Cmc11g0300211 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0300211
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	transcription initiation factor IIA subunit 1
Location	CMiso1.1chr11: 20585601 .. 20593225 (-)
RNA-Seq Expression	Cmc11g0300211
Synteny	Cmc11g0300211

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCGCCACGTGGATCTATGCATTATAATCGGATGCAAACCTATTTATATTCCACTCTTTATTCTCCCTTTCTTGTCCGCCTCTCTCCTCTTTCCCCCTTCTCTCTCTCTCCCTTCTTTCCCTCTCTTCTCTCTCTCTCTTCCTCTTCCTCCCCCCTTCCTCGCCCTCCTCCTCCCTTTTACTTCACATAACTCTACCAATCCAAGAACCTTATACGGATTCCATGGATCTTCTCCCTTGAATTCCCTCTCTAATTTTCTCCCAACACTAGATTTTTTCTGGGTTTTGGCTTGTGGAAGGAATCCGAGGTAGACAGAGCGCGAGGCGGATCCGTTATGGCGACTTCCACAAGCTCTATCTACATCAATGTCATCGAAGATGTTATCAACAAGCTTCGTGACGAGTTTGTTGATAATGGTCCTGGAGAAGACGTTCTCAAGGAGCTTCAAGGAGTAATTCTTGATCCCCAATCTTGAATTTTTTTGTTATCTTTCTTGCTTTTATACTACTATCCTCTTAAGTGGATTGAAATGCTTTCTTTTTTAATCTGTTTGAAGGATTCGATTGAATTTTTTCGGTGATTACTTTCTGGGTTTGATCCGATTCTTTCTAGGGTTTTGAGGCTTTGAAGCTAATTTAAGCTTGTGGTTGGGCTGATTGTCTTCTTTGTCGGAACTTTTTAGATGTGGGAGGCGAAAATGATGCAAGCGGGTGCTGTGACTGGTCCTATAGAGAGGTCTGCACCATCTAAGCCTACACCCGGAGGTCCGATAACTCCGGTTCACGATCTTAATGTTCCGTATGAGGGTACTGAAGAGTACGAAACTCCCACGGCTGATTTACTCTTTCCACCGGTGATTACTTCTCTGTCCCATCTACTAATTGTTTTCCGAAGTTCGTAACTAATAATCGATGGGATTTTGGTAAATTGTAGACGCCACTACAGACTCCAATTCAAACCCCTTTACCGGGGACTGCTGACAACGCGATGTATAATGTTCCTACTGGACCCAGCGACCACTCTGCATCTGGAACTGATGCTTCTCCAGCTGCCACCACTCCTGGGGGTAGCGGTAATAATAATGTTGAGGTCAGATCTGGAAGGCCAACCCCATATATGGTAATTTTTGTTTGACTTTGACGCCACTTCTAATCTTTTACATTTGTCTCATTCCCTGCCGTTTCACTTCATTGTCGTGATTGCAGCATTTTTTTTTTACCTTTTGTCTCTTTGATAAGAGGAAGTGTTGGTTTTTAATTTGATTTAAAGTGGATTAATGGCATTGATATGGTTTTTACCATAAAAATTCTGAAGCATGTTGTAGATAGTTGAACATTCCATTATCTGGGGTTTTGATAGACGTCTACATTCTTCTTTCAGCAACCACCCTCTTGGATGGGTCAAAGAACTCCTGTAGACGTTAATATTGGTGAGTCTAGTGTTGAAGTAGTGGAAAGCTTCTCAACAATAATTCTGTAGTAATTTATATTGATTGTTTTGTAGCCTACGTGGAGGGGCGTGAGGAAGCAGACAGGGGAGCTGCTGGCGCTCATCCATCCCTTACACAGGTAATCTCATTCTTGATTCGTGCTTTCATCATGAAAAAATTTGTTCCTTAAGGCTTGATGCAACACCAAAAACTGCTTCGTTAATTTCTTCTGCTTCTGATTTTGAATTACTCTACTCCTCTCTGCTATGTATCTATTTGCACAACTTTGGTAACTTCATTATGATGTTTAAATTTGGGAAACAATTATCAGGACTTTTTCATGATGAACTCGGGGAAGCGTAAGCGTGATGATTTTGCTTCCCAGTACCAAGCTAATGGGTTTATACCTCAGCAAGATGGAGCTGGAGATGCTGCCAATAGTGTTTTCGAGATTGAGGTTTGGTTTTCTTACCTGTCCTTTTAGCCTTTGACTCTCTTGTCAATTTTCTTTCACATAATTTCACGTCATAGCATATAATTTTTATTATTTTGTCAAGCAAGAGTTCAAAAGTAATTACAAAAAAGGCTTCACAGCTGAATCCCACCGAGAGATGTTGTACCTAACAAGGGCCCAAATGTCACTATGAGACCTCTCAAGGCCTTAAAAAATTATGTTGTTTCTCTCTCCCTGAAGTAGAAAGGGAACTCCTTGATCATCTCTCTGGATCCCTATTCTAACCAAGCATAAACCGGAACTCTTCAAAGAAGCAACTCCAAACTAACATGATCTAGATCACAATTTTGATATGATCAAAATTCTTCTGCATCCTCCTACAAAGAATGCCGCAAAAAGTCCTGATCAAAACGGCCACCCCCTGAAACCCAGACCTAGGTATTAATTTTTTCTTGAAGAACCTGCCACATGAAACACTTTCTTTATTCGGTATTTTCATCTTCTACTACAAGACAATGACATAAGTCATTACCACTTGAGGGTGAGGATTGACCAAACAAAGGAAAAAAATTTATAAGACAAACCTTTGGATGGAGATTCCAAATCTGAACATCCCTTCTCCCCAAGATTGAACTGAACTTCACAATCAGAGAAAGAAAGGCAATGATTCCATTGTTGTCCTCTAGTTTTCTTCTCAGATAGAGGACGATGGAACCCCTCGAGAGGTCAAACTTCGGTTCATAGTCTTGTATGACTGCAAGTTGTGGAATTAGTTATAGAAACAATAGTAAAAGTGTCATGTACACAATTGTTTTTCCTGGATGGTAGTAAAAGCATCATGTATCCCTAGGGGTGGATGCTCATAATTGTTTTCCCTGGATGATTCTCCTGTACATGATATAGAAAGACATAATAATACACGACTTTACTTGAAAAGGATCCGTTCTATAGGTTGTACAACTGCACCCATCCTAAGAAAGACATAATAACACATGGAGCCATGCTACCTCCTAACAAGCTAAGGCGTGTTCTAGTTTCCCTCAATTTAAACATATAATATTTTCTGGTTTAAGTGTACATAATATGAAATTAATATTTGACATTGAAACTTCAGCTATTTTTTTATTGCTATAAGAAACCAGACGATATCCCAAAATGAATCCCACAATGGAGGGGAAATTGGAGAGTGGCGGCATTTCACATTCAAGCTCAATTATATTACATGCATCTCTCACTTTGTAGATTGAAAAATACCAGACTGTTTGAGAAGCTTAGTCTTTAGTTTACAGCTCATTTTGTCCAGTGCCCTCAACAATTGCCTATAATTGTCTTTATACTCATTCCCAGTTTGGGGTTCCTCTGCACAAACTTCACGCTATCGACTCATTTTCACAACACTTACTAAATGCCTAATCTAGCCAATAGATTGACCAACTTTGATAACCAGCTTGCTTCTGCTGCCTCACGTGTGTAATGGGGATTGGAAAGGTTGGTATATGTCTATAAGAGAGAAATTTTAGATCTGTAATATTCTTGACCGTAAATTCAGGTGGCTAGACTTGGCTTTGTGGGCCTAAAAGAAAATCTGGGCAGGTAAGTTCAAAGGGTGTGCATTATGGGTTGAGTTAAAAATGGTTATATGATTTATAGTAATTTACGAGTAGAACAATTAATGTTGCCATTTGATTGGCTAGAGGTCAAGCAACTGCTCCTAGGTGTTTGTTCTAGAGGATTTTTTTTCAAAGGCTACTCTATTGATAGTTGGTGGCATTTGGATCTTCAGTCATATTCACAATGAGGTTGTCTAGGCATTTGGATCTTCAGTCATGTTCAAAAAACGAGGTTGTCTATCTCTCTTGCCATGAGACCCCCATTTCCTACCCCTTCAACCAGAAGTTATGAGCTAAGATGTGTGATCACAAATATAAGTCATGGACACTGGTTAGTTTCTCAAAAATCTAGGATGGGACAACAATGAACAGGTTTATATGTACACATATACACATATATACATATATTTATTTATTTGTGATCTCATACTAAAAATTTGTTTTAATTTATTATGGTTATACTTTTATGATACATCAACCAACTAATCGATCTTTATAGAAAACCAACTTTTAATAAGATGATGTCCTGGGGAGGAGATTTGGAATACCATTAGTCTCAATAGCCCTTTATAGGTTTGTCTCTAAGGAGTTTGTTTGTTTTGTCAATACCATTTTATTGTTGTTTTTTTGGATTCATGATAGTTAGTGGATTTTTTTTTGATAAATAAATAAATTAATAATTATCGTTATTATTTGTAAAACCATGTCATATGATTTAATGAAATTAAAGTTTGGCTTCTTTTTAAAAAACTTCCATTATAAGAAGATGAAAAATAAAAATACAACGGGTTCAATTGAAGCGAGGAGAAACCAACAAGATAAGGTGCTCCAAAATTCATGTAACGAAAAAGTCAGGTCCCAAATATCCTCTCAAGAACTCTCTTTTTAGGAATACTTTCTTTTCCTTTCCAGCTAGGTAAAGCACAAAATAACCAAAATTCGCTGCCAAGGAATCCCTCGCCTGGAATGGGGATACACAACAGCCTGTTCTAATGCCTCGTGAATGTTTGAATTCTGCGCAAAGACTGAACTTATCAAAATTTTAAATGATTGAACATCTTAAAGAAAAAATAGATTTGAAGTCGAATAATGCTTAGGCCTTGATTAATACTTTTTTTATTTGTCACTTGATGCATTTAATTTTCTGTTTTCATCCACGCTAATTGTATTTATTTCCTATATCTGCTGCTGACACTTCTAAGTTTGAAAATATTCGCTTGAGCTTTCTATTGGCAGTTATGACTAAATAGAATTCACAGGATTACATTTTGCCGAATGCTTTTTGTTTATTGTGATCAGTCTTTGACACTCCTTAGTGGTGCACTTTTGCAGATTAGTGGATGCAATTCTTCTGATGGAAGGCCTGGCGTTATCACTTCTGCAAAGAGTGCAACATCATCATATATTGAAAGGTCATTATTGAAGATTCCACAACTTGATGGACCAATGCCTGATCCTTATGATGATGTGCTTTCAACACCTAATGTTAGCTCTCTCTCTTCTTCCCTTAAAGTTATAGAATCTGCTATCCTTGATACAAGGAATATTTATGTAATAGTAATAGAAATTTTGTACTTTTCACCCATCTTTTTACTTGTCTTGGTTTTGCAAGGTGGGTGCCTTTTCTTCAGATGGTTACTTGTCTGCCACTGTTTTTTTGATTATCCTTTCATCTTTTTGTAGAAGTCAGGCATCCATTCCATGTCTTCTTATAAGGATGTCCGTAGTCATAGAATGTTGTTTGATAGACAAAGCCTCGTGGAGCTAGGTACAAGGCACAAACTTGTCATGGACGTCATGAAAGCAGGGATTGTTTGCTCGAAAAAATTAGAACCTTCCTCAATGAAAACAAATTATAACTATCGAGTTACACACTTTGTCGTAGAAACAAATAGGCACACACAAAATAATGTTTAAAATGTCTGCTGTATGAGATACAAATGTGTTCAACCAAGAATTTTTGTATGTGATTTCCTGGCTTCCTTCTAATGGTTAATATTAGAGCTCATGAGGTGTTTGGCTTTTGTTTTTGATGGAAGACAGAAGATCATCGAATATTGCAAGATTCTGTGTTGGCTAAAATAACAAGCATATGTCAGTGTCCTCCCTCTTTGTAATATCTCAATTTCTTTCAGGACTTACCATCCCTCAACCAAGCAACCCATTGATATCACATTTCAATCCAAAATGAACACCACATGCTCACTAATACAACCAGTCCTCTCTGTAATATAAAAAATGATACGACACCGTCATAGTTACATGAAAGATGCTTATTTAAGTACTTGCCAATAGACAGCAACAAATCATTATGTTGCTTTTTCTTAAAGGTGCTAACAAATGTCCTCTTTAGTTGGTTATCAAGTAAAGGATGCAAAATTTTAGCCCCTGTAGATTAAATCTTAATCGATCTGTACTTTTCAGTATTTTGGAACTGCCTACTGCCTACAGTCTTCCATGATTGATGGCAGAGGAGTTTTCCTAGACCTGCACATTTTATATGGTCTTTTCAACTCTTTGCTCCTATTTATGGTCAAAATAACTCATTTTCTAGTCACAACTAATTACTTGTAACACAGGATTTCTCTGCTCACTATATTGGACTGAACATTCTAGGCATTTAAATACTTACTTGATTCTTCTTATGGTTTTTGTTGTGTCCATCCTATGCGTTATCTGGGTTGAATTTTTGTTCATCCTACTTCTTGATTATTAGAATTCTTCGTATCATAATTAATGGAGATGATTTTCTCATTGCTCTCTGCTCACTGAGTTGTGTTTTGTTATTCACATTTCTGACATCCCCTGCAGATATACAATTACCAGGGTGTCTTCAATGAAGACTACAACATAGCAAATACACCAGCACCTAATGGTAAATGTTATGAAGCGTTTCTTCATTATTGTGACTATTCTATGACATGGATGAAAATTTGGTTTTCTGTTGTTAGAGAACGATCCTGAAGGAAGGTTTTAAATTAAAAATTGGTTTTTAACTTTCATGTCGAAGTATTTTGTTGGTGTGCGGTTTGTAAATTGTCATAAATTTGTTTGTCTACCACGTTAAACATTGTGTATTGCATTTAATAGGGATCTTAAGTGGCTCTTTTAAACATAAAACATAAACATGATTACATAAATGCTGTATGCGGTTTAAAGCATGAACTTGCTGGGTATAATGTAAAATCTTACCAAAAAAAGCTATTGTTTTTATGTAATTCAATAATCAGAATAGAATGTTTGGGAGGACAAAAAACAGCAAGAGACAAGGGTGAAAACTAAGGTTCCCAAGAGAATTTAAAGCAGTAACAAAATTTGTCTCTAATTTTATTATGTTCCTGTTATCTTTTCTTTACAGACCCACCAGCTGGAACTCCTGCGGTTGTCACTCAGGATGATGTTAATGAAGAGGAGGAGGATAGTGAACCTTCATTGAACGAAGATGACGACGACGACGATTTGGATGATGTGGATCAAGGAGAGGAATTGAGCACACAGCATTTAGTTTTAGCTCAGTTTGACAAGGTACTTTACCTCCTGTTTTTTAGGTCCAGTTGTGCAGCATATCCTAGAGCATTTTTCAAACCTACCATGCCATCAAATATATATCATAACTTTTCATGTATTAGGTTACTCGTACCAAGAGTAGGTGGAAATGTACACTAAAAGATGGAATTATGCATATTAACAACAAGGACATTCTCTTCAACAAGGTGAATTTTCCCCTCCAAAACTACAGGCTAGAAATATTAAACCGAGTTCGGTTTTCATGGAAGCTTGGTTTGTTTGGTTTGGCAGGCAACTGGGGAATTCGACTTCTGATTTTTAATGGAGGCATCTTCATTGGGAGGTTTGGTTATATTGGTAGCAGCAGCAGTGTTGGGAAAGTTCATTGGGTGTTTAAGTTGTCTTCAGTTAATATTTGTTTTGTGAACGCTCGAGAGGACAAGGACATGTTGATGATTCTTCCTTATGTTCATTTTGATGAATGTTATTAGCGTTTTGTATATAACGAATGAGAGCTCTTTCGGCCTTCAATGAATGGCAACTTGAGGATTTTCGAGTAAAAATTTATTATTGCTCTAATGGAATATATTTGTAACTTCAATTTCTTATGCTCTTTGATTCTTC

