Cmc11g0305401 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0305401
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	embryo-specific protein ATS3A-like
Location	CMiso1.1chr11: 26728664 .. 26730511 (-)
RNA-Seq Expression	Cmc11g0305401
Synteny	Cmc11g0305401

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTCTTTATCTAACGTTCTTACCCAATTCTGTTATTATTACAACAAACCCATTTTCTATTTTCTCTCCCATTCCTAAAATCAGGCCGGCCCTTCCCATGGCTTATACCCGCGGAACATGGCCGCCGTTTTTCGCTCTTCTTCTCTTCTCTCTACTCTCCGCCACCCATTGTCTCCTCGGTAACGATAAGGTAATCAACCTTTTTTTTTTTCTCTTTTTTTTTTAGGGCAATTACAATCAATACAAATTTTAAAGTTAGTTTGAATGATAAATATACTAAAATTTTTCGGACGTAAATTCTTTCGTTGCTGCGGATACATTTCTACTGGTGAAAGATGGCTAGTGATATAGTTTAGGATTAGGAAAATTTTATCTAAATTTTGTTATATCTACTATTTTTTTAAATTATAAAAATGTTTCTAATTAACTTCGCTCTTTTATTTCGCATAAAGTAGTCCTATTTTTCAAAACTAATTTTTACTTTTTAATATTTTAAGCCTACATTTAGGGGTAGAAATCATTTAGAAATTTGTACAACAATTGGGGCCTAACATCTTGTGGTAGTAAATTTCTTAGGTCTCAATTCTTTTATCCAAAATTGTAGAAGATTTTTACTCCCAACGAAGCATTCAAATGTTTTTGACGTGTAAAAAATAATATTACAATATTTTTGGAAGAAATAGGTATTTTTGTAACAAACCATTAAGGTCATAGATATTTATTTCTTTTGGTTCAATTGTAAATTTATAGTTTCTGTAATTTAGACAAATTAAAGTATGAATTTAATCCATGTCATTTTATAATTAAAATTTCATCTTAGCAAAAACTACTTATGAACAAAAACAAAAGGGTATATGTAGAATTCAACTAATTTATAATTTTATATGCATCTTAGATTATAGATATTATTAAATAAAAGTAAAACTGATAAACTTAAATTATATCAACTAAATTAATCCTTTCAAAATTGTAGAACCCTTTTTCTCTCTCTTGTTATTTTAAAATTATGAAAGGTAATTATAAAATTTTATTATCATTTTGAATAGAATTTTTGAATATAGTTTGTAATTTAATGTTTTGTGTAATTAGTATAATGATGTTAATTAAATAGGAGAAAAATTGTATGTACGCGGTGACCGTGGAAACAAGTTGCACGAAAGGAGCGGACACATCGAACCACGTCAGTCTGAGATTCGGGGACACGAATTCCAACGACATTGTGGTAAGACGTTTGAATTCGAAGCACGTGAGAAGAGTGGATCCTTTGGAACCTCAAGTTCTAGACGACATTTCGAGAAAACCCTTTCAAGTTTGTATGGTCGATCAGTTTCAAGTGACCGGAAAATGCGTCACCTCACCCATCTGTTACCTCTACCTTAAACTCTCCGGTGCCGACGACTGGCGCCCTGGTTTCGTCCAAGTCCGCTCGTTGGAGGGCCCACATCTCAGCTCCAATTATTTCTACTTCCGACGTGTATTGCCTCGTCACGTTTGGCATGGATTTGACACGTGTCCTGGTGAAGTCACTCCTTTTGGCATCAAACGCAATAGAAAGGTTTAAACTTTATTTAGCCTTTGTTTAATCAAATGGATTCATTAATTTCTTTACCATGTCAATTAAATAAAAGTATATATATATATATATATATATATATATATTGTTTTTTTACTTTTCTTTTCTACATGATGTCGATCCCAGAAGTCGAACATCTAACGTTTTGATAAGGACAACGAAAATCTGCAAACATTTTCATTCTTATTGATTTTGTTTGTGTCAATTTTTATGTTAGTTTAGCTATTATTCAATATTAAAATCTTTCTATTGGAAATTAAAAATTTCAAATAAA

