D NNAFL+G LEE+V+M QP GF + A    VCHLQ+++YGLKQ
Sbjct: 1172 VVLSIALARGWKVRQYDFNNAFLNGDLEEEVFMSQPEGFISSAYPHHVCHLQRSLYGLKQ 1231

Query: 61   ASRAWYEKLSSSLHNLGFRTSKADSSLLIRINSTSCCYILI--------------LNDLI 120
            A RAW+ KL  +LH+ GF+ +++D++L  ++ +TS  +IL+              + +L+
Sbjct: 1232 APRAWFTKLKHTLHSFGFQNTRSDTTLFTKLTATSATFILVYVDDILITGSSDSEIQNLV 1291

Query: 121  KALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVS 180
            K L+  F+LKDLG +SYFLG+EV    +  + LSQ KY+TDLL K  M  AKP+ T M S
Sbjct: 1292 KQLHSTFSLKDLGEMSYFLGIEVVRHHDAEIHLSQTKYVTDLLHKAGMPNAKPMPTPMTS 1351

Query: 181  GQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEIS 203
            G  + AH GE F    LYRS VG LQYAT+T  EIS
Sbjct: 1352 GLKLSAHGGEPFSKPALYRSLVGGLQYATITRPEIS 1387

BLAST of Cmc11g0306651 vs. NCBI nr
Match: RVW44519.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-47
Identity = 107/218 (49.08%), Postives = 145/218 (66.51%), Query Frame = 0

Query: 1    MLLTIAFMKGWVIKQLDVNNAFLHGKLEEDVYMEQPYGFE--TKASRPLVCHLQKAIYGL 60
            ++L IA  + W I+QLDVNNAFL+G+L+E+VYM+QP GF+  T   + LVC L KA+YGL
Sbjct: 1045 VVLAIAVSQSWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGL 1104

Query: 61   KQASRAWYEKLSSSLHNLGFRTSKADSSLLIRINSTSCCYILI--------------LND 120
            KQA RAW++KL  SL   GF ++K+D SL +R  + S  ++L+              +++
Sbjct: 1105 KQAPRAWFDKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHE 1164

Query: 121  LIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSM 180
            LI  L   F+LKDLG LSYFLG+EV    +GG+ LSQ KYI DLL+KTKM  AK + T M
Sbjct: 1165 LISRLRGLFSLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPTPM 1224

Query: 181  VSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEIS 203
            +SG  + A  G+   +V+ YRS VGALQY T+T  EI+
Sbjct: 1225 LSGLKLSAGMGDPIDNVFEYRSVVGALQYITITRPEIA 1262

BLAST of Cmc11g0306651 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-36
Identity = 92/217 (42.40%), Postives = 125/217 (57.60%), Query Frame = 0

Query: 1    MLLTIAFMKGWVIKQLDVNNAFLHGKLEEDVYMEQPYGFETKASRPLVCHLQKAIYGLKQ 60
            ++L +A  + W I+QLDVNNAFL G L +DVYM QP GF  K     VC L+KA+YGLKQ
Sbjct: 1049 IVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQ 1108

Query: 61   ASRAWYEKLSSSLHNLGFRTSKADSSLLIRINSTSCCYILI--------------LNDLI 120
            A RAWY +L + L  +GF  S +D+SL +     S  Y+L+              L++ +
Sbjct: 1109 APRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTL 1168

Query: 121  KALNKAFALKDLGALSYFLGVEVS-YPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMV 180
              L++ F++KD   L YFLG+E    PT  G+ LSQ +YI DLL +T MI AKP++T M 
Sbjct: 1169 DNLSQRFSVKDHEELHYFLGIEAKRVPT--GLHLSQRRYILDLLARTNMITAKPVTTPMA 1228

Query: 181  SGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEIS 203
                +  + G    D   YR  VG+LQY   T  +IS
Sbjct: 1229 PSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDIS 1263

BLAST of Cmc11g0306651 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.6e-36
Identity = 88/216 (40.74%), Postives = 122/216 (56.48%), Query Frame = 0

Query: 1    MLLTIAFMKGWVIKQLDVNNAFLHGKLEEDVYMEQPYGFETKASRPLVCHLQKAIYGLKQ 60
            ++L +A  + W I+QLDVNNAFL G L ++VYM QP GF  K     VC L+KAIYGLKQ
Sbjct: 1032 IVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQ 1091

Query: 61   ASRAWYEKLSSSLHNLGFRTSKADSSLLIRINSTSCCYILI--------------LNDLI 120
            A RAWY +L + L  +GF  S +D+SL +     S  Y+L+              L   +
Sbjct: 1092 APRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTL 1151