mRNA sequence

TTTCGCCACGTGGATCTATGCATTATAATCGGATGCAAACCTATTTATATTCCACTCTTTATTCTCCCTTTCTTGTCCGCCTCTCTCCTCTTTCCCCCTTCTCTCTCTCTCCCTTCTTTCCCTCTCTTCTCTCTCTCTCTTCCTCTTCCTCCCCCCTTCCTCGCCCTCCTCCTCCCTTTTACTTCACATAACTCTACCAATCCAAGAACCTTATACGGATTCCATGGATCTTCTCCCTTGAATTCCCTCTCTAATTTTCTCCCAACACTAGATTTTTTCTGGGTTTTGGCTTGTGGAAGGAATCCGAGGTAGACAGAGCGCGAGGCGGATCCGTTATGGCGACTTCCACAAGCTCTATCTACATCAATGTCATCGAAGATGTTATCAACAAGCTTCGTGACGAGTTTGTTGATAATGGTCCTGGAGAAGACGTTCTCAAGGAGCTTCAAGGAATGTGGGAGGCGAAAATGATGCAAGCGGGTGCTGTGACTGGTCCTATAGAGAGGTCTGCACCATCTAAGCCTACACCCGGAGGTCCGATAACTCCGGTTCACGATCTTAATGTTCCGTATGAGGGTACTGAAGAGTACGAAACTCCCACGGCTGATTTACTCTTTCCACCGACGCCACTACAGACTCCAATTCAAACCCCTTTACCGGGGACTGCTGACAACGCGATGTATAATGTTCCTACTGGACCCAGCGACCACTCTGCATCTGGAACTGATGCTTCTCCAGCTGCCACCACTCCTGGGGGTAGCGGTAATAATAATGTTGAGGTCAGATCTGGAAGGCCAACCCCATATATGCAACCACCCTCTTGGATGGGTCAAAGAACTCCTGTAGACGTTAATATTGCCTACGTGGAGGGGCGTGAGGAAGCAGACAGGGGAGCTGCTGGCGCTCATCCATCCCTTACACAGGACTTTTTCATGATGAACTCGGGGAAGCGTAAGCGTGATGATTTTGCTTCCCAGTACCAAGCTAATGGGTTTATACCTCAGCAAGATGGAGCTGGAGATGCTGCCAATAGTGTTTTCGAGATTGAGATTAGTGGATGCAATTCTTCTGATGGAAGGCCTGGCGTTATCACTTCTGCAAAGAGTGCAACATCATCATATATTGAAAGGTCATTATTGAAGATTCCACAACTTGATGGACCAATGCCTGATCCTTATGATGATGTGCTTTCAACACCTAATATATACAATTACCAGGGTGTCTTCAATGAAGACTACAACATAGCAAATACACCAGCACCTAATGACCCACCAGCTGGAACTCCTGCGGTTGTCACTCAGGATGATGTTAATGAAGAGGAGGAGGATAGTGAACCTTCATTGAACGAAGATGACGACGACGACGATTTGGATGATGTGGATCAAGGAGAGGAATTGAGCACACAGCATTTAGTTTTAGCTCAGTTTGACAAGGTTACTCGTACCAAGAGTAGGTGGAAATGTACACTAAAAGATGGAATTATGCATATTAACAACAAGGACATTCTCTTCAACAAGGCAACTGGGGAATTCGACTTCTGATTTTTAATGGAGGCATCTTCATTGGGAGGTTTGGTTATATTGGTAGCAGCAGCAGTGTTGGGAAAGTTCATTGGGTGTTTAAGTTGTCTTCAGTTAATATTTGTTTTGTGAACGCTCGAGAGGACAAGGACATGTTGATGATTCTTCCTTATGTTCATTTTGATGAATGTTATTAGCGTTTTGTATATAACGAATGAGAGCTCTTTCGGCCTTCAATGAATGGCAACTTGAGGATTTTCGAGTAAAAATTTATTATTGCTCTAATGGAATATATTTGTAACTTCAATTTCTTATGCTCTTTGATTCTTC

Coding sequence (CDS)