mRNA sequence

CTTTTCTTTATCTAACGTTCTTACCCAATTCTGTTATTATTACAACAAACCCATTTTCTATTTTCTCTCCCATTCCTAAAATCAGGCCGGCCCTTCCCATGGCTTATACCCGCGGAACATGGCCGCCGTTTTTCGCTCTTCTTCTCTTCTCTCTACTCTCCGCCACCCATTGTCTCCTCGGTAACGATAAGGAGAAAAATTGTATGTACGCGGTGACCGTGGAAACAAGTTGCACGAAAGGAGCGGACACATCGAACCACGTCAGTCTGAGATTCGGGGACACGAATTCCAACGACATTGTGGTAAGACGTTTGAATTCGAAGCACGTGAGAAGAGTGGATCCTTTGGAACCTCAAGTTCTAGACGACATTTCGAGAAAACCCTTTCAAGTTTGTATGGTCGATCAGTTTCAAGTGACCGGAAAATGCGTCACCTCACCCATCTGTTACCTCTACCTTAAACTCTCCGGTGCCGACGACTGGCGCCCTGGTTTCGTCCAAGTCCGCTCGTTGGAGGGCCCACATCTCAGCTCCAATTATTTCTACTTCCGACGTGTATTGCCTCGTCACGTTTGGCATGGATTTGACACGTGTCCTGGTGAAGTCACTCCTTTTGGCATCAAACGCAATAGAAAGGTTTAAACTTTATTTAGCCTTTGTTTAATCAAATGGATTCATTAATTTCTTTACCATGTCAATTAAATAAAAGTATATATATATATATATATATATATATATATTGTTTTTTTACTTTTCTTTTCTACATGATGTCGATCCCAGAAGTCGAACATCTAACGTTTTGATAAGGACAACGAAAATCTGCAAACATTTTCATTCTTATTGATTTTGTTTGTGTCAATTTTTATGTTAGTTTAGCTATTATTCAATATTAAAATCTTTCTATTGGAAATTAAAAATTTCAAATAAA

Coding sequence (CDS)

ATGGCTTATACCCGCGGAACATGGCCGCCGTTTTTCGCTCTTCTTCTCTTCTCTCTACTCTCCGCCACCCATTGTCTCCTCGGTAACGATAAGGAGAAAAATTGTATGTACGCGGTGACCGTGGAAACAAGTTGCACGAAAGGAGCGGACACATCGAACCACGTCAGTCTGAGATTCGGGGACACGAATTCCAACGACATTGTGGTAAGACGTTTGAATTCGAAGCACGTGAGAAGAGTGGATCCTTTGGAACCTCAAGTTCTAGACGACATTTCGAGAAAACCCTTTCAAGTTTGTATGGTCGATCAGTTTCAAGTGACCGGAAAATGCGTCACCTCACCCATCTGTTACCTCTACCTTAAACTCTCCGGTGCCGACGACTGGCGCCCTGGTTTCGTCCAAGTCCGCTCGTTGGAGGGCCCACATCTCAGCTCCAATTATTTCTACTTCCGACGTGTATTGCCTCGTCACGTTTGGCATGGATTTGACACGTGTCCTGGTGAAGTCACTCCTTTTGGCATCAAACGCAATAGAAAGGTTTAA

Protein sequence

MAYTRGTWPPFFALLLFSLLSATHCLLGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYLKLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV

Homology

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BLAST of Cmc11g0305401 vs. NCBI nr
Match: XP_008463858.1 (PREDICTED: uncharacterized protein LOC103501893 [Cucumis melo])

HSP 1 Score: 386.7 bits (992), Expect = 1.1e-103
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MAYTRGTWPPFFALLLFSLLSATHCLLGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFG 60
           MAYTRGTWPPFFALLLFSLLSATHCLLGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFG
Sbjct: 1   MAYTRGTWPPFFALLLFSLLSATHCLLGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFG 60

Query: 61  DTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYL 120
           DTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYL
Sbjct: 61  DTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYL 120