Query: 121  KALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVS 180
             AL++ F++K+   L YFLG+E       G+ LSQ +Y  DLL +T M+ AKP++T M +
Sbjct: 1152 DALSQRFSVKEHEDLHYFLGIEAKRVPQ-GLHLSQRRYTLDLLARTNMLTAKPVATPMAT 1211

Query: 181  GQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEIS 203
               +  H G    D   YR  VG+LQY   T  ++S
Sbjct: 1212 SPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLS 1246

BLAST of Cmc11g0306651 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.4e-24
Identity = 78/217 (35.94%), Postives = 118/217 (54.38%), Query Frame = 0

Query: 2    LLTIAFMKGWVIKQLDVNNAFLHGKLEEDVYMEQPYGFETKASRPLVCHLQKAIYGLKQA 61
            +L++A      ++QLDV  AFLHG LEE++YMEQP GFE    + +VC L K++YGLKQA
Sbjct: 907  ILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQA 966

Query: 62   SRAWYEKLSSSLHNLGFRTSKADSSLLIRINSTSCCYILIL--NDLIKA----------- 121
             R WY K  S + +  +  + +D  +  +  S +   IL+L  +D++             
Sbjct: 967  PRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLK 1026

Query: 122  --LNKAFALKDLGALSYFLGVE-VSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMV 181
              L+K+F +KDLG     LG++ V   T+  ++LSQ KYI  +L++  M  AKP+ST + 
Sbjct: 1027 GDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPL- 1086

Query: 182  SGQLVFA--------HQGENFHDVYLYRSTVGALQYA 195
            +G L  +         +  N   V  Y S VG+L YA
Sbjct: 1087 AGHLKLSKKMCPTTVEEKGNMAKV-PYSSAVGSLMYA 1121

BLAST of Cmc11g0306651 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 3.7e-18
Identity = 57/196 (29.08%), Postives = 99/196 (50.51%), Query Frame = 0

Query: 16  LDVNNAFLHGKLEEDVYMEQPYGFETKASRPLVCHLQKAIYGLKQASRAWYEKLSSSLHN 75
           +DV+ AFL+  ++E +Y++QP GF  + +   V  L   +YGLKQA   W E ++++L  
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 76  LGFRTSKADSSLLIRINSTSCCYILI-LNDLIKA-------------LNKAFALKDLGAL 135
           +GF   + +  L  R  S    YI + ++DL+ A             L K +++KDLG +
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 136 SYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVSGQLVFAHQGENFHDV 195
             FLG+ +   +NG + LS   YI     ++++   K   T + + + +F     +  D+
Sbjct: 121 DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 196 YLYRSTVGALQYATLT 198
             Y+S VG L +   T
Sbjct: 181 TPYQSIVGQLLFCANT 196

BLAST of Cmc11g0306651 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 89.0 bits (219), Expect = 6.9e-17
Identity = 62/214 (28.97%), Postives = 102/214 (47.66%), Query Frame = 0

Query: 2    LLTIAFMKGWVIKQLDVNNAFLHGKLEEDVYMEQPYGFETKASRPLVCHLQKAIYGLKQA 61
            +L++       + Q+DV  AFL+G L+E++YM  P G    +    VC L KAIYGLKQA
Sbjct: 987  ILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSDN--VCKLNKAIYGLKQA 1046

Query: 62   SRAWYEKLSSSLHNLGFRTSKADSSLLI--RINSTSCCYILI--------------LNDL 121
            +R W+E    +L    F  S  D  + I  + N     Y+L+              +N+ 
Sbjct: 1047 ARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNF 1106

Query: 122  IKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPIST--- 181
             + L + F + DL  + +F+G+ +    +  ++LSQ  Y+  +L K  M     +ST   
Sbjct: 1107 KRYLMEKFRMTDLNEIKHFIGIRIEMQED-KIYLSQSAYVKKILSKFNMENCNAVSTPLP 1166

Query: 182  SMVSGQLVFAHQGENFHDVYLYRSTVGALQYATL 197
            S ++ +L+ + +  N       RS +G L Y  L
Sbjct: 1167 SKINYELLNSDEDCNTP----CRSLIGCLMYIML 1193

BLAST of Cmc11g0306651 vs. ExPASy TrEMBL
Match: A0A5A7UFS3 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold504G00520 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.9e-78
Identity = 154/216 (71.30%), Postives = 174/216 (80.56%), Query Frame = 0

