Homology
BLAST of Cmc11g0297741 vs. NCBI nr
Match:
KAA0062200.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 463.4 bits (1191), Expect = 1.1e-126
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
Query: 1 MKDLGNAQYVLGIQIVRNRKNSTLANPSHVSRYKMQNSKKGLLPYRYAIHLSKEQCPKTP 60
MKDLGNAQYVLGIQIVRNRKNSTLANPSHVSRYKMQNSKKGLLPYRYAIHLSKEQCPKTP
Sbjct: 1 MKDLGNAQYVLGIQIVRNRKNSTLANPSHVSRYKMQNSKKGLLPYRYAIHLSKEQCPKTP 60
Query: 61 QEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNILKYLRR 120
QEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNILKYLRR
Sbjct: 61 QEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNILKYLRR 120
Query: 121 IKDYMLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSCIVGSTM 180
IKDYMLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSCIVGSTM
Sbjct: 121 IKDYMLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSCIVGSTM 180
Query: 181 EAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGAVANS 228
EAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGAVANS
Sbjct: 181 EAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGAVANS 227
BLAST of Cmc11g0297741 vs. NCBI nr
Match:
KAA0046768.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 385.6 bits (989), Expect = 3.0e-103
Identity = 194/233 (83.26%), Postives = 203/233 (87.12%), Query Frame = 0
Query: 1 MKDLGNAQYVLGIQIVRNRKNSTLA--NPSHV----SRYKMQNSKKGLLPYRYAIHLSKE 60
MK LGNAQYVLGIQIVRN KN TLA S++ SRYKMQNSKKGLLPYRY I LSKE
Sbjct: 302 MKYLGNAQYVLGIQIVRNEKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIDLSKE 361
Query: 61 QCPKTPQEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNI 120
QCPKTPQEVEDMSNIPYAS +GSLMYA+LCT+PDI YS+ IVSRYQSNPRRDHWT KNI
Sbjct: 362 QCPKTPQEVEDMSNIPYASAIGSLMYAMLCTRPDICYSVGIVSRYQSNPRRDHWTAVKNI 421
Query: 121 LKYLRRIKDYMLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSC 180
LKY RR KDYMLVYGS DLI TGYTDSDFQTDKDAR T GS+FTLNG VVWRSIKQSC
Sbjct: 422 LKYHRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTLGSVFTLNGAAVVWRSIKQSC 481
Query: 181 IVGSTMEAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGAVANS 228
I STMEA YVAACEA+KEAVWLKKFLTDLEVVPNMH+PITLYCDNSGAVANS
Sbjct: 482 IADSTMEAGYVAACEASKEAVWLKKFLTDLEVVPNMHLPITLYCDNSGAVANS 534
BLAST of Cmc11g0297741 vs. NCBI nr
Match:
ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])
HSP 1 Score: 383.3 bits (983), Expect = 1.5e-102
Identity = 188/233 (80.69%), Postives = 206/233 (88.41%), Query Frame = 0
Query: 1 MKDLGNAQYVLGIQIVRNRKNSTLA--NPSHV----SRYKMQNSKKGLLPYRYAIHLSKE 60
MKDLG AQY+LGIQIVRNRKN TLA S++ SRYKMQNSKKG LP+R+ IHLSKE
Sbjct: 1028 MKDLGEAQYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKE 1087
Query: 61 QCPKTPQEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNI 120
QCPKTPQEVEDM NIPY+S VGSLMYA+LCT+PDI YS+ IVSRYQSNP RDHWT KNI
Sbjct: 1088 QCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNI 1147
Query: 121 LKYLRRIKDYMLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSC 180
LKYLRR ++YMLVYG+ DLI TGYTDSDFQ+DKDAR TSGS+FTLNGG VVWRS+KQ+C
Sbjct: 1148 LKYLRRTRNYMLVYGAKDLILTGYTDSDFQSDKDARKSTSGSVFTLNGGAVVWRSVKQTC 1207
Query: 181 IVGSTMEAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGAVANS 228
I STMEAEYVAACEAAKEAVWL+KFLTDLEVVPNMH+PITLYCDNSGAVANS
Sbjct: 1208 IADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVANS 1260
BLAST of Cmc11g0297741 vs. NCBI nr
Match:
TYK03644.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 378.3 bits (970), Expect = 4.8e-101
Identity = 189/233 (81.12%), Postives = 199/233 (85.41%), Query Frame = 0
Query: 1 MKDLGNAQYVLGIQIVRNRKNSTLA--NPSHV----SRYKMQNSKKGLLPYRYAIHLSKE 60
MKDLGNAQYVLG+QIVRNRKN TLA S++ SRYKM NSKKGLLPYRY IHLSKE
Sbjct: 452 MKDLGNAQYVLGVQIVRNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKE 511
Query: 61 QCPKTPQEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNI 120
QCPKTPQEVEDMSNIPYAS VGSLMY +LCT+P+I YS+ IVSR QS P RDHWT KNI
Sbjct: 512 QCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICYSVGIVSRCQSKPGRDHWTTVKNI 571
Query: 121 LKYLRRIKDYMLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSC 180
LKYLRR KDYMLVYGS DLI TGYTD FQTDKDAR TSG +FT+NGG VVWRSIKQSC
Sbjct: 572 LKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNGGAVVWRSIKQSC 631
Query: 181 IVGSTMEAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGAVANS 228
I STMEAEYVA CEAAKEAVWLKKFLTDLEVVPNMH+P TLYCDNSGAV NS
Sbjct: 632 IADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPFTLYCDNSGAVVNS 684
BLAST of Cmc11g0297741 vs. NCBI nr
Match:
KAA0050132.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 378.3 bits (970), Expect = 4.8e-101
Identity = 191/233 (81.97%), Postives = 198/233 (84.98%), Query Frame = 0
Query: 1 MKDLGNAQYVLGIQIVRNRKNSTLA------NPSHVSRYKMQNSKKGLLPYRYAIHLSKE 60
MKDLGNAQYVLGIQIVRNRKN TLA +SRYKMQN KK LL YRY IHLSKE
Sbjct: 48 MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYMDKMLSRYKMQNFKKALLSYRYGIHLSKE 107
Query: 61 QCPKTPQEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNI 120
QCPKTPQEVEDMSNI YA VGSLMYA+LCT+PDI YS+ IVSRYQSNP RDHWT KNI
Sbjct: 108 QCPKTPQEVEDMSNISYAYAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAIKNI 167
Query: 121 LKYLRRIKDYMLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSC 180
LKYLRR KDYMLVYGS DLI GYTDSDFQTDKDAR TSGS+FTLNGG VVWRSIKQSC
Sbjct: 168 LKYLRRTKDYMLVYGSKDLILIGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSC 227
Query: 181 IVGSTMEAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGAVANS 228
I STME EYVAACEAAK+AVWLKKFLTDLE VPNMH+ ITLYCDNSGAVANS
Sbjct: 228 IADSTMEVEYVAACEAAKKAVWLKKFLTDLEGVPNMHLSITLYCDNSGAVANS 280
BLAST of Cmc11g0297741 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 190.7 bits (483), Expect = 1.9e-47
Identity = 98/230 (42.61%), Postives = 142/230 (61.74%), Query Frame = 0
Query: 1 MKDLGNAQYVLGIQIVRNRKNSTLANPSH------VSRYKMQNSKKGLLPYRYAIHLSKE 60
MKDLG AQ +LG++IVR R + L + R+ M+N+K P + LSK+
Sbjct: 1035 MKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKK 1094
Query: 61 QCPKTPQEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNI 120
CP T +E +M+ +PY+S VGSLMYA++CT+PDI +++ +VSR+ NP ++HW K I
Sbjct: 1095 MCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWI 1154
Query: 121 LKYLRRIKDYMLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSC 180
L+YLR L +G D I GYTD+D D D R ++G LFT +GG + W+S Q C
Sbjct: 1155 LRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKC 1214
Query: 181 IVGSTMEAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGAV 225
+ ST EAEY+AA E KE +WLK+FL +L + ++ +YCD+ A+
Sbjct: 1215 VALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYV---VYCDSQSAI 1261
BLAST of Cmc11g0297741 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 116.7 bits (291), Expect = 3.4e-25
Identity = 75/238 (31.51%), Postives = 121/238 (50.84%), Query Frame = 0