Query: 121 KLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV 180
           KLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV
Sbjct: 121 KLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV 180

[Close]

BLAST of Cmc11g0305401 vs. NCBI nr
Match: XP_004148245.1 (embryo-specific protein ATS3A isoform X1 [Cucumis sativus])

HSP 1 Score: 357.1 bits (915), Expect = 9.1e-95
Identity = 167/180 (92.78%), Postives = 172/180 (95.56%), Query Frame = 0


Query: 1   MAYTRGTWPPFFALLLFSLLSATHCLLGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFG 60
           MA +  T PPF ALLLFSLLSATHCLL NDK+KNCMYAVTVETSCTKGADTSNHVSLRFG
Sbjct: 1   MANSGRTSPPFIALLLFSLLSATHCLLHNDKQKNCMYAVTVETSCTKGADTSNHVSLRFG 60

Query: 61  DTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYL 120
           DTNSNDIVVRRLN KHVRRVDPLEPQVLDD+SRKPFQVCMVDQFQVTGKCVTSPICYLYL
Sbjct: 61  DTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYL 120

Query: 121 KLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV 180
           KLSG DDWRPGFVQVRSL+GPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFG+KRNRKV
Sbjct: 121 KLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV 180

[Close]

BLAST of Cmc11g0305401 vs. NCBI nr
Match: XP_011657238.1 (embryo-specific protein ATS3A isoform X2 [Cucumis sativus] >KGN47335.1 hypothetical protein Csa_022990 [Cucumis sativus])

HSP 1 Score: 351.3 bits (900), Expect = 5.0e-93
Identity = 167/180 (92.78%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 1   MAYTRGTWPPFFALLLFSLLSATHCLLGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFG 60
           MA +  T PPF ALLLFSLLSATHCLL NDK KNCMYAVTVETSCTKGADTSNHVSLRFG
Sbjct: 1   MANSGRTSPPFIALLLFSLLSATHCLLHNDK-KNCMYAVTVETSCTKGADTSNHVSLRFG 60

Query: 61  DTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYL 120
           DTNSNDIVVRRLN KHVRRVDPLEPQVLDD+SRKPFQVCMVDQFQVTGKCVTSPICYLYL
Sbjct: 61  DTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYL 120

Query: 121 KLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV 180
           KLSG DDWRPGFVQVRSL+GPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFG+KRNRKV
Sbjct: 121 KLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV 179

[Close]

BLAST of Cmc11g0305401 vs. NCBI nr
Match: XP_038902188.1 (embryo-specific protein ATS3A-like [Benincasa hispida])

HSP 1 Score: 332.8 bits (852), Expect = 1.8e-87
Identity = 160/182 (87.91%), Postives = 167/182 (91.76%), Query Frame = 0


Query: 1   MAYTRGTWPPFFA--LLLFSLLSATHCLLGNDKEKNCMYAVTVETSCTKGADTSNHVSLR 60
           MA + GT   F+   LLLFSLLS THC + +DK KNCMYAVTVET+CTKGADTSNHVSLR
Sbjct: 1   MADSGGTSSTFYVLLLLLFSLLSTTHCFVPDDK-KNCMYAVTVETTCTKGADTSNHVSLR 60

Query: 61  FGDTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKPFQVCMVDQFQVTGKCVTSPICYL 120
           FGDTNSNDIVVRRLNSK VRRVDPL+PQVLDD+SRKPFQ CMVDQFQVTGKCVTSPICYL
Sbjct: 61  FGDTNSNDIVVRRLNSKQVRRVDPLQPQVLDDMSRKPFQACMVDQFQVTGKCVTSPICYL 120

Query: 121 YLKLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNR 180
           YLKL GADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNR
Sbjct: 121 YLKLVGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNR 180

[Close]

BLAST of Cmc11g0305401 vs. NCBI nr
Match: XP_022146261.1 (embryo-specific protein ATS3A-like [Momordica charantia])

HSP 1 Score: 317.0 bits (811), Expect = 1.0e-82
Identity = 149/180 (82.78%), Postives = 162/180 (90.00%), Query Frame = 0