ATGGCGACTTCCACAAGCTCTATCTACATCAATGTCATCGAAGATGTTATCAACAAGCTTCGTGACGAGTTTGTTGATAATGGTCCTGGAGAAGACGTTCTCAAGGAGCTTCAAGGAATGTGGGAGGCGAAAATGATGCAAGCGGGTGCTGTGACTGGTCCTATAGAGAGGTCTGCACCATCTAAGCCTACACCCGGAGGTCCGATAACTCCGGTTCACGATCTTAATGTTCCGTATGAGGGTACTGAAGAGTACGAAACTCCCACGGCTGATTTACTCTTTCCACCGACGCCACTACAGACTCCAATTCAAACCCCTTTACCGGGGACTGCTGACAACGCGATGTATAATGTTCCTACTGGACCCAGCGACCACTCTGCATCTGGAACTGATGCTTCTCCAGCTGCCACCACTCCTGGGGGTAGCGGTAATAATAATGTTGAGGTCAGATCTGGAAGGCCAACCCCATATATGCAACCACCCTCTTGGATGGGTCAAAGAACTCCTGTAGACGTTAATATTGCCTACGTGGAGGGGCGTGAGGAAGCAGACAGGGGAGCTGCTGGCGCTCATCCATCCCTTACACAGGACTTTTTCATGATGAACTCGGGGAAGCGTAAGCGTGATGATTTTGCTTCCCAGTACCAAGCTAATGGGTTTATACCTCAGCAAGATGGAGCTGGAGATGCTGCCAATAGTGTTTTCGAGATTGAGATTAGTGGATGCAATTCTTCTGATGGAAGGCCTGGCGTTATCACTTCTGCAAAGAGTGCAACATCATCATATATTGAAAGGTCATTATTGAAGATTCCACAACTTGATGGACCAATGCCTGATCCTTATGATGATGTGCTTTCAACACCTAATATATACAATTACCAGGGTGTCTTCAATGAAGACTACAACATAGCAAATACACCAGCACCTAATGACCCACCAGCTGGAACTCCTGCGGTTGTCACTCAGGATGATGTTAATGAAGAGGAGGAGGATAGTGAACCTTCATTGAACGAAGATGACGACGACGACGATTTGGATGATGTGGATCAAGGAGAGGAATTGAGCACACAGCATTTAGTTTTAGCTCAGTTTGACAAGGTTACTCGTACCAAGAGTAGGTGGAAATGTACACTAAAAGATGGAATTATGCATATTAACAACAAGGACATTCTCTTCAACAAGGCAACTGGGGAATTCGACTTCTGA

Protein sequence

MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGREEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEISGCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF

Homology

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BLAST of Cmc11g0300211 vs. NCBI nr
Match: XP_008464085.1 (PREDICTED: transcription initiation factor IIA subunit 1 [Cucumis melo])

HSP 1 Score: 796.2 bits (2055), Expect = 1.3e-226
Identity = 400/401 (99.75%), Postives = 400/401 (99.75%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTD SPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDDSPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEIS 240
           EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEIS
Sbjct: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEIS 240

Query: 241 GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 300
           GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED
Sbjct: 241 GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 300

Query: 301 YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV 360
           YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV
Sbjct: 301 YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV 360

Query: 361 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 361 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 401

[Close]

BLAST of Cmc11g0300211 vs. NCBI nr
Match: XP_004143132.2 (LOW QUALITY PROTEIN: transcription initiation factor IIA large subunit [Cucumis sativus])

HSP 1 Score: 786.2 bits (2029), Expect = 1.4e-223
Identity = 397/402 (98.76%), Postives = 398/402 (99.00%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPI  PLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIXNPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 EE-ADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240
           EE ADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI
Sbjct: 181 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240

Query: 241 SGCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300
           SGCNSSDGRPG ITSAKSATSS+IERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE
Sbjct: 241 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300

Query: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360
           DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL
Sbjct: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360

Query: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402

[Close]

BLAST of Cmc11g0300211 vs. NCBI nr
Match: XP_031745118.1 (LOW QUALITY PROTEIN: transcription initiation factor IIA subunit 1-like [Cucumis sativus])

HSP 1 Score: 786.2 bits (2029), Expect = 1.4e-223
Identity = 397/402 (98.76%), Postives = 398/402 (99.00%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQ PLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQXPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 EE-ADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240
           EE ADRGAAGAHPSLTQDFFMMN GKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI
Sbjct: 181 EEAADRGAAGAHPSLTQDFFMMNXGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240

Query: 241 SGCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300
           SGCNSSDGRPG ITSAKSATSS+IERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE
Sbjct: 241 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300

Query: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360
           DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL
Sbjct: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360

Query: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402

[Close]

BLAST of Cmc11g0300211 vs. NCBI nr
Match: KAA0061868.1 (transcription initiation factor IIA subunit 1 [Cucumis melo var. makuwa] >TYK15388.1 transcription initiation factor IIA subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 778.5 bits (2009), Expect = 2.8e-221
Identity = 392/394 (99.49%), Postives = 392/394 (99.49%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTD SPAATTPGGSGNNNV VRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDDSPAATTPGGSGNNNVVVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEIS 240
           EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEIS
Sbjct: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEIS 240

Query: 241 GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 300
           GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED
Sbjct: 241 GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 300

Query: 301 YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV 360
           YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV
Sbjct: 301 YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV 360

Query: 361 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 395
           LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK
Sbjct: 361 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 394

[Close]

BLAST of Cmc11g0300211 vs. NCBI nr
Match: XP_038901376.1 (transcription initiation factor IIA subunit 1-like [Benincasa hispida])

HSP 1 Score: 772.7 bits (1994), Expect = 1.5e-219
Identity = 386/401 (96.26%), Postives = 391/401 (97.51%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLR+EFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLREEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYN+PT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNIPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPAATTPGGS NNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDASPAATTPGGSTNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEIS 240
           +E DRGA GAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDA NSVFEIEIS
Sbjct: 181 DEPDRGATGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAVNSVFEIEIS 240

Query: 241 GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 300
           GCN+SDGRPG ITSAKS TSS+IERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED
Sbjct: 241 GCNASDGRPGFITSAKSPTSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 300

Query: 301 YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV 360
           YNIANTPAPNDPP  TPAVVTQDDV EEEED EPSLNEDDDDDDLDDVDQGEELSTQHLV
Sbjct: 301 YNIANTPAPNDPPVSTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEELSTQHLV 360

Query: 361 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 361 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 401

[Close]

BLAST of Cmc11g0300211 vs. ExPASy Swiss-Prot
Match: Q9USU9 (Transcription initiation factor IIA large subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=toa1 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 9.1e-13
Identity = 106/423 (25.06%), Postives = 164/423 (38.77%), Query Frame = 0


Query: 8   IYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAPSKPTPGG 67
           +Y +VI DVI   R +F +NG  +  L+ELQ +W++K++     T P  ++      P G
Sbjct: 9   VYHHVILDVIANSRSDFEENGVDDATLRELQNLWQSKLVATDVATFPWAQA------PVG 68

Query: 68  PITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPTGPSDHSA 127
              P+  L  P  G     T + D+   P    +PI   +   A  A+  + T    H  
Sbjct: 69  TF-PIGQLFDPVSG---LRTDSLDVT-APAVANSPILNNI--AAIRAVQQMDTFAQQHGN 128

Query: 128 SGTDASPAATTPGGSGN--------NNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEG 187
           S   + P  + P  + N         NV+       P+   PS+      +  N      
Sbjct: 129 SNYYSPPTPSLPQSATNISFDSSAIPNVQSNPNNTAPF---PSYSSNSLQLPTN------ 188

Query: 188 REEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANG-FIPQQDGAGDAANSVFEIE 247
            + AD      H +      + ++G+    D +S     G  +P Q       NS  + E
Sbjct: 189 -QTADSPIINDHSTAN----VTSTGQEHAPDSSSTNSFGGLLLPNQ-------NSPKKSE 248