Query: 1   MLLTIAFMKGWVIKQLDVNNAFLHGKLEEDVYMEQPYGFETKASRPLVCHLQKAIYGLKQ 60
           MLLTIA MKGW I+QLDVNNAFLHG L+E+VYMEQ +GFE K+S P+VCHL+KA+YGLKQ
Sbjct: 77  MLLTIAIMKGWSIRQLDVNNAFLHGNLDENVYMEQIFGFEVKSSYPMVCHLKKALYGLKQ 136

Query: 61  ASRAWYEKLSSSLHNLGFRTSKADSSLLIRINSTSCCYILI--------------LNDLI 120
           A RAWYE LS  LH+LGFRTSKAD+SLLIR+  TSCCY LI              +N L+
Sbjct: 137 APRAWYENLSLGLHSLGFRTSKADTSLLIRVTPTSCCYALIYVDDLIIMGSSKKDVNSLV 196

Query: 121 KALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVS 180
            +LN  FALKDLG LSYFLGVEVSYPTNG +FLSQ KYITDLLQ+TKM++AKPIST MVS
Sbjct: 197 HSLNSQFALKDLGKLSYFLGVEVSYPTNGDLFLSQSKYITDLLQRTKMLDAKPISTPMVS 256

Query: 181 GQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEIS 203
           G L+ A QGE FHDV+L RS VGALQYATLTH EIS
Sbjct: 257 GPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEIS 292

BLAST of Cmc11g0306651 vs. ExPASy TrEMBL
Match: A0A1S4E584 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107992154 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 2.2e-50
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0

Query: 101 ILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPI 160
           ILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPI
Sbjct: 7   ILNDLIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPI 66

Query: 161 STSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEISKCK 206
           STSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEISKCK
Sbjct: 67  STSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEISKCK 111

BLAST of Cmc11g0306651 vs. ExPASy TrEMBL
Match: A0A438K147 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2516 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.7e-48
Identity = 106/216 (49.07%), Postives = 143/216 (66.20%), Query Frame = 0

Query: 1    MLLTIAFMKGWVIKQLDVNNAFLHGKLEEDVYMEQPYGFETKASRPLVCHLQKAIYGLKQ 60
            ++ TIA  + W IKQLDVNNAFL+G L+E+V+M+QP GF  + +  LVC L KA+YGLKQ
Sbjct: 986  VVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFIDEKNPNLVCRLHKALYGLKQ 1045

Query: 61   ASRAWYEKLSSSLHNLGFRTSKADSSLLIRINSTSCCYILI--------------LNDLI 120
            A RAW+EKL  +L + GF ++K+D SL +R   +   Y+L+              +  LI
Sbjct: 1046 APRAWFEKLHQALLSFGFVSAKSDQSLFLRFTPSHITYVLVYVDDILVIGSDTTTITSLI 1105

Query: 121  KALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSMVS 180
              LN  F+LKDLG + YFLG++VS+ TN G+ LSQ KYI DLLQKTKM+  KP  T + +
Sbjct: 1106 AQLNSEFSLKDLGEVHYFLGIQVSH-TNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLPT 1165

Query: 181  GQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEIS 203
            G  + A  G+   D++ YRSTVGALQY T+T  E+S
Sbjct: 1166 GLKLRAGDGDPVDDLHGYRSTVGALQYVTITRPELS 1200

BLAST of Cmc11g0306651 vs. ExPASy TrEMBL
Match: A5BMC8 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_041406 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 6.0e-48
Identity = 107/218 (49.08%), Postives = 145/218 (66.51%), Query Frame = 0

Query: 1    MLLTIAFMKGWVIKQLDVNNAFLHGKLEEDVYMEQPYGFE--TKASRPLVCHLQKAIYGL 60
            ++L IA  + W I+QLDVNNAFL+G+L+E+VYM+QP GF+  T   + LVC L KA+YGL
Sbjct: 839  VVLAIAVSQSWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGL 898

Query: 61   KQASRAWYEKLSSSLHNLGFRTSKADSSLLIRINSTSCCYILI--------------LND 120
            KQA RAW++KL  SL   GF ++K+D SL +R  + S  ++L+              +++
Sbjct: 899  KQAPRAWFDKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHE 958

Query: 121  LIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSM 180
            LI  L   F+LKDLG LSYFLG+EV    +GG+ LSQ KYI DLL+KTKM  AK + T M
Sbjct: 959  LISRLRGLFSLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPTPM 1018

Query: 181  VSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEIS 203
            +SG  + A  G+   +V+ YRS VGALQY T+T  EI+
Sbjct: 1019 LSGLKLSAGMGDPIDNVFEYRSVVGALQYITITRPEIA 1056

BLAST of Cmc11g0306651 vs. ExPASy TrEMBL
Match: A0A438EA49 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2917 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 6.0e-48
Identity = 107/218 (49.08%), Postives = 145/218 (66.51%), Query Frame = 0

Query: 1    MLLTIAFMKGWVIKQLDVNNAFLHGKLEEDVYMEQPYGFE--TKASRPLVCHLQKAIYGL 60
            ++L IA  + W I+QLDVNNAFL+G+L+E+VYM+QP GF+  T   + LVC L KA+YGL
Sbjct: 1045 VVLAIAVSQSWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGL 1104

Query: 61   KQASRAWYEKLSSSLHNLGFRTSKADSSLLIRINSTSCCYILI--------------LND 120
            KQA RAW++KL  SL   GF ++K+D SL +R  + S  ++L+              +++
Sbjct: 1105 KQAPRAWFDKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHE 1164

Query: 121  LIKALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPISTSM 180
            LI  L   F+LKDLG LSYFLG+EV    +GG+ LSQ KYI DLL+KTKM  AK + T M
Sbjct: 1165 LISRLRGLFSLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPTPM 1224

Query: 181  VSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEIS 203
            +SG  + A  G+   +V+ YRS VGALQY T+T  EI+
Sbjct: 1225 LSGLKLSAGMGDPIDNVFEYRSVVGALQYITITRPEIA 1262

BLAST of Cmc11g0306651 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 139.8 bits (351), Expect = 2.4e-33
Identity = 81/220 (36.82%), Postives = 125/220 (56.82%), Query Frame = 0

Query: 1   MLLTIAFMKGWVIKQLDVNNAFLHGKLEEDVYMEQPYGFETKASRPL----VCHLQKAIY 60
           ++L I+ +  + + QLD++NAFL+G L+E++YM+ P G+  +    L    VC+L+K+IY
Sbjct: 178 LILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIY 237

Query: 61  GLKQASRAWYEKLSSSLHNLGFRTSKADSSLLIRINST-SCCYILILNDLI--------- 120
           GLKQASR W+ K S +L   GF  S +D +  ++I +T   C ++ ++D+I         
Sbjct: 238 GLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAV 297

Query: 121 ----KALNKAFALKDLGALSYFLGVEVSYPTNGGMFLSQVKYITDLLQKTKMIEAKPIST 180
                 L   F L+DLG L YFLG+E++  +  G+ + Q KY  DLL +T ++  KP S 
Sbjct: 298 DELKSQLKSCFKLRDLGPLKYFLGLEIA-RSAAGINICQRKYALDLLDETGLLGCKPSSV 357

Query: 181 SMVSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEIS 203
            M       AH G +F D   YR  +G L Y  +T L+IS
Sbjct: 358 PMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDIS 396

BLAST of Cmc11g0306651 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 6.2e-13
Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 0

Query: 101 ILNDLIKALNKAFALKDLGALSYFLGVEV-SYPTNGGMFLSQVKYITDLLQKTKMIEAKP 160
           +LN LI  L+  F++KDLG + YFLG+++ ++P+  G+FLSQ KY   +L    M++ KP
Sbjct: 19  LLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPS--GLFLSQTKYAEQILNNAGMLDCKP 78

Query: 161 ISTSMVSGQLVFAHQGENFHDVYLYRSTVGALQYATLTHLEIS 203
           +ST +   +L  +     + D   +RS VGALQY TLT  +IS
Sbjct: 79  MSTPLPL-KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDIS 118

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0052371.14.0e-7871.30putative mitochondrial protein [Cucumis melo var. makuwa] >TYK09417.1 putative m... [more]
XP_016903382.14.6e-50100.00PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo][more]
RVX14937.15.6e-4849.07Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
XP_016163061.11.2e-4747.69uncharacterized protein LOC107605630 [Arachis ipaensis][more]
RVW44519.11.2e-4749.08Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
Q94HW21.0e-3642.40Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT946.6e-3640.74Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P109783.4e-2435.94Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P256003.7e-1829.08Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
P041466.9e-1728.97Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Match NameE-valueIdentityDescription
A0A5A7UFS31.9e-7871.30Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S4E5842.2e-50100.00uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=... [more]
A0A438K1472.7e-4849.07Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A5BMC86.0e-4849.08Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI... [more]
A0A438EA496.0e-4849.08Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
Match NameE-valueIdentityDescription
AT4G23160.12.4e-3336.82cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.16.2e-1341.75DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..164
e-value: 2.5E-35
score: 122.3
NoneNo IPR availablePANTHERPTHR11439:SF351CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8coord: 7..164
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 7..164
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 8..194

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0306651.1Cmc11g0306651.1mRNA