Query: 1   MAYTRGTWPPFFALLLFSLLSATHCLLGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFG 60
           M  + GT P F+A+LL SLLSA   L+ ND  K CMYAVTVET+CTKGADTSNHVSLRFG
Sbjct: 1   MGNSGGTPPSFYAVLLISLLSAGESLVSND-TKTCMYAVTVETTCTKGADTSNHVSLRFG 60

Query: 61  DTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYL 120
           DTNSNDIVVRRLNS HV+RVDPLEP+VLDD+SRKPFQ CMVDQFQVTGKCVTSP+CY+YL
Sbjct: 61  DTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYL 120

Query: 121 KLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV 180
           KL+GADDWRPGFV+VRSLEGPHLSS YFYFRRVLPRHVWHGFDTC GEVTPFGIK +RKV
Sbjct: 121 KLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV 179

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BLAST of Cmc11g0305401 vs. ExPASy Swiss-Prot
Match: Q681K2 (Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.4e-18
Identity = 45/133 (33.83%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 35  CMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRK 94
           C Y V ++TSC+  + T + +S+ FGD   N++ V+R                LDD S +
Sbjct: 48  CSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKR----------------LDDPSSR 107

Query: 95  PFQVCMVDQFQVTGKCVTSPICYLYLKLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVL 154
            F+ C  D ++++G C+   +CYLYL   G+D W+P  V++    G  + S  FY+   L
Sbjct: 108 TFEKCSSDTYKISGPCMRD-VCYLYLLRQGSDGWKPENVKI---YGSSIRSVTFYYNLFL 160

Query: 155 PRHVWHGFDTCPG 168
           P  VW+GF+ C G
Sbjct: 168 PNSVWYGFNVCNG 160

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BLAST of Cmc11g0305401 vs. ExPASy Swiss-Prot
Match: Q6NPM5 (Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-15
Identity = 52/155 (33.55%), Postives = 71/155 (45.81%), Query Frame = 0


Query: 27  LGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDPLEPQ 86
           LGN     C Y V + TSC+    T + +S+ FGD   N I   R               
Sbjct: 44  LGN----TCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPR--------------- 103

Query: 87  VLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYLKLSGADDWRPGFVQVRSLEGPHLSSN 146
            LDD S K F+ C  D FQ+ G C T  ICY+YL  SG D W P  V++ S     ++  
Sbjct: 104 -LDDPSTKTFEQCSSDTFQINGPC-TYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVT-- 163

Query: 147 YFYFRRVLPRHVWHGFDTC----PGEVTPFGIKRN 178
            F +   +P  VW+GF+ C       V   G++R+
Sbjct: 164 -FPYNTYVPESVWYGFNYCNSASDSNVLAIGLRRS 174

[Close]

BLAST of Cmc11g0305401 vs. ExPASy Swiss-Prot
Match: Q9LYP6 (Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.2e-11
Identity = 45/159 (28.30%), Postives = 72/159 (45.28%), Query Frame = 0


Query: 13  ALLLFSLLSATHCL---LGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVV 72
           + L F+ +  TH     +   ++  C Y V V TSC     T + +S+ FGD + N +  
Sbjct: 9   SFLFFAFIFVTHAFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYA 68

Query: 73  RRLNSKHVRRVDPLEPQVLDDISRKP--FQVCMVDQFQVTGKCVTSPICYLYLKLSGADD 132
            +L                  + R P     C  + FQV G+C+  PIC LY+  +G D 
Sbjct: 69  PKLGG----------------LVRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDG 128

Query: 133 WRPGFVQVRSLEGPHLSSNYFYFRRVLPR-HVWHGFDTC 166
           W P  +++ S EG    S  F F + +P+ + W+G + C
Sbjct: 129 WVPESIEIYS-EGS--KSVKFDFSKSVPQLNTWYGHNNC 148

[Close]

BLAST of Cmc11g0305401 vs. ExPASy TrEMBL
Match: A0A1S3CK61 (uncharacterized protein LOC103501893 OS=Cucumis melo OX=3656 GN=LOC103501893 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.2e-104
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MAYTRGTWPPFFALLLFSLLSATHCLLGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFG 60
           MAYTRGTWPPFFALLLFSLLSATHCLLGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFG
Sbjct: 1   MAYTRGTWPPFFALLLFSLLSATHCLLGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFG 60