Query: 1 MKDLGNAQYVLGIQIVRNRKNSTLANPSHV----SRYKMQNSKKGLLP----YRYAIHLS 60
M DL ++ +GI+I L+ ++V S++ M+N P Y + S
Sbjct: 1114 MTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNS 1173
Query: 61 KEQCPKTPQEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAK 120
E C N P S +G LMY +LCT+PD+ ++ I+SRY S + W K
Sbjct: 1174 DEDC-----------NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLK 1233
Query: 121 NILKYLRRIKDYMLVYGSMDLIF----TGYTDSDFQTDKDARNFTSGSLFTL-NGGVVVW 180
+L+YL+ D L++ +L F GY DSD+ + R T+G LF + + ++ W
Sbjct: 1234 RVLRYLKGTIDMKLIF-KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICW 1293
Query: 181 RSIKQSCIVGSTMEAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGAVA 226
+ +Q+ + S+ EAEY+A EA +EA+WLK LT + + + PI +Y DN G ++
Sbjct: 1294 NTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI--KLENPIKIYEDNQGCIS 1337
BLAST of Cmc11g0297741 vs. ExPASy Swiss-Prot
Match:
P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 4.5e-25
Identity = 58/135 (42.96%), Postives = 88/135 (65.19%), Query Frame = 0
Query: 66 MSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNILKYLRRIKDYM 125
M N+PY S VG++MY ++ T+PD+ ++ ++S++ S+P HW K +L+YL+ + Y
Sbjct: 1 MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60
Query: 126 LVY---GSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSCIVGSTMEA 185
L + G+ L+ GY+D+D+ D ++R TSG LF LNGG V WRS KQ + S+ E
Sbjct: 61 LEFTRAGTAKLV--GYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTED 120
Query: 186 EYVAACEAAKEAVWL 198
EY+A EA +EAVWL
Sbjct: 121 EYMALSEATQEAVWL 133
BLAST of Cmc11g0297741 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 95.1 bits (235), Expect = 1.1e-18
Identity = 67/228 (29.39%), Postives = 106/228 (46.49%), Query Frame = 0
Query: 1 MKDLGNAQYVLGIQIVRNRKNSTLANPSH----VSRYKMQNSKKGLLPYRYAIHLSKEQC 60
+K+ + Y LGI+ R + L+ + ++R M +K P + L+
Sbjct: 1160 VKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSG 1219
Query: 61 PKTPQEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNILK 120
K P E Y VGSL Y + T+PD+ Y++ +S+Y P DHW K +L+
Sbjct: 1220 TKLPDPTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLR 1279
Query: 121 YLRRIKDY-MLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSCI 180
YL D+ + + L Y+D+D+ D D T+G + L + W S KQ +
Sbjct: 1280 YLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGV 1339
Query: 181 VGSTMEAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGA 224
V S+ EAEY + + E W+ LT+L + + P +YCDN GA
Sbjct: 1340 VRSSTEAEYRSVANTSSELQWICSLLTELGI--QLSHPPVIYCDNVGA 1378
BLAST of Cmc11g0297741 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 86.7 bits (213), Expect = 3.8e-16
Identity = 67/228 (29.39%), Postives = 103/228 (45.18%), Query Frame = 0
Query: 1 MKDLGNAQYVLGIQIVRNRKNSTLANPSHV----SRYKMQNSKKGLLPYRYAIHLSKEQC 60
+KD Y LGI+ R L+ ++ +R M +K P + LS
Sbjct: 1177 VKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSG 1236
Query: 61 PKTPQEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNILK 120
K E Y VGSL Y + T+PDI Y++ +S++ P +H K IL+
Sbjct: 1237 TKLTDPTE------YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILR 1296
Query: 121 YLRRIKDY-MLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSCI 180
YL ++ + + L Y+D+D+ DKD T+G + L + W S KQ +
Sbjct: 1297 YLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGV 1356
Query: 181 VGSTMEAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGA 224
V S+ EAEY + + E W+ LT+L + + P +YCDN GA
Sbjct: 1357 VRSSTEAEYRSVANTSSEMQWICSLLTELGI--RLTRPPVIYCDNVGA 1395
BLAST of Cmc11g0297741 vs. ExPASy TrEMBL
Match:
A0A5A7V4I1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005980 PE=4 SV=1)
HSP 1 Score: 463.4 bits (1191), Expect = 5.5e-127
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
Query: 1 MKDLGNAQYVLGIQIVRNRKNSTLANPSHVSRYKMQNSKKGLLPYRYAIHLSKEQCPKTP 60
MKDLGNAQYVLGIQIVRNRKNSTLANPSHVSRYKMQNSKKGLLPYRYAIHLSKEQCPKTP
Sbjct: 1 MKDLGNAQYVLGIQIVRNRKNSTLANPSHVSRYKMQNSKKGLLPYRYAIHLSKEQCPKTP 60
Query: 61 QEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNILKYLRR 120
QEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNILKYLRR
Sbjct: 61 QEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNILKYLRR 120
Query: 121 IKDYMLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSCIVGSTM 180
IKDYMLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSCIVGSTM
Sbjct: 121 IKDYMLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSCIVGSTM 180
Query: 181 EAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGAVANS 228
EAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGAVANS
Sbjct: 181 EAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGAVANS 227
BLAST of Cmc11g0297741 vs. ExPASy TrEMBL
Match:
A0A5A7TV73 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00520 PE=4 SV=1)
HSP 1 Score: 385.6 bits (989), Expect = 1.5e-103
Identity = 194/233 (83.26%), Postives = 203/233 (87.12%), Query Frame = 0
Query: 1 MKDLGNAQYVLGIQIVRNRKNSTLA--NPSHV----SRYKMQNSKKGLLPYRYAIHLSKE 60
MK LGNAQYVLGIQIVRN KN TLA S++ SRYKMQNSKKGLLPYRY I LSKE
Sbjct: 302 MKYLGNAQYVLGIQIVRNEKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIDLSKE 361
Query: 61 QCPKTPQEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNI 120
QCPKTPQEVEDMSNIPYAS +GSLMYA+LCT+PDI YS+ IVSRYQSNPRRDHWT KNI
Sbjct: 362 QCPKTPQEVEDMSNIPYASAIGSLMYAMLCTRPDICYSVGIVSRYQSNPRRDHWTAVKNI 421
Query: 121 LKYLRRIKDYMLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSC 180
LKY RR KDYMLVYGS DLI TGYTDSDFQTDKDAR T GS+FTLNG VVWRSIKQSC
Sbjct: 422 LKYHRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTLGSVFTLNGAAVVWRSIKQSC 481
Query: 181 IVGSTMEAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGAVANS 228
I STMEA YVAACEA+KEAVWLKKFLTDLEVVPNMH+PITLYCDNSGAVANS
Sbjct: 482 IADSTMEAGYVAACEASKEAVWLKKFLTDLEVVPNMHLPITLYCDNSGAVANS 534
BLAST of Cmc11g0297741 vs. ExPASy TrEMBL
Match:
E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)
HSP 1 Score: 383.3 bits (983), Expect = 7.2e-103
Identity = 188/233 (80.69%), Postives = 206/233 (88.41%), Query Frame = 0
Query: 1 MKDLGNAQYVLGIQIVRNRKNSTLA--NPSHV----SRYKMQNSKKGLLPYRYAIHLSKE 60
MKDLG AQY+LGIQIVRNRKN TLA S++ SRYKMQNSKKG LP+R+ IHLSKE
Sbjct: 1028 MKDLGEAQYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKE 1087
Query: 61 QCPKTPQEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNI 120
QCPKTPQEVEDM NIPY+S VGSLMYA+LCT+PDI YS+ IVSRYQSNP RDHWT KNI
Sbjct: 1088 QCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNI 1147
Query: 121 LKYLRRIKDYMLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSC 180
LKYLRR ++YMLVYG+ DLI TGYTDSDFQ+DKDAR TSGS+FTLNGG VVWRS+KQ+C
Sbjct: 1148 LKYLRRTRNYMLVYGAKDLILTGYTDSDFQSDKDARKSTSGSVFTLNGGAVVWRSVKQTC 1207
Query: 181 IVGSTMEAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGAVANS 228
I STMEAEYVAACEAAKEAVWL+KFLTDLEVVPNMH+PITLYCDNSGAVANS
Sbjct: 1208 IADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGAVANS 1260
BLAST of Cmc11g0297741 vs. ExPASy TrEMBL
Match:
A0A5A7U2R8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001560 PE=4 SV=1)
HSP 1 Score: 378.3 bits (970), Expect = 2.3e-101
Identity = 191/233 (81.97%), Postives = 198/233 (84.98%), Query Frame = 0
Query: 1 MKDLGNAQYVLGIQIVRNRKNSTLA------NPSHVSRYKMQNSKKGLLPYRYAIHLSKE 60
MKDLGNAQYVLGIQIVRNRKN TLA +SRYKMQN KK LL YRY IHLSKE
Sbjct: 48 MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYMDKMLSRYKMQNFKKALLSYRYGIHLSKE 107
Query: 61 QCPKTPQEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNI 120
QCPKTPQEVEDMSNI YA VGSLMYA+LCT+PDI YS+ IVSRYQSNP RDHWT KNI
Sbjct: 108 QCPKTPQEVEDMSNISYAYAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAIKNI 167
Query: 121 LKYLRRIKDYMLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSC 180
LKYLRR KDYMLVYGS DLI GYTDSDFQTDKDAR TSGS+FTLNGG VVWRSIKQSC
Sbjct: 168 LKYLRRTKDYMLVYGSKDLILIGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSC 227
Query: 181 IVGSTMEAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGAVANS 228
I STME EYVAACEAAK+AVWLKKFLTDLE VPNMH+ ITLYCDNSGAVANS
Sbjct: 228 IADSTMEVEYVAACEAAKKAVWLKKFLTDLEGVPNMHLSITLYCDNSGAVANS 280
BLAST of Cmc11g0297741 vs. ExPASy TrEMBL
Match:
A0A5D3BX45 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00740 PE=4 SV=1)
HSP 1 Score: 378.3 bits (970), Expect = 2.3e-101
Identity = 189/233 (81.12%), Postives = 199/233 (85.41%), Query Frame = 0
Query: 1 MKDLGNAQYVLGIQIVRNRKNSTLA--NPSHV----SRYKMQNSKKGLLPYRYAIHLSKE 60
MKDLGNAQYVLG+QIVRNRKN TLA S++ SRYKM NSKKGLLPYRY IHLSKE
Sbjct: 452 MKDLGNAQYVLGVQIVRNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKE 511
Query: 61 QCPKTPQEVEDMSNIPYASTVGSLMYAILCTKPDIWYSIRIVSRYQSNPRRDHWTVAKNI 120
QCPKTPQEVEDMSNIPYAS VGSLMY +LCT+P+I YS+ IVSR QS P RDHWT KNI
Sbjct: 512 QCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICYSVGIVSRCQSKPGRDHWTTVKNI 571
Query: 121 LKYLRRIKDYMLVYGSMDLIFTGYTDSDFQTDKDARNFTSGSLFTLNGGVVVWRSIKQSC 180
LKYLRR KDYMLVYGS DLI TGYTD FQTDKDAR TSG +FT+NGG VVWRSIKQSC
Sbjct: 572 LKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNGGAVVWRSIKQSC 631
Query: 181 IVGSTMEAEYVAACEAAKEAVWLKKFLTDLEVVPNMHMPITLYCDNSGAVANS 228
I STMEAEYVA CEAAKEAVWLKKFLTDLEVVPNMH+P TLYCDNSGAV NS
Sbjct: 632 IADSTMEAEYVATCEAAKEAVWLKKFLTDLEVVPNMHLPFTLYCDNSGAVVNS 684
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| P10978 | 1.9e-47 | 42.61 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
| P04146 | 3.4e-25 | 31.51 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
| P0CV72 | 4.5e-25 | 42.96 | Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... | [more] |
| Q9ZT94 | 1.1e-18 | 29.39 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
| Q94HW2 | 3.8e-16 | 29.39 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7V4I1 | 5.5e-127 | 100.00 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G00598... | [more] |
| A0A5A7TV73 | 1.5e-103 | 83.26 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G0052... | [more] |
| E2GK51 | 7.2e-103 | 80.69 | Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1 | [more] |
| A0A5A7U2R8 | 2.3e-101 | 81.97 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G0015... | [more] |
| A0A5D3BX45 | 2.3e-101 | 81.12 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G007... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
