Cmc11g0297151 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0297151
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionASCH domain-containing protein
LocationCMiso1.1chr11: 16128799 .. 16131813 (-)
RNA-Seq ExpressionCmc11g0297151
SyntenyCmc11g0297151
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAATCTAGGTTTTGCTTGTACATTGCAGGTTCTAAAGACGGTAAACTTTGAGCTTCATGTTCAGAAGCCTTTCTTTACTCAGCTAAAAGGTAATTCTATTAGATTTTTTTTAACATTCTTAAGCTTGTGCTAGATGGTATTAAAAGTACTAAATATGTAAACAAGATCGTGCAAAAATCAAGCCTCTCTCTCACTCAAGAGCTCCAAGTACACAGCACACATCATACAAAAAACTCAATAACCAAGCAATGGCGCACAAAAAATGGGAATACCCCGTGACACCAACTCTGTTATCAAAGTATTTGCTACAAGAATAAAATCATGTCACTACCAAATGGGCTTTGCTTTTATACTGAACTCTGCACTAGGATACCTCTACCTCTTACTCATCTTTCTTTTAAGTAAAGGCTATTCTTACTCTTGACAGTTGAATTTTTTACCGTGTAAAGTCAACTAGTGTACTTCAACTACAAATAACCACAATAGCTTCCATTGTTTAAGAGAGGCTTAACATCTGAATACCTAACTGAGCATCTAGTGACTTGAATCAGTAACAAATGGCATGTCTATTGGCAATTTAGACACAATGTATAGACAAGATAGTATCCTTTTTTAGGAGTCTTGAATTCAAATTCCTTATGAATATTAATAGTTTACATGTCAGGTTTTGTAATCAAATTAAAATTTGAGTTCACTCCCATGAAGGTGAGAGTGTTAGTAATATAATAAAAGATATTAGCTTAAGCTTTTGGGTTCACTTTAGTAGTAGTTTTCTTGGGAATCTTTACTTGTTTATCTGTTGGTTTAGTGTTTTGATTTTTGACACTGATTTCTCTTGTGCAATATATAATTGGTTCTAGATGGCCTAAAGAGAGTGGAAGGAAGATGTGCTGCTGGTAATTACAATCGGTATTGTAAAGAACTTTCTCATTATAAAATTGCTTTCTTAGTTACAGTGTTGGAGACATTTGAGTTGCTATGGCTGTGAAACATTACATGGATTCTTTGTTGTTATTGGCTCGTTAATTTATAGTTTGGGGAGATAGTCTTGAACTAGACAAACCAACACAAATGTCAGAGTTGCAAGCAATTTTATTTCCCAATAATTTTTAACCATCTTCTTTGGTACAGAATTCAGTCTGGAGCGTTGATACTTTTCAATAAATGTTTGTTGTTTGAGGTTCAGGTATTAATTCCACAAAAATTCAAAACATTGACATTTCTACACTATTCATTATTTCCATACAAACTTCTGGATTGCTGTAGGATGTACGTCAATACCCTTCATTTTATGCGATGTTGAAAGCGGAGAGTCTTGATAACGTTCTTTCTGGAGTAAAAACATTAACAGATGGTAAGATAAAATACATATGTCTATAATTTTCGTTTCCTTAATATTTAATTATCTTGTTCATGATAATTCTTTAATATGAACTTTCTACTTGTTCTTTTGTTCTATAGAATTTTGACATGTCCTTCTTGCCTATTTATTTTTATTTTATAACGTAGTGGTTCTAAAAGATTATTTGCTTCGTGTACTTTATGACTTTGAAACATTATTTGTTAGTACCTTTTGAGGTCTTAAGAGCCATAAAGCAAGATAAAGATAATCAATAAGTTAAATATAAAGAAACTCGATAACAAACATTATGAAGCCATGATAAATATATTGAATATCATGACACTATTCCTAGTAAAATGTGGCAGCATGACAACCTTCTGGTTGGATTGTTAGAAGTGAAGTATGGTTGATAAAGGTGGAAAGATGCTCTCCTCTTTATTCATTTAACTCATACTTGCAGGCTGGTTAGGAAAGGGTAATATAAACTTGTGAATAATTTCCTTTATCAACAATTAAAGTTGTGAGACTGTCTTGTGAATGGAGAAGGTCATGAGTAAAAGTGGAATGGTGGAGGCATGCAAAATTATTTCAAATGGGGTAAAGAAAGAAATCTCATTCTGGAAGGAAGTATATTACCCATGCATGGACTAGGAAAGAAATGTGGAAAAGGGAATATTATCATGTGTAGATTGGTGATGACATTGAGGTTGAGTAAAAGAGTAGTTTTTTTTTTAAGACAGAATAGGAGAAGCAAGGTCTCAATATGATTAGATGGAAAACAGTTGTTGTTACCATATCTTTTCTTCATTTTTCTCATGAAACGTTAAAATGACAAAATCAGTTTTTGGTGTTAAACAACAGAGACATAGAATGATCCTAAGGTTCTAAAGCTCGCAAAAAATTCCTGCCTTTGCTAATTGGTGAAATGTAAAATGTGAGGGCAAATGTGTTTACTTATCGTAACCTCCTAAGGGAGTAGCAATGCTGATAGGGTATGATGGTTTTACTTTTCATATCGTAATCATACTGTGTTTCCACATATGGAAGCAAATGCCTGCCACATTAGGTCAGACAATTGGTTTGGCATATGAGGGGGCAAAATACTTTGAAAGGCAGGGACTGGTGACTTTCTTTTTCTTAGTCTTTTTCTTCTATTTTAATTTTTTTAATCCTTTCACGTAAAGTAGCTTTTCTTTCTCTTGAATCATAAGGTTTTTGTTTTCATTTTTATTCATCTCCAAGTATCAGCAGATAATGAAGTTACTATAACTGAGCTTTACTTTTCAGCTTATTGCGTTGATGTTGCTTATTTCTTTATAGATTGATATTGGTTTTCATAATAATGTTATGTAAAAAAATGTTGATTATTCATTTGGTGGGCAATATTAAGAACTTTTCATCCTTTTCTGCAATTTCAGTACTTCAAACAGCTTTGTTATTCATATAAATGGTTTGTTTGGATATTGTTTGTAGATAATTGAAGTGATATCGGGTTGAAAGCTAAGCGATTGTGTAGAAATGGTCAAGCGACCGTTGAAAATTGAAGACTGAGAAGGCATTTAGGATTTTTAATTATTTAATTCTTGTATTAGAATCTTTTTTCATGTACTATTGTAGAATGTATATATAAACATAATATTAATATTTTATTTTGTGTATTCAAATGTA