Query: 61  DTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYL 120
           DTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYL
Sbjct: 61  DTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYL 120

Query: 121 KLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV 180
           KLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV
Sbjct: 121 KLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV 180

[Close]

BLAST of Cmc11g0305401 vs. ExPASy TrEMBL
Match: A0A0A0KC84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301050 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.4e-93
Identity = 167/180 (92.78%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 1   MAYTRGTWPPFFALLLFSLLSATHCLLGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFG 60
           MA +  T PPF ALLLFSLLSATHCLL NDK KNCMYAVTVETSCTKGADTSNHVSLRFG
Sbjct: 1   MANSGRTSPPFIALLLFSLLSATHCLLHNDK-KNCMYAVTVETSCTKGADTSNHVSLRFG 60

Query: 61  DTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYL 120
           DTNSNDIVVRRLN KHVRRVDPLEPQVLDD+SRKPFQVCMVDQFQVTGKCVTSPICYLYL
Sbjct: 61  DTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYL 120

Query: 121 KLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV 180
           KLSG DDWRPGFVQVRSL+GPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFG+KRNRKV
Sbjct: 121 KLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV 179

[Close]

BLAST of Cmc11g0305401 vs. ExPASy TrEMBL
Match: A0A6J1CYS2 (embryo-specific protein ATS3A-like OS=Momordica charantia OX=3673 GN=LOC111015516 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.1e-83
Identity = 149/180 (82.78%), Postives = 162/180 (90.00%), Query Frame = 0


Query: 1   MAYTRGTWPPFFALLLFSLLSATHCLLGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFG 60
           M  + GT P F+A+LL SLLSA   L+ ND  K CMYAVTVET+CTKGADTSNHVSLRFG
Sbjct: 1   MGNSGGTPPSFYAVLLISLLSAGESLVSND-TKTCMYAVTVETTCTKGADTSNHVSLRFG 60

Query: 61  DTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYL 120
           DTNSNDIVVRRLNS HV+RVDPLEP+VLDD+SRKPFQ CMVDQFQVTGKCVTSP+CY+YL
Sbjct: 61  DTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYL 120

Query: 121 KLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV 180
           KL+GADDWRPGFV+VRSLEGPHLSS YFYFRRVLPRHVWHGFDTC GEVTPFGIK +RKV
Sbjct: 121 KLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV 179

[Close]

BLAST of Cmc11g0305401 vs. ExPASy TrEMBL
Match: A0A5D3CVS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00990 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.2e-81
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 36  MYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKP 95
           MYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKP
Sbjct: 1   MYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKP 60

Query: 96  FQVCMVDQFQVTGKCVTSPICYLYLKLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLP 155
           FQVCMVDQFQVTGKCVTSPICYLYLKLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLP
Sbjct: 61  FQVCMVDQFQVTGKCVTSPICYLYLKLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLP 120

Query: 156 RHVWHGFDTCPGEVTPFGIKRNRK 180
           RHVWHGFDTCPGEVTPFGIKRNRK
Sbjct: 121 RHVWHGFDTCPGEVTPFGIKRNRK 144

[Close]

BLAST of Cmc11g0305401 vs. ExPASy TrEMBL
Match: A0A6J1L2N6 (embryo-specific protein ATS3A-like OS=Cucurbita maxima OX=3661 GN=LOC111499859 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.4e-79
Identity = 145/180 (80.56%), Postives = 156/180 (86.67%), Query Frame = 0


Query: 1   MAYTRGTWPPFFALLLFSLLSATHCLLGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFG 60
           M ++ GT PPF ALLL SLL+A +C L +  EK CMYAVTVET+CTKGADTSNHVSLRFG
Sbjct: 1   MPFSGGTAPPFCALLLLSLLAAGNC-LASTHEKACMYAVTVETTCTKGADTSNHVSLRFG 60