Query: 248 ISGCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPN--------- 307
           +    SS+  P                S   +PQ DG + D  DD  S  N         
Sbjct: 249 LGETESSNTTPA--------------NSRNDVPQTDGAIHD-LDDAGSPSNFESNRFAIA 308

Query: 308 ---------IYNYQGVFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDD 367
                    +     +   D  I +      PP  TP              S+ ++N D 
Sbjct: 309 QKADAEIYEVLKKNRILQIDGTIEDNEDEKKPPVDTP--------------SDEAINSDL 368

Query: 368 DDDDLDDVDQGEELST--QHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGE 402
           DD D D+  + EE S   Q +VL  +DKV   K++WKC  +DG++ +N KD LF KA GE
Sbjct: 369 DDPDSDEAPETEEGSDIGQAIVLCLYDKVNHHKNKWKCVFRDGVVGVNGKDYLFFKANGE 368

[Close]

BLAST of Cmc11g0300211 vs. ExPASy Swiss-Prot
Match: O08949 (Transcription initiation factor IIA subunit 1 OS=Rattus norvegicus OX=10116 GN=Gtf2a1 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.6e-09
Identity = 104/415 (25.06%), Postives = 166/415 (40.00%), Query Frame = 0


Query: 8   IYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTG--------PIERSA 67
           +Y +VIEDVIN +RD F+D+G  E VL EL+ +WE K+MQ+ AV G         ++   
Sbjct: 13  LYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVDGFHSEEQQLLLQVQQ 72

Query: 68  PSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVP 127
             +P         H      + T   +  T  +L P +   T  Q  +P +      N  
Sbjct: 73  QHQPQQQQHHHHHHHQQAQPQQTVPQQAQTQQVLIPASQQATAPQVIVPDSKLIQHMNAS 132

Query: 128 TGPSDHSASGTDASPAATTP-----GGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNI 187
           +  S  + + T A PA  TP       SG     VR+     Y+  P    Q   +   +
Sbjct: 133 SITSAAATAATLALPAGVTPVQQILTNSGQLLQVVRAANGAQYIFQPQ---QSVVLQQQV 192

Query: 188 AYVEGREEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSV 247
                  +   G   A P + Q    +  G   +     Q       PQQ          
Sbjct: 193 I-----PQMQPGGVQA-PVIQQVLAPLPGGISPQTGVIIQ-------PQQ---------- 252

Query: 248 FEIEISGCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQ 307
             I  +G N +   P  + +   A +        +IP      P         P +    
Sbjct: 253 --ILFTG-NKTQVIPTTVAAPTPAQA--------QIPAAGQQQPQAQPAQQQAPLVLQVD 312

Query: 308 GVFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNED--------DDDDDLD 367
           G         +T +  D          +D  ++EEED E    ED        + +DD+ 
Sbjct: 313 GT-------GDTSSEEDEDE------EEDYDDDEEEDKEKDGAEDGQVEEEPLNSEDDVS 372

Query: 368 DVDQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           D +  E   T+++V+ Q+DK+ R+K++WK  LKDGIM++N +D +F+KA G+ ++
Sbjct: 373 DEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDAEW 377

[Close]

BLAST of Cmc11g0300211 vs. ExPASy Swiss-Prot
Match: Q54G80 (Transcription initiation factor IIA subunit 1 OS=Dictyostelium discoideum OX=44689 GN=gtf2a1 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.6e-09
Identity = 59/181 (32.60%), Postives = 86/181 (47.51%), Query Frame = 0


Query: 240 SGCNSSDGRPGVITSAKSATSSYIERSLLKI----PQLDGPMPDPYDDVLSTPNIY---N 299
           +G N+++       S+ S+ ++ +  SL  I    PQ DG + +  +D  +  N     N
Sbjct: 133 NGSNNNNNNNNSNNSSNSSNNNNLPSSLRSIMNPMPQNDGTLDESDNDDDNNNNNNDNDN 192

Query: 300 YQGVFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEE---------------EEDSEPSLN 359
                N D  I +    N    G   +   D +N++               EEDS  S  
Sbjct: 193 ENNKDNIDKLIIDGFKKNFNFNGDEVIPQNDGLNDDDDLDDEEIGGGGGKVEEDSLGSDL 252

Query: 360 EDDDDDDLDDVDQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATG 399
           +DDDDDD D +        +H VL Q++KV+R K++ KC  KDGIMH+N KD LFNKA G
Sbjct: 253 DDDDDDDPDPI-------IEHFVLCQYEKVSRIKNKRKCNFKDGIMHLNGKDTLFNKANG 306

[Close]

BLAST of Cmc11g0300211 vs. ExPASy Swiss-Prot
Match: P52655 (Transcription initiation factor IIA subunit 1 OS=Homo sapiens OX=9606 GN=GTF2A1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 7.9e-09
Identity = 108/422 (25.59%), Postives = 166/422 (39.34%), Query Frame = 0


Query: 8   IYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTG--------PIERSA 67
           +Y +VIEDVIN +RD F+D+G  E VL EL+ +WE K+MQ+ AV G         ++   
Sbjct: 13  LYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVDGFHSEEQQLLLQVQQ 72

Query: 68  PSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVP 127
             +P         H      + T   +  T  +L P +   T  Q  +P +      N  
Sbjct: 73  QHQPQQQQHHHHHHHQQAQPQQTVPQQAQTQQVLIPASQQATAPQVIVPDSKLIQHMNA- 132

Query: 128 TGPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEG 187
              S+ SA+ T A+ A   P G             TP  Q  +  GQ   V         
Sbjct: 133 ---SNMSAAATAATLA--LPAG------------VTPVQQILTNSGQLLQV--------- 192

Query: 188 REEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 247
                R A GA     Q  F      + +     Q Q    IPQ    G  A  + ++  
Sbjct: 193 ----VRAANGA-----QYIF------QPQQSVVLQQQV---IPQMQPGGVQAPVIQQVLA 252

Query: 248 SGCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 307
                   + GVI   +                  G         ++ P     Q     
Sbjct: 253 PLPGGISPQTGVIIQPQQIL-------------FTGNKTQVIPTTVAAPTPAQAQITATG 312

Query: 308 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDD---------------- 367
                  PA    P       T D  +EE+ED E   ++D+++D                
Sbjct: 313 QQQPQAQPAQTQAPLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEEPL 372

Query: 368 -DLDDV--DQGEEL-STQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEF 402
              DDV  ++G+EL  T+++V+ Q+DK+ R+K++WK  LKDGIM++N +D +F+KA G+ 
Sbjct: 373 NSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDA 376

[Close]

BLAST of Cmc11g0300211 vs. ExPASy Swiss-Prot
Match: P52654 (Transcription initiation factor IIA subunit 1 OS=Drosophila melanogaster OX=7227 GN=TfIIA-L PE=1 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 2.3e-08
Identity = 88/412 (21.36%), Postives = 166/412 (40.29%), Query Frame = 0


Query: 3   TSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAPSK 62
           TS   +Y  VIEDVI  +RD F+D G  E VL+E++ +W  K++ + AV    +    S 
Sbjct: 6   TSVLKVYHAVIEDVITNVRDAFLDEGVDEQVLQEMKQVWRNKLLASKAVELSPDSGDGSH 65