mRNA sequence

ATGTCTAATCTAGGTTTTGCTTGTACATTGCAGGTTCTAAAGACGGTAAACTTTGAGCTTCATGTTCAGAAGCCTTTCTTTACTCAGCTAAAAGATGGCCTAAAGAGAGTGGAAGGAAGATGTGCTGCTGGTAATTACAATCGAATTCAGTCTGGAGCGTTGATACTTTTCAATAAATGTTTGTTGTTTGAGGTTCAGGATGTACGTCAATACCCTTCATTTTATGCGATGTTGAAAGCGGAGAGTCTTGATAACGTTCTTTCTGGAGTAAAAACATTAACAGATGATAATTGAAGTGATATCGGGTTGAAAGCTAAGCGATTGTGTAGAAATGGTCAAGCGACCGTTGAAAATTGAAGACTGAGAAGGCATTTAGGATTTTTAATTATTTAATTCTTGTATTAGAATCTTTTTTCATGTACTATTGTAGAATGTATATATAAACATAATATTAATATTTTATTTTGTGTATTCAAATGTA

Coding sequence (CDS)

ATGTCTAATCTAGGTTTTGCTTGTACATTGCAGGTTCTAAAGACGGTAAACTTTGAGCTTCATGTTCAGAAGCCTTTCTTTACTCAGCTAAAAGATGGCCTAAAGAGAGTGGAAGGAAGATGTGCTGCTGGTAATTACAATCGAATTCAGTCTGGAGCGTTGATACTTTTCAATAAATGTTTGTTGTTTGAGGTTCAGGATGTACGTCAATACCCTTCATTTTATGCGATGTTGAAAGCGGAGAGTCTTGATAACGTTCTTTCTGGAGTAAAAACATTAACAGATGATAATTGA

Protein sequence

MSNLGFACTLQVLKTVNFELHVQKPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVLSGVKTLTDDN
Homology
BLAST of Cmc11g0297151 vs. NCBI nr
Match: XP_011653020.1 (uncharacterized protein LOC105434383 isoform X1 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 6.5e-39
Identity = 84/91 (92.31%), Postives = 86/91 (94.51%), Query Frame = 0

Query: 5   GFACTLQVLKTVNFELHVQKPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFE 64
           G A  + VLKTVNFELHVQ+PFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFE
Sbjct: 98  GRAELVNVLKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFE 157

Query: 65  VQDVRQYPSFYAMLKAESLDNVLSGVKTLTD 96
           VQDVRQYPSFYAMLKAESLDNVL GVKTLTD
Sbjct: 158 VQDVRQYPSFYAMLKAESLDNVLPGVKTLTD 188

BLAST of Cmc11g0297151 vs. NCBI nr
Match: XP_004152147.1 (uncharacterized protein LOC105434383 isoform X2 [Cucumis sativus] >KGN52990.1 hypothetical protein Csa_014567 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 6.5e-39
Identity = 84/91 (92.31%), Postives = 86/91 (94.51%), Query Frame = 0

Query: 5   GFACTLQVLKTVNFELHVQKPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFE 64
           G A  + VLKTVNFELHVQ+PFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFE
Sbjct: 98  GRAELVNVLKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFE 157

Query: 65  VQDVRQYPSFYAMLKAESLDNVLSGVKTLTD 96
           VQDVRQYPSFYAMLKAESLDNVL GVKTLTD
Sbjct: 158 VQDVRQYPSFYAMLKAESLDNVLPGVKTLTD 188

BLAST of Cmc11g0297151 vs. NCBI nr
Match: XP_031739613.1 (uncharacterized protein LOC105434383 isoform X3 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 6.5e-39
Identity = 84/91 (92.31%), Postives = 86/91 (94.51%), Query Frame = 0

Query: 5   GFACTLQVLKTVNFELHVQKPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFE 64
           G A  + VLKTVNFELHVQ+PFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFE
Sbjct: 98  GRAELVNVLKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFE 157

Query: 65  VQDVRQYPSFYAMLKAESLDNVLSGVKTLTD 96
           VQDVRQYPSFYAMLKAESLDNVL GVKTLTD
Sbjct: 158 VQDVRQYPSFYAMLKAESLDNVLPGVKTLTD 188

BLAST of Cmc11g0297151 vs. NCBI nr
Match: TYK29256.1 (RNA-binding ASCH domain protein, putative isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 169.1 bits (427), Expect = 1.9e-38
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0

Query: 12  VLKTVNFELHVQKPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQY 71
           VLKTVNFELHVQ+PFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQY
Sbjct: 51  VLKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQY 110

Query: 72  PSFYAMLKAESLDNVLSGVKTLTD 96
           PSFYAMLKAESLDNVL GVKTLTD
Sbjct: 111 PSFYAMLKAESLDNVLPGVKTLTD 134

BLAST of Cmc11g0297151 vs. NCBI nr
Match: TYK29648.1 (RNA-binding ASCH domain protein, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 169.1 bits (427), Expect = 1.9e-38
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0

Query: 12  VLKTVNFELHVQKPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQY 71
           VLKTVNFELHVQ+PFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQY
Sbjct: 103 VLKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQY 162

Query: 72  PSFYAMLKAESLDNVLSGVKTLTD 96
           PSFYAMLKAESLDNVL GVKTLTD
Sbjct: 163 PSFYAMLKAESLDNVLPGVKTLTD 186

BLAST of Cmc11g0297151 vs. ExPASy TrEMBL
Match: A0A0A0KTQ3 (ASCH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G010400 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.2e-39
Identity = 84/91 (92.31%), Postives = 86/91 (94.51%), Query Frame = 0

Query: 5   GFACTLQVLKTVNFELHVQKPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFE 64
           G A  + VLKTVNFELHVQ+PFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFE
Sbjct: 98  GRAELVNVLKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFE 157

Query: 65  VQDVRQYPSFYAMLKAESLDNVLSGVKTLTD 96
           VQDVRQYPSFYAMLKAESLDNVL GVKTLTD
Sbjct: 158 VQDVRQYPSFYAMLKAESLDNVLPGVKTLTD 188

BLAST of Cmc11g0297151 vs. ExPASy TrEMBL
Match: A0A5D3E021 (RNA-binding ASCH domain protein, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00180 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 9.2e-39
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0

Query: 12  VLKTVNFELHVQKPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQY 71
           VLKTVNFELHVQ+PFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQY
Sbjct: 51  VLKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQY 110

Query: 72  PSFYAMLKAESLDNVLSGVKTLTD 96
           PSFYAMLKAESLDNVL GVKTLTD
Sbjct: 111 PSFYAMLKAESLDNVLPGVKTLTD 134

BLAST of Cmc11g0297151 vs. ExPASy TrEMBL
Match: A0A5D3E1K2 (RNA-binding ASCH domain protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002640 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 9.2e-39
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0

Query: 12  VLKTVNFELHVQKPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQY 71
           VLKTVNFELHVQ+PFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQY
Sbjct: 103 VLKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQY 162

Query: 72  PSFYAMLKAESLDNVLSGVKTLTD 96
           PSFYAMLKAESLDNVL GVKTLTD
Sbjct: 163 PSFYAMLKAESLDNVLPGVKTLTD 186

BLAST of Cmc11g0297151 vs. ExPASy TrEMBL
Match: A0A6J1IYG9 (uncharacterized protein LOC111479615 OS=Cucurbita maxima OX=3661 GN=LOC111479615 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.0e-34
Identity = 77/91 (84.62%), Postives = 81/91 (89.01%), Query Frame = 0

Query: 5   GFACTLQVLKTVNFELHVQKPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFE 64
           G A  + VLKTVNFELHVQ+PFFTQLKDGLK VEGRCAAG+Y RIQ GALILFNKCLLFE
Sbjct: 106 GGAELVNVLKTVNFELHVQEPFFTQLKDGLKTVEGRCAAGDYIRIQPGALILFNKCLLFE 165

Query: 65  VQDVRQYPSFYAMLKAESLDNVLSGVKTLTD 96
           VQDVRQYPSF AML+AESLD VL GVKTLTD
Sbjct: 166 VQDVRQYPSFSAMLEAESLDKVLPGVKTLTD 196

BLAST of Cmc11g0297151 vs. ExPASy TrEMBL
Match: A0A6J1GV12 (uncharacterized protein LOC111457433 OS=Cucurbita moschata OX=3662 GN=LOC111457433 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.0e-34
Identity = 77/91 (84.62%), Postives = 81/91 (89.01%), Query Frame = 0

Query: 5   GFACTLQVLKTVNFELHVQKPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFE 64
           G A  + VLKTVNFELHVQ+PFFTQLKDGLK VEGRCAAG+Y RIQ GALILFNKCLLFE
Sbjct: 106 GGAELVNVLKTVNFELHVQEPFFTQLKDGLKTVEGRCAAGDYIRIQPGALILFNKCLLFE 165

Query: 65  VQDVRQYPSFYAMLKAESLDNVLSGVKTLTD 96
           VQDVRQYPSF AML+AESLD VL GVKTLTD
Sbjct: 166 VQDVRQYPSFSAMLEAESLDKVLPGVKTLTD 196

BLAST of Cmc11g0297151 vs. TAIR 10
Match: AT3G03320.1 (RNA-binding ASCH domain protein )

HSP 1 Score: 119.4 bits (298), Expect = 1.6e-27
Identity = 56/86 (65.12%), Postives = 67/86 (77.91%), Query Frame = 0

Query: 10  LQVLKTVNFELHVQKPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVR 69
           + +LK VNFELHVQ+P+FTQLKDGLK VEGRCA G+Y RI SG  +LFNKCLL EVQDV 
Sbjct: 99  INMLKEVNFELHVQEPYFTQLKDGLKTVEGRCAVGDYMRISSGDFLLFNKCLLLEVQDVH 158

Query: 70  QYPSFYAMLKAESLDNVLSGVKTLTD 96
           +Y SF  MLK E L  VL GV+++ +
Sbjct: 159 RYTSFSEMLKVEGLAKVLPGVESIEE 184

BLAST of Cmc11g0297151 vs. TAIR 10
Match: AT2G43465.1 (RNA-binding ASCH domain protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.0e-18
Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = 0

Query: 10  LQVLKTVNFELHVQKPFFTQLKDGLKRVEGRCAAGNYNRI-QSGALILFNKCLLFEVQDV 69
           +  LK V  EL VQ+P F+ +KDG+K VE RC    Y+RI + G++++ NKCL+FEV ++
Sbjct: 118 VNALKDVFSELQVQEPLFSLMKDGIKTVEARCFEEEYDRIRRGGSMVMINKCLMFEVLEL 177

Query: 70  RQYPSFYAMLKAESLDNVLSGVKTLTD 96
            QY SFY +LKAES + V  G KT+ +
Sbjct: 178 HQYASFYELLKAESSEKVFPGTKTVEE 204

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011653020.16.5e-3992.31uncharacterized protein LOC105434383 isoform X1 [Cucumis sativus][more]
XP_004152147.16.5e-3992.31uncharacterized protein LOC105434383 isoform X2 [Cucumis sativus] >KGN52990.1 hy... [more]
XP_031739613.16.5e-3992.31uncharacterized protein LOC105434383 isoform X3 [Cucumis sativus][more]
TYK29256.11.9e-3897.62RNA-binding ASCH domain protein, putative isoform 2 [Cucumis melo var. makuwa][more]
TYK29648.11.9e-3897.62RNA-binding ASCH domain protein, putative isoform 1 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KTQ33.2e-3992.31ASCH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G010400 PE=4 S... [more]
A0A5D3E0219.2e-3997.62RNA-binding ASCH domain protein, putative isoform 2 OS=Cucumis melo var. makuwa ... [more]
A0A5D3E1K29.2e-3997.62RNA-binding ASCH domain protein, putative isoform 1 OS=Cucumis melo var. makuwa ... [more]
A0A6J1IYG94.0e-3484.62uncharacterized protein LOC111479615 OS=Cucurbita maxima OX=3661 GN=LOC111479615... [more]
A0A6J1GV124.0e-3484.62uncharacterized protein LOC111457433 OS=Cucurbita moschata OX=3662 GN=LOC1114574... [more]
Match NameE-valueIdentityDescription
AT3G03320.11.6e-2765.12RNA-binding ASCH domain protein [more]
AT2G43465.11.0e-1848.28RNA-binding ASCH domain protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.130.30Hypothetical protein.coord: 16..96
e-value: 6.0E-27
score: 96.0
NoneNo IPR availablePANTHERPTHR34204RNA-BINDING ASCH DOMAIN PROTEINcoord: 10..94
NoneNo IPR availablePANTHERPTHR34204:SF3ASCH DOMAIN PROTEIN, PUTATIVE ISOFORM 1-RELATEDcoord: 10..94
IPR007374ASCH domainPFAMPF04266ASCHcoord: 20..82
e-value: 2.3E-4
score: 21.7
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 17..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0297151.1Cmc11g0297151.1mRNA