Query: 61  DTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYL 120
           DTNSNDIVV  LNSKHVRRVD LEPQVLDD+ RKPFQ CMVD FQVT KCVTSPICYLYL
Sbjct: 61  DTNSNDIVVGHLNSKHVRRVDSLEPQVLDDMPRKPFQACMVDHFQVTAKCVTSPICYLYL 120

Query: 121 KLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV 180
           K++GADDWRPGFV VR LE PHLSSN FYFRRVLPRHVWHG DTC G+VTPFGIKR+RKV
Sbjct: 121 KVAGADDWRPGFVHVRLLESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKV 179

[Close]

BLAST of Cmc11g0305401 vs. TAIR 10
Match: AT2G41475.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 91.7 bits (226), Expect = 6.6e-19
Identity = 45/133 (33.83%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 35  CMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRK 94
           C Y V ++TSC+  + T + +S+ FGD   N++ V+R                LDD S +
Sbjct: 48  CSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKR----------------LDDPSSR 107

Query: 95  PFQVCMVDQFQVTGKCVTSPICYLYLKLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVL 154
            F+ C  D ++++G C+   +CYLYL   G+D W+P  V++    G  + S  FY+   L
Sbjct: 108 TFEKCSSDTYKISGPCMRD-VCYLYLLRQGSDGWKPENVKI---YGSSIRSVTFYYNLFL 160

Query: 155 PRHVWHGFDTCPG 168
           P  VW+GF+ C G
Sbjct: 168 PNSVWYGFNVCNG 160

[Close]

BLAST of Cmc11g0305401 vs. TAIR 10
Match: AT5G62200.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 52/155 (33.55%), Postives = 71/155 (45.81%), Query Frame = 0


Query: 27  LGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDPLEPQ 86
           LGN     C Y V + TSC+    T + +S+ FGD   N I   R               
Sbjct: 44  LGN----TCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPR--------------- 103

Query: 87  VLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYLKLSGADDWRPGFVQVRSLEGPHLSSN 146
            LDD S K F+ C  D FQ+ G C T  ICY+YL  SG D W P  V++ S     ++  
Sbjct: 104 -LDDPSTKTFEQCSSDTFQINGPC-TYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVT-- 163

Query: 147 YFYFRRVLPRHVWHGFDTC----PGEVTPFGIKRN 178
            F +   +P  VW+GF+ C       V   G++R+
Sbjct: 164 -FPYNTYVPESVWYGFNYCNSASDSNVLAIGLRRS 174

[Close]

BLAST of Cmc11g0305401 vs. TAIR 10
Match: AT5G62210.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-12
Identity = 44/135 (32.59%), Postives = 67/135 (49.63%), Query Frame = 0


Query: 31  KEKNCMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDPLEPQVLDD 90
           +E++C Y V V TSC     + + V++  GD + N +V  RL+        PL       
Sbjct: 36  EEESCPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLDK-------PLS------ 95

Query: 91  ISRKPFQVCMVDQFQVTGKCVTSPICYLYLKLSGADDWRPGFVQVRSLEGPHLSSNYFYF 150
                F+ C  D FQV GKC+ + IC +Y+  SG D W P  V++   EG    S  F F
Sbjct: 96  -GGGGFEKCSSDTFQVKGKCLNT-ICSVYIYRSGTDGWIPETVEIYK-EGS--KSVKFDF 152

Query: 151 RRVLPRHVWHGFDTC 166
            + +P ++W+G + C
Sbjct: 156 NKNVPENIWYGNNYC 152

[Close]

BLAST of Cmc11g0305401 vs. TAIR 10
Match: AT5G07190.1 (seed gene 3 )

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-12
Identity = 45/159 (28.30%), Postives = 72/159 (45.28%), Query Frame = 0


Query: 13  ALLLFSLLSATHCL---LGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVV 72
           + L F+ +  TH     +   ++  C Y V V TSC     T + +S+ FGD + N +  
Sbjct: 9   SFLFFAFIFVTHAFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYA 68

Query: 73  RRLNSKHVRRVDPLEPQVLDDISRKP--FQVCMVDQFQVTGKCVTSPICYLYLKLSGADD 132
            +L                  + R P     C  + FQV G+C+  PIC LY+  +G D 
Sbjct: 69  PKLGG----------------LVRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDG 128