Query: 63  PTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPTGP 122
           P P           +     + ++   A             +     TA  +  ++    
Sbjct: 66  PPP-----------IVANNPKSHKAANA-----------KAKKAAAATAVTSHQHIGGNS 125

Query: 123 SDHSASGTDASPAATTPGGSGNNNV----EVRSGRPTPYMQPPSWMGQRTPVDVNIAYVE 182
           S  S  G  +S       G  N  V    EV S  P P + P S            + ++
Sbjct: 126 SMSSLVGLKSSAGMAAGSGIRNGLVPIKQEVNSQNPPP-LHPTS----------AASMMQ 185

Query: 183 GREEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIE 242
            +++A     G+ P +               D       N  +P   G+  + + V  I+
Sbjct: 186 KQQQAASSGQGSIPIVA------------TLDPNRIMPVNITLPSPAGSASSESRVLTIQ 245

Query: 243 ISGCNSSDGRPGVITSAKSATSSYIERSLLKIPQ--LDGPMPDPYDDVLSTPNIYNYQGV 302
           +      + +   I +A      ++  S++ +P       +    +  LS+ N       
Sbjct: 246 VPASALQENQLTQILTA------HLISSIMSLPTTLASSVLQQHVNAALSSANHQKTLAA 305

Query: 303 FNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNED-------DDDDDLDDVD 362
             +     ++   ++       +   DD + +++D E + +ED       + +DD+ D D
Sbjct: 306 AKQLDGALDSSDEDESEESDDNIDNDDDDDLDKDDDEDAEHEDAAEEEPLNSEDDVTDED 365

Query: 363 QGEELSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
             E   T ++++ Q+DK+TR++++WK  LKDGIM++  KD +F K+ G+ ++
Sbjct: 366 SAEMFDTDNVIVCQYDKITRSRNKWKFYLKDGIMNMRGKDYVFQKSNGDAEW 366

[Close]

BLAST of Cmc11g0300211 vs. ExPASy TrEMBL
Match: A0A1S3CM61 (transcription initiation factor IIA subunit 1 OS=Cucumis melo OX=3656 GN=LOC103502057 PE=3 SV=1)

HSP 1 Score: 796.2 bits (2055), Expect = 6.3e-227
Identity = 400/401 (99.75%), Postives = 400/401 (99.75%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTD SPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDDSPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEIS 240
           EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEIS
Sbjct: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEIS 240

Query: 241 GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 300
           GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED
Sbjct: 241 GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 300

Query: 301 YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV 360
           YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV
Sbjct: 301 YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV 360

Query: 361 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 361 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 401

[Close]

BLAST of Cmc11g0300211 vs. ExPASy TrEMBL
Match: A0A0A0KE66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188660 PE=3 SV=1)

HSP 1 Score: 790.4 bits (2040), Expect = 3.5e-225
Identity = 399/402 (99.25%), Postives = 400/402 (99.50%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP
Sbjct: 135 MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 194

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 195 SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 254

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 255 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 314

Query: 181 EE-ADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 240
           EE ADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI
Sbjct: 315 EEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 374

Query: 241 SGCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 300
           SGCNSSDGRPG ITSAKSATSS+IERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE
Sbjct: 375 SGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 434

Query: 301 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 360
           DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL
Sbjct: 435 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 494

Query: 361 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 495 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 536

[Close]

BLAST of Cmc11g0300211 vs. ExPASy TrEMBL
Match: A0A5D3CVW1 (Transcription initiation factor IIA subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00280 PE=3 SV=1)

HSP 1 Score: 778.5 bits (2009), Expect = 1.4e-221
Identity = 392/394 (99.49%), Postives = 392/394 (99.49%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP
Sbjct: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTD SPAATTPGGSGNNNV VRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDDSPAATTPGGSGNNNVVVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180

Query: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEIS 240
           EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEIS
Sbjct: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEIS 240

Query: 241 GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 300
           GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED
Sbjct: 241 GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 300

Query: 301 YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV 360
           YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV
Sbjct: 301 YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV 360

Query: 361 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 395
           LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK
Sbjct: 361 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 394

[Close]

BLAST of Cmc11g0300211 vs. ExPASy TrEMBL
Match: A0A6J1FXQ4 (transcription initiation factor IIA large subunit-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448672 PE=3 SV=1)

HSP 1 Score: 737.6 bits (1903), Expect = 2.7e-209
Identity = 371/401 (92.52%), Postives = 383/401 (95.51%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MA STSSIYINVIEDV+NKLRDEF DNGPGEDVLKELQGMWEAKMMQAGAV GPIERSAP
Sbjct: 1   MAISTSSIYINVIEDVVNKLRDEFTDNGPGEDVLKELQGMWEAKMMQAGAVNGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPA TTPGGS  +NV+VRSGRPT +MQPPSWMGQ+ PVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDASPAVTTPGGSA-SNVDVRSGRPTQFMQPPSWMGQKAPVDVNIAYVEGR 180

Query: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEIS 240
           +EADRG    HP+LTQDFFMMNSGKRKRD FASQYQ NGFIPQQDGAGDAANSVFEIEIS
Sbjct: 181 DEADRGV--PHPALTQDFFMMNSGKRKRDGFASQYQTNGFIPQQDGAGDAANSVFEIEIS 240

Query: 241 GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 300
           GCN+SDGRPGVITSAKSAT ++IERSL KIPQLDGP+PDPYDDVLSTPNIYNYQGVFNED
Sbjct: 241 GCNASDGRPGVITSAKSATLTHIERSLFKIPQLDGPIPDPYDDVLSTPNIYNYQGVFNED 300

Query: 301 YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV 360
           YNIANTPAPNDPPAGTPAVVTQDDV EEEED EPSLNEDDDDDDLDDVDQGEE+STQHLV
Sbjct: 301 YNIANTPAPNDPPAGTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEEVSTQHLV 360

Query: 361 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 361 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 398

[Close]

BLAST of Cmc11g0300211 vs. ExPASy TrEMBL
Match: A0A6J1JHB9 (transcription initiation factor IIA large subunit-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484486 PE=3 SV=1)

HSP 1 Score: 736.1 bits (1899), Expect = 7.8e-209
Identity = 370/401 (92.27%), Postives = 383/401 (95.51%), Query Frame = 0


Query: 1   MATSTSSIYINVIEDVINKLRDEFVDNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60
           MA STSSIYINVIEDV+NKLRDEF DNGPGEDVLKELQGMWEAKMMQAGAV GPIERSAP
Sbjct: 1   MAISTSSIYINVIEDVVNKLRDEFTDNGPGEDVLKELQGMWEAKMMQAGAVNGPIERSAP 60

Query: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120
           SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT
Sbjct: 61  SKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADNAMYNVPT 120

Query: 121 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPSWMGQRTPVDVNIAYVEGR 180
           GPSDHSASGTDASPA TTPGGS  +NV+VRSGRPT +MQPPSWMGQ+ PVDVNIAYVEGR
Sbjct: 121 GPSDHSASGTDASPAVTTPGGSA-SNVDVRSGRPTQFMQPPSWMGQKAPVDVNIAYVEGR 180

Query: 181 EEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEIS 240
           +EADRG    HP+LTQDFFMMNSGKRKRD FASQYQ NGFIPQQDGAGDAANSVFEIEIS
Sbjct: 181 DEADRGV--PHPALTQDFFMMNSGKRKRDGFASQYQTNGFIPQQDGAGDAANSVFEIEIS 240

Query: 241 GCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNED 300
           GCN+SDGRPGVITSAKSAT ++I+RSL KIPQLDGP+PDPYDDVLSTPNIYNYQGVFNED
Sbjct: 241 GCNASDGRPGVITSAKSATLTHIKRSLFKIPQLDGPIPDPYDDVLSTPNIYNYQGVFNED 300

Query: 301 YNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLV 360
           YNIANTPAPNDPPAGTPAVVTQDDV EEEED EPSLNEDDDDDDLDDVDQGEE+STQHLV
Sbjct: 301 YNIANTPAPNDPPAGTPAVVTQDDVGEEEEDDEPSLNEDDDDDDLDDVDQGEEVSTQHLV 360

Query: 361 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 361 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 398

[Close]

BLAST of Cmc11g0300211 vs. TAIR 10
Match: AT1G07480.1 (Transcription factor IIA, alpha/beta subunit )

HSP 1 Score: 442.2 bits (1136), Expect = 4.5e-124
Identity = 245/405 (60.49%), Postives = 299/405 (73.83%), Query Frame = 0


Query: 3   TSTSSIYINVIEDVINKLRDEFVDN-GPGEDVLKELQGMWEAKMMQAGAVTGPIERSAPS 62
           T+TS++YI+VIEDV+NK+R+EF++N GPGE VL ELQG+WE KMMQAG + GPIERS+  
Sbjct: 5   TTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSSAQ 64

Query: 63  KPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADN-AMYNVPT 122
           KPTPGGP+T  HDLNVPYEGTEEYETPTA++LFPPTPLQTP+ TPLPGTADN +MYN+PT
Sbjct: 65  KPTPGGPLT--HDLNVPYEGTEEYETPTAEMLFPPTPLQTPLPTPLPGTADNSSMYNIPT 124

Query: 123 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPS-WMGQRTPVDVNIAYVEG 182
           G SD+            TPG     N++V++ RP+PYM PPS W   R  +DVN+AYV+G
Sbjct: 125 GSSDY-----------PTPGTENGVNIDVKA-RPSPYMPPPSPWTNPR--LDVNVAYVDG 184

Query: 183 REEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDA-ANSVFEIE 242
           R+E +RG   ++   TQD F+ +SGKRKRDD +  YQ  G IPQQDGAGDA   + FE +
Sbjct: 185 RDEPERG--NSNQQFTQDLFVPSSGKRKRDDSSGHYQNGGSIPQQDGAGDAIPEANFECD 244

Query: 243 ISGCNSSDGR--PGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGV 302
                S   R  P    S+ S           KIPQ+DGPMPDPYD++LSTPNIY+YQG 
Sbjct: 245 AFRITSIGDRKVPRDFFSSSS-----------KIPQVDGPMPDPYDEMLSTPNIYSYQGP 304

Query: 303 FNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELST 362
            +E++N A TPAPN+    TP  V  D +    ED E  LNEDDDDD+LDD++ GE+++T
Sbjct: 305 -SEEFNEARTPAPNEIQTSTPVAVQNDII----EDDEELLNEDDDDDELDDLESGEDMNT 364

Query: 363 QHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           QHLVLAQFDKVTRTKSRWKC+LKDGIMHIN+KDILFNKA GEFDF
Sbjct: 365 QHLVLAQFDKVTRTKSRWKCSLKDGIMHINDKDILFNKAAGEFDF 375

[Close]

BLAST of Cmc11g0300211 vs. TAIR 10
Match: AT1G07480.2 (Transcription factor IIA, alpha/beta subunit )

HSP 1 Score: 442.2 bits (1136), Expect = 4.5e-124
Identity = 245/405 (60.49%), Postives = 299/405 (73.83%), Query Frame = 0


Query: 3   TSTSSIYINVIEDVINKLRDEFVDN-GPGEDVLKELQGMWEAKMMQAGAVTGPIERSAPS 62
           T+TS++YI+VIEDV+NK+R+EF++N GPGE VL ELQG+WE KMMQAG + GPIERS+  
Sbjct: 5   TTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSSAQ 64

Query: 63  KPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADN-AMYNVPT 122
           KPTPGGP+T  HDLNVPYEGTEEYETPTA++LFPPTPLQTP+ TPLPGTADN +MYN+PT
Sbjct: 65  KPTPGGPLT--HDLNVPYEGTEEYETPTAEMLFPPTPLQTPLPTPLPGTADNSSMYNIPT 124

Query: 123 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPS-WMGQRTPVDVNIAYVEG 182
           G SD+            TPG     N++V++ RP+PYM PPS W   R  +DVN+AYV+G
Sbjct: 125 GSSDY-----------PTPGTENGVNIDVKA-RPSPYMPPPSPWTNPR--LDVNVAYVDG 184

Query: 183 REEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDA-ANSVFEIE 242
           R+E +RG   ++   TQD F+ +SGKRKRDD +  YQ  G IPQQDGAGDA   + FE +
Sbjct: 185 RDEPERG--NSNQQFTQDLFVPSSGKRKRDDSSGHYQNGGSIPQQDGAGDAIPEANFECD 244

Query: 243 ISGCNSSDGR--PGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGV 302
                S   R  P    S+ S           KIPQ+DGPMPDPYD++LSTPNIY+YQG 
Sbjct: 245 AFRITSIGDRKVPRDFFSSSS-----------KIPQVDGPMPDPYDEMLSTPNIYSYQGP 304

Query: 303 FNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELST 362
            +E++N A TPAPN+    TP  V  D +    ED E  LNEDDDDD+LDD++ GE+++T
Sbjct: 305 -SEEFNEARTPAPNEIQTSTPVAVQNDII----EDDEELLNEDDDDDELDDLESGEDMNT 364

Query: 363 QHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           QHLVLAQFDKVTRTKSRWKC+LKDGIMHIN+KDILFNKA GEFDF
Sbjct: 365 QHLVLAQFDKVTRTKSRWKCSLKDGIMHINDKDILFNKAAGEFDF 375

[Close]

BLAST of Cmc11g0300211 vs. TAIR 10
Match: AT1G07470.1 (Transcription factor IIA, alpha/beta subunit )

HSP 1 Score: 441.4 bits (1134), Expect = 7.6e-124
Identity = 242/402 (60.20%), Postives = 295/402 (73.38%), Query Frame = 0


Query: 3   TSTSSIYINVIEDVINKLRDEFVDN-GPGEDVLKELQGMWEAKMMQAGAVTGPIERSAPS 62
           T+TS++YI+VIEDV+NK+R+EF++N GPGE VL ELQG+WE KMMQAG + GPIERS+  
Sbjct: 5   TTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSSAQ 64

Query: 63  KPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQTPLPGTADN-AMYNVPT 122
           KPTPGGP+T  HDLNVPYEGTEEYETPTA++LFPPTPLQTP+ TPLPGTADN +MYN+PT
Sbjct: 65  KPTPGGPLT--HDLNVPYEGTEEYETPTAEMLFPPTPLQTPLPTPLPGTADNSSMYNIPT 124

Query: 123 GPSDHSASGTDASPAATTPGGSGNNNVEVRSGRPTPYMQPPS-WMGQRTPVDVNIAYVEG 182
           G SD+            TPG     N++V++ RP+PYM PPS W   R  +DVN+AYV+G
Sbjct: 125 GSSDY-----------PTPGTENGVNIDVKA-RPSPYMPPPSPWTNPR--LDVNVAYVDG 184

Query: 183 REEADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEI 242
           R+E +RG   ++   TQD F+ +SGKRKRDD ++ YQ  G IPQQDGA DA        I
Sbjct: 185 RDEPERG--NSNQQFTQDLFVPSSGKRKRDDSSAHYQNGGSIPQQDGASDA--------I 244

Query: 243 SGCNSSDGRPGVITSAKSATSSYIERSLLKIPQLDGPMPDPYDDVLSTPNIYNYQGVFNE 302
              N       +           +  S  KIPQ+DGPMPDPYD++LSTPNIY+YQG  NE
Sbjct: 245 PEANFECAALRITYVGDRKIPRDLIGSSSKIPQVDGPMPDPYDEMLSTPNIYSYQGP-NE 304

Query: 303 DYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHL 362
           ++N A TPAPN+    TP  V  D +    ED E  LNEDDDDD+LDD++ GE+++TQHL
Sbjct: 305 EFNEARTPAPNEIQTSTPVAVPNDII----EDDEELLNEDDDDDELDDLESGEDMNTQHL 364

Query: 363 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 402
           VLAQFDKVTRTKSRWKC+LKDGIMHIN+KDILFNKATGEFDF
Sbjct: 365 VLAQFDKVTRTKSRWKCSLKDGIMHINDKDILFNKATGEFDF 375

[Close]

BLAST of Cmc11g0300211 vs. TAIR 10
Match: AT5G59230.1 (transcription factor-related )

HSP 1 Score: 73.9 bits (180), Expect = 3.2e-13
Identity = 37/80 (46.25%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 322 QDDVNEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDG 381
           +D+   + +++E  LNEDDDD++ DD+D  ++++ QHLV+ QFDKV R+K++W+C    G
Sbjct: 109 RDEAIVDVDENEEPLNEDDDDEE-DDIDD-DDMNIQHLVMCQFDKVKRSKNKWECKFNAG 168

Query: 382 IMHINNKDILFNKATGEFDF 402
           +M IN K++LF++ATG+F+F
Sbjct: 169 VMQINGKNVLFSQATGDFNF 186

The following BLAST results are available for this feature:

BLAST of Cmc11g0300211 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464085.1	1.3e-226	99.75	PREDICTED: transcription initiation factor IIA subunit 1 [Cucumis melo]	[more]
XP_004143132.2	1.4e-223	98.76	LOW QUALITY PROTEIN: transcription initiation factor IIA large subunit [Cucumis ...	[more]
XP_031745118.1	1.4e-223	98.76	LOW QUALITY PROTEIN: transcription initiation factor IIA subunit 1-like [Cucumis...	[more]
KAA0061868.1	2.8e-221	99.49	transcription initiation factor IIA subunit 1 [Cucumis melo var. makuwa] >TYK153...	[more]
XP_038901376.1	1.5e-219	96.26	transcription initiation factor IIA subunit 1-like [Benincasa hispida]	[more]

BLAST of Cmc11g0300211 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9USU9	9.1e-13	25.06	Transcription initiation factor IIA large subunit OS=Schizosaccharomyces pombe (...	[more]
O08949	1.6e-09	25.06	Transcription initiation factor IIA subunit 1 OS=Rattus norvegicus OX=10116 GN=G...	[more]
Q54G80	3.6e-09	32.60	Transcription initiation factor IIA subunit 1 OS=Dictyostelium discoideum OX=446...	[more]
P52655	7.9e-09	25.59	Transcription initiation factor IIA subunit 1 OS=Homo sapiens OX=9606 GN=GTF2A1 ...	[more]
P52654	2.3e-08	21.36	Transcription initiation factor IIA subunit 1 OS=Drosophila melanogaster OX=7227...	[more]

BLAST of Cmc11g0300211 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CM61	6.3e-227	99.75	transcription initiation factor IIA subunit 1 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A0A0KE66	3.5e-225	99.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188660 PE=3 SV=1	[more]
A0A5D3CVW1	1.4e-221	99.49	Transcription initiation factor IIA subunit 1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1FXQ4	2.7e-209	92.52	transcription initiation factor IIA large subunit-like isoform X2 OS=Cucurbita m...	[more]
A0A6J1JHB9	7.8e-209	92.27	transcription initiation factor IIA large subunit-like isoform X2 OS=Cucurbita m...	[more]

BLAST of Cmc11g0300211 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07480.1	4.5e-124	60.49	Transcription factor IIA, alpha/beta subunit	[more]
AT1G07480.2	4.5e-124	60.49	Transcription factor IIA, alpha/beta subunit	[more]
AT1G07470.1	7.6e-124	60.20	Transcription factor IIA, alpha/beta subunit	[more]
AT5G59230.1	3.2e-13	46.25	transcription factor-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004855	Transcription factor IIA, alpha/beta subunit	SMART	SM01371	TFIIA_2	coord: 7..401 e-value: 9.4E-101 score: 350.7
IPR004855	Transcription factor IIA, alpha/beta subunit	PFAM	PF03153	TFIIA	coord: 8..211 e-value: 4.8E-16 score: 59.8 coord: 266..400 e-value: 1.5E-31 score: 110.8
IPR004855	Transcription factor IIA, alpha/beta subunit	PANTHER	PTHR12694	TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1	coord: 2..401
IPR009088	Transcription factor IIA, beta-barrel	GENE3D	2.30.18.10		coord: 335..401 e-value: 8.0E-26 score: 91.3
IPR009088	Transcription factor IIA, beta-barrel	SUPERFAMILY	50784	Transcription factor IIA (TFIIA), beta-barrel domain	coord: 344..401
None	No IPR available	GENE3D	1.10.287.100		coord: 1..53 e-value: 1.6E-20 score: 74.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 302..349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 323..349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..152
None	No IPR available	PANTHER	PTHR12694:SF16	BNAC08G45360D PROTEIN	coord: 2..401
None	No IPR available	CDD	cd07976	TFIIA_alpha_beta_like	coord: 5..62 e-value: 6.10296E-17 score: 73.7127
None	No IPR available	CDD	cd07976	TFIIA_alpha_beta_like	coord: 356..401 e-value: 2.18799E-27 score: 102.603
None	No IPR available	SUPERFAMILY	47396	Transcription factor IIA (TFIIA), alpha-helical domain	coord: 4..46

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0300211.1	Cmc11g0300211.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
cellular_component	GO:0005672	transcription factor TFIIA complex