Query: 133 WRPGFVQVRSLEGPHLSSNYFYFRRVLPR-HVWHGFDTC 166
           W P  +++ S EG    S  F F + +P+ + W+G + C
Sbjct: 129 WVPESIEIYS-EGS--KSVKFDFSKSVPQLNTWYGHNNC 148

[Close]

BLAST of Cmc11g0305401 vs. TAIR 10
Match: AT5G07190.2 (seed gene 3 )

HSP 1 Score: 68.6 bits (166), Expect = 6.0e-12
Identity = 41/138 (29.71%), Postives = 64/138 (46.38%), Query Frame = 0


Query: 31  KEKNCMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDPLEPQVLDD 90
           ++  C Y V V TSC     T + +S+ FGD + N +   +L                  
Sbjct: 2   QQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGG---------------- 61

Query: 91  ISRKP--FQVCMVDQFQVTGKCVTSPICYLYLKLSGADDWRPGFVQVRSLEGPHLSSNYF 150
           + R P     C  + FQV G+C+  PIC LY+  +G D W P  +++ S EG    S  F
Sbjct: 62  LVRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYS-EGS--KSVKF 120

Query: 151 YFRRVLPR-HVWHGFDTC 166
            F + +P+ + W+G + C
Sbjct: 122 DFSKSVPQLNTWYGHNNC 120

The following BLAST results are available for this feature:

BLAST of Cmc11g0305401 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463858.1	1.1e-103	100.00	PREDICTED: uncharacterized protein LOC103501893 [Cucumis melo]	[more]
XP_004148245.1	9.1e-95	92.78	embryo-specific protein ATS3A isoform X1 [Cucumis sativus]	[more]
XP_011657238.1	5.0e-93	92.78	embryo-specific protein ATS3A isoform X2 [Cucumis sativus] >KGN47335.1 hypotheti...	[more]
XP_038902188.1	1.8e-87	87.91	embryo-specific protein ATS3A-like [Benincasa hispida]	[more]
XP_022146261.1	1.0e-82	82.78	embryo-specific protein ATS3A-like [Momordica charantia]	[more]

BLAST of Cmc11g0305401 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q681K2	9.4e-18	33.83	Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1	[more]
Q6NPM5	2.0e-15	33.55	Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1	[more]
Q9LYP6	2.2e-11	28.30	Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1	[more]

BLAST of Cmc11g0305401 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CK61	5.2e-104	100.00	uncharacterized protein LOC103501893 OS=Cucumis melo OX=3656 GN=LOC103501893 PE=...	[more]
A0A0A0KC84	2.4e-93	92.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301050 PE=4 SV=1	[more]
A0A6J1CYS2	5.1e-83	82.78	embryo-specific protein ATS3A-like OS=Momordica charantia OX=3673 GN=LOC11101551...	[more]
A0A5D3CVS5	6.2e-81	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1L2N6	3.4e-79	80.56	embryo-specific protein ATS3A-like OS=Cucurbita maxima OX=3661 GN=LOC111499859 P...	[more]

BLAST of Cmc11g0305401 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41475.1	6.6e-19	33.83	Embryo-specific protein 3, (ATS3)	[more]
AT5G62200.1	1.4e-16	33.55	Embryo-specific protein 3, (ATS3)	[more]
AT5G62210.1	1.6e-12	32.59	Embryo-specific protein 3, (ATS3)	[more]
AT5G07190.1	1.6e-12	28.30	seed gene 3	[more]
AT5G07190.2	6.0e-12	29.71	seed gene 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010417	Embryo-specific ATS3	PFAM	PF06232	ATS3	coord: 30..165 e-value: 4.8E-45 score: 152.5
None	No IPR available	GENE3D	2.60.60.20	PLAT/LH2 domain	coord: 22..159 e-value: 1.9E-6 score: 29.6
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 8..180
None	No IPR available	PANTHER	PTHR31718:SF30	EMBRYO-SPECIFIC PROTEIN	coord: 8..180
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 33..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0305401.1	Cmc11g0305401.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding